AL538_18170 24f48d2c9b72200b1124a552ded07752 754 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 128 198 4.3E-23 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 Pfam PF03477 ATP cone domain 1 86 9.2E-13 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 567 589 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 SUPERFAMILY SSF48168 6 201 5.36E-58 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 SUPERFAMILY SSF51998 202 737 5.19E-186 T 11-10-2018 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 447 470 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 485 507 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 578 605 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 410 421 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 280 299 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 PRINTS PR01183 Ribonucleotide reductase large chain signature 513 536 3.5E-60 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 Pfam PF02867 Ribonucleotide reductase, barrel domain 203 724 2.4E-186 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 Gene3D G3DSA:3.20.70.20 71 735 1.7E-281 T 11-10-2018 AL538_18170 24f48d2c9b72200b1124a552ded07752 754 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 132 728 3.9E-213 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.6E-126 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Gene3D G3DSA:1.10.1160.10 261 339 1.0E-35 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.901 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 SUPERFAMILY SSF50715 340 548 4.97E-80 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 SUPERFAMILY SSF52374 11 337 1.69E-103 T 11-10-2018 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 9.8E-298 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Gene3D G3DSA:3.40.50.620 30 247 6.0E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Gene3D G3DSA:2.40.240.10 348 463 9.3E-47 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Gene3D G3DSA:3.90.800.10 101 209 6.0E-106 T 11-10-2018 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.1E-63 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 Gene3D G3DSA:2.40.240.10 464 548 1.9E-33 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13675 b47ff8ff558c29c620d06f697e190850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 11-10-2018 IPR018215 ClpP, Ser active site AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 3.5E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 3.5E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 3.5E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 3.5E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 3.5E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 SUPERFAMILY SSF52096 23 206 1.24E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 11-10-2018 IPR033135 ClpP, histidine active site AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 Pfam PF00574 Clp protease 25 205 1.3E-89 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 Gene3D G3DSA:3.90.226.10 5 207 7.2E-85 T 11-10-2018 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.43 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_14250 3c419f073e7ff78b66c9a24a2284abeb 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 5.6E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 Gene3D G3DSA:3.30.540.10 4 198 1.1E-76 T 11-10-2018 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.116 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.5E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 SUPERFAMILY SSF56655 3 331 2.11E-114 T 11-10-2018 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PIRSF PIRSF500210 1 336 3.2E-129 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 Gene3D G3DSA:3.40.190.80 200 336 2.3E-60 T 11-10-2018 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 PIRSF PIRSF000904 2 337 3.0E-126 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_11090 03eeec6cc04f9d88efe4cf297d25b994 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 SUPERFAMILY SSF52964 29 181 9.68E-42 T 11-10-2018 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Gene3D G3DSA:2.120.10.30 185 450 8.3E-98 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Gene3D G3DSA:3.40.50.10070 23 184 1.8E-49 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Pfam PF04052 TolB amino-terminal domain 24 126 1.9E-35 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 SUPERFAMILY SSF69304 176 448 8.24E-57 T 11-10-2018 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 52.818 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 2.1E-169 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 2.9E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 7.7E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL538_14960 6c498b1d4f217206e1efa28c12f4ec99 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.759 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 Gene3D G3DSA:2.40.50.140 3 105 6.3E-20 T 11-10-2018 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 SUPERFAMILY SSF55681 97 464 1.1E-95 T 11-10-2018 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 SUPERFAMILY SSF50249 16 101 4.71E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 5.6E-12 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.9E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 Gene3D G3DSA:3.30.930.10 109 465 3.6E-109 T 11-10-2018 AL538_03030 136cec9ed2234bec37d68a74b1d7cd2d 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 4.9E-207 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AL538_18120 0d793db539e33e61e82d12e40fb730a5 217 SUPERFAMILY SSF55469 1 216 7.33E-65 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_18120 0d793db539e33e61e82d12e40fb730a5 217 Pfam PF00881 Nitroreductase family 8 193 8.0E-26 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_18120 0d793db539e33e61e82d12e40fb730a5 217 Gene3D G3DSA:3.40.109.10 1 217 3.2E-61 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_17120 559e0291372d8bfbdfda808e6a389c44 399 SUPERFAMILY SSF53448 60 328 3.84E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_17120 559e0291372d8bfbdfda808e6a389c44 399 Gene3D G3DSA:3.90.550.10 39 277 3.9E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_17120 559e0291372d8bfbdfda808e6a389c44 399 Pfam PF13641 Glycosyltransferase like family 2 61 280 2.1E-13 T 11-10-2018 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Gene3D G3DSA:1.10.490.10 1 143 4.4E-51 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 1.1E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.8E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 SUPERFAMILY SSF52343 255 393 9.3E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 8.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 8.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 8.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 8.0E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Gene3D G3DSA:3.40.50.80 256 394 1.0E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Pfam PF00042 Globin 8 102 7.1E-14 T 11-10-2018 IPR000971 Globin GO:0020037 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Gene3D G3DSA:2.40.30.10 149 254 3.0E-32 T 11-10-2018 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.626 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.1E-13 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL538_08060 1a3ded2596e83035429863b6e95697d9 394 SUPERFAMILY SSF63380 148 253 1.45E-28 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_08060 1a3ded2596e83035429863b6e95697d9 394 SUPERFAMILY SSF46458 1 142 1.26E-37 T 11-10-2018 IPR009050 Globin-like superfamily AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 3.6E-50 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Gene3D G3DSA:3.30.1390.30 87 162 4.5E-53 T 11-10-2018 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 SUPERFAMILY SSF56519 58 254 3.92E-55 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Gene3D G3DSA:3.90.1310.10 66 250 4.5E-53 T 11-10-2018 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 5.1E-78 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Gene3D G3DSA:3.40.710.10 251 633 3.3E-94 T 11-10-2018 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 6.6E-240 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 SUPERFAMILY SSF56601 256 620 5.09E-97 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_13070 6efaee081ce036a349c93fb371bdf3b3 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.477 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.2090.10 179 269 1.9E-220 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 2.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82714 686 768 9.68E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82693 141 320 9.94E-5 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82693 47 126 9.42E-17 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82714 182 258 3.27E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82866 290 483 6.41E-36 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.70.1430 549 635 1.9E-220 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:1.20.1640.10 495 989 1.9E-220 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.70.1320 136 322 1.9E-220 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 SUPERFAMILY SSF82866 772 995 5.75E-41 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.70.1440 636 832 1.9E-220 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Pfam PF00873 AcrB/AcrD/AcrF family 10 991 2.1E-153 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.2090.10 687 774 1.9E-220 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:1.20.1640.10 11 494 1.9E-220 T 11-10-2018 AL538_16865 13ce411ab15a25ecad75e01e6b479388 1015 Gene3D G3DSA:3.30.70.1430 41 782 1.9E-220 T 11-10-2018 AL538_10340 4e855a359d738be846fa091f3aa92430 773 Gene3D G3DSA:3.30.420.140 325 451 6.6E-157 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AL538_10340 4e855a359d738be846fa091f3aa92430 773 Gene3D G3DSA:1.10.3500.10 112 498 6.6E-157 T 11-10-2018 IPR023323 Tex-like domain superfamily AL538_10340 4e855a359d738be846fa091f3aa92430 773 SMART SM00732 326 424 2.5E-38 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL538_10340 4e855a359d738be846fa091f3aa92430 773 SUPERFAMILY SSF47781 560 632 6.23E-19 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_10340 4e855a359d738be846fa091f3aa92430 773 Gene3D G3DSA:1.10.150.310 499 630 8.9E-50 T 11-10-2018 AL538_10340 4e855a359d738be846fa091f3aa92430 773 Pfam PF00575 S1 RNA binding domain 649 720 7.4E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_10340 4e855a359d738be846fa091f3aa92430 773 SUPERFAMILY SSF158832 3 321 1.7E-120 T 11-10-2018 AL538_10340 4e855a359d738be846fa091f3aa92430 773 SMART SM00316 649 720 1.2E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_10340 4e855a359d738be846fa091f3aa92430 773 SUPERFAMILY SSF50249 638 723 2.09E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_10340 4e855a359d738be846fa091f3aa92430 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_10340 4e855a359d738be846fa091f3aa92430 773 Pfam PF09371 Tex-like protein N-terminal domain 9 191 1.5E-71 T 11-10-2018 IPR018974 Tex-like protein, N-terminal AL538_10340 4e855a359d738be846fa091f3aa92430 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 11-10-2018 AL538_10340 4e855a359d738be846fa091f3aa92430 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_10340 4e855a359d738be846fa091f3aa92430 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.9E-56 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain AL538_10340 4e855a359d738be846fa091f3aa92430 773 Gene3D G3DSA:2.40.50.140 631 726 3.2E-29 T 11-10-2018 AL538_10340 4e855a359d738be846fa091f3aa92430 773 Gene3D G3DSA:1.10.10.650 2 109 3.0E-42 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily AL538_06085 d314c95f131437aadffbce22dfad0df0 257 SUPERFAMILY SSF51556 1 253 9.73E-77 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_06085 d314c95f131437aadffbce22dfad0df0 257 PIRSF PIRSF005902 1 257 2.2E-66 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_06085 d314c95f131437aadffbce22dfad0df0 257 Gene3D G3DSA:3.20.20.140 1 255 1.2E-81 T 11-10-2018 AL538_06085 d314c95f131437aadffbce22dfad0df0 257 Pfam PF01026 TatD related DNase 4 253 1.9E-64 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_06085 d314c95f131437aadffbce22dfad0df0 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL538_06085 d314c95f131437aadffbce22dfad0df0 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Gene3D G3DSA:3.30.2130.30 6 255 5.7E-137 T 11-10-2018 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 11-10-2018 IPR000241 Putative RNA methylase domain AL538_00855 19b077fd3c652d3f844612913fea6b47 707 SMART SM00981 56 154 1.6E-19 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 SUPERFAMILY SSF53335 140 371 3.52E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Gene3D G3DSA:3.40.50.150 169 371 5.7E-137 T 11-10-2018 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Pfam PF02926 THUMP domain 30 153 7.2E-14 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 4.9E-28 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 4.2E-62 T 11-10-2018 IPR000241 Putative RNA methylase domain AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Gene3D G3DSA:3.30.750.80 396 487 3.2E-35 T 11-10-2018 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Gene3D G3DSA:3.40.50.150 488 706 3.1E-74 T 11-10-2018 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.618 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 SUPERFAMILY SSF53335 399 707 3.03E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_00855 19b077fd3c652d3f844612913fea6b47 707 PIRSF PIRSF037618 1 707 2.0E-296 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 314 9.0E-5 T 11-10-2018 AL538_00855 19b077fd3c652d3f844612913fea6b47 707 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 9.0E-5 T 11-10-2018 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.615 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 Gene3D G3DSA:3.90.1260.10 68 356 5.4E-145 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 Gene3D G3DSA:3.40.50.620 9 177 5.4E-145 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 Gene3D G3DSA:1.20.5.470 368 403 1.8E-8 T 11-10-2018 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 SUPERFAMILY SSF69864 177 402 2.49E-87 T 11-10-2018 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.3E-136 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 Pfam PF00764 Arginosuccinate synthase 10 396 4.5E-146 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07820 8b943e756f3570a7f94854ade5e85b35 404 SUPERFAMILY SSF52402 7 170 1.12E-47 T 11-10-2018 AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.3E-45 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 SUPERFAMILY SSF55048 128 197 1.31E-18 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 Gene3D G3DSA:3.30.70.250 125 197 3.2E-108 T 11-10-2018 AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 PIRSF PIRSF000446 1 307 2.0E-136 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 1.8E-127 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 SUPERFAMILY SSF52151 4 305 4.45E-82 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 Pfam PF00698 Acyl transferase domain 7 291 2.3E-38 T 11-10-2018 IPR014043 Acyl transferase AL538_03900 74a57aae08c2787b685bd96caf03ceee 307 Gene3D G3DSA:3.40.366.10 7 286 3.2E-108 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.1E-124 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 PIRSF PIRSF000732 1 574 2.7E-219 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Gene3D G3DSA:1.10.274.10 21 146 1.6E-80 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Gene3D G3DSA:3.50.30.10 4 233 1.6E-80 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 SUPERFAMILY SSF47831 24 143 2.48E-33 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Gene3D G3DSA:3.20.20.60 234 574 1.3E-125 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.9E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 SUPERFAMILY SSF51621 249 549 3.14E-110 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 7.6E-33 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 SUPERFAMILY SSF52009 125 243 1.96E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 11-10-2018 AL538_13510 88b8da9a994c66c7c3051efdad377046 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.9E-248 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SUPERFAMILY SSF46689 92 139 7.62E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Pfam PF06029 AlkA N-terminal domain 201 312 4.6E-32 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Gene3D G3DSA:1.10.340.30 313 413 1.7E-18 T 11-10-2018 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SMART SM01009 200 312 7.5E-32 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Gene3D G3DSA:3.40.10.10 4 79 4.8E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SUPERFAMILY SSF55945 201 293 4.08E-25 T 11-10-2018 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Gene3D G3DSA:1.10.10.60 86 194 2.2E-24 T 11-10-2018 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SMART SM00342 106 189 7.6E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Pfam PF02805 Metal binding domain of Ada 14 77 2.9E-29 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Pfam PF12833 Helix-turn-helix domain 112 190 3.0E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Gene3D G3DSA:3.30.310.20 201 312 2.6E-23 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SUPERFAMILY SSF57884 7 91 7.45E-34 T 11-10-2018 IPR035451 Ada-like domain superfamily AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SUPERFAMILY SSF46689 144 191 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 Gene3D G3DSA:1.10.1670.10 415 455 3.2E-6 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL538_19025 1e7f58a0debdcbba420df44d200bae76 455 SUPERFAMILY SSF48150 303 452 7.5E-29 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 2.8E-93 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 Gene3D G3DSA:3.20.20.140 1 255 6.9E-99 T 11-10-2018 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 SUPERFAMILY SSF51556 1 253 1.46E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 PIRSF PIRSF005902 1 255 2.9E-81 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AL538_03860 02a66bbf319c48fc735f5c6bd54fede7 255 Pfam PF01026 TatD related DNase 3 253 1.8E-78 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Gene3D G3DSA:1.20.140.160 131 283 1.0E-14 T 11-10-2018 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Gene3D G3DSA:1.20.120.1810 11 122 1.0E-26 T 11-10-2018 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 5.0E-126 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 SUPERFAMILY SSF88659 198 281 2.24E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 9.0E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.939 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 Pfam PF04545 Sigma-70, region 4 229 279 7.7E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_08980 9c3fcdb7bcbc23c7022791ea1e5a73af 285 SUPERFAMILY SSF88946 11 122 7.22E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_19420 8ee424b470e4dc256dbd627477eac12d 405 Pfam PF13614 AAA domain 110 295 2.0E-22 T 11-10-2018 IPR025669 AAA domain AL538_19420 8ee424b470e4dc256dbd627477eac12d 405 Gene3D G3DSA:1.10.1660.30 36 102 3.9E-6 T 11-10-2018 AL538_19420 8ee424b470e4dc256dbd627477eac12d 405 SUPERFAMILY SSF52540 108 366 1.2E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19420 8ee424b470e4dc256dbd627477eac12d 405 Gene3D G3DSA:3.40.50.300 107 397 5.2E-56 T 11-10-2018 AL538_23385 b8747d3104244e12940ad0b299eade78 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 3.9E-12 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_23385 b8747d3104244e12940ad0b299eade78 150 SUPERFAMILY SSF46785 10 67 7.52E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23385 b8747d3104244e12940ad0b299eade78 150 SUPERFAMILY SSF54909 75 149 1.11E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_23385 b8747d3104244e12940ad0b299eade78 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_23385 b8747d3104244e12940ad0b299eade78 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_23385 b8747d3104244e12940ad0b299eade78 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_23385 b8747d3104244e12940ad0b299eade78 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.9E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_23385 b8747d3104244e12940ad0b299eade78 150 SMART SM00344 10 116 1.2E-25 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_23385 b8747d3104244e12940ad0b299eade78 150 Gene3D G3DSA:3.30.70.920 74 146 9.6E-15 T 11-10-2018 AL538_23385 b8747d3104244e12940ad0b299eade78 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_23385 b8747d3104244e12940ad0b299eade78 150 Gene3D G3DSA:1.10.10.10 3 63 7.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 SMART SM00260 17 153 2.9E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 Gene3D G3DSA:3.40.50.2300 180 308 2.8E-25 T 11-10-2018 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 SUPERFAMILY SSF52172 183 306 1.85E-25 T 11-10-2018 IPR011006 CheY-like superfamily AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 SMART SM00448 182 302 1.9E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 Pfam PF00072 Response regulator receiver domain 184 302 2.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 SUPERFAMILY SSF50341 16 157 7.98E-36 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 Gene3D G3DSA:2.40.50.180 39 153 2.0E-28 T 11-10-2018 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 PIRSF PIRSF002867 1 308 6.8E-103 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 Pfam PF01584 CheW-like domain 21 155 1.6E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_13425 1a19a69157c2a1d4bab426348dad3822 308 Gene3D G3DSA:2.30.30.40 23 147 2.0E-28 T 11-10-2018 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 SUPERFAMILY SSF53901 266 390 3.79E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.34 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 Gene3D G3DSA:3.40.47.10 138 385 2.0E-151 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.8E-142 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 PIRSF PIRSF000429 2 391 3.4E-133 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 2.3E-83 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 SUPERFAMILY SSF53901 4 263 1.75E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.3E-240 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 2.0E-49 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL538_09765 eaf02242c657ff234098ecee02b0496e 391 Gene3D G3DSA:3.40.47.10 8 271 2.0E-151 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 Pfam PF03466 LysR substrate binding domain 90 291 6.2E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 SUPERFAMILY SSF53850 90 294 3.08E-34 T 11-10-2018 AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 Gene3D G3DSA:3.40.190.290 90 291 6.8E-50 T 11-10-2018 AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 Gene3D G3DSA:1.10.10.10 1 87 2.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16780 fcfdffd5ce18e9da9870345623ea2739 312 SUPERFAMILY SSF46785 3 111 9.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23715 b537dfd8fb48b0ce5180f104dd5515e7 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 9 101 2.5E-35 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AL538_23715 b537dfd8fb48b0ce5180f104dd5515e7 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 8.7E-16 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AL538_19130 7a6200402f5c9adfd50340a940d1ec78 130 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 121 1.2E-16 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL538_19130 7a6200402f5c9adfd50340a940d1ec78 130 SUPERFAMILY SSF54534 47 123 8.37E-16 T 11-10-2018 AL538_19130 7a6200402f5c9adfd50340a940d1ec78 130 PIRSF PIRSF006092 1 125 5.2E-24 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL538_19130 7a6200402f5c9adfd50340a940d1ec78 130 Gene3D G3DSA:3.10.50.30 43 130 1.5E-22 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL538_19130 7a6200402f5c9adfd50340a940d1ec78 130 Pfam PF14760 Rnk N-terminus 4 42 5.6E-7 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 11-10-2018 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 11-10-2018 AL538_10950 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_01660 3bbf605428472ea8f15e7f05e14a2ef2 376 Gene3D G3DSA:2.60.120.10 65 167 2.6E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01660 3bbf605428472ea8f15e7f05e14a2ef2 376 Pfam PF04209 homogentisate 1,2-dioxygenase 85 374 3.9E-22 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AL538_01660 3bbf605428472ea8f15e7f05e14a2ef2 376 SUPERFAMILY SSF51182 66 374 7.88E-91 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_06235 2a3c3973a2ff3b11fe95ba8f83639043 336 Gene3D G3DSA:2.40.160.10 22 336 8.2E-63 T 11-10-2018 IPR023614 Porin domain superfamily AL538_06235 2a3c3973a2ff3b11fe95ba8f83639043 336 Pfam PF13609 Gram-negative porin 10 300 1.3E-27 T 11-10-2018 AL538_06235 2a3c3973a2ff3b11fe95ba8f83639043 336 SUPERFAMILY SSF56935 22 336 5.49E-54 T 11-10-2018 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 SUPERFAMILY SSF50104 4 102 6.45E-34 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 1.1E-22 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 Gene3D G3DSA:2.30.30.30 2 104 1.4E-39 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 11-10-2018 IPR005824 KOW AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.2E-40 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10880 66f8c0e8dcfde5355e0ad79ff25dde83 105 SMART SM00739 4 31 3.4E-4 T 11-10-2018 IPR005824 KOW AL538_24430 b6a617e6934b9155519390e9a34558fd 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 6.6E-61 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL538_24430 b6a617e6934b9155519390e9a34558fd 156 SUPERFAMILY SSF102114 23 125 2.88E-8 T 11-10-2018 AL538_24430 b6a617e6934b9155519390e9a34558fd 156 Gene3D G3DSA:3.20.20.70 2 156 1.4E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_24430 b6a617e6934b9155519390e9a34558fd 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.5E-51 T 11-10-2018 AL538_24430 b6a617e6934b9155519390e9a34558fd 156 PIRSF PIRSF000368 1 156 3.7E-59 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 AL538_24430 b6a617e6934b9155519390e9a34558fd 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 Gene3D G3DSA:3.40.1550.10 139 328 3.4E-30 T 11-10-2018 IPR028976 CheC-like superfamily AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 SMART SM00448 3 115 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 Pfam PF00072 Response regulator receiver domain 5 115 7.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 Gene3D G3DSA:3.40.50.2300 2 126 8.8E-29 T 11-10-2018 AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 SUPERFAMILY SSF52172 4 120 3.56E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_26060 225dcd5d32f9715b5f33b1d4b4254e1d 334 SUPERFAMILY SSF103039 140 329 1.03E-37 T 11-10-2018 IPR028976 CheC-like superfamily AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 SUPERFAMILY SSF56784 4 264 8.41E-67 T 11-10-2018 IPR036412 HAD-like superfamily AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.9E-50 T 11-10-2018 IPR000150 Cof family GO:0016787 AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 Gene3D G3DSA:3.30.1240.10 85 190 3.3E-78 T 11-10-2018 AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 1.4E-20 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 Gene3D G3DSA:3.40.50.1000 9 260 3.3E-78 T 11-10-2018 IPR023214 HAD superfamily AL538_18790 5121d0cd7b0feb2ec756c2c5e85cdc53 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 6.2E-60 T 11-10-2018 AL538_07040 849d00c0bf12ec0a8f847528a0f5519a 342 SUPERFAMILY SSF53335 106 316 1.53E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_07040 849d00c0bf12ec0a8f847528a0f5519a 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 1.6E-13 T 11-10-2018 IPR000241 Putative RNA methylase domain AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Pfam PF00089 Trypsin 34 258 4.6E-51 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 2.8E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.8E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.8E-13 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 SUPERFAMILY SSF50494 13 265 2.26E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 SMART SM00020 33 260 1.0E-61 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Gene3D G3DSA:2.40.10.10 34 254 3.4E-61 T 11-10-2018 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Gene3D G3DSA:2.10.10.20 389 433 1.6E-15 T 11-10-2018 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Gene3D G3DSA:2.60.40.10 274 383 4.6E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Gene3D G3DSA:2.10.10.20 453 503 2.0E-5 T 11-10-2018 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 SUPERFAMILY SSF51055 378 436 3.53E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 SMART SM00495 459 510 2.5E-4 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 SMART SM00495 390 435 1.9E-8 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_17050 62268760ead88abe4ff2ecc961cc5c63 514 Gene3D G3DSA:2.40.10.10 46 255 3.4E-61 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 2.6E-55 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 SUPERFAMILY SSF51905 1 312 5.78E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 Gene3D G3DSA:3.50.50.60 111 436 3.4E-150 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 6.6E-22 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.6E-22 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 6.6E-22 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.6E-22 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 Gene3D G3DSA:3.50.50.60 2 336 3.4E-150 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 5.1E-17 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 SUPERFAMILY SSF55424 319 438 1.62E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 7.8E-16 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 7.8E-16 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 7.8E-16 T 11-10-2018 AL538_03470 f40cdefca85600e559b64cbfc9e404fb 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 7.8E-16 T 11-10-2018 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 SUPERFAMILY SSF46609 1 90 1.83E-29 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PIRSF PIRSF000349 1 202 2.4E-79 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 Gene3D G3DSA:2.40.500.20 84 201 1.3E-47 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 1.5E-39 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 2.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 2.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 2.7E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 4.2E-26 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 Gene3D G3DSA:1.10.287.990 20 83 1.5E-23 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08380 7d6159cfd8704ae7c91ce3c8887217e4 202 SUPERFAMILY SSF54719 84 200 1.57E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_08460 6bd3ff36e41611f5c6564f4acacba52f 210 SMART SM00479 29 202 1.2E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_08460 6bd3ff36e41611f5c6564f4acacba52f 210 Gene3D G3DSA:3.30.420.10 23 201 5.9E-34 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_08460 6bd3ff36e41611f5c6564f4acacba52f 210 SUPERFAMILY SSF53098 27 198 4.22E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_08460 6bd3ff36e41611f5c6564f4acacba52f 210 Pfam PF00929 Exonuclease 31 193 4.7E-20 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_26135 d45c0bcfcfdc5b86616505cda39c979e 333 Gene3D G3DSA:3.40.50.1360 60 325 1.8E-79 T 11-10-2018 AL538_26135 d45c0bcfcfdc5b86616505cda39c979e 333 Pfam PF04198 Putative sugar-binding domain 66 320 1.5E-76 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 AL538_26135 d45c0bcfcfdc5b86616505cda39c979e 333 Gene3D G3DSA:1.10.10.60 9 59 1.1E-18 T 11-10-2018 AL538_26135 d45c0bcfcfdc5b86616505cda39c979e 333 SUPERFAMILY SSF100950 70 320 1.84E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_15995 754948976cce5344b85222ed1021eebd 139 Pfam PF04024 PspC domain 14 72 4.4E-15 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AL538_15995 754948976cce5344b85222ed1021eebd 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 4.2E-48 T 11-10-2018 IPR014320 Phage shock protein, PspC AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:2.40.270.10 1035 1241 8.7E-88 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1110.10 157 262 1.9E-27 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.271 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1110.10 300 441 7.7E-35 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:2.40.50.100 714 788 3.4E-32 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.0E-57 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 3.9E-21 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 6.5E-157 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 6.7E-17 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 1.7E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1100.10 442 611 2.7E-65 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 11-10-2018 AL538_08655 103380558e71287722c04a97e5fba07c 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 669 4.4E-23 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 625 641 4.4E-23 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 685 710 4.4E-23 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 508 526 4.4E-23 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 190 1.4E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 619 734 5.6E-32 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 211 345 3.6E-25 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 163 177 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 550 561 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 582 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 689 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 672 9.7E-40 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 667 7.0E-22 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 SUPERFAMILY SSF56784 324 761 2.54E-56 T 11-10-2018 IPR036412 HAD-like superfamily AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Gene3D G3DSA:2.70.150.10 17 229 3.1E-293 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 73 8.2E-21 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Gene3D G3DSA:3.40.50.1000 323 698 3.1E-293 T 11-10-2018 IPR023214 HAD superfamily AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Gene3D G3DSA:1.20.1110.10 56 905 3.1E-293 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 SMART SM00831 4 78 6.7E-30 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Gene3D G3DSA:3.40.1110.10 336 557 3.1E-293 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 SUPERFAMILY SSF81665 3 909 1.44E-121 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Pfam PF00689 Cation transporting ATPase, C-terminus 741 909 4.7E-45 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 SUPERFAMILY SSF81660 332 562 8.07E-43 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 Pfam PF00122 E1-E2 ATPase 113 306 1.5E-49 T 11-10-2018 AL538_14475 bb83d35e0d2c9ddb2c3415f4346b39c6 917 SUPERFAMILY SSF81653 116 226 9.15E-29 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL538_01785 285a6afd7675befcee70598765e5c049 304 Gene3D G3DSA:3.20.20.70 1 296 2.5E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_01785 285a6afd7675befcee70598765e5c049 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 8.5E-61 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_01785 285a6afd7675befcee70598765e5c049 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.1E-10 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_01785 285a6afd7675befcee70598765e5c049 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.1E-10 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_01785 285a6afd7675befcee70598765e5c049 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.1E-10 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_01785 285a6afd7675befcee70598765e5c049 304 SUPERFAMILY SSF51569 4 291 5.86E-85 T 11-10-2018 AL538_01785 285a6afd7675befcee70598765e5c049 304 PIRSF PIRSF001365 1 301 8.2E-84 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_01785 285a6afd7675befcee70598765e5c049 304 SMART SM01130 4 293 1.5E-94 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_06420 4e2f2aee50240c4bd062a5a21b78594e 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.2E-46 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_06420 4e2f2aee50240c4bd062a5a21b78594e 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.0E-38 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_06420 4e2f2aee50240c4bd062a5a21b78594e 161 SUPERFAMILY SSF55083 1 159 1.01E-54 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_06420 4e2f2aee50240c4bd062a5a21b78594e 161 Gene3D G3DSA:3.30.70.560 1 159 8.8E-60 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_06420 4e2f2aee50240c4bd062a5a21b78594e 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_10945 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10945 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL538_10945 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 11-10-2018 AL538_10945 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AL538_10945 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_10945 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10945 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL538_10945 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 11-10-2018 AL538_10945 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10945 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 PIRSF PIRSF000090 1 249 4.1E-81 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 SUPERFAMILY SSF52402 2 242 1.47E-81 T 11-10-2018 AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 Gene3D G3DSA:3.40.50.620 1 248 8.6E-83 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 Pfam PF01012 Electron transfer flavoprotein domain 26 204 3.4E-47 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL538_25350 0699467b4545f19f1bc48ea0ccc26251 249 SMART SM00893 23 211 3.8E-63 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 4.0E-206 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 SUPERFAMILY SSF109604 351 489 5.65E-12 T 11-10-2018 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 Pfam PF05746 DALR anticodon binding domain 580 677 4.2E-10 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.0E-296 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09725 1ff67897ed117191a01a7462d55cd31f 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.956 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 4.1E-16 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Gene3D G3DSA:3.10.20.590 796 856 1.2E-24 T 11-10-2018 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 11-10-2018 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 SUPERFAMILY SSF47323 660 856 6.54E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 7.3E-79 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 11-10-2018 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 SUPERFAMILY SSF50677 226 414 3.87E-56 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 1.9E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.1E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.7E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.417 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_13095 34c7b780bc37f41b5d34e16e5e86fa53 857 SUPERFAMILY SSF52374 4 666 6.84E-147 T 11-10-2018 AL538_01840 ec1ad170c39e058a39aff6133a032c8e 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_01840 ec1ad170c39e058a39aff6133a032c8e 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_01840 ec1ad170c39e058a39aff6133a032c8e 156 SUPERFAMILY SSF54523 6 69 1.57E-12 T 11-10-2018 AL538_01840 ec1ad170c39e058a39aff6133a032c8e 156 Gene3D G3DSA:3.30.700.10 6 153 1.4E-12 T 11-10-2018 AL538_01840 ec1ad170c39e058a39aff6133a032c8e 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.5E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_24885 7bcdcd9b8bff9005fc865ba9f4532054 265 PIRSF PIRSF029288 1 265 1.1E-78 T 11-10-2018 IPR009211 Predicted virulence protein, SciE type AL538_24885 7bcdcd9b8bff9005fc865ba9f4532054 265 Gene3D G3DSA:1.25.40.10 1 86 3.8E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_24885 7bcdcd9b8bff9005fc865ba9f4532054 265 Pfam PF07024 ImpE protein 142 258 3.4E-31 T 11-10-2018 IPR009211 Predicted virulence protein, SciE type AL538_24885 7bcdcd9b8bff9005fc865ba9f4532054 265 SUPERFAMILY SSF144059 3 259 1.44E-77 T 11-10-2018 AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 SUPERFAMILY SSF46785 7 78 1.44E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 SMART SM00895 99 228 5.2E-17 T 11-10-2018 IPR011711 GntR, C-terminal AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 67 2.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 Gene3D G3DSA:1.20.120.530 96 240 3.8E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 SMART SM00345 13 74 9.0E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 SUPERFAMILY SSF48008 97 233 1.57E-20 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 Pfam PF07729 FCD domain 99 226 3.2E-19 T 11-10-2018 IPR011711 GntR, C-terminal AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 9.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15455 a69000ba4bb8c2068d1b1d221420f26e 248 Gene3D G3DSA:1.10.10.10 6 76 1.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15645 45a348ad85448eaeceda0397806b7fed 374 SMART SM01002 149 297 4.1E-87 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL538_15645 45a348ad85448eaeceda0397806b7fed 374 SUPERFAMILY SSF52283 1 360 2.38E-67 T 11-10-2018 AL538_15645 45a348ad85448eaeceda0397806b7fed 374 Gene3D G3DSA:3.40.50.720 130 305 1.3E-136 T 11-10-2018 AL538_15645 45a348ad85448eaeceda0397806b7fed 374 SUPERFAMILY SSF51735 137 303 4.12E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15645 45a348ad85448eaeceda0397806b7fed 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 4.2E-46 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL538_15645 45a348ad85448eaeceda0397806b7fed 374 SMART SM01003 4 137 3.7E-79 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL538_15645 45a348ad85448eaeceda0397806b7fed 374 Gene3D G3DSA:3.40.50.720 3 353 1.3E-136 T 11-10-2018 AL538_15645 45a348ad85448eaeceda0397806b7fed 374 PIRSF PIRSF000183 1 371 1.7E-156 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL538_15645 45a348ad85448eaeceda0397806b7fed 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.0E-155 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AL538_15645 45a348ad85448eaeceda0397806b7fed 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.6E-83 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 SMART SM00938 6 107 7.9E-70 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 25 43 4.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 85 105 4.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 54 77 4.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 4 19 4.1E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 Gene3D G3DSA:3.30.70.120 1 114 3.0E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 SUPERFAMILY SSF54913 3 114 2.1E-47 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL538_05380 f76ec64fbf1fda4ad97d52a83d61c238 114 PIRSF PIRSF039144 3 114 2.8E-58 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 2.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.3E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Pfam PF00679 Elongation factor G C-terminus 399 481 7.5E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Gene3D G3DSA:3.30.70.870 310 594 3.5E-130 T 11-10-2018 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Gene3D G3DSA:3.30.70.240 393 486 3.5E-130 T 11-10-2018 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 SMART SM00838 399 488 0.0088 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 SUPERFAMILY SSF52540 5 211 2.27E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Gene3D G3DSA:2.40.30.10 203 303 1.1E-33 T 11-10-2018 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Gene3D G3DSA:2.40.50.250 487 603 3.5E-130 T 11-10-2018 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 SUPERFAMILY SSF50447 155 303 3.95E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 6.3E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 Gene3D G3DSA:3.40.50.300 5 202 3.9E-69 T 11-10-2018 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.2E-294 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AL538_10200 1135cc4cbf715578f9d4170f150cd524 609 SUPERFAMILY SSF54980 402 516 7.67E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 SUPERFAMILY SSF54211 2 204 2.88E-65 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Gene3D G3DSA:3.30.230.10 23 202 3.8E-133 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.415 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Gene3D G3DSA:3.30.70.890 203 358 3.8E-133 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PIRSF PIRSF000530 1 385 5.4E-128 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00473 Galactokinase signature 93 104 3.3E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00473 Galactokinase signature 264 278 3.3E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00473 Galactokinase signature 113 131 3.3E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00473 Galactokinase signature 28 46 3.3E-30 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 11-10-2018 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 11-10-2018 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 11-10-2018 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 11-10-2018 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Pfam PF08544 GHMP kinases C terminal 280 361 1.6E-10 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.8E-22 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 SUPERFAMILY SSF55060 205 382 4.8E-53 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_05885 3e41b8f372080e6b4bf6647e50db8e6b 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.2E-148 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SMART SM00091 98 166 5.1E-6 T 11-10-2018 IPR000014 PAS domain AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SUPERFAMILY SSF55874 261 427 1.7E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SMART SM00387 317 429 1.8E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 8.6E-31 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Gene3D G3DSA:1.10.287.130 202 272 2.7E-20 T 11-10-2018 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SUPERFAMILY SSF55785 86 196 2.09E-11 T 11-10-2018 IPR035965 PAS domain superfamily AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.2E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Gene3D G3DSA:3.30.450.20 85 201 3.7E-10 T 11-10-2018 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 6.0E-6 T 11-10-2018 IPR000014 PAS domain AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 SMART SM00388 205 272 1.7E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Pfam PF00989 PAS fold 99 168 7.7E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 6.6E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 2.9E-138 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 Gene3D G3DSA:3.30.565.10 280 429 7.4E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_12200 e1f209bcc58d11a8de244e934071b39f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Gene3D G3DSA:3.40.50.800 4 555 3.8E-234 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Gene3D G3DSA:3.90.960.10 240 389 3.8E-234 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.0E-39 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 1.7E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 SUPERFAMILY SSF55681 10 478 4.61E-98 T 11-10-2018 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 6.8E-246 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Pfam PF03129 Anticodon binding domain 475 568 7.3E-23 T 11-10-2018 IPR004154 Anticodon-binding AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 PIRSF PIRSF001535 1 571 8.0E-265 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 SUPERFAMILY SSF52954 463 570 3.62E-34 T 11-10-2018 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Gene3D G3DSA:3.30.930.10 11 465 3.8E-234 T 11-10-2018 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 SUPERFAMILY SSF55826 218 390 3.66E-31 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.923 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL538_05580 b2f7193f2ad722a529b2cf1ef6cd6e87 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 SUPERFAMILY SSF53623 97 308 1.11E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.219 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Pfam PF08245 Mur ligase middle domain 108 291 5.8E-21 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Gene3D G3DSA:3.90.190.20 314 450 6.0E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Gene3D G3DSA:3.40.1190.10 91 313 5.9E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.1E-19 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 2.1E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 Gene3D G3DSA:3.40.50.720 1 90 9.2E-36 T 11-10-2018 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 3.7E-260 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 SUPERFAMILY SSF51984 1 89 1.14E-22 T 11-10-2018 AL538_11095 27a9ddcd937d002a0784539b9e66a4c2 452 SUPERFAMILY SSF53244 311 448 1.14E-37 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 Gene3D G3DSA:2.30.30.450 212 350 4.7E-55 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 Gene3D G3DSA:1.20.1280.70 357 418 3.7E-27 T 11-10-2018 AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 PIRSF PIRSF000977 1 473 1.5E-197 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 Pfam PF00929 Exonuclease 11 190 3.3E-23 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 Gene3D G3DSA:3.30.420.10 1 199 2.5E-73 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 Pfam PF08411 Exonuclease C-terminal 210 469 3.3E-102 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 SUPERFAMILY SSF53098 7 471 1.45E-137 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_01980 9e2c6c5f7d334aedc373a2e19d8e1e06 473 SMART SM00479 8 201 0.0027 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 Pfam PF02274 Amidinotransferase 18 403 3.9E-111 T 11-10-2018 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 SUPERFAMILY SSF55909 1 406 3.14E-128 T 11-10-2018 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 Gene3D G3DSA:1.10.3930.10 68 148 9.5E-148 T 11-10-2018 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.8E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 PIRSF PIRSF006356 1 406 1.8E-157 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 1.7E-173 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 45.466 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AL538_07280 3725dda57bbf985a5c787108e3047ba9 406 Gene3D G3DSA:3.75.10.10 6 403 9.5E-148 T 11-10-2018 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SMART SM00091 155 221 2.6E-7 T 11-10-2018 IPR000014 PAS domain AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Pfam PF00072 Response regulator receiver domain 529 638 1.3E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SUPERFAMILY SSF55785 140 267 1.06E-25 T 11-10-2018 IPR035965 PAS domain superfamily AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SUPERFAMILY SSF55874 336 506 2.1E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SUPERFAMILY SSF47384 270 347 2.94E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 2.9E-18 T 11-10-2018 IPR000014 PAS domain AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:1.10.287.130 268 345 1.1E-21 T 11-10-2018 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 8.1E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 4.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 4.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 4.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:3.30.450.20 150 267 7.8E-23 T 11-10-2018 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SMART SM00387 394 510 7.8E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 PIRSF PIRSF003182 1 789 0.0 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SUPERFAMILY SSF52172 527 645 8.82E-26 T 11-10-2018 IPR011006 CheY-like superfamily AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Pfam PF01627 Hpt domain 700 771 1.1E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Pfam PF08448 PAS fold 162 271 1.7E-18 T 11-10-2018 IPR013656 PAS fold-4 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SMART SM00388 282 347 2.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SMART SM00073 679 785 6.4E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:3.40.50.2300 523 648 1.1E-27 T 11-10-2018 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:1.10.287.970 1 89 2.1E-38 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:1.20.120.160 673 789 1.2E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SMART SM00448 527 638 4.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 Gene3D G3DSA:3.30.565.10 348 512 2.8E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_11780 98095b05a3be243f3f3cb84db3f7369c 789 SUPERFAMILY SSF47226 673 787 4.19E-29 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_14455 e09b18909c7307bf32d3ff8b5105ad33 100 Gene3D G3DSA:1.10.10.10 1 100 1.0E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14455 e09b18909c7307bf32d3ff8b5105ad33 100 SUPERFAMILY SSF46767 2 84 3.27E-25 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AL538_14455 e09b18909c7307bf32d3ff8b5105ad33 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 2.6E-24 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Gene3D G3DSA:3.90.79.10 223 356 1.3E-16 T 11-10-2018 AL538_07050 03bd9d646036278d1ddcd443887926df 358 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 SUPERFAMILY SSF55811 218 353 4.56E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Gene3D G3DSA:1.10.340.30 19 130 3.4E-88 T 11-10-2018 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 8.9E-22 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 SUPERFAMILY SSF48150 3 223 1.27E-74 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Pfam PF00633 Helix-hairpin-helix motif 97 125 4.4E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 SMART SM00525 189 209 4.8E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 3.5E-126 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Gene3D G3DSA:1.10.1670.10 7 209 3.4E-88 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 SMART SM00478 37 188 3.0E-47 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Pfam PF14815 NUDIX domain 242 352 1.0E-21 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL538_07050 03bd9d646036278d1ddcd443887926df 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 5.6E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 SUPERFAMILY SSF55073 307 469 3.66E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 SMART SM00267 291 467 1.6E-52 T 11-10-2018 IPR000160 GGDEF domain AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 Gene3D G3DSA:1.10.8.500 244 290 1.6E-5 T 11-10-2018 AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 463 3.7E-39 T 11-10-2018 IPR000160 GGDEF domain AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 465 6.1E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_16540 f10e22acedce4fbeeddaa75a4cdae4ae 475 Gene3D G3DSA:3.30.70.270 291 469 3.4E-46 T 11-10-2018 AL538_19105 d827b734a142d861098b99c9bd10c029 355 Gene3D G3DSA:3.60.15.10 3 355 1.8E-109 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_19105 d827b734a142d861098b99c9bd10c029 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 9.0E-13 T 11-10-2018 AL538_19105 d827b734a142d861098b99c9bd10c029 355 SUPERFAMILY SSF56281 35 290 2.47E-26 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 Gene3D G3DSA:3.20.20.80 28 461 8.0E-107 T 11-10-2018 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 SUPERFAMILY SSF49344 679 861 1.33E-20 T 11-10-2018 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 SUPERFAMILY SSF51445 32 465 1.09E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 SMART SM00642 44 459 2.4E-72 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 682 863 1.6E-16 T 11-10-2018 IPR019248 Glucodextranase-like, C-terminal AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 SUPERFAMILY SSF51011 480 557 4.66E-8 T 11-10-2018 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 Pfam PF00128 Alpha amylase, catalytic domain 76 424 2.7E-61 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 Gene3D G3DSA:2.60.40.1190 665 871 7.3E-16 T 11-10-2018 AL538_18130 4ea08fc49e38e309c1e940f362f802b4 877 Gene3D G3DSA:2.60.40.1180 463 556 7.9E-8 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 SUPERFAMILY SSF52518 9 178 2.89E-31 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 7.5E-35 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 568 32.0 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 444 9.6E-127 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Gene3D G3DSA:3.40.50.970 366 570 9.0E-46 T 11-10-2018 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 SUPERFAMILY SSF52518 398 561 5.12E-23 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 141 7.0E-30 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 PIRSF PIRSF004983 3 572 2.9E-180 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Gene3D G3DSA:3.40.50.1220 215 346 1.3E-36 T 11-10-2018 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Gene3D G3DSA:3.40.50.970 4 199 5.9E-57 T 11-10-2018 AL538_14310 3df8e406483e9cd7e3c216dcfa73ab1f 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 421 549 2.8E-5 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL538_08925 e6dc19494c6404b55125fb04ecc0adfb 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 1.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_08925 e6dc19494c6404b55125fb04ecc0adfb 213 Gene3D G3DSA:1.10.10.60 4 55 2.0E-23 T 11-10-2018 AL538_08925 e6dc19494c6404b55125fb04ecc0adfb 213 SUPERFAMILY SSF46689 4 80 1.99E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_08925 e6dc19494c6404b55125fb04ecc0adfb 213 Gene3D G3DSA:1.10.357.10 56 210 7.3E-37 T 11-10-2018 AL538_08925 e6dc19494c6404b55125fb04ecc0adfb 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 Gene3D G3DSA:3.30.230.10 1 118 2.3E-41 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 2.0E-45 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 SUPERFAMILY SSF54211 4 114 8.09E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.2E-28 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 Pfam PF00825 Ribonuclease P 6 112 3.9E-33 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL538_09665 2395bbcf006bdd9012f013f8625731c1 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.51 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AL538_16555 8837744491ebbf4b68527df72a343d37 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 11-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site AL538_16555 8837744491ebbf4b68527df72a343d37 401 PIRSF PIRSF006060 304 400 5.5 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PIRSF PIRSF006060 3 292 2.2E-10 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 2.4E-79 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_16555 8837744491ebbf4b68527df72a343d37 401 Gene3D G3DSA:1.20.1740.10 3 399 8.0E-11 T 11-10-2018 AL538_16555 8837744491ebbf4b68527df72a343d37 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 382 1.8E-110 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL538_16555 8837744491ebbf4b68527df72a343d37 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 1.6E-111 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 SUPERFAMILY SSF48695 37 470 1.27E-163 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 37 473 6.0E-249 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 PIRSF PIRSF000243 23 474 1.0E-125 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 Pfam PF02335 Cytochrome c552 41 470 5.6E-179 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 Gene3D G3DSA:1.10.1130.10 40 469 7.8E-187 T 11-10-2018 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.339 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 AL538_03210 15c4267a2defd72767d086dfeef0bbe7 475 Gene3D G3DSA:1.20.140.10 309 451 7.8E-187 T 11-10-2018 AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 Pfam PF12464 Maltose acetyltransferase 7 49 1.3E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 SUPERFAMILY SSF51161 2 183 6.1E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 SMART SM01266 5 58 3.6E-13 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.3E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_17195 f88ded593272a4dbfc84a5a16d204515 185 Gene3D G3DSA:2.160.10.10 1 185 3.0E-68 T 11-10-2018 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 SUPERFAMILY SSF51569 3 207 2.01E-69 T 11-10-2018 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 Pfam PF01081 KDPG and KHG aldolase 7 200 5.9E-77 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 Gene3D G3DSA:3.20.20.70 1 209 6.4E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_26615 da6648e79a5d1f4d6f4c76493f408768 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 2.8E-84 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_06840 4d17db7a0e63c911f94aa38a6ef52381 86 SUPERFAMILY SSF109910 3 79 1.15E-25 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AL538_06840 4d17db7a0e63c911f94aa38a6ef52381 86 Gene3D G3DSA:1.10.150.250 1 86 3.8E-37 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AL538_06840 4d17db7a0e63c911f94aa38a6ef52381 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 3.4E-24 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 4.6E-116 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 2.1E-170 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 PIRSF PIRSF001434 1 391 5.2E-125 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 Gene3D G3DSA:3.90.1150.10 256 391 1.9E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 Gene3D G3DSA:3.40.640.10 3 255 2.5E-77 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_16030 23357d6557f7c7bffdb96e3f6eff9de5 401 SUPERFAMILY SSF53383 21 388 1.55E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 SMART SM00283 133 391 5.9E-52 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 Gene3D G3DSA:1.10.287.950 100 392 1.4E-57 T 11-10-2018 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 SUPERFAMILY SSF58104 102 389 1.15E-61 T 11-10-2018 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 231 258 4.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 260 289 4.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 43 63 4.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_00110 4ff78e57b61ab58c993430d9120495fa 392 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 177 360 1.6E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Pfam PF00472 RF-1 domain 218 323 9.9E-39 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Gene3D G3DSA:3.30.70.1660 115 343 3.1E-95 T 11-10-2018 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 SMART SM00937 67 180 1.4E-67 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Pfam PF03462 PCRF domain 13 205 2.9E-77 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.8E-170 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.934 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Gene3D G3DSA:3.30.160.20 212 293 3.1E-95 T 11-10-2018 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 Gene3D G3DSA:1.20.58.410 3 96 1.5E-8 T 11-10-2018 AL538_13270 b0631aae9d34d893aeef6e4517616580 362 SUPERFAMILY SSF75620 12 355 6.28E-137 T 11-10-2018 AL538_03355 7a58a66973eae06d2006e50699e639e4 206 SUPERFAMILY SSF55821 1 203 7.32E-64 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL538_03355 7a58a66973eae06d2006e50699e639e4 206 Gene3D G3DSA:3.90.870.10 1 205 7.4E-68 T 11-10-2018 AL538_03355 7a58a66973eae06d2006e50699e639e4 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.9E-70 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL538_03355 7a58a66973eae06d2006e50699e639e4 206 Pfam PF01300 Telomere recombination 23 198 3.3E-45 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL538_23880 33941344fefd69803adeb1a333646cc2 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 4.0E-22 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AL538_23880 33941344fefd69803adeb1a333646cc2 372 PIRSF PIRSF006487 1 372 1.6E-79 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL538_23880 33941344fefd69803adeb1a333646cc2 372 Gene3D G3DSA:2.40.30.110 284 361 7.7E-28 T 11-10-2018 AL538_23880 33941344fefd69803adeb1a333646cc2 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 1.0E-104 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL538_23880 33941344fefd69803adeb1a333646cc2 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 4.1E-88 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AL538_23880 33941344fefd69803adeb1a333646cc2 372 SUPERFAMILY SSF103025 4 281 8.16E-90 T 11-10-2018 AL538_23880 33941344fefd69803adeb1a333646cc2 372 Gene3D G3DSA:3.30.70.1400 56 139 3.0E-84 T 11-10-2018 AL538_23880 33941344fefd69803adeb1a333646cc2 372 SUPERFAMILY SSF101790 279 371 1.96E-25 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AL538_23880 33941344fefd69803adeb1a333646cc2 372 Gene3D G3DSA:4.10.1250.10 233 281 1.8E-20 T 11-10-2018 AL538_23880 33941344fefd69803adeb1a333646cc2 372 Gene3D G3DSA:3.30.1360.120 7 231 3.0E-84 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.597 T 11-10-2018 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 SUPERFAMILY SSF52016 418 596 1.26E-51 T 11-10-2018 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 SUPERFAMILY SSF143975 3 417 1.7E-130 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 Gene3D G3DSA:3.50.30.80 418 563 9.4E-48 T 11-10-2018 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 596 1.7E-249 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AL538_09975 15f1b857e8dde7ecf036f6a80f1c0fc1 598 Pfam PF00920 Dehydratase family 68 594 1.2E-148 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 6.0E-131 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.913 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 4.4E-73 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Pfam PF13721 SecD export protein N-terminal TM region 14 110 6.8E-22 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Gene3D G3DSA:3.30.70.3400 230 434 1.3E-46 T 11-10-2018 AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 SUPERFAMILY SSF82866 407 604 1.7E-40 T 11-10-2018 AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Pfam PF02355 Protein export membrane protein 430 598 1.4E-17 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL538_22615 6979ef461a9bc8c512283b5dc98edd8c 612 Gene3D G3DSA:3.30.1360.200 288 428 1.3E-46 T 11-10-2018 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.818 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF00717 Peptidase S24-like 118 183 1.5E-15 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:1.10.10.10 1 69 1.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 Gene3D G3DSA:2.10.109.10 84 206 3.6E-44 T 11-10-2018 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF51306 80 202 1.57E-36 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 SUPERFAMILY SSF46785 3 69 2.33E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 6.4E-81 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AL538_08945 5013e6b5d289a217042c63ae6fbdeffe 206 Pfam PF01726 LexA DNA binding domain 1 65 3.7E-29 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AL538_26125 994cb648a051831f0df758b995efe7f9 763 Gene3D G3DSA:3.20.20.450 506 762 4.6E-93 T 11-10-2018 IPR035919 EAL domain superfamily AL538_26125 994cb648a051831f0df758b995efe7f9 763 SMART SM00052 502 747 6.5E-109 T 11-10-2018 IPR001633 EAL domain AL538_26125 994cb648a051831f0df758b995efe7f9 763 SUPERFAMILY SSF141868 507 754 8.89E-87 T 11-10-2018 IPR035919 EAL domain superfamily AL538_26125 994cb648a051831f0df758b995efe7f9 763 Pfam PF00563 EAL domain 508 742 8.2E-72 T 11-10-2018 IPR001633 EAL domain AL538_26125 994cb648a051831f0df758b995efe7f9 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 8.4E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_26125 994cb648a051831f0df758b995efe7f9 763 Gene3D G3DSA:3.30.450.20 27 181 3.1E-10 T 11-10-2018 AL538_26125 994cb648a051831f0df758b995efe7f9 763 Gene3D G3DSA:3.30.70.270 330 505 6.8E-51 T 11-10-2018 AL538_26125 994cb648a051831f0df758b995efe7f9 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 487 1.1E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_26125 994cb648a051831f0df758b995efe7f9 763 SUPERFAMILY SSF55073 341 493 1.26E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_26125 994cb648a051831f0df758b995efe7f9 763 SMART SM00267 325 492 1.2E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_00665 179eb8e504dfa27b28b3e6c012716d9d 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_00665 179eb8e504dfa27b28b3e6c012716d9d 202 Gene3D G3DSA:3.30.70.20 63 120 1.4E-33 T 11-10-2018 AL538_00665 179eb8e504dfa27b28b3e6c012716d9d 202 Pfam PF13247 4Fe-4S dicluster domain 54 167 4.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_00665 179eb8e504dfa27b28b3e6c012716d9d 202 SUPERFAMILY SSF54862 1 183 4.19E-48 T 11-10-2018 AL538_00665 179eb8e504dfa27b28b3e6c012716d9d 202 Gene3D G3DSA:3.30.70.20 5 181 1.4E-33 T 11-10-2018 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 SUPERFAMILY SSF46785 2 68 3.18E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 9.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 9.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 5.1E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 SMART SM00345 5 64 4.1E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 SMART SM00866 85 224 3.6E-32 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 Gene3D G3DSA:3.40.1410.10 69 229 1.1E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 SUPERFAMILY SSF64288 52 231 3.14E-46 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 Gene3D G3DSA:1.10.10.10 1 68 9.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26370 46d8baeba3d6cf7df1c0a26220841e52 234 Pfam PF07702 UTRA domain 88 224 6.0E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_14875 b3733d6a2fd1e907266b4410e0b0c6de 248 SUPERFAMILY SSF50630 107 242 1.88E-42 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_14875 b3733d6a2fd1e907266b4410e0b0c6de 248 SUPERFAMILY SSF58100 33 121 1.52E-5 T 11-10-2018 AL538_14875 b3733d6a2fd1e907266b4410e0b0c6de 248 Gene3D G3DSA:2.40.70.10 104 235 1.4E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_14875 b3733d6a2fd1e907266b4410e0b0c6de 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 245 6.5E-48 T 11-10-2018 AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 SUPERFAMILY SSF46626 307 386 6.41E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 PIRSF PIRSF000014 1 394 1.2E-160 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 1.4E-71 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.5E-187 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 Gene3D G3DSA:1.10.3820.10 15 192 3.0E-38 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL538_15910 947e536c91b5a4b1b1009629ee69df7e 394 SUPERFAMILY SSF48695 12 187 8.97E-60 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_11635 82915e069d1802e66f870cd9479c5e3d 398 Pfam PF01098 Cell cycle protein 26 381 7.5E-114 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11635 82915e069d1802e66f870cd9479c5e3d 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11635 82915e069d1802e66f870cd9479c5e3d 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.13 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11635 82915e069d1802e66f870cd9479c5e3d 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.9E-128 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SMART SM00851 955 1041 3.5E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_11690 d1990b5797c83bddb331830492418a37 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.7E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 5.7E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:1.10.1030.10 404 553 5.4E-52 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.339 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF52440 1 127 1.87E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF52440 556 675 3.17E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_11690 d1990b5797c83bddb331830492418a37 1077 Pfam PF02142 MGS-like domain 956 1041 1.0E-15 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_11690 d1990b5797c83bddb331830492418a37 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF56059 128 401 1.94E-108 T 11-10-2018 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF52335 936 1071 7.2E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_11690 d1990b5797c83bddb331830492418a37 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF56059 673 932 3.18E-103 T 11-10-2018 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SUPERFAMILY SSF48108 396 554 4.84E-52 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:3.30.470.20 119 403 7.2E-129 T 11-10-2018 AL538_11690 d1990b5797c83bddb331830492418a37 1077 SMART SM01096 424 547 7.0E-75 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.074 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:3.40.50.20 1 116 4.0E-50 T 11-10-2018 AL538_11690 d1990b5797c83bddb331830492418a37 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:3.30.470.20 665 934 3.5E-123 T 11-10-2018 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.6E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:3.40.50.1380 937 1072 3.5E-33 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_11690 d1990b5797c83bddb331830492418a37 1077 Gene3D G3DSA:3.40.50.20 554 662 3.7E-49 T 11-10-2018 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 SUPERFAMILY SSF74650 7 350 7.53E-110 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 Pfam PF01263 Aldose 1-epimerase 22 348 1.2E-91 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 Gene3D G3DSA:2.70.98.10 11 351 4.5E-117 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 17 350 2.7E-152 T 11-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 176 185 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL538_05880 276d6fd85015dede92c362b2c1cba5a5 352 PIRSF PIRSF005096 4 352 9.6E-123 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 SUPERFAMILY SSF53613 230 507 3.82E-71 T 11-10-2018 IPR029056 Ribokinase-like AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Gene3D G3DSA:3.40.50.10260 5 219 7.7E-58 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Pfam PF03853 YjeF-related protein N-terminus 32 193 8.3E-43 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Pfam PF01256 Carbohydrate kinase 253 501 1.6E-51 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Gene3D G3DSA:3.40.1190.20 224 508 3.5E-79 T 11-10-2018 IPR029056 Ribokinase-like AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 213 1.2E-50 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.261 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.666 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 505 4.9E-60 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 SUPERFAMILY SSF64153 8 250 3.66E-62 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AL538_26050 1c60ea1cf01a34ebc517aa6489f53316 511 PIRSF PIRSF017184 7 510 6.7E-130 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AL538_19850 3205d88e26153a20250abe1dbcbce319 258 Pfam PF06629 MltA-interacting protein MipA 49 258 1.8E-39 T 11-10-2018 IPR010583 MltA-interacting MipA AL538_21455 44a17b25082441751f8ac8ae60331df4 309 Pfam PF03466 LysR substrate binding domain 94 301 1.2E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21455 44a17b25082441751f8ac8ae60331df4 309 SUPERFAMILY SSF53850 95 301 1.66E-37 T 11-10-2018 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 Gene3D G3DSA:3.40.190.10 98 298 2.0E-57 T 11-10-2018 AL538_21455 44a17b25082441751f8ac8ae60331df4 309 SUPERFAMILY SSF46785 10 116 1.59E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21455 44a17b25082441751f8ac8ae60331df4 309 Gene3D G3DSA:1.10.10.10 9 95 2.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21455 44a17b25082441751f8ac8ae60331df4 309 Gene3D G3DSA:3.40.190.10 169 270 2.0E-57 T 11-10-2018 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 1.4E-61 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 SUPERFAMILY SSF51735 5 159 4.28E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 Gene3D G3DSA:3.30.360.10 130 316 2.8E-152 T 11-10-2018 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 PIRSF PIRSF000148 4 337 6.0E-135 T 11-10-2018 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.42 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 SUPERFAMILY SSF55347 131 320 2.17E-78 T 11-10-2018 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.4E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 Gene3D G3DSA:3.40.50.720 7 330 2.8E-152 T 11-10-2018 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.3E-129 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 SMART SM00859 6 121 5.6E-40 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_04840 7c00502c60e8e0a2fef382293723fba3 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_25240 a98e8be9cc27761ecafd5073cfddf780 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 408 5.6E-17 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF02565 Recombination protein O C terminal 90 230 2.7E-24 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 3.1E-42 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.927 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF57863 91 170 1.67E-11 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:1.20.1440.120 84 242 1.1E-52 T 11-10-2018 AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.4E-24 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL538_06785 c0f2e6ba000dc4877047c260dea71f87 243 Gene3D G3DSA:2.40.50.140 6 83 4.1E-34 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 SUPERFAMILY SSF51905 14 199 2.88E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 3.8E-9 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 3.8E-9 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.8E-9 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 182 3.8E-9 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Gene3D G3DSA:3.30.413.10 634 794 1.3E-34 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Gene3D G3DSA:3.50.50.60 17 292 6.2E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 SUPERFAMILY SSF51905 159 319 7.56E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 294 1.6E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 SUPERFAMILY SSF55124 505 644 1.96E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00397 Sirohaem Fe-binding site signature 639 657 8.7E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00397 Sirohaem Fe-binding site signature 682 700 8.7E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 16 803 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 1.6E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.8E-17 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 4.8E-17 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-17 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.8E-17 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.8E-17 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 426 474 3.0E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Gene3D G3DSA:3.50.50.60 120 255 6.2E-85 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 682 698 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 PIRSF PIRSF037149 9 838 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Gene3D G3DSA:1.10.10.1100 425 480 8.2E-12 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 SUPERFAMILY SSF56014 636 810 1.26E-49 T 11-10-2018 AL538_25185 9e0bacbfb71caae664f874c15a597e9d 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 635 760 1.1E-18 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 Gene3D G3DSA:3.40.1080.10 235 504 3.4E-121 T 11-10-2018 AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 SUPERFAMILY SSF100950 19 233 1.58E-74 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 SUPERFAMILY SSF100950 237 502 4.6E-60 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 38 502 2.0E-246 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 PIRSF PIRSF009451 8 504 3.8E-251 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 Gene3D G3DSA:3.40.1080.10 4 233 6.7E-97 T 11-10-2018 AL538_01515 c40766247d908ced43dbb1ea9fb0bc22 505 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 34 503 6.5E-235 T 11-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 Gene3D G3DSA:3.40.1010.20 97 198 4.8E-108 T 11-10-2018 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 Pfam PF02401 LytB protein 3 284 5.4E-92 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.972 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 Gene3D G3DSA:3.40.50.11270 12 96 4.8E-108 T 11-10-2018 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 Gene3D G3DSA:3.40.1010.20 6 283 4.8E-108 T 11-10-2018 AL538_12010 90a51644ffa3a394a706476a6519ee45 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 2.9E-98 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AL538_11990 94a63b419997ea790d58a9036886a49e 311 Gene3D G3DSA:3.40.50.620 1 187 1.6E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_11990 94a63b419997ea790d58a9036886a49e 311 SUPERFAMILY SSF82114 174 309 3.71E-45 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL538_11990 94a63b419997ea790d58a9036886a49e 311 SUPERFAMILY SSF52374 15 175 3.1E-36 T 11-10-2018 AL538_11990 94a63b419997ea790d58a9036886a49e 311 SMART SM00904 183 307 9.5E-64 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AL538_11990 94a63b419997ea790d58a9036886a49e 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 54 6.5E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_11990 94a63b419997ea790d58a9036886a49e 311 Pfam PF01687 Riboflavin kinase 184 306 7.2E-39 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AL538_11990 94a63b419997ea790d58a9036886a49e 311 Pfam PF06574 FAD synthetase 11 167 1.2E-59 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL538_11990 94a63b419997ea790d58a9036886a49e 311 Gene3D G3DSA:2.40.30.30 188 311 3.6E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AL538_11990 94a63b419997ea790d58a9036886a49e 311 PIRSF PIRSF004491 1 311 1.2E-107 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL538_11990 94a63b419997ea790d58a9036886a49e 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 8.2E-108 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Gene3D G3DSA:3.30.70.3280 390 529 1.5E-52 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.886 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.0E-46 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 SUPERFAMILY SSF50447 262 393 5.3E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 5.1E-300 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 4.2E-46 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 SUPERFAMILY SSF52540 10 277 1.13E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Gene3D G3DSA:3.40.50.300 72 379 1.1E-113 T 11-10-2018 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 Gene3D G3DSA:3.40.50.300 110 275 1.1E-113 T 11-10-2018 AL538_06090 18adad1a1be1171b1cccca9abb490ed1 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_06570 512d2e982bc50c453a9b095684c513aa 424 Gene3D G3DSA:3.30.465.10 339 418 1.3E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL538_06570 512d2e982bc50c453a9b095684c513aa 424 Gene3D G3DSA:3.10.580.10 201 330 3.5E-42 T 11-10-2018 AL538_06570 512d2e982bc50c453a9b095684c513aa 424 SUPERFAMILY SSF56176 339 419 1.36E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_06570 512d2e982bc50c453a9b095684c513aa 424 SMART SM01091 342 420 3.5E-23 T 11-10-2018 IPR005170 Transporter-associated domain AL538_06570 512d2e982bc50c453a9b095684c513aa 424 Pfam PF03471 Transporter associated domain 344 418 1.6E-16 T 11-10-2018 IPR005170 Transporter-associated domain AL538_06570 512d2e982bc50c453a9b095684c513aa 424 Pfam PF00571 CBS domain 278 326 3.6E-4 T 11-10-2018 IPR000644 CBS domain AL538_06570 512d2e982bc50c453a9b095684c513aa 424 SUPERFAMILY SSF54631 192 329 2.65E-24 T 11-10-2018 AL538_06570 512d2e982bc50c453a9b095684c513aa 424 Pfam PF01595 Domain of unknown function DUF21 13 181 1.1E-49 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Gene3D G3DSA:1.20.1270.10 520 616 1.6E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 3.8E-266 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Gene3D G3DSA:3.90.640.10 238 311 6.4E-112 T 11-10-2018 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 SUPERFAMILY SSF53067 19 196 5.7E-51 T 11-10-2018 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Pfam PF00012 Hsp70 protein 22 601 9.3E-190 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.227 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 SUPERFAMILY SSF100934 504 616 8.24E-34 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Gene3D G3DSA:3.30.420.40 194 361 6.4E-112 T 11-10-2018 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 SUPERFAMILY SSF100920 384 537 8.11E-51 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 SUPERFAMILY SSF53067 200 377 4.03E-49 T 11-10-2018 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Gene3D G3DSA:2.60.34.10 379 519 4.3E-49 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.0E-52 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12370 077674f3f31186c7b429f37a63aeba22 617 Gene3D G3DSA:3.30.420.40 23 374 6.4E-112 T 11-10-2018 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:3.40.50.300 77 345 6.9E-110 T 11-10-2018 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 1.6E-251 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 SMART SM00382 143 328 4.3E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:2.40.10.170 1 76 2.8E-28 T 11-10-2018 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF50615 1 76 2.3E-24 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Gene3D G3DSA:1.10.1140.10 346 461 4.7E-56 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.072 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 3.5E-21 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 5.3E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF52540 78 348 7.55E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23170 14ef9cdcf0a6259db9890bcc8504b6cf 461 SUPERFAMILY SSF47917 346 460 1.18E-52 T 11-10-2018 AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 SMART SM00843 1023 1088 4.3E-38 T 11-10-2018 IPR018541 FtsK gamma domain AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 SUPERFAMILY SSF52540 680 992 3.72E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Gene3D G3DSA:1.10.10.10 1017 1084 3.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Gene3D G3DSA:3.30.980.40 598 702 1.2E-32 T 11-10-2018 AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Pfam PF09397 Ftsk gamma domain 1025 1085 9.3E-26 T 11-10-2018 IPR018541 FtsK gamma domain AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Pfam PF01580 FtsK/SpoIIIE family 706 919 4.4E-70 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 SUPERFAMILY SSF46785 1023 1088 4.49E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 7.2E-42 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AL538_15655 74f73331cf56435fbfbc41ff0a78febc 1091 Gene3D G3DSA:3.40.50.300 703 1005 9.9E-120 T 11-10-2018 AL538_11220 c77881671d1f96ca6d448f0da02c39a5 260 Pfam PF04784 Protein of unknown function, DUF547 88 198 6.8E-23 T 11-10-2018 IPR006869 Domain of unknown function DUF547 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 43 322 5.4E-139 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Gene3D G3DSA:1.10.601.10 2 157 1.7E-47 T 11-10-2018 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Pfam PF04545 Sigma-70, region 4 256 309 2.2E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 SUPERFAMILY SSF88659 218 317 1.87E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Gene3D G3DSA:1.10.10.10 161 236 3.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06705 1e074d69c1b901a3439ac777f427035e 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 112 125 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Pfam PF04539 Sigma-70 region 3 168 241 2.5E-22 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 2 322 39.595 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Pfam PF00140 Sigma-70 factor, region 1.2 50 83 4.0E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 281 307 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 SUPERFAMILY SSF88659 161 234 2.09E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Pfam PF04542 Sigma-70 region 2 88 157 6.8E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 PRINTS PR00046 Major sigma-70 factor signature 112 125 6.1E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 PRINTS PR00046 Major sigma-70 factor signature 260 272 6.1E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 PRINTS PR00046 Major sigma-70 factor signature 296 307 6.1E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 PRINTS PR00046 Major sigma-70 factor signature 136 144 6.1E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 PRINTS PR00046 Major sigma-70 factor signature 281 296 6.1E-28 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 SUPERFAMILY SSF88946 49 158 9.29E-46 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 84 311 3.5E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_06705 1e074d69c1b901a3439ac777f427035e 327 Gene3D G3DSA:1.10.10.10 238 318 2.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10035 da6f7fa82acf7429e4f726191ecd953e 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 2.3E-106 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL538_10035 da6f7fa82acf7429e4f726191ecd953e 259 SUPERFAMILY SSF53335 4 255 4.37E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_10035 da6f7fa82acf7429e4f726191ecd953e 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.743 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AL538_10035 da6f7fa82acf7429e4f726191ecd953e 259 Gene3D G3DSA:3.40.50.150 57 259 3.5E-75 T 11-10-2018 AL538_10035 da6f7fa82acf7429e4f726191ecd953e 259 Gene3D G3DSA:3.40.1630.10 1 56 4.9E-21 T 11-10-2018 AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 Gene3D G3DSA:1.10.287.70 123 227 3.7E-21 T 11-10-2018 AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 Pfam PF07885 Ion channel 134 217 9.9E-18 T 11-10-2018 IPR013099 Potassium channel domain AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 SUPERFAMILY SSF81324 125 220 8.37E-19 T 11-10-2018 AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 PRINTS PR00169 Potassium channel signature 193 219 7.5E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 PRINTS PR00169 Potassium channel signature 126 149 7.5E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_18070 b78f89c8ac85a21717299335aeb45b1d 228 PRINTS PR00169 Potassium channel signature 164 186 7.5E-6 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_14155 09aa88d0db5448ba736738354381f912 539 Gene3D G3DSA:2.30.38.10 364 439 3.4E-25 T 11-10-2018 AL538_14155 09aa88d0db5448ba736738354381f912 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_14155 09aa88d0db5448ba736738354381f912 539 SUPERFAMILY SSF56801 17 538 6.54E-133 T 11-10-2018 AL538_14155 09aa88d0db5448ba736738354381f912 539 Gene3D G3DSA:3.30.300.310 441 539 3.6E-29 T 11-10-2018 AL538_14155 09aa88d0db5448ba736738354381f912 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 8.0E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_14155 09aa88d0db5448ba736738354381f912 539 Gene3D G3DSA:3.40.50.980 28 178 4.0E-37 T 11-10-2018 AL538_14155 09aa88d0db5448ba736738354381f912 539 Gene3D G3DSA:3.40.50.980 191 363 5.3E-58 T 11-10-2018 AL538_14155 09aa88d0db5448ba736738354381f912 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 10 535 6.1E-230 T 11-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 AL538_14155 09aa88d0db5448ba736738354381f912 539 Pfam PF00501 AMP-binding enzyme 39 445 1.9E-81 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_18775 e4823c3fe30566bfd96ff2b0c3c98b36 153 SUPERFAMILY SSF56524 30 151 2.62E-12 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AL538_26820 2ed6d2d1ae437d7b6d61a960834e5604 296 SUPERFAMILY SSF103481 74 153 6.93E-11 T 11-10-2018 AL538_26820 2ed6d2d1ae437d7b6d61a960834e5604 296 Pfam PF00892 EamA-like transporter family 164 285 2.6E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_26820 2ed6d2d1ae437d7b6d61a960834e5604 296 Pfam PF00892 EamA-like transporter family 18 149 1.2E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_26820 2ed6d2d1ae437d7b6d61a960834e5604 296 SUPERFAMILY SSF103481 192 288 1.18E-6 T 11-10-2018 AL538_10075 0485e22447daa476566bda7931b23ae5 815 Gene3D G3DSA:3.30.450.20 145 269 5.2E-19 T 11-10-2018 AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00086 341 383 7.5E-8 T 11-10-2018 IPR001610 PAC motif AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00086 219 261 3.3 T 11-10-2018 IPR001610 PAC motif AL538_10075 0485e22447daa476566bda7931b23ae5 815 Pfam PF00563 EAL domain 572 807 1.9E-75 T 11-10-2018 IPR001633 EAL domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SUPERFAMILY SSF55785 136 256 2.09E-15 T 11-10-2018 IPR035965 PAS domain superfamily AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00091 269 336 2.0E-8 T 11-10-2018 IPR000014 PAS domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00091 146 212 25.0 T 11-10-2018 IPR000014 PAS domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 8.2E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SUPERFAMILY SSF141868 572 813 3.01E-88 T 11-10-2018 IPR035919 EAL domain superfamily AL538_10075 0485e22447daa476566bda7931b23ae5 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 554 9.2E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 Pfam PF08448 PAS fold 159 262 2.0E-11 T 11-10-2018 IPR013656 PAS fold-4 AL538_10075 0485e22447daa476566bda7931b23ae5 815 Pfam PF00989 PAS fold 273 380 3.0E-19 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_10075 0485e22447daa476566bda7931b23ae5 815 Gene3D G3DSA:3.30.70.270 392 569 3.4E-59 T 11-10-2018 AL538_10075 0485e22447daa476566bda7931b23ae5 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 5.1E-24 T 11-10-2018 IPR000014 PAS domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 268 2.1E-7 T 11-10-2018 IPR000014 PAS domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00267 383 556 6.9E-63 T 11-10-2018 IPR000160 GGDEF domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SUPERFAMILY SSF55785 277 380 4.36E-29 T 11-10-2018 IPR035965 PAS domain superfamily AL538_10075 0485e22447daa476566bda7931b23ae5 815 PIRSF PIRSF005925 146 275 2.7E-4 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AL538_10075 0485e22447daa476566bda7931b23ae5 815 PIRSF PIRSF005925 263 393 1.1E-13 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AL538_10075 0485e22447daa476566bda7931b23ae5 815 PIRSF PIRSF005925 382 815 2.6E-136 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase AL538_10075 0485e22447daa476566bda7931b23ae5 815 Gene3D G3DSA:3.30.450.20 270 391 9.3E-37 T 11-10-2018 AL538_10075 0485e22447daa476566bda7931b23ae5 815 SMART SM00052 566 812 4.8E-117 T 11-10-2018 IPR001633 EAL domain AL538_10075 0485e22447daa476566bda7931b23ae5 815 SUPERFAMILY SSF55073 399 558 1.18E-47 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_10075 0485e22447daa476566bda7931b23ae5 815 Gene3D G3DSA:3.20.20.450 570 815 6.6E-99 T 11-10-2018 IPR035919 EAL domain superfamily AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 SUPERFAMILY SSF46689 20 78 1.9E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 3.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 79 156 5.0E-6 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 Gene3D G3DSA:1.10.357.10 6 171 1.7E-23 T 11-10-2018 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 3.7E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 3.7E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_27035 be225a00767c13cd7d3531dc0c2303fb 188 SUPERFAMILY SSF48498 83 159 5.67E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 1.1E-7 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 3.0E-93 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 PIRSF PIRSF010376 9 285 3.9E-86 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.008 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 Gene3D G3DSA:3.30.230.10 3 165 1.7E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 Pfam PF08544 GHMP kinases C terminal 209 265 1.5E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 SUPERFAMILY SSF55060 167 282 1.15E-35 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 SUPERFAMILY SSF54211 11 163 1.75E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_13255 1263163d70f4bd5bd079141f731aa6aa 295 Gene3D G3DSA:3.30.70.890 167 285 3.8E-29 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_11290 049820d7d9ec7023ed4765194f174670 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL538_11290 049820d7d9ec7023ed4765194f174670 470 SUPERFAMILY SSF52935 323 469 3.14E-33 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 Gene3D G3DSA:3.20.20.60 4 332 4.9E-148 T 11-10-2018 AL538_11290 049820d7d9ec7023ed4765194f174670 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 2.1E-27 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 3.4E-155 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 Gene3D G3DSA:3.40.1380.20 336 467 6.5E-41 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.8E-187 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_11290 049820d7d9ec7023ed4765194f174670 470 SUPERFAMILY SSF51621 1 339 2.3E-102 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_11290 049820d7d9ec7023ed4765194f174670 470 Gene3D G3DSA:2.40.33.10 71 167 4.9E-148 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_07925 9483fa300a664792510ef8ccd2d4da59 260 SUPERFAMILY SSF54534 46 253 1.12E-64 T 11-10-2018 AL538_07925 9483fa300a664792510ef8ccd2d4da59 260 Gene3D G3DSA:3.10.50.40 148 260 8.0E-43 T 11-10-2018 AL538_07925 9483fa300a664792510ef8ccd2d4da59 260 Gene3D G3DSA:1.10.287.460 31 147 1.6E-31 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AL538_07925 9483fa300a664792510ef8ccd2d4da59 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_07925 9483fa300a664792510ef8ccd2d4da59 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 1.5E-33 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 Gene3D G3DSA:3.30.70.270 191 370 1.8E-43 T 11-10-2018 AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 369 1.7E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 Gene3D G3DSA:1.20.120.50 4 140 1.6E-29 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 11 133 1.1E-25 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 SUPERFAMILY SSF55073 211 369 1.73E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 SMART SM00267 195 371 1.5E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 366 1.4E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_01825 ec9c347eb6f5e0c95b0da37ad3372d71 373 SUPERFAMILY SSF47188 7 132 2.88E-23 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 SUPERFAMILY SSF48008 98 235 4.97E-20 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 SMART SM00895 99 227 6.2E-19 T 11-10-2018 IPR011711 GntR, C-terminal AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 Pfam PF07729 FCD domain 99 226 5.0E-18 T 11-10-2018 IPR011711 GntR, C-terminal AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 SUPERFAMILY SSF46785 5 76 1.96E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 Gene3D G3DSA:1.20.120.530 97 236 1.6E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_06485 b68ab16dcf9299c8595d760ee1a79a50 255 SMART SM00345 15 74 9.1E-28 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19400 3b7fbbe3c6c4c194189c0e0a1db68550 284 SUPERFAMILY SSF52540 15 263 5.69E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19400 3b7fbbe3c6c4c194189c0e0a1db68550 284 Pfam PF00005 ABC transporter 36 191 7.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19400 3b7fbbe3c6c4c194189c0e0a1db68550 284 Gene3D G3DSA:3.40.50.300 13 283 3.8E-85 T 11-10-2018 AL538_19400 3b7fbbe3c6c4c194189c0e0a1db68550 284 SMART SM00382 44 250 2.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19400 3b7fbbe3c6c4c194189c0e0a1db68550 284 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_09410 1249d131097e2432907750f1a13490a5 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 3.0E-85 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL538_09410 1249d131097e2432907750f1a13490a5 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 7.0E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL538_09410 1249d131097e2432907750f1a13490a5 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.053 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AL538_09410 1249d131097e2432907750f1a13490a5 277 Gene3D G3DSA:3.40.50.10860 8 258 4.2E-83 T 11-10-2018 AL538_09410 1249d131097e2432907750f1a13490a5 277 SUPERFAMILY SSF51735 106 273 3.14E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09410 1249d131097e2432907750f1a13490a5 277 SUPERFAMILY SSF53223 6 105 8.06E-32 T 11-10-2018 AL538_09410 1249d131097e2432907750f1a13490a5 277 Gene3D G3DSA:3.40.50.720 119 239 4.2E-83 T 11-10-2018 AL538_09410 1249d131097e2432907750f1a13490a5 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 9.6E-14 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Gene3D G3DSA:3.40.50.300 1 264 2.7E-51 T 11-10-2018 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 150 7.5E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Gene3D G3DSA:3.30.230.10 463 666 4.4E-76 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Pfam PF14492 Elongation Factor G, domain II 382 455 6.4E-22 T 11-10-2018 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SMART SM00889 458 576 2.4E-53 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SMART SM00838 578 666 2.7E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 4.9E-27 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Gene3D G3DSA:3.30.70.870 390 459 7.9E-18 T 11-10-2018 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SUPERFAMILY SSF54211 457 577 1.31E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SUPERFAMILY SSF54980 579 670 1.39E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Gene3D G3DSA:2.40.30.10 268 389 1.0E-25 T 11-10-2018 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Pfam PF03764 Elongation factor G, domain IV 457 575 5.9E-37 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SUPERFAMILY SSF50447 243 370 4.29E-21 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Gene3D G3DSA:3.30.70.240 582 653 4.4E-76 T 11-10-2018 AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 Pfam PF00679 Elongation factor G C-terminus 579 665 9.7E-25 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SUPERFAMILY SSF52540 2 259 9.06E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17515 8d880b0830b1877879d8a1c64618f25c 674 SUPERFAMILY SSF54980 381 457 6.83E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 11-10-2018 IPR005824 KOW AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 Pfam PF02357 Transcription termination factor nusG 7 112 2.0E-26 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00738 6 115 2.2E-49 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.574 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 3.3E-70 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 Gene3D G3DSA:3.30.70.940 1 122 6.3E-47 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_08680 1687697d4ef85ae8bb0659ba67738f4e 182 SMART SM00739 127 154 3.9E-4 T 11-10-2018 IPR005824 KOW AL538_23100 e780d74df25e264affe36b9ecb641cca 438 SUPERFAMILY SSF102114 41 385 1.05E-37 T 11-10-2018 AL538_23100 e780d74df25e264affe36b9ecb641cca 438 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 193 426 5.0E-8 T 11-10-2018 AL538_23100 e780d74df25e264affe36b9ecb641cca 438 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 315 404 4.0E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_23100 e780d74df25e264affe36b9ecb641cca 438 Pfam PF13186 Iron-sulfur cluster-binding domain 316 376 5.7E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_23100 e780d74df25e264affe36b9ecb641cca 438 Pfam PF04055 Radical SAM superfamily 42 209 7.9E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_23100 e780d74df25e264affe36b9ecb641cca 438 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 33 420 2.2E-151 T 11-10-2018 AL538_23100 e780d74df25e264affe36b9ecb641cca 438 Gene3D G3DSA:3.20.20.70 30 425 4.9E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 SUPERFAMILY SSF90123 14 325 1.31E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 Pfam PF00005 ABC transporter 359 509 2.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 3.4E-239 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 Pfam PF00664 ABC transporter transmembrane region 27 293 7.7E-57 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 SUPERFAMILY SSF52540 331 580 1.03E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 Gene3D G3DSA:1.20.1560.10 2 328 8.0E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 SMART SM00382 368 555 2.2E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14605 baa3b9979f797ad86f34999dcf396f2c 582 Gene3D G3DSA:3.40.50.300 329 581 3.7E-95 T 11-10-2018 AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 SUPERFAMILY SSF55031 177 282 3.79E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 Gene3D G3DSA:3.40.630.10 11 361 1.2E-103 T 11-10-2018 AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 Gene3D G3DSA:3.30.70.360 177 286 1.2E-103 T 11-10-2018 AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 PIRSF PIRSF037238 1 373 5.3E-149 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 2.9E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 Pfam PF07687 Peptidase dimerisation domain 175 272 1.1E-21 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_18290 034849cc282bee2378dfc6d9c2a9b2f6 374 SUPERFAMILY SSF53187 2 373 1.31E-41 T 11-10-2018 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 SUPERFAMILY SSF81301 2 119 1.96E-30 T 11-10-2018 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Gene3D G3DSA:1.10.3090.10 122 402 3.9E-43 T 11-10-2018 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 PIRSF PIRSF000813 1 406 2.0E-201 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Pfam PF01966 HD domain 229 313 3.0E-8 T 11-10-2018 IPR006674 HD domain AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Pfam PF01743 Poly A polymerase head domain 3 122 1.7E-19 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 51.735 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Gene3D G3DSA:3.30.460.10 1 121 8.7E-29 T 11-10-2018 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 SUPERFAMILY SSF81891 120 399 1.16E-53 T 11-10-2018 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.267 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AL538_11420 dfc3a210da81599fb61f6b6617d70398 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.8E-12 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 235 248 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 Pfam PF00012 Hsp70 protein 25 349 8.0E-16 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 SUPERFAMILY SSF53067 23 216 2.27E-26 T 11-10-2018 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 SUPERFAMILY SSF53067 230 495 3.38E-26 T 11-10-2018 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 Gene3D G3DSA:3.30.420.40 216 271 5.2E-33 T 11-10-2018 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 27 34 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 Gene3D G3DSA:3.90.640.10 272 351 5.2E-33 T 11-10-2018 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 PRINTS PR00301 70kDa heat shock protein signature 241 251 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 PRINTS PR00301 70kDa heat shock protein signature 23 36 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 PRINTS PR00301 70kDa heat shock protein signature 174 194 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16650 d228d8a8e95974255ea63a8d29d0bf0c 654 Gene3D G3DSA:3.30.420.40 25 215 5.2E-33 T 11-10-2018 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 179 200 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 SUPERFAMILY SSF51735 152 323 1.05E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 Pfam PF00107 Zinc-binding dehydrogenase 190 309 6.9E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 SUPERFAMILY SSF50129 4 186 2.28E-36 T 11-10-2018 IPR011032 GroES-like superfamily AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 Gene3D G3DSA:3.90.180.10 14 345 5.7E-113 T 11-10-2018 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 148 3.4E-12 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 Gene3D G3DSA:3.40.50.720 166 319 5.7E-113 T 11-10-2018 AL538_26700 51927b9e9e0e3087e2dc47f38d006b38 349 SMART SM00829 17 346 1.9E-15 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 SUPERFAMILY SSF52172 2 179 9.36E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 SMART SM00448 1 112 2.1E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 4.0E-98 T 11-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 2.2E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-36 T 11-10-2018 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 SMART SM00862 149 224 1.9E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11315 5caad35943b43d6f6f49bc52834b6220 229 Gene3D G3DSA:1.10.10.10 126 228 1.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04220 d84d5cc910810afd8986a1719a149652 200 Gene3D G3DSA:1.10.530.10 13 177 3.2E-9 T 11-10-2018 AL538_04220 d84d5cc910810afd8986a1719a149652 200 Pfam PF01464 Transglycosylase SLT domain 14 115 9.5E-11 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_04220 d84d5cc910810afd8986a1719a149652 200 SUPERFAMILY SSF53955 17 133 6.06E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 SUPERFAMILY SSF52343 297 424 5.5E-17 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 PRINTS PR00410 Phenol hydroxylase reductase family signature 258 265 1.0E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 PRINTS PR00410 Phenol hydroxylase reductase family signature 315 334 1.0E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 PRINTS PR00410 Phenol hydroxylase reductase family signature 241 253 1.0E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 309 1.0E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 Pfam PF01794 Ferric reductase like transmembrane component 41 169 1.0E-14 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 Pfam PF08022 FAD-binding domain 216 293 1.1E-8 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 Gene3D G3DSA:2.40.30.10 213 306 8.0E-15 T 11-10-2018 AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 Gene3D G3DSA:3.40.50.80 307 429 5.0E-17 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_25055 85cbe88c2bc7d7140f43dc6e3c7e5c54 429 SUPERFAMILY SSF63380 214 305 2.87E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_01590 f46835f6fa0dddd6e3da661e8e41c99e 369 SUPERFAMILY SSF63829 31 344 2.55E-19 T 11-10-2018 AL538_01590 f46835f6fa0dddd6e3da661e8e41c99e 369 Pfam PF03022 Major royal jelly protein 100 345 2.6E-18 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow AL538_01590 f46835f6fa0dddd6e3da661e8e41c99e 369 Gene3D G3DSA:2.120.10.30 28 368 2.3E-99 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.3E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 PIRSF PIRSF000724 1 386 3.3E-134 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.078 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 SUPERFAMILY SSF53748 3 382 1.88E-143 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 165 373 2.3E-150 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 Pfam PF00162 Phosphoglycerate kinase 6 373 3.2E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06930 a19ec1e00f63a216352ee4dbcf59338e 386 Gene3D G3DSA:3.40.50.1260 10 379 2.3E-150 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Pfam PF00570 HRDC domain 213 279 5.4E-8 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 SUPERFAMILY SSF53098 2 210 2.34E-70 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Gene3D G3DSA:1.10.150.80 294 372 6.4E-28 T 11-10-2018 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 6.4E-145 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Gene3D G3DSA:1.10.150.80 196 293 2.0E-15 T 11-10-2018 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 SUPERFAMILY SSF47819 296 372 4.71E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.369 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Gene3D G3DSA:3.30.420.10 1 194 6.8E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 Pfam PF01612 3'-5' exonuclease 3 170 2.2E-41 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 SUPERFAMILY SSF47819 194 301 3.4E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL538_13870 0acba5b42fe486412d12d632cad0be5d 372 SMART SM00474 3 171 6.6E-46 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 Gene3D G3DSA:1.10.760.10 181 313 7.1E-88 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 Gene3D G3DSA:1.10.760.10 51 180 7.1E-88 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 PIRSF PIRSF000294 27 320 5.2E-79 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 Pfam PF03150 Di-haem cytochrome c peroxidase 50 194 2.2E-37 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 SUPERFAMILY SSF46626 36 182 5.94E-38 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 Pfam PF00034 Cytochrome c 203 311 4.4E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_25835 4dc27070315dabb4cfff9f686339cdb5 325 SUPERFAMILY SSF46626 181 319 6.41E-32 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 SUPERFAMILY SSF52833 40 181 9.58E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 Pfam PF00255 Glutathione peroxidase 44 134 1.1E-26 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 7.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 7.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 7.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 Gene3D G3DSA:3.40.30.10 28 181 1.8E-44 T 11-10-2018 AL538_22390 713bb5a49e61a464b0e6e02e3c8783dc 181 PIRSF PIRSF000303 2 181 2.4E-54 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.9E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 5.2E-117 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 SMART SM00382 56 183 4.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Gene3D G3DSA:3.40.50.300 25 186 7.8E-41 T 11-10-2018 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 SUPERFAMILY SSF52540 25 256 1.34E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 4.9E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.297 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 1.0E-38 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 Gene3D G3DSA:1.10.8.60 187 260 5.4E-31 T 11-10-2018 AL538_14915 a9c6750c20b88f2161249e4cc0cc85a6 334 SUPERFAMILY SSF46785 262 332 2.5E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_06095 83130d4c277977c4a6407d729f586a56 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 177 329 1.2E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_06095 83130d4c277977c4a6407d729f586a56 355 SUPERFAMILY SSF55073 181 333 3.22E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_06095 83130d4c277977c4a6407d729f586a56 355 Gene3D G3DSA:3.30.70.270 162 334 3.9E-46 T 11-10-2018 AL538_06095 83130d4c277977c4a6407d729f586a56 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 172 333 2.3E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_06095 83130d4c277977c4a6407d729f586a56 355 SMART SM00267 165 333 2.1E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82693 139 324 1.07E-18 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82714 704 788 6.28E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82714 183 266 1.22E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82693 554 657 5.76E-17 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.3E-72 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82866 290 488 1.29E-45 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 6.1E-275 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82866 794 1010 1.31E-48 T 11-10-2018 AL538_14405 a6d726b06de7e055604cc944d9b65691 1037 SUPERFAMILY SSF82693 40 134 6.54E-25 T 11-10-2018 AL538_21410 cab6615e4c36ad5eec67fa31d3f24d60 741 SUPERFAMILY SSF141868 476 725 2.48E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21410 cab6615e4c36ad5eec67fa31d3f24d60 741 SMART SM00052 470 718 1.5E-62 T 11-10-2018 IPR001633 EAL domain AL538_21410 cab6615e4c36ad5eec67fa31d3f24d60 741 Pfam PF00563 EAL domain 477 713 2.9E-58 T 11-10-2018 IPR001633 EAL domain AL538_21410 cab6615e4c36ad5eec67fa31d3f24d60 741 Gene3D G3DSA:3.20.20.450 462 721 7.3E-75 T 11-10-2018 IPR035919 EAL domain superfamily AL538_08470 dce2bd277c96ca31298705fd86904105 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.765 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 SUPERFAMILY SSF52304 4 145 4.84E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-68 T 11-10-2018 AL538_08470 dce2bd277c96ca31298705fd86904105 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.9E-64 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 Pfam PF01220 Dehydroquinase class II 6 142 2.3E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 Gene3D G3DSA:3.40.50.9100 1 149 9.1E-67 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_08470 dce2bd277c96ca31298705fd86904105 149 PIRSF PIRSF001399 3 149 2.2E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AL538_21560 0c497b45b902a76669bfa1242605097b 893 SUPERFAMILY SSF52540 76 278 9.14E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21560 0c497b45b902a76669bfa1242605097b 893 SUPERFAMILY SSF52540 203 623 8.4E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21560 0c497b45b902a76669bfa1242605097b 893 SMART SM00490 484 582 4.2E-10 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_21560 0c497b45b902a76669bfa1242605097b 893 Pfam PF00176 SNF2 family N-terminal domain 106 285 9.8E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL538_21560 0c497b45b902a76669bfa1242605097b 893 Pfam PF00271 Helicase conserved C-terminal domain 457 582 3.4E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_21560 0c497b45b902a76669bfa1242605097b 893 Gene3D G3DSA:3.40.50.300 445 618 8.0E-29 T 11-10-2018 AL538_21560 0c497b45b902a76669bfa1242605097b 893 Gene3D G3DSA:3.40.50.10810 85 432 7.1E-59 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AL538_21560 0c497b45b902a76669bfa1242605097b 893 SMART SM00487 84 291 1.5E-15 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_21370 73e1be00a49bdc939a57f82575460772 339 SUPERFAMILY SSF103088 190 312 1.96E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 276 295 6.6E-11 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 255 6.6E-11 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 316 6.6E-11 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 73 91 6.6E-11 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 258 275 6.6E-11 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 Gene3D G3DSA:2.60.40.2540 53 199 1.6E-13 T 11-10-2018 AL538_21370 73e1be00a49bdc939a57f82575460772 339 Pfam PF00691 OmpA family 212 307 1.5E-17 T 11-10-2018 IPR006665 OmpA-like domain AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01021 OMPA domain signature 212 234 2.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01021 OMPA domain signature 243 258 2.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_21370 73e1be00a49bdc939a57f82575460772 339 PRINTS PR01021 OMPA domain signature 258 274 2.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_21370 73e1be00a49bdc939a57f82575460772 339 Gene3D G3DSA:3.30.1330.60 202 322 6.7E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_11555 cfdd9b077b35cdc4e07309ec291c507f 245 Gene3D G3DSA:1.10.760.10 26 210 1.8E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_11555 cfdd9b077b35cdc4e07309ec291c507f 245 SUPERFAMILY SSF46626 16 208 6.02E-48 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_11555 cfdd9b077b35cdc4e07309ec291c507f 245 Pfam PF02167 Cytochrome C1 family 34 244 7.2E-15 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AL538_21265 0ca4d3a3ea1170ebbee7c848768a7f85 479 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 42 394 1.2E-45 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL538_21265 0ca4d3a3ea1170ebbee7c848768a7f85 479 SUPERFAMILY SSF53383 6 468 2.85E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_21265 0ca4d3a3ea1170ebbee7c848768a7f85 479 Gene3D G3DSA:3.40.640.10 102 350 3.2E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_21265 0ca4d3a3ea1170ebbee7c848768a7f85 479 Gene3D G3DSA:3.90.1150.170 28 465 3.2E-92 T 11-10-2018 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 Gene3D G3DSA:3.10.310.10 183 373 6.5E-148 T 11-10-2018 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 Gene3D G3DSA:3.10.310.10 13 387 6.5E-148 T 11-10-2018 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 SUPERFAMILY SSF54506 188 393 1.55E-75 T 11-10-2018 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 1.0E-230 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 SUPERFAMILY SSF54506 5 184 2.9E-71 T 11-10-2018 AL538_17035 8221a83cf005146bba6a0e5d8412a91a 395 Pfam PF04303 PrpF protein 8 390 6.6E-175 T 11-10-2018 IPR007400 PrpF protein AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 Pfam PF02378 Phosphotransferase system, EIIC 17 357 5.6E-86 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 Gene3D G3DSA:3.30.1360.60 442 522 6.9E-27 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 6 520 2.6E-293 T 11-10-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00500+2.7.1.208 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 416 506 3.6E-22 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 SUPERFAMILY SSF55604 449 520 6.67E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_17670 ce2f57e79ee0cd47bd8a70d81ef57506 523 Pfam PF00367 phosphotransferase system, EIIB 449 481 9.6E-15 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_12245 02856bf1d3ccbb4cef3d3caf2fd84155 212 SUPERFAMILY SSF54523 113 211 1.1E-10 T 11-10-2018 AL538_12245 02856bf1d3ccbb4cef3d3caf2fd84155 212 Pfam PF03895 YadA-like membrane anchor domain 149 211 8.1E-8 T 11-10-2018 IPR005594 YadA-like, C-terminal AL538_12245 02856bf1d3ccbb4cef3d3caf2fd84155 212 Gene3D G3DSA:3.30.1300.30 104 211 1.4E-14 T 11-10-2018 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 145 2.5E-17 T 11-10-2018 IPR033414 Periplasmic sensor domain AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 470 1.0E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SMART SM00388 243 308 7.7E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SMART SM00448 509 623 1.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Gene3D G3DSA:1.10.287.130 209 306 1.2E-29 T 11-10-2018 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 1.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 1.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 1.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SUPERFAMILY SSF55874 297 472 1.09E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 4.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Gene3D G3DSA:3.30.565.10 307 476 5.2E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SUPERFAMILY SSF47384 229 309 1.53E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SMART SM00387 355 471 8.0E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 SUPERFAMILY SSF52172 508 629 1.18E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Gene3D G3DSA:3.40.50.2300 492 627 2.0E-41 T 11-10-2018 AL538_19375 9892b2fa14ead97cffe80eebb9fe6167 641 Pfam PF00072 Response regulator receiver domain 511 622 1.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 SUPERFAMILY SSF47384 258 326 1.14E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 SUPERFAMILY SSF103190 99 183 4.32E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 Gene3D G3DSA:3.30.565.10 325 479 2.3E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 SMART SM00387 372 479 2.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 Gene3D G3DSA:3.30.450.20 69 173 1.5E-6 T 11-10-2018 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 1.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 SUPERFAMILY SSF55874 316 478 9.69E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 Gene3D G3DSA:1.10.287.130 256 324 3.6E-14 T 11-10-2018 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 SMART SM00388 262 327 2.7E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_17990 16df35b7f41580f5d10fa53b5013410d 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 478 7.4E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 Gene3D G3DSA:1.10.10.10 138 214 6.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 SUPERFAMILY SSF51206 6 137 8.51E-28 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 SMART SM00100 5 124 4.6E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 Pfam PF00027 Cyclic nucleotide-binding domain 25 111 1.1E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 SUPERFAMILY SSF46785 142 216 2.97E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 Gene3D G3DSA:2.60.120.10 4 137 4.5E-28 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 Pfam PF13545 Crp-like helix-turn-helix domain 144 213 8.2E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 SMART SM00419 160 208 4.9E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 1.6E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_15355 4e2aa954739c322c5230b378a64a8be9 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 1.6E-5 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_14610 a41a9706de9d2aba182b6d2fedaebcfa 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 8.3E-113 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL538_14610 a41a9706de9d2aba182b6d2fedaebcfa 335 SUPERFAMILY SSF52540 50 160 2.46E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14610 a41a9706de9d2aba182b6d2fedaebcfa 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.381 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL538_14610 a41a9706de9d2aba182b6d2fedaebcfa 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 2.5E-96 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 AL538_07710 348041fff85d9b3be34920964b3ede75 358 SMART SM01005 233 357 2.0E-65 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 TIGRFAM TIGR00492 alr: alanine racemase 3 356 1.2E-129 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 Hamap MF_01201 Alanine racemase. 1 357 35.201 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.9E-71 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 SUPERFAMILY SSF51419 8 234 8.24E-72 T 11-10-2018 IPR029066 PLP-binding barrel AL538_07710 348041fff85d9b3be34920964b3ede75 358 Gene3D G3DSA:2.40.37.10 8 352 5.3E-133 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_07710 348041fff85d9b3be34920964b3ede75 358 Gene3D G3DSA:3.20.20.10 10 217 5.3E-133 T 11-10-2018 IPR029066 PLP-binding barrel AL538_07710 348041fff85d9b3be34920964b3ede75 358 SUPERFAMILY SSF50621 226 356 8.02E-47 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_07710 348041fff85d9b3be34920964b3ede75 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 6.3E-42 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 26 42 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 120 132 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 192 219 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 339 352 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 249 264 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 287 304 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 60 78 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 155 166 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07710 348041fff85d9b3be34920964b3ede75 358 PRINTS PR00992 Alanine racemase signature 266 281 6.1E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_01275 e63b7f938284ede263b89f3241af1539 203 Gene3D G3DSA:1.10.3820.10 4 190 9.6E-31 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL538_01275 e63b7f938284ede263b89f3241af1539 203 SUPERFAMILY SSF48695 34 184 8.38E-22 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_01275 e63b7f938284ede263b89f3241af1539 203 PIRSF PIRSF000013 2 192 1.4E-9 T 11-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL538_01275 e63b7f938284ede263b89f3241af1539 203 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 13 182 3.6E-29 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL538_01390 37810fa3d73d86382f93005f2feef0c2 128 SUPERFAMILY SSF51182 10 127 1.18E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_01390 37810fa3d73d86382f93005f2feef0c2 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 5.0E-58 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL538_01390 37810fa3d73d86382f93005f2feef0c2 128 Pfam PF06339 Ectoine synthase 1 127 2.5E-61 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL538_01390 37810fa3d73d86382f93005f2feef0c2 128 Gene3D G3DSA:2.60.120.10 1 116 2.8E-45 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01390 37810fa3d73d86382f93005f2feef0c2 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.334 T 11-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:3.10.20.310 347 424 5.4E-26 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Pfam PF01103 Surface antigen 448 804 1.8E-90 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:3.10.20.310 264 346 1.4E-15 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.819 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:2.40.160.50 425 804 4.7E-121 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Pfam PF07244 Surface antigen variable number repeat 266 344 2.6E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Pfam PF07244 Surface antigen variable number repeat 176 263 2.4E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Pfam PF07244 Surface antigen variable number repeat 347 420 4.3E-17 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:3.10.20.310 18 91 3.2E-20 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 Gene3D G3DSA:3.10.20.310 175 263 4.1E-22 T 11-10-2018 AL538_05435 008eee15351b6897d55f9cfa52158287 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 8.1E-278 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL538_05435 008eee15351b6897d55f9cfa52158287 804 PIRSF PIRSF006076 1 804 1.2E-244 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AL538_25610 42f9bb6ae1513d8a0387d4ab2e2a2852 489 Gene3D G3DSA:3.20.20.450 241 488 3.3E-74 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25610 42f9bb6ae1513d8a0387d4ab2e2a2852 489 SMART SM00052 241 483 4.3E-73 T 11-10-2018 IPR001633 EAL domain AL538_25610 42f9bb6ae1513d8a0387d4ab2e2a2852 489 Pfam PF12792 CSS motif domain associated with EAL 33 156 8.0E-7 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AL538_25610 42f9bb6ae1513d8a0387d4ab2e2a2852 489 SUPERFAMILY SSF141868 247 485 8.37E-71 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25610 42f9bb6ae1513d8a0387d4ab2e2a2852 489 Pfam PF00563 EAL domain 247 478 2.2E-61 T 11-10-2018 IPR001633 EAL domain AL538_05465 ff962d506d71916fc16e149adadc84fb 243 Gene3D G3DSA:3.40.1160.10 3 243 1.8E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_05465 ff962d506d71916fc16e149adadc84fb 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.0E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL538_05465 ff962d506d71916fc16e149adadc84fb 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AL538_05465 ff962d506d71916fc16e149adadc84fb 243 Pfam PF00696 Amino acid kinase family 11 219 4.6E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_05465 ff962d506d71916fc16e149adadc84fb 243 SUPERFAMILY SSF53633 7 239 9.03E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_05465 ff962d506d71916fc16e149adadc84fb 243 PIRSF PIRSF005650 4 243 2.5E-89 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AL538_16925 f58f2d016f059bf1d2841b4b6a2745d3 417 Pfam PF05036 Sporulation related domain 336 387 1.9E-5 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_16925 f58f2d016f059bf1d2841b4b6a2745d3 417 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 253 5.5E-36 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_16925 f58f2d016f059bf1d2841b4b6a2745d3 417 SUPERFAMILY SSF110997 336 389 1.57E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_16925 f58f2d016f059bf1d2841b4b6a2745d3 417 Gene3D G3DSA:1.25.40.590 48 204 3.4E-38 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AL538_16925 f58f2d016f059bf1d2841b4b6a2745d3 417 Pfam PF09850 Type VI secretion system protein DotU 53 253 3.9E-38 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 SUPERFAMILY SSF160544 238 345 3.79E-33 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 8.4E-134 T 11-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 4.5E-114 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.7E-44 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.7E-44 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.7E-44 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.7E-44 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.7E-44 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_15205 ea8e92f7597e1a6f4057f2843fc8bb8a 350 Gene3D G3DSA:3.40.1690.10 211 350 7.5E-55 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_04090 87459bf6cb4c7d65ef84fbe713fe5928 151 Gene3D G3DSA:3.90.1170.40 1 149 1.0E-53 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL538_04090 87459bf6cb4c7d65ef84fbe713fe5928 151 SUPERFAMILY SSF54690 4 149 4.58E-55 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL538_04090 87459bf6cb4c7d65ef84fbe713fe5928 151 Pfam PF02391 MoaE protein 7 119 1.4E-36 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Pfam PF07731 Multicopper oxidase 363 459 2.5E-26 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Gene3D G3DSA:2.60.40.420 10 152 3.1E-45 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Gene3D G3DSA:2.60.40.420 153 290 5.6E-23 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Gene3D G3DSA:2.60.40.420 308 460 5.4E-37 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 SUPERFAMILY SSF49503 158 280 1.51E-16 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Pfam PF00394 Multicopper oxidase 197 281 3.1E-8 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 Pfam PF07732 Multicopper oxidase 45 156 1.9E-38 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 SUPERFAMILY SSF49503 308 459 5.5E-34 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 SUPERFAMILY SSF49503 33 155 1.75E-38 T 11-10-2018 IPR008972 Cupredoxin AL538_09355 34f0a7b880ecf893a9e9cee6418a71ba 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AL538_08345 79039ffb75033099defad97d94127f36 96 SUPERFAMILY SSF50129 1 95 2.94E-31 T 11-10-2018 IPR011032 GroES-like superfamily AL538_08345 79039ffb75033099defad97d94127f36 96 SMART SM00883 2 95 5.2E-50 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 Gene3D G3DSA:2.30.33.40 1 96 3.5E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.127 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_08345 79039ffb75033099defad97d94127f36 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AL538_07685 c4809651d1756ae778e27fbbdd6e2521 151 Gene3D G3DSA:1.10.10.10 3 89 3.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07685 c4809651d1756ae778e27fbbdd6e2521 151 SUPERFAMILY SSF46785 11 144 5.63E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_07685 c4809651d1756ae778e27fbbdd6e2521 151 Gene3D G3DSA:3.30.1490.190 90 150 3.3E-16 T 11-10-2018 AL538_07685 c4809651d1756ae778e27fbbdd6e2521 151 Pfam PF01475 Ferric uptake regulator family 19 138 3.6E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL538_09200 e9672f4fb7031b93bff967e00a37a48b 89 Gene3D G3DSA:3.10.20.30 1 89 1.7E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_09200 e9672f4fb7031b93bff967e00a37a48b 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL538_09200 e9672f4fb7031b93bff967e00a37a48b 89 SUPERFAMILY SSF54292 1 87 2.88E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_09200 e9672f4fb7031b93bff967e00a37a48b 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 78 1.7E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_04785 9bbd15e0a1f497c5c6126c292f3a058b 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.96 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL538_04785 9bbd15e0a1f497c5c6126c292f3a058b 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.9E-72 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AL538_04785 9bbd15e0a1f497c5c6126c292f3a058b 181 Gene3D G3DSA:3.40.50.2020 1 181 6.5E-66 T 11-10-2018 AL538_04785 9bbd15e0a1f497c5c6126c292f3a058b 181 Pfam PF00156 Phosphoribosyl transferase domain 30 151 7.9E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL538_04785 9bbd15e0a1f497c5c6126c292f3a058b 181 SUPERFAMILY SSF53271 11 178 6.19E-52 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_13410 4d93c225fe017a3e2a0ef3b55eb31e22 141 Gene3D G3DSA:1.20.58.300 1 113 5.2E-7 T 11-10-2018 AL538_13410 4d93c225fe017a3e2a0ef3b55eb31e22 141 SUPERFAMILY SSF140566 1 113 7.32E-23 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AL538_13410 4d93c225fe017a3e2a0ef3b55eb31e22 141 Pfam PF05130 FlgN protein 2 131 1.2E-25 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 Gene3D G3DSA:1.10.287.130 168 258 4.2E-6 T 11-10-2018 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 SUPERFAMILY SSF52172 561 681 4.7E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 Gene3D G3DSA:3.30.565.10 259 411 4.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 410 1.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 SUPERFAMILY SSF55874 250 415 2.36E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 SUPERFAMILY SSF47384 171 232 1.04E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 Gene3D G3DSA:3.40.50.2300 558 681 1.3E-35 T 11-10-2018 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 371 1.2E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 Pfam PF00072 Response regulator receiver domain 565 677 7.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 SMART SM00448 563 677 4.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23270 fb42bdaa131a25852dfca2324db8c0a6 681 SMART SM00387 305 413 1.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 SUPERFAMILY SSF51556 72 370 2.04E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 40.441 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 SUPERFAMILY SSF51338 1 412 1.44E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 3.5E-144 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 Pfam PF01979 Amidohydrolase family 70 408 4.1E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 Gene3D G3DSA:3.20.20.140 73 371 1.9E-154 T 11-10-2018 AL538_02150 41f48cb0f8fa1193d21b732e507fa071 416 Gene3D G3DSA:2.30.40.10 7 408 1.9E-154 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 Gene3D G3DSA:3.30.1360.60 3 78 2.7E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 7.0E-34 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 8.2E-208 T 11-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.4E-17 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 SUPERFAMILY SSF55604 9 81 3.53E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_13010 ce81bc822a87fe2f16a70c2ed3f0c918 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.8E-14 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.1E-74 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 Gene3D G3DSA:3.30.420.10 2 159 1.1E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 SUPERFAMILY SSF53098 3 156 4.05E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.3E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.3E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.3E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.3E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.3E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.847 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14900 3853222fb241b040f30c7da0ac5a16f9 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.2E-63 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Gene3D G3DSA:3.40.1110.10 474 591 1.0E-83 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 6.1E-39 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 523 8.4E-96 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 3.0E-85 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 9.2E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 9.2E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 9.2E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Pfam PF00122 E1-E2 ATPase 263 443 1.2E-51 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 759 3.2E-119 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Gene3D G3DSA:3.30.70.100 70 140 5.1E-14 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 SUPERFAMILY SSF55008 72 136 1.11E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Pfam PF00403 Heavy-metal-associated domain 77 133 1.6E-11 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.8E-177 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Gene3D G3DSA:3.40.50.1000 444 709 1.0E-83 T 11-10-2018 IPR023214 HAD superfamily AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.9E-27 T 11-10-2018 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 SUPERFAMILY SSF81653 265 362 2.35E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 SUPERFAMILY SSF81665 215 745 1.03E-20 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 SUPERFAMILY SSF56784 462 757 1.21E-51 T 11-10-2018 IPR036412 HAD-like superfamily AL538_14505 f3dcf79862c9209220981b9c6062b5fa 767 Gene3D G3DSA:2.70.150.20 262 367 1.1E-32 T 11-10-2018 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 SUPERFAMILY SSF118116 502 684 6.54E-38 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Gene3D G3DSA:3.30.230.10 217 329 3.1E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 SMART SM01340 212 330 6.4E-60 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Gene3D G3DSA:2.30.42.20 502 683 8.7E-55 T 11-10-2018 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Pfam PF08676 MutL C terminal dimerisation domain 502 641 1.7E-29 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 3.0E-40 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 8.5E-11 T 11-10-2018 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 SUPERFAMILY SSF54211 191 330 2.05E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 SUPERFAMILY SSF55874 1 207 2.49E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Gene3D G3DSA:3.30.565.10 1 216 5.7E-70 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Gene3D G3DSA:3.30.1370.100 545 639 8.7E-55 T 11-10-2018 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.2E-102 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 685 25.259 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AL538_08105 bbfbf7bf5c8ea3d85d71390d5269ffb8 687 SMART SM00853 504 647 1.6E-17 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 Gene3D G3DSA:3.40.50.720 2 206 3.1E-79 T 11-10-2018 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 Gene3D G3DSA:1.10.1040.10 208 382 6.0E-65 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.027 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 SUPERFAMILY SSF48179 205 382 1.02E-45 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 SUPERFAMILY SSF51735 3 203 2.44E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 375 1.7E-59 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL538_11335 86695f8394e8deb39682f61429e9c2fc 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.8E-23 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_08620 e5c36fe068f3d2832317ab353d1b7131 190 SMART SM00986 27 183 2.7E-31 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_08620 e5c36fe068f3d2832317ab353d1b7131 190 Pfam PF03167 Uracil DNA glycosylase superfamily 30 179 3.6E-27 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_08620 e5c36fe068f3d2832317ab353d1b7131 190 SMART SM00987 27 183 2.7E-31 T 11-10-2018 AL538_08620 e5c36fe068f3d2832317ab353d1b7131 190 Gene3D G3DSA:3.40.470.10 1 190 2.1E-75 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_08620 e5c36fe068f3d2832317ab353d1b7131 190 SUPERFAMILY SSF52141 2 189 1.96E-58 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_15310 7f6ef66512cc9bfe785bd7ee791bd945 127 SUPERFAMILY SSF69118 4 122 1.13E-36 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL538_15310 7f6ef66512cc9bfe785bd7ee791bd945 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.0E-22 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL538_15310 7f6ef66512cc9bfe785bd7ee791bd945 127 Gene3D G3DSA:1.20.1290.10 3 126 9.8E-41 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AL538_00240 6ac339efac19350ebcd3c8d8e79a9f46 363 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 220 5.8E-25 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_00240 6ac339efac19350ebcd3c8d8e79a9f46 363 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 224 336 6.9E-14 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_00240 6ac339efac19350ebcd3c8d8e79a9f46 363 Gene3D G3DSA:2.40.160.60 22 362 2.4E-55 T 11-10-2018 AL538_00240 6ac339efac19350ebcd3c8d8e79a9f46 363 SUPERFAMILY SSF56935 22 337 1.46E-50 T 11-10-2018 AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 Gene3D G3DSA:3.40.50.300 245 456 4.8E-65 T 11-10-2018 AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 Gene3D G3DSA:3.40.50.1010 3 155 4.5E-28 T 11-10-2018 AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 SMART SM00670 7 141 1.0E-11 T 11-10-2018 IPR002716 PIN domain AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 Pfam PF13638 PIN domain 9 150 1.9E-35 T 11-10-2018 IPR002716 PIN domain AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 SUPERFAMILY SSF52540 163 437 6.46E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 SUPERFAMILY SSF88723 7 160 1.86E-14 T 11-10-2018 IPR029060 PIN-like domain superfamily AL538_07430 a2408e41c55083bcfe117b17893df9ae 458 Pfam PF02562 PhoH-like protein 248 452 8.5E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-8 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.8E-8 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-8 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.8E-8 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.8E-15 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.8E-15 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.8E-15 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.8E-15 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-15 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Gene3D G3DSA:3.30.413.10 632 797 7.7E-32 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 PIRSF PIRSF037149 1 836 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Gene3D G3DSA:3.50.50.60 110 246 6.5E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 SUPERFAMILY SSF51905 3 184 6.07E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 SUPERFAMILY SSF55124 503 630 1.74E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 771 4.1E-15 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Gene3D G3DSA:3.50.50.60 7 283 6.5E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 SUPERFAMILY SSF51905 144 310 6.91E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 SUPERFAMILY SSF56014 634 809 2.36E-47 T 11-10-2018 AL538_24635 6ac9aaf34175815b5546d733a87f63f8 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 1.8E-52 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 1.2E-25 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 PIRSF PIRSF005457 1 252 2.3E-96 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 Gene3D G3DSA:3.60.15.10 1 252 1.7E-90 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.688 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 3.6E-102 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 SUPERFAMILY SSF56281 2 252 6.68E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_05360 a7083da3bcf5a9844762a43a37440b6e 252 SMART SM00849 12 166 7.3E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_12065 edca0f31890570ff38c1faa1b5308a6e 333 SUPERFAMILY SSF51261 83 271 8.37E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_12065 edca0f31890570ff38c1faa1b5308a6e 333 Gene3D G3DSA:2.70.70.10 122 275 2.1E-41 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_12065 edca0f31890570ff38c1faa1b5308a6e 333 Pfam PF01551 Peptidase family M23 174 269 1.8E-29 T 11-10-2018 IPR016047 Peptidase M23 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 PIRSF PIRSF001467 1 164 4.8E-26 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 SUPERFAMILY SSF50891 2 162 3.36E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 7.8E-46 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_19300 0c3e686269c1958e54b96fc0f53106e7 164 Gene3D G3DSA:2.40.100.10 1 163 2.4E-62 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_21660 a234e87bbfcd1bf600807693ddaab409 218 SUPERFAMILY SSF48498 91 208 3.02E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_21660 a234e87bbfcd1bf600807693ddaab409 218 SUPERFAMILY SSF46689 10 85 3.54E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_21660 a234e87bbfcd1bf600807693ddaab409 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_21660 a234e87bbfcd1bf600807693ddaab409 218 Gene3D G3DSA:1.10.357.10 1 217 7.7E-59 T 11-10-2018 AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF03880 DbpA RNA binding domain 386 456 4.7E-21 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.40.50.300 211 388 8.7E-45 T 11-10-2018 AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.40.50.300 2 210 1.0E-74 T 11-10-2018 AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 SMART SM00487 23 220 8.0E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 SMART SM00490 257 338 1.1E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 SUPERFAMILY SSF52540 73 357 8.05E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.6E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_10985 98d05600191438bd00f5b7f50869fc5c 459 Gene3D G3DSA:3.30.70.330 389 458 3.4E-18 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 Gene3D G3DSA:2.40.170.20 147 641 2.3E-132 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 Gene3D G3DSA:2.170.130.10 40 145 2.4E-38 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 Pfam PF00593 TonB dependent receptor 231 639 2.4E-49 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 SUPERFAMILY SSF56935 32 641 2.14E-97 T 11-10-2018 AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 624 641 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_23060 8e1d2ac3950beb6a436d960a68464a2b 641 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 140 2.9E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 11-10-2018 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 Pfam PF13377 Periplasmic binding protein-like domain 168 309 3.9E-15 T 11-10-2018 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 SUPERFAMILY SSF53822 63 306 6.09E-58 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 Gene3D G3DSA:3.40.50.2300 68 303 1.7E-64 T 11-10-2018 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 11-10-2018 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 SMART SM00354 4 74 2.1E-32 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 Gene3D G3DSA:3.40.50.2300 163 279 1.7E-64 T 11-10-2018 AL538_13005 3d137a19179b5b2f8ca12514a1559baa 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 6.3E-139 T 11-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Pfam PF00271 Helicase conserved C-terminal domain 232 325 4.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Gene3D G3DSA:3.40.50.300 203 449 1.2E-44 T 11-10-2018 AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 348 7.6E-115 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 SUPERFAMILY SSF52540 60 338 1.37E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Gene3D G3DSA:1.10.10.10 498 640 8.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 SMART SM00487 15 211 4.0E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Pfam PF00270 DEAD/DEAH box helicase 21 181 6.4E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Pfam PF16124 RecQ zinc-binding 512 559 2.0E-8 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 SMART SM00490 245 326 2.4E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 134 143 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AL538_05620 768134c1164fba8a99cfe6fdccc3e83c 641 Gene3D G3DSA:3.40.50.300 1 201 5.8E-69 T 11-10-2018 AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 SUPERFAMILY SSF46785 4 114 3.86E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 SUPERFAMILY SSF53850 96 247 3.62E-6 T 11-10-2018 AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 Gene3D G3DSA:1.10.10.10 4 89 9.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01155 0aaf752cad48be9f3d2c4c20ae4cb2fb 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.0E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06525 c13811d859c9ce84ea416d35fdc9e028 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.668 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL538_06525 c13811d859c9ce84ea416d35fdc9e028 204 Pfam PF01121 Dephospho-CoA kinase 4 179 7.7E-73 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL538_06525 c13811d859c9ce84ea416d35fdc9e028 204 SUPERFAMILY SSF52540 1 193 2.01E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06525 c13811d859c9ce84ea416d35fdc9e028 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 179 6.4E-66 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AL538_06525 c13811d859c9ce84ea416d35fdc9e028 204 Gene3D G3DSA:3.40.50.300 1 204 8.3E-69 T 11-10-2018 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 Gene3D G3DSA:2.40.10.10 33 143 3.3E-33 T 11-10-2018 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 SMART SM00228 257 339 2.2E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 113 133 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 153 177 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 92 104 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 5.8E-47 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 Pfam PF13180 PDZ domain 258 347 5.9E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 SUPERFAMILY SSF50156 240 347 1.97E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 2.3E-165 T 11-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 Gene3D G3DSA:2.30.42.10 257 355 1.7E-23 T 11-10-2018 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 Gene3D G3DSA:2.40.10.10 145 256 1.4E-35 T 11-10-2018 AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 SUPERFAMILY SSF50494 44 266 2.54E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL538_11510 e032a75d33f62d17e50237a822ef07c0 355 Pfam PF13365 Trypsin-like peptidase domain 83 216 4.3E-33 T 11-10-2018 AL538_17345 fc7315540719f1c89255d9e69a1b662e 267 SUPERFAMILY SSF46955 10 101 3.57E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_17345 fc7315540719f1c89255d9e69a1b662e 267 Gene3D G3DSA:1.10.1660.10 4 79 6.4E-25 T 11-10-2018 AL538_17345 fc7315540719f1c89255d9e69a1b662e 267 Pfam PF13411 MerR HTH family regulatory protein 10 77 4.0E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_17345 fc7315540719f1c89255d9e69a1b662e 267 SMART SM00422 10 79 4.4E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Gene3D G3DSA:3.40.50.2300 1 117 4.1E-9 T 11-10-2018 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 SMART SM00382 157 301 4.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Gene3D G3DSA:1.10.8.60 309 385 2.1E-24 T 11-10-2018 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 SUPERFAMILY SSF52540 137 378 1.08E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Gene3D G3DSA:1.10.10.60 419 488 1.6E-13 T 11-10-2018 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 SUPERFAMILY SSF52172 6 182 3.91E-5 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 8.5E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.6E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 SUPERFAMILY SSF46689 349 486 3.58E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Gene3D G3DSA:3.40.50.300 125 308 9.4E-66 T 11-10-2018 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_05135 24c8979f3ac3f88524f698cd2e6e1ab9 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 2.1E-29 T 11-10-2018 IPR010518 Flagellar regulatory FleQ AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Gene3D G3DSA:3.30.450.20 300 427 3.3E-15 T 11-10-2018 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Pfam PF13426 PAS domain 324 428 3.1E-6 T 11-10-2018 IPR000014 PAS domain AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 SUPERFAMILY SSF55785 325 438 2.09E-13 T 11-10-2018 IPR035965 PAS domain superfamily AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 SUPERFAMILY SSF55874 530 684 1.06E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 SMART SM00086 389 429 1.0E-5 T 11-10-2018 IPR001610 PAC motif AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Gene3D G3DSA:1.10.287.130 446 532 1.3E-13 T 11-10-2018 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 PIRSF PIRSF036431 320 686 1.6E-103 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 PIRSF PIRSF036431 1 327 1.9E-42 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 SUPERFAMILY SSF47384 457 532 1.33E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 3.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 3.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 3.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Gene3D G3DSA:3.30.450.20 59 174 3.5E-12 T 11-10-2018 AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Gene3D G3DSA:3.30.565.10 537 686 3.7E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 6.3E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 4.0E-15 T 11-10-2018 IPR000014 PAS domain AL538_20640 5f71f05326a4e842adab6af6ff936b81 686 SMART SM00387 577 686 1.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 Gene3D G3DSA:3.60.15.10 494 732 1.9E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 131 717 3.3E-114 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 684 1.1E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 SMART SM00849 506 689 6.4E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 SUPERFAMILY SSF56281 494 739 1.49E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 Pfam PF03772 Competence protein 208 466 7.4E-49 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AL538_14600 5bc87f58bb435e5bf3ebbb9a36552b2d 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 7.2E-24 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AL538_17825 676ddeb75512c1fb34c00d276bb6aa89 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL538_17825 676ddeb75512c1fb34c00d276bb6aa89 271 Gene3D G3DSA:3.90.226.10 1 271 2.9E-56 T 11-10-2018 AL538_17825 676ddeb75512c1fb34c00d276bb6aa89 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 239 2.6E-33 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_17825 676ddeb75512c1fb34c00d276bb6aa89 271 SUPERFAMILY SSF52096 2 245 5.18E-47 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 3 123 3.9E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02254 TrkA-N domain 235 350 5.0E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 2 139 1.6E-51 T 11-10-2018 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Pfam PF02080 TrkA-C domain 391 449 3.0E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 1 151 8.06E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 8.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 8.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 8.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 8.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 8.0E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF116726 366 437 3.27E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.40.50.720 233 366 3.0E-38 T 11-10-2018 AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 SUPERFAMILY SSF51735 232 376 2.58E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09470 70da2c0614f8f5be2c4d47910c017700 458 Gene3D G3DSA:3.30.70.1450 367 458 1.4E-28 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_10605 386e2335ac2da5fc2e41ab1c1c69b4c0 368 SUPERFAMILY SSF53383 10 365 4.22E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_10605 386e2335ac2da5fc2e41ab1c1c69b4c0 368 Gene3D G3DSA:3.90.1150.10 249 368 6.3E-34 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_10605 386e2335ac2da5fc2e41ab1c1c69b4c0 368 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 362 1.1E-118 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL538_10605 386e2335ac2da5fc2e41ab1c1c69b4c0 368 PIRSF PIRSF000390 2 366 3.7E-103 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL538_10605 386e2335ac2da5fc2e41ab1c1c69b4c0 368 Gene3D G3DSA:3.40.640.10 1 247 1.4E-84 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 562 5.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 5.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 576 5.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 5.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SMART SM00387 507 623 2.5E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 620 2.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SMART SM00448 770 887 8.2E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SMART SM00448 932 1049 1.8E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SMART SM00388 395 460 8.8E-26 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Pfam PF00512 His Kinase A (phospho-acceptor) domain 395 460 1.3E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SUPERFAMILY SSF47384 383 460 2.94E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Pfam PF00072 Response regulator receiver domain 772 887 6.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Pfam PF00072 Response regulator receiver domain 934 1049 4.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:3.40.50.2300 827 895 1.3E-23 T 11-10-2018 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:3.40.50.2300 990 1052 8.1E-23 T 11-10-2018 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:3.40.50.12330 923 989 8.9E-22 T 11-10-2018 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:3.40.50.12330 762 826 5.4E-20 T 11-10-2018 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SUPERFAMILY SSF52172 769 890 4.55E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SUPERFAMILY SSF55874 449 619 2.36E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:1.10.287.130 358 458 3.2E-30 T 11-10-2018 AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 SUPERFAMILY SSF52172 931 1052 8.11E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL538_01015 ff3a0c547d0c5e4e79bcf56facdbdc89 1053 Gene3D G3DSA:3.30.565.10 460 623 4.6E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 Gene3D G3DSA:2.40.50.940 226 355 1.3E-16 T 11-10-2018 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 358 2.2E-163 T 11-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 Pfam PF08402 TOBE domain 279 354 1.2E-4 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 Gene3D G3DSA:3.40.50.300 7 225 1.1E-68 T 11-10-2018 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 Pfam PF00005 ABC transporter 23 165 2.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 SUPERFAMILY SSF52540 8 247 5.19E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 SUPERFAMILY SSF50331 240 357 6.46E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 Gene3D G3DSA:2.40.50.140 286 349 1.3E-16 T 11-10-2018 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_20905 5607f67a9235ee7afd20fe818b3259a0 368 SMART SM00382 32 215 3.9E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 SMART SM00089 226 314 0.27 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 SMART SM00089 130 221 0.35 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 SMART SM00089 36 126 3.4 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 SUPERFAMILY SSF49299 222 313 3.27E-7 T 11-10-2018 IPR035986 PKD domain superfamily AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 Gene3D G3DSA:2.60.40.10 43 123 6.8E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 Gene3D G3DSA:2.60.40.10 129 223 3.3E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 Gene3D G3DSA:2.60.40.10 224 319 4.4E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19465 7e1016e5354e1c3a6dfc1940a7e9c6af 439 SUPERFAMILY SSF49299 129 217 1.96E-5 T 11-10-2018 IPR035986 PKD domain superfamily AL538_19875 976be4a44207ea668f098664849d7c58 271 Gene3D G3DSA:2.60.120.10 9 103 8.5E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_19875 976be4a44207ea668f098664849d7c58 271 Gene3D G3DSA:1.10.10.60 166 270 2.8E-20 T 11-10-2018 AL538_19875 976be4a44207ea668f098664849d7c58 271 SUPERFAMILY SSF46689 224 267 1.75E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19875 976be4a44207ea668f098664849d7c58 271 Pfam PF12833 Helix-turn-helix domain 192 265 1.9E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19875 976be4a44207ea668f098664849d7c58 271 SMART SM00342 183 265 3.3E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19875 976be4a44207ea668f098664849d7c58 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_19875 976be4a44207ea668f098664849d7c58 271 SUPERFAMILY SSF51182 30 190 9.56E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 SMART SM00642 203 656 7.2E-80 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 Gene3D G3DSA:3.20.20.80 189 438 6.7E-43 T 11-10-2018 AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 PIRSF PIRSF036917 1 694 0.0 T 11-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 SUPERFAMILY SSF51445 190 665 2.79E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 1.0E-38 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_09720 e60992c75c4072fb3cf4095e76f6b0c3 694 Gene3D G3DSA:3.20.20.80 439 664 9.7E-38 T 11-10-2018 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 3.1E-86 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Pfam PF04539 Sigma-70 region 3 100 161 1.8E-11 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Pfam PF04542 Sigma-70 region 2 19 91 2.3E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Gene3D G3DSA:1.20.140.160 90 239 2.1E-45 T 11-10-2018 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 SUPERFAMILY SSF88659 92 164 2.44E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 PIRSF PIRSF000770 2 243 6.9E-38 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 240 62.884 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 SUPERFAMILY SSF88946 6 91 9.68E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Gene3D G3DSA:1.10.1740.10 4 88 1.8E-28 T 11-10-2018 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 4.6E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_05025 a27dc4648af1269a82543ab4abd000c8 244 SUPERFAMILY SSF88659 155 239 9.53E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_20190 551784cb51c4ebb4cbded78e10bbce87 305 SUPERFAMILY SSF103481 39 138 3.01E-12 T 11-10-2018 AL538_20190 551784cb51c4ebb4cbded78e10bbce87 305 SUPERFAMILY SSF103481 188 285 7.19E-13 T 11-10-2018 AL538_20190 551784cb51c4ebb4cbded78e10bbce87 305 Pfam PF00892 EamA-like transporter family 9 135 1.4E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_20190 551784cb51c4ebb4cbded78e10bbce87 305 Pfam PF00892 EamA-like transporter family 154 282 6.0E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_01540 ea17616dd38c7090fcf62e68d889ceb5 83 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 8 76 1.4E-19 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL538_01540 ea17616dd38c7090fcf62e68d889ceb5 83 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 80 3.0E-23 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL538_01540 ea17616dd38c7090fcf62e68d889ceb5 83 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 83 26.117 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 Pfam PF00005 ABC transporter 35 186 8.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 SMART SM00382 43 236 1.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 Gene3D G3DSA:3.40.50.300 5 328 1.4E-95 T 11-10-2018 AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 SUPERFAMILY SSF52540 8 258 2.78E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 1.2E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_01700 020fd8e6362b47fbb6409c79c3a8a1df 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.3E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 SUPERFAMILY SSF53720 2 449 9.95E-124 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.335 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 7.6E-228 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 Gene3D G3DSA:3.40.309.10 247 436 1.1E-140 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 Gene3D G3DSA:3.40.605.10 7 448 1.1E-140 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL538_08000 6fe21d75a442bbb814e6daac94cf73f3 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 4.1E-122 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82693 39 130 5.23E-19 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.2090.10 692 780 3.7E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82866 291 486 7.72E-46 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 598 612 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 35 53 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 7 31 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 1.4E-60 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82866 780 1000 4.58E-40 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Pfam PF00873 AcrB/AcrD/AcrF family 2 998 1.7E-236 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.2090.10 176 266 3.7E-262 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82714 180 262 1.7E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.70.1430 37 788 3.7E-262 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82693 137 321 2.88E-15 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:1.20.1640.10 7 498 3.7E-262 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:1.20.1640.10 499 995 3.7E-262 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.70.1430 553 640 3.7E-262 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82714 695 777 1.31E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 SUPERFAMILY SSF82693 551 643 3.77E-10 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.70.1440 641 837 3.7E-262 T 11-10-2018 AL538_03790 555cbda2b93d83e0a095608e19e09087 1016 Gene3D G3DSA:3.30.70.1320 131 323 3.7E-262 T 11-10-2018 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 SMART SM00862 158 234 3.4E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 Gene3D G3DSA:1.10.10.10 137 237 4.6E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 SMART SM00448 3 113 8.6E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 Gene3D G3DSA:3.40.50.2300 1 136 9.8E-34 T 11-10-2018 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 SUPERFAMILY SSF46894 134 235 1.42E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_14835 54c0888d89efc4e5edc778d0e96f7fde 237 SUPERFAMILY SSF52172 2 124 1.42E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Gene3D G3DSA:3.30.160.40 222 307 2.1E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.0E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 SUPERFAMILY SSF53850 6 220 3.47E-86 T 11-10-2018 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 3.2E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Gene3D G3DSA:3.40.190.10 7 211 1.0E-85 T 11-10-2018 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 PIRSF PIRSF001438 1 312 2.9E-123 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.2E-19 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.204 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 3.9E-115 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 Gene3D G3DSA:3.40.190.10 104 203 1.0E-85 T 11-10-2018 AL538_09145 f40f74fd0e73c4bf6fa682f64fd474f2 312 SUPERFAMILY SSF54782 221 310 1.83E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_10800 d79a8bd90c91dccc8a57aa1bec73a2d4 181 Gene3D G3DSA:3.30.70.1070 100 179 1.9E-27 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_10800 d79a8bd90c91dccc8a57aa1bec73a2d4 181 SUPERFAMILY SSF110997 105 178 2.48E-17 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_10800 d79a8bd90c91dccc8a57aa1bec73a2d4 181 Pfam PF05036 Sporulation related domain 107 176 7.5E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 SUPERFAMILY SSF52518 332 525 1.14E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 SMART SM00861 353 524 1.7E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 SUPERFAMILY SSF52922 532 663 6.15E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 8.7E-48 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Gene3D G3DSA:3.40.50.970 325 536 9.1E-85 T 11-10-2018 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Gene3D G3DSA:3.40.50.920 537 663 2.7E-47 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Pfam PF02780 Transketolase, C-terminal domain 546 654 3.4E-21 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 SUPERFAMILY SSF52518 5 319 4.55E-120 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 4.2E-166 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_26145 ed667ecf9f2de701ef8eb834695593c5 663 Gene3D G3DSA:3.40.50.970 2 324 2.7E-131 T 11-10-2018 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 SUPERFAMILY SSF53474 411 659 2.21E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 Pfam PF00326 Prolyl oligopeptidase family 451 665 2.1E-56 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 Gene3D G3DSA:2.130.10.120 72 397 2.5E-148 T 11-10-2018 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 SUPERFAMILY SSF50993 20 387 1.07E-28 T 11-10-2018 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 Gene3D G3DSA:3.40.50.1820 21 660 2.5E-148 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 19 387 4.4E-24 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 436 454 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 577 592 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 462 486 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 617 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 509 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17315 6b66334776e1e4a089ace5cc124c0ffd 670 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 519 539 8.4E-37 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 SUPERFAMILY SSF54862 1 202 9.0E-70 T 11-10-2018 AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.7E-83 T 11-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Gene3D G3DSA:3.30.70.20 1 198 1.2E-54 T 11-10-2018 AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.048 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_16695 ffaf6bc8ef5313bdc8bec0b7802f50d2 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 2.5E-30 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_07865 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL538_07865 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 105 4.7E-56 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily AL538_07865 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL538_07865 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.6E-59 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 AL538_07865 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL538_12005 720d6a4c3f126218c0beef9e9a89d7bc 143 SUPERFAMILY SSF54534 4 142 6.29E-37 T 11-10-2018 AL538_12005 720d6a4c3f126218c0beef9e9a89d7bc 143 Gene3D G3DSA:2.40.10.330 72 128 4.6E-43 T 11-10-2018 AL538_12005 720d6a4c3f126218c0beef9e9a89d7bc 143 Gene3D G3DSA:3.10.50.40 13 140 4.6E-43 T 11-10-2018 AL538_12005 720d6a4c3f126218c0beef9e9a89d7bc 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.9E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_05375 565d2044b7d5c9068dab8af547fe7415 283 SUPERFAMILY SSF56219 59 279 4.84E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_05375 565d2044b7d5c9068dab8af547fe7415 283 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 55.048 T 11-10-2018 IPR022958 Uncharacterised protein family UPF0294 AL538_05375 565d2044b7d5c9068dab8af547fe7415 283 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 1.3E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_05375 565d2044b7d5c9068dab8af547fe7415 283 Gene3D G3DSA:3.60.10.10 60 282 1.9E-19 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_00150 fe8648e86b94d256e39a84b9f42837e8 333 Gene3D G3DSA:2.60.40.2520 21 176 1.2E-7 T 11-10-2018 AL538_00150 fe8648e86b94d256e39a84b9f42837e8 333 Pfam PF07434 CblD like pilus biogenesis initiator 123 234 5.0E-14 T 11-10-2018 IPR010888 CblD-like pilus biogenesis initiator AL538_00150 fe8648e86b94d256e39a84b9f42837e8 333 Gene3D G3DSA:2.60.40.2040 177 333 3.4E-23 T 11-10-2018 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 Gene3D G3DSA:1.10.10.10 128 229 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-37 T 11-10-2018 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 Pfam PF00072 Response regulator receiver domain 4 112 4.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 SUPERFAMILY SSF46894 125 226 8.79E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 SMART SM00448 2 111 3.3E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 SUPERFAMILY SSF52172 1 124 2.99E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_08370 397fa07f5fde2ddb42a5faa641e914c2 229 SMART SM00862 147 225 1.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 Pfam PF12833 Helix-turn-helix domain 257 329 5.2E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 Gene3D G3DSA:1.10.10.60 228 331 7.8E-21 T 11-10-2018 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 8.7E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 8.7E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 SMART SM00342 246 328 8.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24485 1b21395ce85b3beefbb9c5aac12d471c 337 SUPERFAMILY SSF46689 286 331 1.3E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_08115 ee77f148ea0702e3a362852baed28d10 154 SUPERFAMILY SSF52540 28 152 2.85E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08115 ee77f148ea0702e3a362852baed28d10 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.7E-43 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL538_08115 ee77f148ea0702e3a362852baed28d10 154 Gene3D G3DSA:3.40.50.300 2 153 2.0E-49 T 11-10-2018 AL538_08115 ee77f148ea0702e3a362852baed28d10 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.1E-53 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 151 189 1.6E-5 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 285 323 170.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 233 274 0.16 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 23 62 300.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 192 230 0.38 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SMART SM00320 68 106 19.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 Pfam PF13360 PQQ-like domain 171 286 3.8E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 11-10-2018 IPR019775 WD40 repeat, conserved site AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 Gene3D G3DSA:2.130.10.10 106 328 4.4E-37 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 Gene3D G3DSA:2.130.10.10 18 105 1.2E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_07930 4c7ed92a0469a6c4a445d9c9769f619c 328 SUPERFAMILY SSF50998 26 328 7.85E-45 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL538_06615 d083548c6fdfdc0dcdf20327f2e94d97 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 34.707 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 AL538_06615 d083548c6fdfdc0dcdf20327f2e94d97 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 4.2E-19 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL538_06615 d083548c6fdfdc0dcdf20327f2e94d97 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 9.1E-20 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.2E-55 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 Gene3D G3DSA:3.40.50.720 3 332 1.6E-128 T 11-10-2018 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PIRSF PIRSF000149 1 342 4.4E-128 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 SUPERFAMILY SSF55347 159 321 8.93E-59 T 11-10-2018 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 3.1E-190 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 Gene3D G3DSA:3.30.360.10 158 322 1.6E-128 T 11-10-2018 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.923 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 2.6E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 2.6E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 2.6E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 2.6E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 2.6E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 3.9E-32 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 SUPERFAMILY SSF51735 2 183 3.27E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_06935 5ca8538b33312ab66048ee23fad3ebcb 345 SMART SM00846 2 159 6.8E-73 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_05305 6982f609abb43e8194d46eb3656de550 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 2.6E-40 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL538_05305 6982f609abb43e8194d46eb3656de550 346 Gene3D G3DSA:3.30.1330.10 7 171 9.7E-70 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_05305 6982f609abb43e8194d46eb3656de550 346 SUPERFAMILY SSF55326 8 171 7.33E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_05305 6982f609abb43e8194d46eb3656de550 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.784 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_05305 6982f609abb43e8194d46eb3656de550 346 SUPERFAMILY SSF56042 172 341 2.99E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_05305 6982f609abb43e8194d46eb3656de550 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 3.2E-151 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_05305 6982f609abb43e8194d46eb3656de550 346 Gene3D G3DSA:3.90.650.10 172 346 1.2E-73 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_05305 6982f609abb43e8194d46eb3656de550 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.7E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AL538_08265 787de4ac734c90db48c483de13aa07d3 606 SUPERFAMILY SSF46977 444 583 1.83E-43 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Gene3D G3DSA:4.10.80.40 543 577 2.0E-15 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Gene3D G3DSA:3.90.700.10 237 363 5.7E-162 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 4.2E-236 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 SUPERFAMILY SSF56425 227 358 2.39E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Pfam PF00890 FAD binding domain 7 397 8.8E-114 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 SUPERFAMILY SSF51905 3 428 5.34E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08265 787de4ac734c90db48c483de13aa07d3 606 PIRSF PIRSF000171 1 575 2.2E-45 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Gene3D G3DSA:1.20.58.100 424 538 3.4E-35 T 11-10-2018 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 11-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Gene3D G3DSA:3.50.50.60 7 409 5.7E-162 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08265 787de4ac734c90db48c483de13aa07d3 606 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 8.7E-38 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.3E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Gene3D G3DSA:2.30.130.40 1 116 2.1E-35 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Gene3D G3DSA:1.10.8.60 490 583 3.2E-33 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 SMART SM00464 10 201 1.6E-75 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Gene3D G3DSA:3.40.50.300 312 489 2.0E-60 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Gene3D G3DSA:1.20.58.1480 119 244 1.0E-43 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 SUPERFAMILY SSF52540 312 586 5.4E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.803 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 5.9E-99 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PIRSF PIRSF001174 1 774 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 SUPERFAMILY SSF54211 594 769 9.1E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 9.3E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 SMART SM00382 347 491 6.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 1.8E-56 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 1.8E-56 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.8E-56 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 1.8E-56 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 1.8E-56 T 11-10-2018 AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 SUPERFAMILY SSF88697 10 200 4.22E-48 T 11-10-2018 IPR015947 PUA-like superfamily AL538_14260 fe9e048d078845eddef26b0d99dd1ca9 783 Gene3D G3DSA:3.30.230.10 584 771 7.1E-85 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:3.30.70.380 708 801 9.5E-30 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SUPERFAMILY SSF55681 467 695 3.48E-49 T 11-10-2018 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SUPERFAMILY SSF50249 38 196 1.81E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SUPERFAMILY SSF56037 196 394 2.33E-77 T 11-10-2018 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Pfam PF03483 B3/4 domain 212 385 4.1E-71 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 11-10-2018 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 7.8E-29 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.771 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SMART SM00896 707 800 5.4E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:3.50.40.10 197 395 2.3E-83 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:3.30.56.10 7 179 2.8E-70 T 11-10-2018 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SMART SM00873 212 385 6.3E-100 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SUPERFAMILY SSF54991 703 800 3.66E-30 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.2E-276 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.3E-26 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 SMART SM00874 403 471 4.8E-29 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:2.40.50.140 39 154 2.8E-70 T 11-10-2018 AL538_02055 deb3b30003f6b373fd1c02fdaa29a171 801 Gene3D G3DSA:3.30.930.10 486 697 2.4E-60 T 11-10-2018 AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 SUPERFAMILY SSF51206 5 133 7.59E-16 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 SMART SM00116 229 276 2.4E-8 T 11-10-2018 IPR000644 CBS domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 SMART SM00116 165 212 0.0083 T 11-10-2018 IPR000644 CBS domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 SMART SM00100 18 138 0.0041 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Pfam PF00571 CBS domain 222 273 4.9E-10 T 11-10-2018 IPR000644 CBS domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Pfam PF00571 CBS domain 160 209 0.0014 T 11-10-2018 IPR000644 CBS domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 SUPERFAMILY SSF54631 155 273 6.7E-26 T 11-10-2018 AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 435 3.0E-42 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Gene3D G3DSA:3.10.580.10 153 286 4.1E-27 T 11-10-2018 AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Gene3D G3DSA:2.60.120.10 8 147 6.1E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Pfam PF00027 Cyclic nucleotide-binding domain 51 123 2.0E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_15510 10410e5ee5a782eeb464cc836b5418d5 620 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 617 2.2E-44 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 SUPERFAMILY SSF53850 89 292 2.48E-28 T 11-10-2018 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 Pfam PF03466 LysR substrate binding domain 89 291 3.5E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 Gene3D G3DSA:1.10.10.10 5 69 6.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 Gene3D G3DSA:3.40.190.10 163 268 4.7E-15 T 11-10-2018 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 SUPERFAMILY SSF46785 2 110 9.7E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20610 76a0e0a7e7fc1a802b6501302fd8f09a 300 Gene3D G3DSA:3.40.190.10 94 279 4.7E-15 T 11-10-2018 AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 Gene3D G3DSA:3.90.45.10 22 190 1.2E-66 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 25 180 2.3E-61 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 Hamap MF_00163 Peptide deformylase [def]. 23 183 31.003 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 Pfam PF01327 Polypeptide deformylase 25 173 1.1E-50 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 PIRSF PIRSF004749 7 193 1.6E-56 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 PRINTS PR01576 Peptide deformylase signature 110 121 3.5E-37 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 PRINTS PR01576 Peptide deformylase signature 141 170 3.5E-37 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 PRINTS PR01576 Peptide deformylase signature 54 83 3.5E-37 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 PRINTS PR01576 Peptide deformylase signature 122 140 3.5E-37 T 11-10-2018 IPR023635 Peptide deformylase AL538_09455 2e9a0be2ee3275e9e43f06a086624d78 193 SUPERFAMILY SSF56420 24 186 1.57E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily AL538_07240 30643ef437e3754b9d17e0efb1590ed8 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 4.2E-69 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL538_07240 30643ef437e3754b9d17e0efb1590ed8 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 2.6E-117 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AL538_26865 c8012263bd2375edc859a929f539b346 250 Pfam PF08220 DeoR-like helix-turn-helix domain 7 59 6.7E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_26865 c8012263bd2375edc859a929f539b346 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.1E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_26865 c8012263bd2375edc859a929f539b346 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.1E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_26865 c8012263bd2375edc859a929f539b346 250 SUPERFAMILY SSF100950 74 248 3.89E-19 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_26865 c8012263bd2375edc859a929f539b346 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_26865 c8012263bd2375edc859a929f539b346 250 Gene3D G3DSA:1.10.10.10 1 56 9.9E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26865 c8012263bd2375edc859a929f539b346 250 SMART SM00420 7 59 5.7E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_26865 c8012263bd2375edc859a929f539b346 250 SMART SM01134 73 250 1.5E-43 T 11-10-2018 AL538_26865 c8012263bd2375edc859a929f539b346 250 SUPERFAMILY SSF46785 4 77 5.2E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26865 c8012263bd2375edc859a929f539b346 250 Pfam PF00455 DeoR C terminal sensor domain 75 187 1.1E-27 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_26865 c8012263bd2375edc859a929f539b346 250 Gene3D G3DSA:3.30.750.70 70 135 2.3E-6 T 11-10-2018 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL538_10390 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AL538_07995 fed236e5c9fc2a6f80919d359cc21660 263 Gene3D G3DSA:3.10.180.50 3 239 5.8E-94 T 11-10-2018 AL538_07995 fed236e5c9fc2a6f80919d359cc21660 263 SMART SM01150 3 262 1.1E-117 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AL538_07995 fed236e5c9fc2a6f80919d359cc21660 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 1.9E-45 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Pfam PF01565 FAD binding domain 23 144 3.1E-16 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 SUPERFAMILY SSF56194 207 342 8.63E-46 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.279 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 SUPERFAMILY SSF56176 8 197 1.42E-40 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Gene3D G3DSA:3.30.43.10 1 72 1.8E-20 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 2.9E-90 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Gene3D G3DSA:3.30.465.10 73 222 4.5E-51 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Gene3D G3DSA:3.90.78.10 223 347 1.8E-41 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_08725 35cb1c2a57e17ade93d2cca0f174f3d6 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 2.4E-30 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:1.20.5.710 2 51 1.4E-22 T 11-10-2018 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.1E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.304 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF48300 4 58 4.19E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 SUPERFAMILY SSF54736 52 122 2.62E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 Gene3D G3DSA:3.30.1390.10 52 122 2.3E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 6.4E-16 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.6E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08660 85bc52b98e9b9f4fce1ea6cc458be630 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 723 740 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 1.4E-14 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 1.4E-14 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 1.4E-14 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 719 771 3.1E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF12838 4Fe-4S dicluster domain 634 703 2.7E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 4.8E-10 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 8.0E-32 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SMART SM00926 718 773 2.2E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:2.20.25.90 718 773 1.5E-18 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:1.10.1060.10 58 189 2.5E-25 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 174 2.3E-18 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:3.40.228.10 854 1055 1.5E-178 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF00384 Molybdopterin oxidoreductase 776 1202 8.4E-88 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1148 1165 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF46548 88 200 1.31E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:3.40.50.740 781 1243 1.5E-178 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:2.40.40.20 1275 1395 2.0E-40 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF53706 714 1250 4.06E-203 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Pfam PF01568 Molydopterin dinucleotide binding domain 1285 1389 1.3E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:3.30.70.20 614 707 4.5E-18 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 723 1393 7.5E-247 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:3.50.50.60 318 524 3.2E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 Gene3D G3DSA:3.50.50.60 190 312 2.6E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF50692 1253 1394 5.65E-40 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF54862 567 708 3.98E-20 T 11-10-2018 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF54292 1 98 4.65E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_26660 af18b8ec925f14bd0c5696670fb4501b 1412 SUPERFAMILY SSF51971 190 430 1.65E-61 T 11-10-2018 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 SMART SM00448 173 290 1.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 Pfam PF00072 Response regulator receiver domain 175 289 8.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 Pfam PF01584 CheW-like domain 14 149 4.6E-30 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 SUPERFAMILY SSF50341 11 152 4.71E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 Gene3D G3DSA:3.40.50.2300 162 299 1.0E-22 T 11-10-2018 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 SUPERFAMILY SSF52172 171 292 2.28E-21 T 11-10-2018 IPR011006 CheY-like superfamily AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 Gene3D G3DSA:2.40.50.180 31 146 1.4E-24 T 11-10-2018 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 PIRSF PIRSF002867 1 298 3.4E-89 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 SMART SM00260 11 147 1.0E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_26525 c153df5b0fd242c8a62538eedf74efb4 304 Gene3D G3DSA:2.30.30.40 17 141 1.4E-24 T 11-10-2018 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 2.8E-225 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Gene3D G3DSA:1.20.1270.20 153 235 2.9E-28 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Gene3D G3DSA:3.40.50.2030 237 382 6.9E-63 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 PIRSF PIRSF000076 1 553 5.6E-243 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Gene3D G3DSA:1.20.1270.20 1 143 2.0E-36 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 SUPERFAMILY SSF56821 1 551 3.79E-194 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 1.0E-162 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.223 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AL538_16065 77ce73de54c0efb2df824defa0365e78 553 Gene3D G3DSA:3.40.50.2030 383 551 7.2E-61 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AL538_25660 365bc4a352cb19c8cd555c991b30ebdd 93 PIRSF PIRSF028291 1 93 1.2E-28 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL538_25660 365bc4a352cb19c8cd555c991b30ebdd 93 Gene3D G3DSA:3.30.310.50 1 93 6.5E-25 T 11-10-2018 AL538_25660 365bc4a352cb19c8cd555c991b30ebdd 93 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 91 2.0E-25 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AL538_08640 582097d20aa45b804f6483826c17ea00 260 Pfam PF00293 NUDIX domain 137 238 1.2E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_08640 582097d20aa45b804f6483826c17ea00 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 259 41.964 T 11-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL538_08640 582097d20aa45b804f6483826c17ea00 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_08640 582097d20aa45b804f6483826c17ea00 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 4.5E-9 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AL538_08640 582097d20aa45b804f6483826c17ea00 260 Gene3D G3DSA:3.90.79.20 3 130 1.7E-33 T 11-10-2018 AL538_08640 582097d20aa45b804f6483826c17ea00 260 SUPERFAMILY SSF55811 62 248 1.23E-43 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_08640 582097d20aa45b804f6483826c17ea00 260 Gene3D G3DSA:3.90.79.10 131 259 1.9E-40 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SMART SM00487 600 790 3.0E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.40.50.11140 355 453 1.7E-30 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF52540 11 342 1.54E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.40.50.300 478 990 1.4E-236 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:2.30.30.840 483 541 1.4E-236 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SMART SM00982 1008 1108 9.1E-46 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SMART SM00490 826 910 2.0E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF52540 352 466 1.04E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.30.2060.10 130 215 3.8E-120 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.40.50.11180 26 334 3.8E-120 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 3.0E-26 T 11-10-2018 IPR003711 CarD-like/TRCF domain AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SMART SM01058 479 576 8.6E-53 T 11-10-2018 IPR003711 CarD-like/TRCF domain AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1108 27.873 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF143517 995 1147 9.15E-43 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.40.50.300 542 781 1.4E-236 T 11-10-2018 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Pfam PF03461 TRCF domain 1010 1101 1.9E-27 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 2.2E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF52540 523 783 5.41E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 3.0E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF141259 470 548 8.11E-25 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 SUPERFAMILY SSF52540 782 990 3.14E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14570 efb8b91c7a9b7847c71bce7b45055e4a 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 1.7E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AL538_12855 b30e006e90ea82f81170643281d76a72 217 PIRSF PIRSF000498 1 211 7.3E-80 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12855 b30e006e90ea82f81170643281d76a72 217 SUPERFAMILY SSF63380 93 197 4.76E-33 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_12855 b30e006e90ea82f81170643281d76a72 217 Gene3D G3DSA:2.40.30.20 1 89 3.7E-28 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_12855 b30e006e90ea82f81170643281d76a72 217 SUPERFAMILY SSF63380 1 89 7.65E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_12855 b30e006e90ea82f81170643281d76a72 217 Gene3D G3DSA:2.40.30.20 102 206 7.5E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_12855 b30e006e90ea82f81170643281d76a72 217 Pfam PF00677 Lumazine binding domain 3 87 3.1E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12855 b30e006e90ea82f81170643281d76a72 217 Pfam PF00677 Lumazine binding domain 100 184 3.0E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12855 b30e006e90ea82f81170643281d76a72 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.1E-66 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 SUPERFAMILY SSF56112 76 279 4.45E-51 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 Gene3D G3DSA:1.10.510.10 157 328 7.8E-28 T 11-10-2018 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 Pfam PF00069 Protein kinase domain 79 281 5.4E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 SMART SM00220 79 325 1.6E-27 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 Gene3D G3DSA:3.30.200.20 70 156 1.1E-19 T 11-10-2018 AL538_09945 71be9320e9017dec5c1c1e9099d0e581 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AL538_25265 a23a51a867e063b50745022a21b8e297 429 SUPERFAMILY SSF53649 10 427 7.85E-120 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_25265 a23a51a867e063b50745022a21b8e297 429 Gene3D G3DSA:1.10.60.40 304 390 6.3E-145 T 11-10-2018 AL538_25265 a23a51a867e063b50745022a21b8e297 429 PRINTS PR00113 Alkaline phosphatase signature 77 92 1.4E-39 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 PRINTS PR00113 Alkaline phosphatase signature 114 134 1.4E-39 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 PRINTS PR00113 Alkaline phosphatase signature 164 174 1.4E-39 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 PRINTS PR00113 Alkaline phosphatase signature 23 43 1.4E-39 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 PRINTS PR00113 Alkaline phosphatase signature 228 257 1.4E-39 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 ProSitePatterns PS00123 Alkaline phosphatase active site. 77 85 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 SMART SM00098 24 429 1.2E-115 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_25265 a23a51a867e063b50745022a21b8e297 429 Gene3D G3DSA:3.40.720.10 27 421 6.3E-145 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_25265 a23a51a867e063b50745022a21b8e297 429 Pfam PF00245 Alkaline phosphatase 24 427 1.3E-106 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_16425 71109563300a80e88522d58dcf5ef81e 244 Pfam PF02698 DUF218 domain 61 193 1.7E-21 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL538_14890 a40bfbd026cfa5cd7e48a1bd7fcae45f 288 Gene3D G3DSA:3.20.20.410 2 267 4.5E-44 T 11-10-2018 IPR036520 UPF0759 superfamily AL538_14890 a40bfbd026cfa5cd7e48a1bd7fcae45f 288 Pfam PF01904 Protein of unknown function DUF72 23 262 2.0E-55 T 11-10-2018 IPR002763 Protein of unknown function DUF72 AL538_14890 a40bfbd026cfa5cd7e48a1bd7fcae45f 288 SUPERFAMILY SSF117396 5 266 5.49E-74 T 11-10-2018 IPR036520 UPF0759 superfamily AL538_11490 b7f14d8c56a078b411bf6b3e018293fc 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 2.0E-24 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AL538_11490 b7f14d8c56a078b411bf6b3e018293fc 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.056 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AL538_11490 b7f14d8c56a078b411bf6b3e018293fc 268 SUPERFAMILY SSF56300 6 249 3.38E-57 T 11-10-2018 AL538_11490 b7f14d8c56a078b411bf6b3e018293fc 268 Gene3D G3DSA:3.60.21.10 2 266 5.5E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_11490 b7f14d8c56a078b411bf6b3e018293fc 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 2.8E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.977 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 SUPERFAMILY SSF88946 115 453 2.62E-95 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Gene3D G3DSA:1.10.601.10 113 455 6.3E-139 T 11-10-2018 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 11-10-2018 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF04546 Sigma-70, non-essential region 139 355 9.0E-67 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.0E-28 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_11370 2e09d4bd638f84fd02ff0b37f0d68a24 620 Gene3D G3DSA:1.10.10.10 536 620 1.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24300 bd0f4cd48b6cdadddd6c265620319f63 199 SUPERFAMILY SSF52200 40 167 9.02E-10 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AL538_24300 bd0f4cd48b6cdadddd6c265620319f63 199 Gene3D G3DSA:3.40.50.10140 4 152 6.2E-14 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily AL538_24300 bd0f4cd48b6cdadddd6c265620319f63 199 Pfam PF13676 TIR domain 46 137 5.5E-9 T 11-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.144 T 11-10-2018 IPR026593 Protein translocase subunit SecY AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 4.3E-134 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PIRSF PIRSF004557 10 442 1.0E-121 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 Pfam PF00344 SecY translocase 76 418 1.6E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 SUPERFAMILY SSF103491 15 425 1.29E-130 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 Gene3D G3DSA:1.10.3370.10 10 430 8.8E-160 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 11-10-2018 AL538_10925 29d2d6be6e1d1e31dba7dda7321af1eb 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 11-10-2018 AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 Gene3D G3DSA:3.30.1330.60 277 429 3.1E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 Pfam PF09850 Type VI secretion system protein DotU 50 252 1.8E-55 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 Gene3D G3DSA:1.25.40.590 47 204 2.6E-47 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 SUPERFAMILY SSF103088 311 426 1.96E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 1.9E-65 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 Pfam PF00691 OmpA family 322 420 5.4E-15 T 11-10-2018 IPR006665 OmpA-like domain AL538_24925 27231bd0bd3e0fbf8dcb8930d970b8f2 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 291 426 1.8E-44 T 11-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain AL538_03110 fce436df2f28086d1717755cc64a7aec 428 PIRSF PIRSF006066 1 427 3.8E-74 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_03110 fce436df2f28086d1717755cc64a7aec 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 8.1E-106 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_03110 fce436df2f28086d1717755cc64a7aec 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 7.0E-101 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.697 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 SUPERFAMILY SSF47060 3 89 9.12E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 Pfam PF00312 Ribosomal protein S15 8 88 2.9E-36 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 SMART SM01387 8 88 1.7E-52 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 5.5E-39 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 7.0E-30 T 11-10-2018 AL538_06160 e90692ad90de119edcce0c000e9ca4b8 89 Gene3D G3DSA:1.10.287.10 2 89 3.7E-35 T 11-10-2018 AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 Gene3D G3DSA:3.30.450.40 27 176 7.4E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 Gene3D G3DSA:3.30.70.270 177 334 4.0E-41 T 11-10-2018 AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 SMART SM00267 169 333 5.2E-30 T 11-10-2018 IPR000160 GGDEF domain AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 Pfam PF13185 GAF domain 26 168 2.4E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 SUPERFAMILY SSF55781 9 168 3.93E-26 T 11-10-2018 AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 SUPERFAMILY SSF55073 185 333 1.57E-34 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 333 2.4E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 SMART SM00065 25 177 2.6E-16 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_12435 9cebbdba45f96bd7090b4dac8e05d706 334 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 333 2.3E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 Gene3D G3DSA:1.10.10.60 171 282 9.3E-27 T 11-10-2018 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 Pfam PF12833 Helix-turn-helix domain 197 275 6.5E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 SMART SM00342 191 274 5.5E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 Gene3D G3DSA:2.60.120.280 31 122 2.1E-9 T 11-10-2018 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 Pfam PF02311 AraC-like ligand binding domain 34 108 3.0E-5 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 SUPERFAMILY SSF46689 176 225 4.21E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 SUPERFAMILY SSF46689 227 277 8.51E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_24420 1b762ec364fd5f9ad32463fcebd994d1 285 SUPERFAMILY SSF51215 28 161 1.44E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_08605 cd211821e1cdabca16c63ddd49b38847 377 Pfam PF00571 CBS domain 261 313 2.7E-5 T 11-10-2018 IPR000644 CBS domain AL538_08605 cd211821e1cdabca16c63ddd49b38847 377 SUPERFAMILY SSF54631 181 315 9.39E-27 T 11-10-2018 AL538_08605 cd211821e1cdabca16c63ddd49b38847 377 Gene3D G3DSA:3.10.580.10 186 315 3.5E-42 T 11-10-2018 AL538_08605 cd211821e1cdabca16c63ddd49b38847 377 Pfam PF01595 Domain of unknown function DUF21 9 177 1.9E-29 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL538_04185 216f1d7080f74055ffaaa941f6df1572 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 2.0E-70 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AL538_04185 216f1d7080f74055ffaaa941f6df1572 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 3.6E-76 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 AL538_15875 bc95048e6e4647c7dbbeef24b5ad7351 275 Pfam PF13460 NAD(P)H-binding 9 184 2.9E-17 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_15875 bc95048e6e4647c7dbbeef24b5ad7351 275 SUPERFAMILY SSF51735 2 268 4.18E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15875 bc95048e6e4647c7dbbeef24b5ad7351 275 Gene3D G3DSA:3.40.50.720 1 275 4.2E-47 T 11-10-2018 AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 Gene3D G3DSA:2.30.40.10 3 428 1.9E-170 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 SUPERFAMILY SSF51338 3 469 1.22E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 Gene3D G3DSA:3.30.1490.130 284 340 1.9E-170 T 11-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 Gene3D G3DSA:3.20.20.140 56 415 1.9E-170 T 11-10-2018 AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 SUPERFAMILY SSF51556 57 415 4.93E-86 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_26635 4395ec400ca4b86b20a68a1470e6131e 481 Pfam PF07969 Amidohydrolase family 45 459 4.4E-43 T 11-10-2018 IPR013108 Amidohydrolase 3 AL538_13090 1999716d8dbecc44205e8d0dbbbdf1ce 185 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.7 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL538_13090 1999716d8dbecc44205e8d0dbbbdf1ce 185 Gene3D G3DSA:3.30.160.150 19 167 1.1E-49 T 11-10-2018 AL538_13090 1999716d8dbecc44205e8d0dbbbdf1ce 185 Pfam PF04390 Lipopolysaccharide-assembly 45 159 1.2E-12 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AL538_18095 2989b771e912da2512ae9c95e419c769 254 Pfam PF00970 Oxidoreductase FAD-binding domain 21 95 4.7E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL538_18095 2989b771e912da2512ae9c95e419c769 254 Gene3D G3DSA:2.40.30.10 2 102 3.2E-23 T 11-10-2018 AL538_18095 2989b771e912da2512ae9c95e419c769 254 SUPERFAMILY SSF63380 10 100 6.99E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_18095 2989b771e912da2512ae9c95e419c769 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 229 3.3E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_18095 2989b771e912da2512ae9c95e419c769 254 Gene3D G3DSA:3.40.50.80 104 254 7.5E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_18095 2989b771e912da2512ae9c95e419c769 254 SUPERFAMILY SSF52343 111 253 2.1E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 Gene3D G3DSA:3.40.440.10 6 249 2.7E-107 T 11-10-2018 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 Gene3D G3DSA:3.90.170.10 267 438 3.6E-67 T 11-10-2018 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 SUPERFAMILY SSF52540 3 436 8.07E-180 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 219.907 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 3.5E-179 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 Gene3D G3DSA:1.10.300.10 102 201 2.7E-107 T 11-10-2018 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 SMART SM00788 4 431 0.0 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.8E-191 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08070 4b9255c1163f178c6d821b51e9a3498d 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_08100 1179e6410e960c668db15bb359a17184 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.022 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL538_08100 1179e6410e960c668db15bb359a17184 310 SUPERFAMILY SSF52540 10 153 1.1E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08100 1179e6410e960c668db15bb359a17184 310 Gene3D G3DSA:3.40.50.300 12 292 2.7E-107 T 11-10-2018 AL538_08100 1179e6410e960c668db15bb359a17184 310 Gene3D G3DSA:1.10.20.140 115 186 2.7E-107 T 11-10-2018 AL538_08100 1179e6410e960c668db15bb359a17184 310 Pfam PF01715 IPP transferase 42 287 1.1E-85 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL538_08100 1179e6410e960c668db15bb359a17184 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 4.6E-116 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 Gene3D G3DSA:1.10.287.80 6 284 1.3E-110 T 11-10-2018 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 Pfam PF00231 ATP synthase 5 287 1.4E-98 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.856 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 SUPERFAMILY SSF52943 2 288 1.96E-96 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.1E-112 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.1E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.1E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.1E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.1E-36 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09595 c176c935c45ee3371cb940fc3afbf87a 288 Gene3D G3DSA:3.40.1380.10 61 207 1.3E-110 T 11-10-2018 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 2.5E-37 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Gene3D G3DSA:3.40.120.10 263 370 5.9E-60 T 11-10-2018 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 SUPERFAMILY SSF53738 2 187 6.48E-40 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 1.1E-25 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.7E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Gene3D G3DSA:3.40.120.10 171 365 5.9E-60 T 11-10-2018 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 418 466 9.4E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 SUPERFAMILY SSF53738 250 379 2.59E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Gene3D G3DSA:3.30.310.50 377 469 3.0E-16 T 11-10-2018 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 Gene3D G3DSA:3.40.120.10 1 170 3.5E-47 T 11-10-2018 AL538_06345 2dac6455d214f81528cafc598dc1d6f9 470 SUPERFAMILY SSF55957 374 466 3.92E-18 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 PIRSF PIRSF015626 1 271 8.6E-98 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 SUPERFAMILY SSF53927 15 266 1.71E-70 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 Gene3D G3DSA:3.40.140.10 122 272 2.0E-42 T 11-10-2018 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 Pfam PF02634 FdhD/NarQ family 35 266 3.6E-73 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 Gene3D G3DSA:3.10.20.10 36 119 8.7E-10 T 11-10-2018 AL538_00630 e2eb90ae19b4f28cd41719b2a99423db 274 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.028 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SMART SM00957 6 403 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SMART SM00958 228 359 1.6E-81 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SUPERFAMILY SSF52540 5 416 3.8E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Gene3D G3DSA:1.10.3060.10 621 833 3.0E-76 T 11-10-2018 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.0E-66 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SUPERFAMILY SSF81886 620 897 1.09E-83 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SUPERFAMILY SSF81767 227 369 1.96E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.037 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Pfam PF02810 SEC-C motif 889 907 3.3E-10 T 11-10-2018 IPR004027 SEC-C motif AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 SUPERFAMILY SSF52540 418 610 4.56E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Gene3D G3DSA:3.40.50.300 22 416 2.8E-176 T 11-10-2018 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Pfam PF07517 SecA DEAD-like domain 7 403 3.3E-133 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Gene3D G3DSA:3.40.50.300 418 620 2.4E-87 T 11-10-2018 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Gene3D G3DSA:3.90.1440.10 229 369 2.8E-176 T 11-10-2018 AL538_11670 ac3909c98f19cffa2f8dae7968a3151a 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 2.6E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AL538_13880 cb64d6e56cdf5514790cc160ba3e2576 270 PIRSF PIRSF003092 1 270 8.8E-93 T 11-10-2018 IPR025501 ATP binding protein MinD AL538_13880 cb64d6e56cdf5514790cc160ba3e2576 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 9.0E-19 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_13880 cb64d6e56cdf5514790cc160ba3e2576 270 SUPERFAMILY SSF52540 1 268 5.83E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13880 cb64d6e56cdf5514790cc160ba3e2576 270 Gene3D G3DSA:3.40.50.300 1 260 1.8E-71 T 11-10-2018 AL538_13880 cb64d6e56cdf5514790cc160ba3e2576 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 9.7E-109 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AL538_26880 b060701989a12275bbe9846ca6dc30d7 293 SUPERFAMILY SSF161098 55 281 6.02E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL538_26880 b060701989a12275bbe9846ca6dc30d7 293 Gene3D G3DSA:1.10.3720.10 51 292 4.3E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL538_26880 b060701989a12275bbe9846ca6dc30d7 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 292 2.5E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_06005 360cc4fcd30d85fea374abdd313ca705 180 Pfam PF01478 Type IV leader peptidase family 8 108 4.5E-12 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL538_06005 360cc4fcd30d85fea374abdd313ca705 180 Gene3D G3DSA:1.20.120.1220 5 123 3.7E-7 T 11-10-2018 AL538_26470 51a2289005b8c06de7846567dc90fd10 364 Pfam PF03773 Predicted permease 10 361 1.6E-61 T 11-10-2018 IPR005524 Predicted permease DUF318 AL538_26470 51a2289005b8c06de7846567dc90fd10 364 SUPERFAMILY SSF103473 83 361 2.35E-6 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_04960 2787bafc5cf1dbacfc2a737e0d75e75f 161 Gene3D G3DSA:2.40.50.140 30 142 1.8E-39 T 11-10-2018 AL538_04960 2787bafc5cf1dbacfc2a737e0d75e75f 161 SUPERFAMILY SSF82093 30 142 1.14E-37 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AL538_04960 2787bafc5cf1dbacfc2a737e0d75e75f 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.183 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AL538_04960 2787bafc5cf1dbacfc2a737e0d75e75f 161 Pfam PF03100 CcmE 4 136 4.0E-44 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 SUPERFAMILY SSF52540 4 286 5.93E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 Gene3D G3DSA:3.40.50.300 1 289 6.0E-111 T 11-10-2018 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 AL538_07985 8d2cc75c8c614e774f6b9f755a9835ea 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.4E-70 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 Gene3D G3DSA:3.40.50.150 10 315 2.8E-101 T 11-10-2018 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.877 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 PIRSF PIRSF004486 1 316 3.7E-101 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 SUPERFAMILY SSF81799 113 216 6.41E-31 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 9.1E-119 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 Pfam PF01795 MraW methylase family 5 315 1.1E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 SUPERFAMILY SSF53335 7 316 7.7E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_11600 4a789f0c10a278a5934f8536ccb0e18c 316 Gene3D G3DSA:1.10.150.170 112 218 2.8E-101 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AL538_26140 67721135fa7386872b47850f80df16a5 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 8.1E-154 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_26140 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_26140 67721135fa7386872b47850f80df16a5 316 SUPERFAMILY SSF51569 1 315 1.47E-113 T 11-10-2018 AL538_26140 67721135fa7386872b47850f80df16a5 316 Gene3D G3DSA:3.20.20.70 2 316 5.3E-138 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_26140 67721135fa7386872b47850f80df16a5 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_26140 67721135fa7386872b47850f80df16a5 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.1E-100 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_26140 67721135fa7386872b47850f80df16a5 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.85 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Pfam PF00158 Sigma-54 interaction domain 195 361 4.3E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Pfam PF02954 Bacterial regulatory protein, Fis family 470 500 3.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_16070 396ec32b9bb09022be45869f27257d76 509 SUPERFAMILY SSF55781 8 163 1.59E-17 T 11-10-2018 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Gene3D G3DSA:3.30.450.40 7 175 2.3E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_16070 396ec32b9bb09022be45869f27257d76 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_16070 396ec32b9bb09022be45869f27257d76 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_16070 396ec32b9bb09022be45869f27257d76 509 SUPERFAMILY SSF46689 458 507 3.4E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Gene3D G3DSA:1.10.8.60 365 430 2.7E-15 T 11-10-2018 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Gene3D G3DSA:1.10.10.60 454 509 2.6E-9 T 11-10-2018 AL538_16070 396ec32b9bb09022be45869f27257d76 509 Gene3D G3DSA:3.40.50.300 180 364 4.0E-63 T 11-10-2018 AL538_16070 396ec32b9bb09022be45869f27257d76 509 SMART SM00065 21 170 3.5E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_16070 396ec32b9bb09022be45869f27257d76 509 SMART SM00382 214 358 4.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16070 396ec32b9bb09022be45869f27257d76 509 SUPERFAMILY SSF52540 193 426 5.47E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18340 eb3287625bae404f90a19d76a634315c 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 Gene3D G3DSA:3.40.50.300 12 165 1.6E-6 T 11-10-2018 AL538_18340 eb3287625bae404f90a19d76a634315c 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18340 eb3287625bae404f90a19d76a634315c 902 SMART SM00421 836 893 5.8E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_18340 eb3287625bae404f90a19d76a634315c 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.928 T 11-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT AL538_18340 eb3287625bae404f90a19d76a634315c 902 SUPERFAMILY SSF52540 14 228 2.75E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18340 eb3287625bae404f90a19d76a634315c 902 Gene3D G3DSA:1.25.40.10 445 811 9.7E-83 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_18340 eb3287625bae404f90a19d76a634315c 902 SUPERFAMILY SSF48452 442 805 1.22E-156 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 1.1E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.979 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 Gene3D G3DSA:3.30.930.10 1 203 1.7E-64 T 11-10-2018 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-24 T 11-10-2018 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 1.7E-70 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 PIRSF PIRSF016262 1 216 2.1E-62 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13045 8c3414c6bc368dc56025c5c50251df00 220 SUPERFAMILY SSF55681 2 204 2.4E-71 T 11-10-2018 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 Gene3D G3DSA:3.90.1150.10 21 404 2.3E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 6.2E-174 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 PIRSF PIRSF000412 4 431 9.6E-167 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 52.936 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 SUPERFAMILY SSF53383 9 430 1.53E-180 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_23870 c9c2b02a7b9931f6579333c7d2b1bf4d 431 Gene3D G3DSA:3.40.640.10 47 298 2.3E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_18080 7dd28ea1c6aac6fa08c18873c1493d5a 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 217 8.2E-52 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL538_18080 7dd28ea1c6aac6fa08c18873c1493d5a 223 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 29.059 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 SMART SM00963 1 86 5.3E-37 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 SMART SM00962 100 296 7.1E-115 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Gene3D G3DSA:3.40.50.300 90 285 4.0E-123 T 11-10-2018 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Gene3D G3DSA:1.20.120.140 4 305 4.0E-123 T 11-10-2018 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 SUPERFAMILY SSF52540 42 353 1.43E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 SMART SM00382 99 247 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 6.8E-179 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.242 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Gene3D G3DSA:1.10.260.30 328 453 9.6E-45 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AL538_06560 23d289c03ff1342b0e9c30cb8b0dcce2 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_05640 264eb4a394ac807de853a85b9e332d91 334 Pfam PF02424 ApbE family 31 310 1.3E-86 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL538_05640 264eb4a394ac807de853a85b9e332d91 334 SUPERFAMILY SSF143631 24 332 6.02E-102 T 11-10-2018 IPR003374 ApbE-like superfamily AL538_05640 264eb4a394ac807de853a85b9e332d91 334 PIRSF PIRSF006268 1 334 3.3E-94 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL538_05640 264eb4a394ac807de853a85b9e332d91 334 Gene3D G3DSA:3.10.520.20 16 334 9.7E-114 T 11-10-2018 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.339 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 Gene3D G3DSA:1.10.240.10 218 324 1.9E-34 T 11-10-2018 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 5.8E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 2.1E-126 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 Gene3D G3DSA:3.10.290.10 325 394 1.9E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 SUPERFAMILY SSF55174 297 394 6.22E-16 T 11-10-2018 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 SUPERFAMILY SSF52374 6 316 7.59E-98 T 11-10-2018 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 Gene3D G3DSA:3.40.50.620 5 217 6.3E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_06250 43323f4f3ff4a133b8cc4ed0c8300445 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 Gene3D G3DSA:2.40.50.140 245 285 5.2E-8 T 11-10-2018 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 Gene3D G3DSA:2.40.50.100 286 348 5.2E-8 T 11-10-2018 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 SUPERFAMILY SSF52540 9 247 9.01E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 SMART SM00382 34 217 8.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 SUPERFAMILY SSF50331 242 361 4.89E-18 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 359 2.4E-117 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 Pfam PF00005 ABC transporter 26 167 1.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 Pfam PF08402 TOBE domain 283 361 1.7E-16 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_01780 7e0574b8b32e3de55af224d74995e95c 379 Gene3D G3DSA:3.40.50.300 1 244 2.9E-77 T 11-10-2018 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 4.2E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 Gene3D G3DSA:3.40.50.1000 5 218 6.1E-64 T 11-10-2018 IPR023214 HAD superfamily AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 195 2.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 Gene3D G3DSA:1.10.150.240 16 95 6.1E-64 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 9.6E-23 T 11-10-2018 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 7.4E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 7.4E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.4E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 7.4E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 SUPERFAMILY SSF56784 2 222 8.27E-49 T 11-10-2018 IPR036412 HAD-like superfamily AL538_20815 546fe1c91b29b8e2e98e1ea36613673e 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 5.5E-87 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AL538_04460 0329328cb53d67ab1d416b6e6fa0f9c4 1389 Gene3D G3DSA:2.130.10.30 960 1112 6.5E-19 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AL538_04460 0329328cb53d67ab1d416b6e6fa0f9c4 1389 Gene3D G3DSA:2.130.10.30 1214 1386 7.9E-28 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AL538_04460 0329328cb53d67ab1d416b6e6fa0f9c4 1389 SUPERFAMILY SSF50985 958 1211 5.1E-25 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AL538_04460 0329328cb53d67ab1d416b6e6fa0f9c4 1389 SUPERFAMILY SSF50985 1140 1370 8.11E-34 T 11-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 SUPERFAMILY SSF50447 205 301 1.04E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Gene3D G3DSA:2.40.30.10 206 334 6.5E-52 T 11-10-2018 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.449 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.8E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 1.6E-230 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Gene3D G3DSA:3.40.50.300 1 203 3.3E-69 T 11-10-2018 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Gene3D G3DSA:2.40.30.10 338 393 4.9E-29 T 11-10-2018 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 SUPERFAMILY SSF52540 6 219 4.98E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08690 765e0106b4f6f9d621160e0098d7d9d6 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 7.1E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Gene3D G3DSA:3.30.450.20 59 177 9.6E-60 T 11-10-2018 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 SUPERFAMILY SSF55874 446 582 4.02E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Pfam PF02743 Cache domain 40 223 2.4E-15 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 SUPERFAMILY SSF103190 57 185 8.63E-19 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 PIRSF PIRSF036431 3 625 1.3E-185 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 616 2.7E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Gene3D G3DSA:1.10.287.130 352 439 1.2E-15 T 11-10-2018 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 6.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 6.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 6.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Gene3D G3DSA:3.30.565.10 447 620 1.7E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 SMART SM00388 376 444 0.0017 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 SUPERFAMILY SSF47384 362 443 1.28E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 SMART SM00387 488 618 1.9E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Gene3D G3DSA:3.30.450.20 47 243 9.6E-60 T 11-10-2018 AL538_19550 239ee9047178ebb866a9a95fbede1b7a 628 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 440 1.1E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SMART SM00482 687 894 9.9E-116 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SUPERFAMILY SSF53098 334 519 1.26E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:1.20.1060.10 544 659 1.1E-43 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:1.10.150.20 174 253 1.4E-94 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.0E-77 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:3.30.70.370 665 926 1.2E-113 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SMART SM00474 331 518 1.4E-41 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:1.10.150.20 710 853 1.2E-113 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:3.30.420.10 328 543 1.6E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Pfam PF01612 3'-5' exonuclease 331 515 1.2E-38 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Pfam PF00476 DNA polymerase family A 552 927 2.6E-157 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SUPERFAMILY SSF56672 523 930 3.67E-160 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SUPERFAMILY SSF47807 171 291 1.15E-29 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SUPERFAMILY SSF88723 7 170 1.18E-58 T 11-10-2018 IPR029060 PIN-like domain superfamily AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 4.4E-285 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SMART SM00279 173 208 1.2E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 268 2.5E-28 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Gene3D G3DSA:3.40.50.1010 9 284 1.4E-94 T 11-10-2018 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 SMART SM00475 7 267 1.3E-122 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL538_10135 74190006a51f2a70ce75eaeb6a6373a4 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.9E-54 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 SUPERFAMILY SSF46785 13 123 1.14E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.528 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Pfam PF17193 MukF C-terminal domain 288 445 1.2E-77 T 11-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 SUPERFAMILY SSF140570 124 286 6.93E-76 T 11-10-2018 IPR036141 MukF, middle domain superfamily AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Gene3D G3DSA:1.20.58.590 124 316 1.8E-80 T 11-10-2018 IPR036141 MukF, middle domain superfamily AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Pfam PF03882 MukF winged-helix domain 10 122 4.0E-53 T 11-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Gene3D G3DSA:1.10.10.10 29 123 3.6E-45 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 PIRSF PIRSF018282 1 445 1.1E-247 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Pfam PF17192 MukF middle domain 126 286 2.2E-78 T 11-10-2018 IPR033440 Chromosome partition protein MukF, middle domain AL538_14850 6ed27480c74f6ce46d3c3023eb12a132 445 Gene3D G3DSA:1.10.225.40 358 445 1.9E-37 T 11-10-2018 IPR038198 MukF, C-terminal domain superfamily AL538_25900 d9d118a6a30d795522b630ea252bccba 199 Gene3D G3DSA:1.10.357.10 5 197 1.2E-45 T 11-10-2018 AL538_25900 d9d118a6a30d795522b630ea252bccba 199 SUPERFAMILY SSF46689 4 78 1.39E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25900 d9d118a6a30d795522b630ea252bccba 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.8E-31 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal AL538_25900 d9d118a6a30d795522b630ea252bccba 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_25900 d9d118a6a30d795522b630ea252bccba 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 96.827 T 11-10-2018 IPR017757 Transcriptional repressor BetI AL538_25900 d9d118a6a30d795522b630ea252bccba 199 SUPERFAMILY SSF48498 105 193 1.69E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_25900 d9d118a6a30d795522b630ea252bccba 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_25900 d9d118a6a30d795522b630ea252bccba 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 2.8E-75 T 11-10-2018 IPR017757 Transcriptional repressor BetI AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 SUPERFAMILY SSF111369 38 108 1.7E-7 T 11-10-2018 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 Gene3D G3DSA:1.10.287.470 73 167 8.8E-10 T 11-10-2018 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 SUPERFAMILY SSF111369 182 279 3.53E-9 T 11-10-2018 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 Gene3D G3DSA:2.40.50.100 39 168 8.8E-10 T 11-10-2018 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 Pfam PF00529 HlyD membrane-fusion protein of T1SS 283 332 5.6E-10 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 Gene3D G3DSA:2.40.30.170 220 336 1.0E-36 T 11-10-2018 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 282 1.2E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 4.4E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_20050 5b141c3d02d1ae0ca829c85297b674d0 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 70 4.4E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_10875 98717f215155676eca4114be3006e924 123 Gene3D G3DSA:2.40.150.20 1 123 3.9E-56 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10875 98717f215155676eca4114be3006e924 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.5E-58 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AL538_10875 98717f215155676eca4114be3006e924 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.363 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL538_10875 98717f215155676eca4114be3006e924 123 SMART SM01374 1 123 1.3E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL538_10875 98717f215155676eca4114be3006e924 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.1E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AL538_10875 98717f215155676eca4114be3006e924 123 SUPERFAMILY SSF50193 2 122 4.19E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10875 98717f215155676eca4114be3006e924 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 SUPERFAMILY SSF49785 438 592 2.98E-26 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 SUPERFAMILY SSF52743 23 432 4.19E-58 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 Pfam PF01483 Proprotein convertase P-domain 475 556 3.5E-21 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 Gene3D G3DSA:2.60.120.260 438 592 4.8E-51 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 Pfam PF00082 Subtilase family 65 388 1.3E-31 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 Gene3D G3DSA:3.40.50.200 19 434 2.3E-99 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 2.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 2.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_25255 4e56d9b16c7c5d5162a9e704cecb7cbb 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 2.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.553 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 SMART SM01232 129 221 5.6E-46 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Gene3D G3DSA:3.20.190.10 2 128 5.9E-42 T 11-10-2018 IPR035937 MutM-like, N-terminal AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 SUPERFAMILY SSF46946 130 221 1.7E-30 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.3E-27 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.1E-95 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.4E-31 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 SUPERFAMILY SSF57716 217 268 3.14E-16 T 11-10-2018 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Gene3D G3DSA:1.10.8.50 131 269 3.1E-47 T 11-10-2018 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 SUPERFAMILY SSF81624 2 138 5.36E-42 T 11-10-2018 IPR035937 MutM-like, N-terminal AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 5.8E-9 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AL538_10545 2f39de74c1b648fb4ebc432c1de2ce48 269 SMART SM00898 2 115 6.4E-55 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 381 4.8E-55 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 SUPERFAMILY SSF52777 166 380 1.73E-55 T 11-10-2018 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 SUPERFAMILY SSF51230 3 92 1.14E-23 T 11-10-2018 IPR011053 Single hybrid motif AL538_25340 346db5b4b007f70f9fe09ce738494773 382 SUPERFAMILY SSF47005 123 165 2.49E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Pfam PF02817 e3 binding domain 130 162 8.5E-10 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Gene3D G3DSA:2.40.50.100 4 82 4.4E-21 T 11-10-2018 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Pfam PF00364 Biotin-requiring enzyme 5 77 1.7E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_25340 346db5b4b007f70f9fe09ce738494773 382 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Gene3D G3DSA:3.30.559.10 177 382 1.2E-49 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL538_25340 346db5b4b007f70f9fe09ce738494773 382 Gene3D G3DSA:4.10.320.10 127 166 6.5E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.0E-24 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 SUPERFAMILY SSF53706 40 660 4.32E-165 T 11-10-2018 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 11-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Gene3D G3DSA:3.40.228.10 179 641 1.9E-241 T 11-10-2018 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 SUPERFAMILY SSF50692 669 817 9.95E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Gene3D G3DSA:2.40.40.20 649 813 8.5E-48 T 11-10-2018 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Gene3D G3DSA:3.40.50.740 87 569 1.9E-241 T 11-10-2018 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 2.8E-76 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_15915 c1ba7e42eda708194b2bf99b53629620 820 Gene3D G3DSA:3.90.55.10 82 615 1.9E-241 T 11-10-2018 AL538_26085 6f702006ca5d4178a8def0ecf8a22184 321 Pfam PF03595 Voltage-dependent anion channel 12 304 1.5E-26 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL538_26085 6f702006ca5d4178a8def0ecf8a22184 321 Gene3D G3DSA:1.50.10.150 6 310 3.6E-31 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AL538_14275 18643b1383d157dccf8fed18e02f096d 99 SUPERFAMILY SSF47781 25 99 2.22E-27 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_14275 18643b1383d157dccf8fed18e02f096d 99 Pfam PF12836 Helix-hairpin-helix motif 37 97 1.4E-22 T 11-10-2018 AL538_14275 18643b1383d157dccf8fed18e02f096d 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 99 4.8E-25 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AL538_14275 18643b1383d157dccf8fed18e02f096d 99 Gene3D G3DSA:1.10.150.280 25 99 6.5E-23 T 11-10-2018 AL538_14275 18643b1383d157dccf8fed18e02f096d 99 SMART SM00278 77 96 80.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_14275 18643b1383d157dccf8fed18e02f096d 99 SMART SM00278 47 66 21.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_25010 9ac91c99bddcc5c78f94011964e28f70 325 SUPERFAMILY SSF56281 1 306 2.57E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_25010 9ac91c99bddcc5c78f94011964e28f70 325 Pfam PF12706 Beta-lactamase superfamily domain 32 151 2.5E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_25010 9ac91c99bddcc5c78f94011964e28f70 325 Hamap MF_01818 Ribonuclease BN [rbn]. 1 308 32.76 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 AL538_25010 9ac91c99bddcc5c78f94011964e28f70 325 Gene3D G3DSA:3.60.15.10 1 308 1.9E-83 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_25010 9ac91c99bddcc5c78f94011964e28f70 325 SMART SM00849 19 247 4.4E-4 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 SMART SM00870 5 324 1.6E-142 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 Gene3D G3DSA:3.40.50.1170 1 209 9.7E-94 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 Pfam PF00710 Asparaginase, N-terminal 5 192 9.5E-68 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 SUPERFAMILY SSF53774 3 336 8.11E-114 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.8E-116 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 Gene3D G3DSA:3.40.50.40 210 337 2.5E-44 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 PIRSF PIRSF500176 2 333 1.4E-109 T 11-10-2018 AL538_04640 bdc042bb6de2ec8fb5ac83452ec2acb0 337 PIRSF PIRSF001220 1 335 4.9E-95 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 SUPERFAMILY SSF53474 13 260 9.18E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 2.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 2.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 2.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 Gene3D G3DSA:3.40.50.1820 7 264 1.5E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14805 ec8d2ce3ea813b9b9345693a6a5b0611 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 4.5E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_19735 9788b5795a9c57bcacbed2c170f925a2 363 SUPERFAMILY SSF55909 3 362 3.57E-138 T 11-10-2018 AL538_19735 9788b5795a9c57bcacbed2c170f925a2 363 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 15 361 2.5E-117 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL538_19735 9788b5795a9c57bcacbed2c170f925a2 363 Gene3D G3DSA:3.75.10.10 1 363 9.7E-138 T 11-10-2018 AL538_19735 9788b5795a9c57bcacbed2c170f925a2 363 Hamap MF_01841 Agmatine deiminase [aguA]. 7 362 60.435 T 11-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL538_19735 9788b5795a9c57bcacbed2c170f925a2 363 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 7 362 2.9E-176 T 11-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PIRSF PIRSF000729 9 378 4.5E-137 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 Pfam PF00696 Amino acid kinase family 15 243 2.1E-41 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.835 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 SUPERFAMILY SSF53633 15 265 3.53E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 Pfam PF01472 PUA domain 286 360 2.8E-23 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 SMART SM00359 286 369 3.0E-19 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 Gene3D G3DSA:3.40.1160.10 5 274 1.2E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 Gene3D G3DSA:2.30.130.10 275 377 8.3E-32 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 1.4E-147 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12835 358b1accae1cf2d06c8c2683bbee536c 379 SUPERFAMILY SSF88697 286 376 5.19E-25 T 11-10-2018 IPR015947 PUA-like superfamily AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 SUPERFAMILY SSF52540 4 236 1.16E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 SMART SM00382 28 220 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 Pfam PF00005 ABC transporter 19 174 8.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 2.5E-126 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL538_17270 7eca3dc496fa458f75c2194c90e1ae54 249 Gene3D G3DSA:3.40.50.300 4 246 2.6E-62 T 11-10-2018 AL538_01960 a7fca2797d9f52664e6dd1938e7b782e 203 Gene3D G3DSA:2.30.110.10 1 203 1.7E-61 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_01960 a7fca2797d9f52664e6dd1938e7b782e 203 SUPERFAMILY SSF50475 2 198 9.81E-36 T 11-10-2018 AL538_01960 a7fca2797d9f52664e6dd1938e7b782e 203 SMART SM00903 19 164 1.9E-7 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL538_01960 a7fca2797d9f52664e6dd1938e7b782e 203 Pfam PF01613 Flavin reductase like domain 22 163 1.1E-16 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 SUPERFAMILY SSF51735 1 252 1.75E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 4.7E-4 T 11-10-2018 AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 Gene3D G3DSA:3.40.50.720 1 252 1.7E-71 T 11-10-2018 AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.3E-55 T 11-10-2018 AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_23695 e496d6e40fe6f1b23f3db672cd9eea4d 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 SUPERFAMILY SSF56601 2 271 2.63E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 Gene3D G3DSA:2.60.410.10 271 361 4.9E-27 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 Gene3D G3DSA:3.40.710.10 10 269 4.7E-90 T 11-10-2018 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 SMART SM00936 271 361 1.7E-28 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 54 65 3.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 3.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 3.1E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 271 361 9.1E-21 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 SUPERFAMILY SSF69189 271 363 2.16E-23 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_18135 2b7221fd60d96e7af84ccd71d3e9d1d8 381 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 20 250 1.1E-85 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 1.0E-7 T 11-10-2018 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 1.0E-7 T 11-10-2018 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 1.0E-7 T 11-10-2018 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 Pfam PF00691 OmpA family 118 212 2.5E-23 T 11-10-2018 IPR006665 OmpA-like domain AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 Pfam PF13488 Glycine zipper 38 86 4.8E-11 T 11-10-2018 IPR039567 Glycine zipper domain AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 Gene3D G3DSA:3.30.1330.60 80 222 7.8E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01021 OMPA domain signature 163 179 9.7E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01021 OMPA domain signature 118 140 9.7E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 PRINTS PR01021 OMPA domain signature 148 163 9.7E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_02195 3f4caa3128b9ad671a1758a0db8904dd 222 SUPERFAMILY SSF103088 106 221 6.93E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_24015 35212519d2c73185ea47a8d5eb084578 157 Pfam PF05981 CreA protein 22 144 8.6E-44 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AL538_24015 35212519d2c73185ea47a8d5eb084578 157 PIRSF PIRSF003174 1 154 2.1E-49 T 11-10-2018 IPR010292 Uncharacterised protein family CreA AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:1.10.240.10 198 311 5.1E-137 T 11-10-2018 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 Pfam PF00579 tRNA synthetases class I (W and Y) 3 296 7.9E-76 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.7E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 3.7E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.7E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.7E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 342 40.485 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 Gene3D G3DSA:3.40.50.620 5 340 5.1E-137 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 SUPERFAMILY SSF52374 5 341 6.68E-89 T 11-10-2018 AL538_08035 3d890e04ad3c9655e64a2a3478efc906 345 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 341 3.8E-107 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_19865 2dcb42a8c411a02e4ca28b15c277a275 230 Pfam PF03475 3-alpha domain 173 215 1.4E-11 T 11-10-2018 IPR005163 3-alpha domain AL538_19865 2dcb42a8c411a02e4ca28b15c277a275 230 SUPERFAMILY SSF50800 3 227 7.85E-70 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL538_19865 2dcb42a8c411a02e4ca28b15c277a275 230 Gene3D G3DSA:2.40.33.20 1 230 3.4E-70 T 11-10-2018 AL538_19865 2dcb42a8c411a02e4ca28b15c277a275 230 Pfam PF03473 MOSC domain 49 163 4.5E-21 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 SMART SM00471 163 299 6.8E-9 T 11-10-2018 IPR003607 HD/PDEase domain AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 Gene3D G3DSA:1.10.3210.10 21 329 6.0E-55 T 11-10-2018 AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 9.9E-29 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 TIGRFAM TIGR00277 HDIG: HDIG domain 165 258 5.3E-9 T 11-10-2018 IPR006675 HDIG domain AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 SUPERFAMILY SSF109604 159 329 1.69E-27 T 11-10-2018 AL538_07175 9922ad3b47dd7ed48fb620d2665e126f 416 Pfam PF01966 HD domain 169 289 2.6E-16 T 11-10-2018 IPR006674 HD domain AL538_10065 3a3f8c2d5034b16a0e9d5cda4063b0ee 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 38.758 T 11-10-2018 IPR019598 Universal stress protein B AL538_10065 3a3f8c2d5034b16a0e9d5cda4063b0ee 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 3.7E-51 T 11-10-2018 IPR019598 Universal stress protein B AL538_06455 3810fb3f97962763830aded3f3582c92 222 SMART SM00947 30 192 2.0E-66 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL538_06455 3810fb3f97962763830aded3f3582c92 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL538_06455 3810fb3f97962763830aded3f3582c92 222 Gene3D G3DSA:3.40.1050.10 1 222 3.1E-90 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AL538_06455 3810fb3f97962763830aded3f3582c92 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL538_06455 3810fb3f97962763830aded3f3582c92 222 Pfam PF00484 Carbonic anhydrase 38 188 2.8E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AL538_06455 3810fb3f97962763830aded3f3582c92 222 SUPERFAMILY SSF53056 2 212 4.97E-74 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Gene3D G3DSA:3.40.50.620 11 238 9.1E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Pfam PF01171 PP-loop family 21 204 3.4E-55 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 208 5.1E-52 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 SUPERFAMILY SSF82829 242 323 9.29E-23 T 11-10-2018 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 SMART SM00977 370 439 3.9E-23 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 SUPERFAMILY SSF52402 14 238 3.31E-59 T 11-10-2018 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Pfam PF11734 TilS substrate C-terminal domain 370 440 2.7E-24 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Pfam PF09179 TilS substrate binding domain 254 320 5.8E-17 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 SUPERFAMILY SSF56037 327 441 2.04E-28 T 11-10-2018 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Gene3D G3DSA:1.20.59.20 239 324 3.1E-26 T 11-10-2018 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 314 23.065 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_05390 9e8d2f1653c8366604c9a8668187fecd 443 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 370 416 3.2E-16 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 Pfam PF00221 Aromatic amino acid lyase 12 470 2.6E-187 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 Gene3D G3DSA:1.20.200.10 198 509 9.6E-122 T 11-10-2018 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.223 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 SUPERFAMILY SSF48557 4 506 4.55E-191 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 Gene3D G3DSA:1.10.275.10 2 197 1.2E-69 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 1.3E-213 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02165 30e75c7989a7bab7e19a85c23ab837d0 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 202 4.0E-103 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 PIRSF PIRSF005624 2 207 1.8E-52 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 Gene3D G3DSA:3.40.50.300 9 205 1.4E-52 T 11-10-2018 AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 205 47.37 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 1.1E-41 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL538_19120 fd6df7c737dddbbba1ae5014f9f91384 207 SUPERFAMILY SSF52540 6 200 1.33E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26170 dd568b0f372cd8a47700fd0e0dd6a46e 302 Pfam PF01040 UbiA prenyltransferase family 33 278 1.1E-62 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL538_26170 dd568b0f372cd8a47700fd0e0dd6a46e 302 Gene3D G3DSA:1.10.357.140 23 183 5.3E-21 T 11-10-2018 AL538_26170 dd568b0f372cd8a47700fd0e0dd6a46e 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 16 297 19.334 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL538_26170 dd568b0f372cd8a47700fd0e0dd6a46e 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 296 1.2E-97 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL538_26170 dd568b0f372cd8a47700fd0e0dd6a46e 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AL538_18125 4c54995d21ed2827935608f319c8b5a1 477 SUPERFAMILY SSF46689 211 262 1.48E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_18125 4c54995d21ed2827935608f319c8b5a1 477 Gene3D G3DSA:1.10.10.60 162 262 7.5E-22 T 11-10-2018 AL538_18125 4c54995d21ed2827935608f319c8b5a1 477 Gene3D G3DSA:2.60.40.2440 276 372 8.1E-11 T 11-10-2018 IPR038175 CBM21 domain superfamily GO:0005515 AL538_18125 4c54995d21ed2827935608f319c8b5a1 477 Pfam PF12833 Helix-turn-helix domain 182 258 1.2E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_18125 4c54995d21ed2827935608f319c8b5a1 477 SMART SM00342 174 256 2.5E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.30.450.20 373 492 1.6E-7 T 11-10-2018 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SMART SM00091 491 557 1.6E-5 T 11-10-2018 IPR000014 PAS domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SMART SM00052 786 1033 3.1E-59 T 11-10-2018 IPR001633 EAL domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.30.70.270 604 773 5.2E-46 T 11-10-2018 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SUPERFAMILY SSF55073 618 774 9.42E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.30.450.20 493 603 1.4E-20 T 11-10-2018 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SMART SM00086 437 479 59.0 T 11-10-2018 IPR001610 PAC motif AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SMART SM00086 564 602 0.0039 T 11-10-2018 IPR001610 PAC motif AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 3.3E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Pfam PF04392 ABC transporter substrate binding protein 37 277 2.6E-6 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.40.50.2300 137 258 2.7E-6 T 11-10-2018 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 770 8.8E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SUPERFAMILY SSF55785 476 600 2.39E-21 T 11-10-2018 IPR035965 PAS domain superfamily AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.20.20.450 774 1035 6.2E-75 T 11-10-2018 IPR035919 EAL domain superfamily AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Pfam PF13426 PAS domain 502 601 1.6E-12 T 11-10-2018 IPR000014 PAS domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Pfam PF00563 EAL domain 794 1028 2.9E-56 T 11-10-2018 IPR001633 EAL domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SUPERFAMILY SSF141868 792 1040 4.97E-70 T 11-10-2018 IPR035919 EAL domain superfamily AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SUPERFAMILY SSF55785 354 477 2.58E-5 T 11-10-2018 IPR035965 PAS domain superfamily AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 488 609 5.8E-18 T 11-10-2018 IPR000014 PAS domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 486 1.4E-5 T 11-10-2018 IPR000014 PAS domain AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 Gene3D G3DSA:3.40.50.2300 71 277 2.7E-6 T 11-10-2018 AL538_10030 1e48cecca496fab2dadb270e69acec31 1041 SMART SM00267 602 774 3.2E-44 T 11-10-2018 IPR000160 GGDEF domain AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Gene3D G3DSA:3.30.1490.20 21 104 7.0E-92 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.168 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Gene3D G3DSA:3.40.50.261 240 388 1.9E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 SUPERFAMILY SSF52210 239 385 3.66E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Gene3D G3DSA:3.30.470.20 1 234 7.0E-92 T 11-10-2018 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.2E-173 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Pfam PF08442 ATP-grasp domain 2 203 3.9E-79 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 SUPERFAMILY SSF56059 1 238 7.78E-79 T 11-10-2018 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 PIRSF PIRSF001554 1 388 8.2E-154 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 Pfam PF00549 CoA-ligase 262 382 9.3E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13770 d474a09a0b8008908a1474ea3bcc60fe 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF52172 533 643 4.54E-8 T 11-10-2018 IPR011006 CheY-like superfamily AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Pfam PF01627 Hpt domain 840 919 5.3E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Gene3D G3DSA:1.20.120.160 818 932 5.3E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SMART SM00387 402 518 1.6E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 9.7E-53 T 11-10-2018 IPR019247 Histidine kinase BarA, N-terminal AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SMART SM00388 290 355 2.9E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Pfam PF00072 Response regulator receiver domain 670 780 1.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Gene3D G3DSA:3.40.50.2300 669 796 2.6E-39 T 11-10-2018 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SMART SM00304 198 250 3.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF52172 667 784 4.27E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF47226 764 919 3.01E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 11-10-2018 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Gene3D G3DSA:3.30.565.10 357 521 9.8E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SUPERFAMILY SSF55874 344 516 3.14E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 11-10-2018 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 516 1.3E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 4.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 4.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 4.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 4.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 Gene3D G3DSA:1.20.1480.50 161 270 1.4E-7 T 11-10-2018 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SMART SM00073 829 927 2.0E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_06770 6e11901fd925a89019499b6dc9e22cca 932 SMART SM00448 668 781 2.0E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SMART SM00646 233 392 4.3E-64 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Pfam PF11741 AMIN domain 34 135 4.2E-18 T 11-10-2018 IPR021731 AMIN domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Gene3D G3DSA:3.10.350.10 465 526 7.1E-15 T 11-10-2018 IPR036779 LysM domain superfamily AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Gene3D G3DSA:3.10.350.10 527 576 1.1E-15 T 11-10-2018 IPR036779 LysM domain superfamily AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Gene3D G3DSA:3.10.350.10 404 464 4.4E-16 T 11-10-2018 IPR036779 LysM domain superfamily AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SUPERFAMILY SSF54106 476 521 8.76E-10 T 11-10-2018 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Pfam PF01476 LysM domain 479 521 6.5E-12 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Pfam PF01476 LysM domain 414 456 1.0E-14 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Pfam PF01476 LysM domain 532 574 6.7E-13 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 172 392 1.9E-49 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Gene3D G3DSA:3.40.630.40 158 402 2.5E-69 T 11-10-2018 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SUPERFAMILY SSF54106 531 574 4.71E-10 T 11-10-2018 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SUPERFAMILY SSF54106 412 456 1.57E-10 T 11-10-2018 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SMART SM00257 478 521 2.3E-14 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SMART SM00257 531 574 1.4E-12 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SMART SM00257 413 456 9.9E-16 T 11-10-2018 IPR018392 LysM domain AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 SUPERFAMILY SSF53187 170 395 3.45E-53 T 11-10-2018 AL538_08110 df5ec8388ddb529fced819d9c562d88a 576 Gene3D G3DSA:2.60.40.3500 23 137 1.7E-27 T 11-10-2018 AL538_22765 703a8301649e6a1b82f3a2659ac0fcdf 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 2.6E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_22765 703a8301649e6a1b82f3a2659ac0fcdf 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 2.0E-10 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL538_22765 703a8301649e6a1b82f3a2659ac0fcdf 157 SUPERFAMILY SSF54534 19 156 3.93E-52 T 11-10-2018 AL538_22765 703a8301649e6a1b82f3a2659ac0fcdf 157 Gene3D G3DSA:3.10.50.40 20 157 6.8E-54 T 11-10-2018 AL538_09335 b70625f321bc50d6c67a422acd73ddb4 257 Gene3D G3DSA:3.40.50.720 2 257 1.9E-81 T 11-10-2018 AL538_09335 b70625f321bc50d6c67a422acd73ddb4 257 Pfam PF00899 ThiF family 10 251 6.4E-57 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL538_09335 b70625f321bc50d6c67a422acd73ddb4 257 SUPERFAMILY SSF69572 2 254 2.88E-70 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 SMART SM00491 535 671 3.6E-25 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 Gene3D G3DSA:3.40.50.300 499 689 6.1E-33 T 11-10-2018 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 SUPERFAMILY SSF52540 243 666 6.2E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.678 T 11-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 Gene3D G3DSA:3.40.50.300 25 306 7.0E-40 T 11-10-2018 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 SUPERFAMILY SSF52540 14 666 7.55E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 Pfam PF13307 Helicase C-terminal domain 526 684 2.2E-35 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL538_14720 06de50c49bfb2ffb32fd9cb18f931210 691 Pfam PF06733 DEAD_2 197 263 8.0E-5 T 11-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 Pfam PF13344 Haloacid dehalogenase-like hydrolase 9 101 3.8E-19 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 Gene3D G3DSA:3.40.50.1000 85 181 1.3E-56 T 11-10-2018 IPR023214 HAD superfamily AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 SUPERFAMILY SSF56784 5 254 7.32E-40 T 11-10-2018 IPR036412 HAD-like superfamily AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 Pfam PF13242 HAD-hyrolase-like 181 252 4.9E-9 T 11-10-2018 AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 Gene3D G3DSA:3.40.50.1000 9 231 1.3E-56 T 11-10-2018 IPR023214 HAD superfamily AL538_10690 b89f6af65bea61296c60c642b9f2424f 258 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 9 229 1.6E-30 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AL538_01810 89d64391a1b6d9cc7b3e3c2f3a758847 510 SUPERFAMILY SSF53720 6 502 4.58E-102 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_01810 89d64391a1b6d9cc7b3e3c2f3a758847 510 Gene3D G3DSA:3.40.605.10 31 505 3.6E-214 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_01810 89d64391a1b6d9cc7b3e3c2f3a758847 510 Pfam PF00171 Aldehyde dehydrogenase family 11 452 1.4E-46 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_01810 89d64391a1b6d9cc7b3e3c2f3a758847 510 Gene3D G3DSA:3.40.309.10 256 440 3.6E-214 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 SMART SM00862 139 215 4.9E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 Gene3D G3DSA:3.40.50.2300 1 123 1.8E-35 T 11-10-2018 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 SUPERFAMILY SSF46894 141 215 7.94E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 Gene3D G3DSA:1.10.10.10 124 221 1.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 SUPERFAMILY SSF52172 2 128 1.39E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 1.1E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_20455 19fd4e6be7730c808fba36cfe0752234 221 SMART SM00448 2 112 9.9E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 Gene3D G3DSA:1.10.287.950 187 519 5.1E-70 T 11-10-2018 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 Pfam PF17203 Single cache domain 3 54 164 1.0E-12 T 11-10-2018 IPR033463 Single cache domain 3 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 483 6.7E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 SMART SM00304 188 242 1.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 SUPERFAMILY SSF103190 30 164 3.06E-22 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 Gene3D G3DSA:3.30.450.20 25 156 1.6E-5 T 11-10-2018 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 Pfam PF00672 HAMP domain 189 237 2.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 SUPERFAMILY SSF58104 210 519 1.03E-75 T 11-10-2018 AL538_25115 19306738b7d5b5022b5900b8e37ddd68 519 SMART SM00283 257 518 5.6E-74 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_16550 521fac2923305c6ab2b11da590248ca9 397 Gene3D G3DSA:1.20.1090.10 201 395 1.1E-51 T 11-10-2018 AL538_16550 521fac2923305c6ab2b11da590248ca9 397 Gene3D G3DSA:3.40.50.1970 10 200 2.7E-53 T 11-10-2018 AL538_16550 521fac2923305c6ab2b11da590248ca9 397 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_16550 521fac2923305c6ab2b11da590248ca9 397 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 386 2.4E-105 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_16550 521fac2923305c6ab2b11da590248ca9 397 SUPERFAMILY SSF56796 26 394 1.05E-108 T 11-10-2018 AL538_11130 43554514460a8220bba08c09c5e20310 322 Pfam PF16868 NMT1-like family 30 319 1.4E-97 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_11130 43554514460a8220bba08c09c5e20310 322 SUPERFAMILY SSF53850 25 321 2.03E-89 T 11-10-2018 AL538_11130 43554514460a8220bba08c09c5e20310 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 4.2E-114 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_11130 43554514460a8220bba08c09c5e20310 322 Gene3D G3DSA:3.40.190.10 117 255 1.4E-111 T 11-10-2018 AL538_11130 43554514460a8220bba08c09c5e20310 322 Gene3D G3DSA:3.40.190.10 30 319 1.4E-111 T 11-10-2018 AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 1.9E-24 T 11-10-2018 AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 Gene3D G3DSA:3.40.50.1000 9 196 5.5E-31 T 11-10-2018 IPR023214 HAD superfamily AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 SUPERFAMILY SSF56784 6 193 5.28E-21 T 11-10-2018 IPR036412 HAD-like superfamily AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 2.9E-30 T 11-10-2018 AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 196 5.1E-33 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL538_18710 4a09e164057e046ca7aa93e76c65b853 209 Gene3D G3DSA:1.20.1440.100 21 93 5.5E-31 T 11-10-2018 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 518 6.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 Gene3D G3DSA:1.10.287.950 221 553 4.5E-73 T 11-10-2018 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 SUPERFAMILY SSF58104 244 553 3.66E-75 T 11-10-2018 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 Pfam PF17200 Single Cache domain 2 47 188 5.2E-30 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 SMART SM01049 44 130 6.1E-23 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 SMART SM00283 291 552 4.6E-76 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 2.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 2.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 2.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 Gene3D G3DSA:3.30.450.20 29 202 1.1E-33 T 11-10-2018 AL538_19295 65c52b00dc5ab2746a16d772bc12f3d2 553 SMART SM00304 222 276 2.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_18540 a308e5039803b1f6dbac80eb5a2b49ea 105 Pfam PF13642 protein structure with unknown function 4 103 1.3E-31 T 11-10-2018 IPR025284 Protein of unknown function DUF4144 AL538_18540 a308e5039803b1f6dbac80eb5a2b49ea 105 Gene3D G3DSA:2.40.10.320 1 58 2.9E-5 T 11-10-2018 AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 Pfam PF13307 Helicase C-terminal domain 462 619 5.1E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 SUPERFAMILY SSF52540 14 236 1.27E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 Pfam PF04851 Type III restriction enzyme, res subunit 19 236 1.4E-5 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 Gene3D G3DSA:3.40.50.300 19 287 1.2E-49 T 11-10-2018 AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 SUPERFAMILY SSF52540 42 601 2.37E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 SMART SM00487 17 310 0.0033 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 SMART SM00491 477 606 1.0E-45 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AL538_13840 8639227627aed69d6359a8a093e7a7dd 641 Gene3D G3DSA:3.40.50.300 445 637 2.7E-36 T 11-10-2018 AL538_24220 9959027c188c2d7ce203bea31992b8d8 477 Pfam PF01266 FAD dependent oxidoreductase 12 395 2.4E-11 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_24220 9959027c188c2d7ce203bea31992b8d8 477 SUPERFAMILY SSF51905 9 298 1.08E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24220 9959027c188c2d7ce203bea31992b8d8 477 Gene3D G3DSA:3.50.50.60 1 83 1.6E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_26795 54237fa5e11f2f1cb55e1a6f9c63acd3 176 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 4.4E-21 T 11-10-2018 IPR000182 GNAT domain AL538_26795 54237fa5e11f2f1cb55e1a6f9c63acd3 176 Gene3D G3DSA:3.40.630.30 5 173 1.8E-51 T 11-10-2018 AL538_26795 54237fa5e11f2f1cb55e1a6f9c63acd3 176 SUPERFAMILY SSF55729 3 164 1.12E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 Gene3D G3DSA:3.40.50.300 296 582 1.3E-64 T 11-10-2018 AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 7.9E-20 T 11-10-2018 IPR022216 Putative ABC cobalt transporter AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 Gene3D G3DSA:3.40.50.300 1 254 4.0E-68 T 11-10-2018 AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 SUPERFAMILY SSF52540 298 524 1.81E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 Pfam PF00005 ABC transporter 20 170 1.4E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 SMART SM00382 29 221 8.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 SMART SM00382 324 510 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 Pfam PF00005 ABC transporter 315 461 3.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 SUPERFAMILY SSF52540 2 235 2.53E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17395 7aeb9af7b4402e0f8fdf3fe60d8b78d6 585 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 Gene3D G3DSA:1.10.287.950 89 418 1.0E-68 T 11-10-2018 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 SMART SM00283 156 417 1.0E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 6.1E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 SUPERFAMILY SSF58104 109 418 6.15E-76 T 11-10-2018 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.2E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.2E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_11460 3dd6ec484f3772978a4d02319996b69b 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.2E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF02817 e3 binding domain 113 146 3.4E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 3.5E-188 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF52777 173 401 1.25E-90 T 11-10-2018 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF00364 Biotin-requiring enzyme 4 76 3.5E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF51230 1 95 2.75E-24 T 11-10-2018 IPR011053 Single hybrid motif AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:4.10.320.10 102 152 3.7E-22 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 SUPERFAMILY SSF47005 106 150 5.49E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:3.30.559.10 170 402 2.9E-98 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Gene3D G3DSA:2.40.50.100 1 79 1.5E-21 T 11-10-2018 AL538_13765 585e4ab7a39b8e3bf6bd532c7b2f025f 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AL538_25190 ec71525be37b01215cbcffca30b5121f 278 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25190 ec71525be37b01215cbcffca30b5121f 278 Pfam PF00005 ABC transporter 25 166 1.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25190 ec71525be37b01215cbcffca30b5121f 278 SMART SM00382 34 216 2.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25190 ec71525be37b01215cbcffca30b5121f 278 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 2.9E-106 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 AL538_25190 ec71525be37b01215cbcffca30b5121f 278 SUPERFAMILY SSF52540 6 227 3.8E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25190 ec71525be37b01215cbcffca30b5121f 278 Gene3D G3DSA:3.40.50.300 3 277 3.7E-63 T 11-10-2018 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 Gene3D G3DSA:3.40.50.300 7 273 2.5E-58 T 11-10-2018 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 Pfam PF12848 ABC transporter 217 295 2.6E-27 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_07965 cad4cb2e159a4e12715f169721e14164 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 SUPERFAMILY SSF52540 276 494 1.59E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07965 cad4cb2e159a4e12715f169721e14164 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 Gene3D G3DSA:3.40.50.300 276 541 1.6E-54 T 11-10-2018 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 SMART SM00382 26 223 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07965 cad4cb2e159a4e12715f169721e14164 639 SMART SM00382 337 503 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07965 cad4cb2e159a4e12715f169721e14164 639 SUPERFAMILY SSF52540 2 258 1.89E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07965 cad4cb2e159a4e12715f169721e14164 639 Pfam PF00005 ABC transporter 17 178 5.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07965 cad4cb2e159a4e12715f169721e14164 639 Pfam PF00005 ABC transporter 328 459 3.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 SUPERFAMILY SSF52518 317 504 2.62E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 SUPERFAMILY SSF52518 9 381 7.61E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 SUPERFAMILY SSF52922 492 619 5.63E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.8E-29 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 SMART SM00861 319 483 7.8E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.0E-36 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 2.3E-118 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 1.8E-302 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Gene3D G3DSA:3.40.50.920 495 621 2.7E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Gene3D G3DSA:3.40.50.970 317 489 9.2E-65 T 11-10-2018 AL538_12885 d1545dea04e94985a41f49985bdb58d9 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.968 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Gene3D G3DSA:2.40.40.20 767 951 5.9E-48 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 SUPERFAMILY SSF50692 752 951 2.07E-38 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Gene3D G3DSA:3.40.228.10 195 394 4.4E-132 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 1.7E-20 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 5.8E-55 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 SMART SM00926 61 115 3.9E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 SUPERFAMILY SSF53706 60 646 3.01E-200 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 PIRSF PIRSF036643 779 950 1.9E-16 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 PIRSF PIRSF036643 641 678 130.0 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 PIRSF PIRSF036643 24 582 2.0E-113 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 Gene3D G3DSA:3.40.50.740 126 617 4.4E-132 T 11-10-2018 AL538_00660 243b8a49c14ee34d1ed527ca621dc0e1 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 5.0E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 5.0E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 5.0E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 496 5.7E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 SMART SM00304 203 256 2.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 SUPERFAMILY SSF58104 224 533 2.35E-61 T 11-10-2018 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 Gene3D G3DSA:1.10.287.950 203 534 6.8E-63 T 11-10-2018 AL538_03025 86a5cac61b599d06d984a517ef7aa6a1 541 SMART SM00283 271 532 9.2E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82693 152 341 4.71E-19 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.70.1440 672 873 2.1E-260 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82866 308 507 1.18E-33 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82714 200 283 2.09E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:1.20.1640.10 26 521 2.1E-260 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.70.1430 573 671 2.1E-260 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82714 730 804 3.01E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:1.20.1640.10 522 1025 2.1E-260 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82866 809 1032 1.57E-47 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 SUPERFAMILY SSF82693 56 151 5.93E-23 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 402 426 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 348 371 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 54 72 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 PRINTS PR00702 Acriflavin resistance protein family signature 26 50 2.0E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.2090.10 195 287 2.1E-260 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.70.1320 152 344 2.1E-260 T 11-10-2018 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.2090.10 723 813 2.1E-260 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Pfam PF00873 AcrB/AcrD/AcrF family 20 1029 3.1E-172 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_16010 022aa39d9ae787f1d2716e886f2ec277 1035 Gene3D G3DSA:3.30.70.1430 56 821 2.1E-260 T 11-10-2018 AL538_18835 6c55d935fd27dc0d928697b50b8d0252 415 SUPERFAMILY SSF53850 33 411 3.15E-62 T 11-10-2018 AL538_18835 6c55d935fd27dc0d928697b50b8d0252 415 Gene3D G3DSA:3.40.190.10 138 401 5.3E-75 T 11-10-2018 AL538_18835 6c55d935fd27dc0d928697b50b8d0252 415 Pfam PF13416 Bacterial extracellular solute-binding protein 46 347 5.9E-41 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_18835 6c55d935fd27dc0d928697b50b8d0252 415 Gene3D G3DSA:3.40.190.10 50 340 5.3E-75 T 11-10-2018 AL538_08940 c2ca48ff4abfe44faf8841305f2827e0 264 PIRSF PIRSF028177 1 264 1.6E-70 T 11-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 AL538_08940 c2ca48ff4abfe44faf8841305f2827e0 264 Gene3D G3DSA:3.40.50.150 4 246 5.6E-21 T 11-10-2018 AL538_08940 c2ca48ff4abfe44faf8841305f2827e0 264 SUPERFAMILY SSF53335 13 246 3.26E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_08940 c2ca48ff4abfe44faf8841305f2827e0 264 Pfam PF04072 Leucine carboxyl methyltransferase 64 204 8.7E-9 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AL538_27505 9efbd6078a5da4322a8c2e0800c78e51 41 Pfam PF11665 Protein of unknown function (DUF3265) 14 41 4.9E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_07490 bc33075d1e7410a3731bb50af9496401 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 25 4.1E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07490 bc33075d1e7410a3731bb50af9496401 193 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 6.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07490 bc33075d1e7410a3731bb50af9496401 193 SUPERFAMILY SSF54523 7 80 7.38E-5 T 11-10-2018 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.4E-80 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 Gene3D G3DSA:3.40.1450.10 78 310 1.5E-209 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 PIRSF PIRSF001492 1 510 5.0E-202 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 Pfam PF01676 Metalloenzyme superfamily 5 498 1.7E-80 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.218 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 3.0E-228 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 SUPERFAMILY SSF64158 78 308 1.26E-80 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 Gene3D G3DSA:3.40.720.10 6 509 1.5E-209 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_08215 27576e5cbd6183e1937a906cd497b71a 510 SUPERFAMILY SSF53649 4 509 1.67E-75 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.2E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Pfam PF00679 Elongation factor G C-terminus 399 482 8.9E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_06805 6fc33f4deef6133a765157739e8bf204 597 SMART SM00838 398 486 0.0031 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_06805 6fc33f4deef6133a765157739e8bf204 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AL538_06805 6fc33f4deef6133a765157739e8bf204 597 SUPERFAMILY SSF54980 399 493 1.49E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Gene3D G3DSA:3.30.70.3380 368 478 3.3E-40 T 11-10-2018 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 11-10-2018 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Gene3D G3DSA:2.40.30.10 186 285 6.1E-35 T 11-10-2018 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.016 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 SUPERFAMILY SSF50447 165 288 2.29E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Gene3D G3DSA:3.40.50.300 1 185 8.4E-71 T 11-10-2018 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 8.6E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.7E-301 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 SUPERFAMILY SSF52540 2 205 1.88E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06805 6fc33f4deef6133a765157739e8bf204 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_06805 6fc33f4deef6133a765157739e8bf204 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06805 6fc33f4deef6133a765157739e8bf204 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.1E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 SUPERFAMILY SSF53850 38 528 5.25E-142 T 11-10-2018 AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 PIRSF PIRSF002741 4 544 1.4E-108 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 Gene3D G3DSA:3.10.105.10 298 513 1.1E-187 T 11-10-2018 AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 461 9.9E-93 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 Gene3D G3DSA:3.40.190.10 44 525 1.1E-187 T 11-10-2018 AL538_01585 9fdcb7abbeb7ba296363b94b8765cab4 544 Gene3D G3DSA:3.90.76.10 73 196 1.1E-187 T 11-10-2018 AL538_19525 847302b50abe085a37f284eed970146b 704 Gene3D G3DSA:3.90.70.10 1 126 3.1E-38 T 11-10-2018 AL538_19525 847302b50abe085a37f284eed970146b 704 Gene3D G3DSA:1.20.1560.10 141 454 1.6E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_19525 847302b50abe085a37f284eed970146b 704 Pfam PF03412 Peptidase C39 family 5 124 4.2E-5 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AL538_19525 847302b50abe085a37f284eed970146b 704 Gene3D G3DSA:3.40.50.300 460 703 5.8E-75 T 11-10-2018 AL538_19525 847302b50abe085a37f284eed970146b 704 SUPERFAMILY SSF52540 459 693 2.66E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19525 847302b50abe085a37f284eed970146b 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.2E-293 T 11-10-2018 IPR017750 ATPase, type I secretion system AL538_19525 847302b50abe085a37f284eed970146b 704 SMART SM00382 495 681 2.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19525 847302b50abe085a37f284eed970146b 704 Pfam PF00005 ABC transporter 487 635 1.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19525 847302b50abe085a37f284eed970146b 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19525 847302b50abe085a37f284eed970146b 704 Pfam PF00664 ABC transporter transmembrane region 158 420 1.2E-21 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_19525 847302b50abe085a37f284eed970146b 704 SUPERFAMILY SSF90123 138 452 1.27E-50 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 Gene3D G3DSA:3.40.930.10 1 147 7.2E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 3.9E-42 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 SUPERFAMILY SSF52794 164 259 3.66E-35 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 Gene3D G3DSA:3.40.50.2300 154 263 6.8E-40 T 11-10-2018 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 1.4E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.4E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 SUPERFAMILY SSF55804 1 145 1.16E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.1E-31 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 3.2E-87 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_22005 dbec4d3a07d89cbb4cc92a69df05ce59 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 2.5E-16 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Gene3D G3DSA:3.40.50.2300 161 323 3.7E-92 T 11-10-2018 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 11-10-2018 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Gene3D G3DSA:3.40.50.2300 69 322 3.7E-92 T 11-10-2018 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 8.2E-44 T 11-10-2018 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 SMART SM00354 1 71 1.3E-38 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 SUPERFAMILY SSF53822 60 331 6.67E-95 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.61 T 11-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 AL538_14825 e89a3c50e88aa40d319dc68551500cb5 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_15000 642d4ec79d9fce5926639af66ebee5d6 107 SUPERFAMILY SSF52794 4 101 7.32E-35 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_15000 642d4ec79d9fce5926639af66ebee5d6 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 1.3E-21 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_15000 642d4ec79d9fce5926639af66ebee5d6 107 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 2.0E-35 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_15000 642d4ec79d9fce5926639af66ebee5d6 107 Gene3D G3DSA:3.40.50.2300 1 106 2.9E-39 T 11-10-2018 AL538_21790 de29397509dd3161dffcafa324c9b510 354 SUPERFAMILY SSF53774 27 353 2.36E-108 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 PIRSF PIRSF001220 24 354 1.2E-96 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AL538_21790 de29397509dd3161dffcafa324c9b510 354 SMART SM00870 29 348 1.7E-148 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 14 354 1.0E-161 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AL538_21790 de29397509dd3161dffcafa324c9b510 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 6.2E-23 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 6.2E-23 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 6.2E-23 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 Gene3D G3DSA:3.40.50.40 241 354 6.2E-42 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 Pfam PF00710 Asparaginase, N-terminal 29 222 2.7E-62 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AL538_21790 de29397509dd3161dffcafa324c9b510 354 PIRSF PIRSF500176 26 354 2.1E-82 T 11-10-2018 AL538_21790 de29397509dd3161dffcafa324c9b510 354 Gene3D G3DSA:3.40.50.1170 25 240 2.5E-86 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AL538_07770 470a9aa307adfccbe0cf1d023f88e910 171 Gene3D G3DSA:2.30.30.830 79 171 1.7E-24 T 11-10-2018 AL538_07770 470a9aa307adfccbe0cf1d023f88e910 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 1.1E-41 T 11-10-2018 IPR007446 Pilus assembly protein PilP AL538_07770 470a9aa307adfccbe0cf1d023f88e910 171 PIRSF PIRSF016481 1 171 5.1E-52 T 11-10-2018 IPR007446 Pilus assembly protein PilP AL538_15245 efd685bd2be7483f97fa77d7b22c7f91 297 Pfam PF07201 HrpJ-like domain 60 226 2.3E-37 T 11-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AL538_15245 efd685bd2be7483f97fa77d7b22c7f91 297 SUPERFAMILY SSF140591 75 272 9.02E-49 T 11-10-2018 AL538_15245 efd685bd2be7483f97fa77d7b22c7f91 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 1.3E-78 T 11-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 2.3E-50 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.8E-23 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 Gene3D G3DSA:3.30.750.70 70 134 5.7E-8 T 11-10-2018 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 SUPERFAMILY SSF100950 74 234 1.1E-28 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.4E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.4E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 SMART SM00420 6 58 1.2E-25 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 SUPERFAMILY SSF46785 5 77 3.28E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05840 93dc0366b5cb7af9b6d75639d04be6ea 263 SMART SM01134 72 234 1.2E-67 T 11-10-2018 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 321 1.3E-58 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.3E-23 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 SUPERFAMILY SSF46626 238 321 3.1E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.20.58.1490 1 94 1.5E-34 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.10.760.10 209 295 6.5E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Gene3D G3DSA:1.10.760.10 143 318 6.5E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 SUPERFAMILY SSF46626 55 238 5.16E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PIRSF PIRSF000006 1 322 1.9E-110 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 241 315 4.1E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.7E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 4.5E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_00765 1cd46c8f0ea2a7b524e428a26b5b97fe 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 4.5E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_07850 8f2220cde575eb23903ab69f5db02869 300 SUPERFAMILY SSF51730 22 294 5.69E-95 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AL538_07850 8f2220cde575eb23903ab69f5db02869 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 4.4E-100 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL538_07850 8f2220cde575eb23903ab69f5db02869 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.0E-102 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AL538_07850 8f2220cde575eb23903ab69f5db02869 300 Gene3D G3DSA:3.20.20.220 1 299 7.6E-112 T 11-10-2018 AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 Pfam PF00005 ABC transporter 22 159 4.4E-11 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 Pfam PF00005 ABC transporter 271 422 2.8E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 SMART SM00382 279 480 8.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 SUPERFAMILY SSF52540 234 456 8.57E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 SUPERFAMILY SSF52540 21 209 1.22E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 Gene3D G3DSA:3.40.50.300 3 219 1.1E-26 T 11-10-2018 AL538_25605 e18e3aa58d1356509e129988f6d2f4dc 482 Gene3D G3DSA:3.40.50.300 235 474 5.7E-41 T 11-10-2018 AL538_05490 25bed46c850fe358f46175129022bc32 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.341 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL538_05490 25bed46c850fe358f46175129022bc32 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 3.8E-56 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL538_05490 25bed46c850fe358f46175129022bc32 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 7.0E-66 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.40.630.30 713 879 7.1E-39 T 11-10-2018 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SUPERFAMILY SSF51735 2 128 3.2E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Pfam PF13380 CoA binding domain 12 122 3.5E-14 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 3.5E-44 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.40.50.261 119 277 6.7E-45 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.40.50.720 1 118 2.3E-26 T 11-10-2018 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SUPERFAMILY SSF55729 718 862 7.32E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.40.50.261 279 449 2.8E-48 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SUPERFAMILY SSF56059 476 684 6.24E-27 T 11-10-2018 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.30.1490.20 495 572 1.7E-55 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SUPERFAMILY SSF52210 118 276 1.19E-32 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Gene3D G3DSA:3.30.470.20 476 687 1.7E-55 T 11-10-2018 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 3.2E-7 T 11-10-2018 IPR000182 GNAT domain AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 Pfam PF13549 ATP-grasp domain 470 690 3.0E-67 T 11-10-2018 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SMART SM00881 7 102 1.8E-19 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL538_24265 a0fe43b7106afb404f69eaf80dd4dafc 879 SUPERFAMILY SSF52210 281 441 6.54E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.6E-147 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 PIRSF PIRSF000164 10 336 6.3E-107 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.753 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 3.9E-91 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 Gene3D G3DSA:3.20.20.70 2 336 4.6E-144 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 SUPERFAMILY SSF51395 1 336 8.66E-109 T 11-10-2018 AL538_00865 ce392dd4c37c9f72c38877545a7863e3 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 Pfam PF07729 FCD domain 82 206 8.6E-26 T 11-10-2018 IPR011711 GntR, C-terminal AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 SUPERFAMILY SSF46785 9 76 1.76E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 SMART SM00895 82 207 1.4E-20 T 11-10-2018 IPR011711 GntR, C-terminal AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 SUPERFAMILY SSF48008 78 214 3.66E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 Gene3D G3DSA:1.10.10.10 1 73 2.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 Gene3D G3DSA:1.20.120.530 78 223 9.3E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_01815 66b3e1d47a1db5e2de9f3c0c012f51b5 224 SMART SM00345 14 72 1.5E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 7.6E-198 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 SUPERFAMILY SSF51971 143 407 1.0E-65 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 Gene3D G3DSA:1.10.1060.10 10 143 4.2E-24 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 SUPERFAMILY SSF46548 2 155 3.4E-36 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 2.9E-24 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 Gene3D G3DSA:3.40.50.720 144 250 6.1E-14 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 11-10-2018 AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 Gene3D G3DSA:3.50.50.60 251 406 9.6E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_11755 c5b8b4631c9187411bc55eaafd017529 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 2.4E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 309 321 2.0E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 372 381 2.0E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 388 407 2.0E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00410 Phenol hydroxylase reductase family signature 478 486 2.0E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Gene3D G3DSA:2.40.30.10 278 377 2.3E-25 T 11-10-2018 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 SUPERFAMILY SSF63380 273 381 2.21E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Gene3D G3DSA:3.40.50.80 378 515 1.6E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 3.5E-29 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 4.9E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Gene3D G3DSA:3.10.20.30 521 605 7.0E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 SUPERFAMILY SSF141673 6 133 4.18E-28 T 11-10-2018 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Pfam PF03473 MOSC domain 139 262 7.7E-30 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 SUPERFAMILY SSF54292 501 604 1.84E-24 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 SUPERFAMILY SSF50800 5 264 1.88E-14 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 SUPERFAMILY SSF52343 368 508 1.96E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 535 597 5.1E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_22220 905c9c3983c2d68da59cdccb95b054f3 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 1.1E-15 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 Gene3D G3DSA:3.40.50.300 2 281 1.5E-55 T 11-10-2018 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 SUPERFAMILY SSF52540 2 238 1.93E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 Pfam PF00005 ABC transporter 339 467 3.6E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 SUPERFAMILY SSF52540 311 527 7.37E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 Gene3D G3DSA:3.40.50.300 282 534 2.7E-52 T 11-10-2018 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 Pfam PF00005 ABC transporter 18 184 4.0E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 Pfam PF12848 ABC transporter 224 308 3.1E-22 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 SMART SM00382 344 513 2.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17860 c1d9abc773d8fa8403b3bb8f3bbf087e 534 SMART SM00382 26 238 4.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05860 2b51a2a3238bd44830b9acce97646e7f 183 SUPERFAMILY SSF110857 1 123 1.05E-15 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AL538_05860 2b51a2a3238bd44830b9acce97646e7f 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.2E-7 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL538_05860 2b51a2a3238bd44830b9acce97646e7f 183 Gene3D G3DSA:3.10.490.10 1 120 7.7E-8 T 11-10-2018 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 SUPERFAMILY SSF54523 7 91 1.8E-9 T 11-10-2018 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 Gene3D G3DSA:3.55.40.10 33 201 1.1E-45 T 11-10-2018 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 Pfam PF12019 Type II transport protein GspH 42 182 5.1E-8 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 6.6E-21 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 6.6E-21 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL538_10275 4f69b96ee0b5e1dfca1448d787945550 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 6.6E-21 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 264 2.1E-8 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 SMART SM00382 39 233 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 SUPERFAMILY SSF52540 5 254 2.59E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 Gene3D G3DSA:3.40.50.300 3 307 3.6E-79 T 11-10-2018 AL538_19405 429fffd4fef99ff26bf0f8d3f4cae051 310 Pfam PF00005 ABC transporter 30 184 6.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 SUPERFAMILY SSF55347 288 451 1.25E-52 T 11-10-2018 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 Gene3D G3DSA:3.30.360.10 287 452 1.2E-113 T 11-10-2018 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 SUPERFAMILY SSF51735 128 304 1.16E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22530 9dcffefe1029295735300fdcd17076c4 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 6.6E-113 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 Gene3D G3DSA:3.40.50.720 129 462 1.2E-113 T 11-10-2018 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.4E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.4E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.4E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.4E-17 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 SMART SM00846 127 288 1.1E-49 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.3E-44 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22530 9dcffefe1029295735300fdcd17076c4 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 3.5E-21 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 Pfam PF03466 LysR substrate binding domain 103 290 9.6E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 Gene3D G3DSA:3.40.190.290 95 289 1.1E-51 T 11-10-2018 AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.5E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 SUPERFAMILY SSF46785 5 89 2.25E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 Gene3D G3DSA:1.10.10.10 4 94 4.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18030 0dbfb3d7e216d8b69de2beb3153f914b 305 SUPERFAMILY SSF53850 89 294 1.27E-34 T 11-10-2018 AL538_10870 6b594785b093e03486080683fa187678 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 3.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 SUPERFAMILY SSF50249 6 83 8.14E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_10870 6b594785b093e03486080683fa187678 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10870 6b594785b093e03486080683fa187678 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 Pfam PF00366 Ribosomal protein S17 10 77 3.4E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 3.1E-38 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.527 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10870 6b594785b093e03486080683fa187678 84 Gene3D G3DSA:2.40.50.140 1 84 6.6E-38 T 11-10-2018 AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 1.3E-23 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 11-10-2018 IPR028871 Blue (type 1) copper protein, binding site AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 Gene3D G3DSA:2.60.40.420 23 149 8.3E-45 T 11-10-2018 IPR008972 Cupredoxin AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 4.0E-63 T 11-10-2018 AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 SUPERFAMILY SSF49503 23 147 8.12E-45 T 11-10-2018 IPR008972 Cupredoxin AL538_27360 6f919b00c2619459637cb6cc4d231e18 150 TIGRFAM TIGR02695 azurin: azurin 25 149 7.2E-61 T 11-10-2018 IPR014068 Azurin AL538_07205 a4ebfea9f55462fc80c4e958772f2ab0 101 Gene3D G3DSA:3.40.50.2300 2 101 1.9E-38 T 11-10-2018 AL538_07205 a4ebfea9f55462fc80c4e958772f2ab0 101 SUPERFAMILY SSF52794 1 101 1.73E-36 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_07205 a4ebfea9f55462fc80c4e958772f2ab0 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.9E-24 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 SMART SM00382 300 444 4.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Gene3D G3DSA:1.10.10.60 541 587 1.1E-8 T 11-10-2018 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 SUPERFAMILY SSF46689 489 585 1.36E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Pfam PF02954 Bacterial regulatory protein, Fis family 556 581 7.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 549 566 9.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 566 586 9.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Gene3D G3DSA:3.40.50.300 266 452 5.9E-56 T 11-10-2018 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 SUPERFAMILY SSF52540 284 518 4.22E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Gene3D G3DSA:3.30.450.40 4 188 8.3E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Gene3D G3DSA:1.10.8.60 458 529 4.4E-9 T 11-10-2018 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Pfam PF00158 Sigma-54 interaction domain 285 445 5.5E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_01475 af2e59ea38ef9522503b56652dd3839d 587 Pfam PF01590 GAF domain 76 186 1.2E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 SUPERFAMILY SSF46785 4 86 1.83E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 Pfam PF03466 LysR substrate binding domain 88 292 7.4E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 Gene3D G3DSA:3.40.190.10 91 289 8.8E-61 T 11-10-2018 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 Gene3D G3DSA:3.40.190.10 163 263 8.8E-61 T 11-10-2018 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 SUPERFAMILY SSF53850 90 294 4.03E-45 T 11-10-2018 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22030 e4b8fb2157dc53eba5393aaa687bde74 295 Gene3D G3DSA:1.10.10.10 3 90 2.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21180 27731d5a6be8359c34d19090816f4b5c 224 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_21180 27731d5a6be8359c34d19090816f4b5c 224 Gene3D G3DSA:3.40.50.300 4 222 2.4E-66 T 11-10-2018 AL538_21180 27731d5a6be8359c34d19090816f4b5c 224 SMART SM00382 30 214 5.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21180 27731d5a6be8359c34d19090816f4b5c 224 Pfam PF00005 ABC transporter 21 166 6.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_21180 27731d5a6be8359c34d19090816f4b5c 224 SUPERFAMILY SSF52540 6 217 8.76E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 8.0E-60 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 Gene3D G3DSA:2.40.280.10 7 136 2.0E-43 T 11-10-2018 IPR023620 Small protein B AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 68.209 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 SUPERFAMILY SSF74982 8 139 1.44E-47 T 11-10-2018 IPR023620 Small protein B AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 Pfam PF01668 SmpB protein 15 157 5.3E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL538_12685 69ff1ee73a91d608cac39c11e3c7c2cb 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 8.7E-52 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 SUPERFAMILY SSF111369 64 286 1.29E-20 T 11-10-2018 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 Gene3D G3DSA:2.40.30.170 211 287 2.0E-32 T 11-10-2018 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 Gene3D G3DSA:2.40.50.100 63 210 2.0E-32 T 11-10-2018 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 Gene3D G3DSA:1.10.287.470 96 173 2.0E-32 T 11-10-2018 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 251 5.3E-28 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_21985 b863c1306ed6c52b19532e5f48d10e49 331 Pfam PF13533 Biotin-lipoyl like 64 110 8.4E-13 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_09705 39795f72610012686fa4a67658042fa9 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 SUPERFAMILY SSF56719 395 796 6.8E-88 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 Gene3D G3DSA:3.30.230.10 221 393 8.5E-73 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_09705 39795f72610012686fa4a67658042fa9 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.978 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 11-10-2018 IPR006171 TOPRIM domain AL538_09705 39795f72610012686fa4a67658042fa9 805 Pfam PF00204 DNA gyrase B 221 391 2.4E-60 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 794 2.6E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 6.9E-71 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 SUPERFAMILY SSF54211 221 393 3.41E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_09705 39795f72610012686fa4a67658042fa9 805 SMART SM00433 35 798 6.1E-276 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 Gene3D G3DSA:3.40.50.670 399 572 3.5E-75 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 Gene3D G3DSA:3.30.565.10 1 220 4.7E-95 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_09705 39795f72610012686fa4a67658042fa9 805 Gene3D G3DSA:3.40.50.670 706 804 2.5E-27 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_09705 39795f72610012686fa4a67658042fa9 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_09705 39795f72610012686fa4a67658042fa9 805 SUPERFAMILY SSF55874 4 211 4.58E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_09705 39795f72610012686fa4a67658042fa9 805 Gene3D G3DSA:3.10.20.690 593 684 9.9E-36 T 11-10-2018 AL538_09705 39795f72610012686fa4a67658042fa9 805 SMART SM00387 31 175 5.0E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09705 39795f72610012686fa4a67658042fa9 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.2E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.2090.10 698 786 7.3E-289 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82693 41 130 1.65E-23 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.70.1320 134 325 7.3E-289 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82714 182 263 1.57E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 4.6E-278 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82866 782 1008 9.55E-48 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82866 290 489 3.27E-47 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:1.20.1640.10 501 1001 7.3E-289 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82693 136 323 5.36E-22 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.2090.10 178 268 7.3E-289 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.70.1430 555 647 7.3E-289 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-76 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.70.1430 40 794 7.3E-289 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:3.30.70.1440 648 843 7.3E-289 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82714 701 783 8.63E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 SUPERFAMILY SSF82693 553 650 1.88E-21 T 11-10-2018 AL538_09840 5e91b5876d096653a5086c3cb6a20c5e 1040 Gene3D G3DSA:1.20.1640.10 10 500 7.3E-289 T 11-10-2018 AL538_21130 60bf7ee47557538a9a4d93761caea8e4 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 1.2E-19 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL538_21130 60bf7ee47557538a9a4d93761caea8e4 133 SUPERFAMILY SSF51316 2 131 1.15E-43 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_21130 60bf7ee47557538a9a4d93761caea8e4 133 Gene3D G3DSA:3.90.1590.10 1 129 1.0E-20 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 7.8E-22 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Gene3D G3DSA:3.20.20.60 400 739 4.4E-105 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 4.0E-15 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Gene3D G3DSA:3.30.450.40 1 160 9.5E-40 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 1.5E-96 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Gene3D G3DSA:1.10.274.10 190 314 7.3E-57 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 5.4E-137 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Gene3D G3DSA:3.50.30.10 173 399 7.3E-57 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 SUPERFAMILY SSF51621 423 714 1.13E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 SMART SM00065 17 163 3.2E-18 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 SUPERFAMILY SSF52009 293 412 3.14E-26 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 Pfam PF01590 GAF domain 17 152 1.4E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 SUPERFAMILY SSF55781 2 158 1.05E-30 T 11-10-2018 AL538_11945 c52eb3704b2671ada2f4f635ee0cc048 748 SUPERFAMILY SSF47831 202 311 1.06E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Gene3D G3DSA:1.20.58.1830 339 373 2.9E-34 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Gene3D G3DSA:1.20.58.1830 5 32 1.1E-57 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 4.6E-21 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 SUPERFAMILY SSF64518 1 373 4.18E-77 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Gene3D G3DSA:2.170.280.10 184 281 2.9E-34 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 PRINTS PR00207 Flagellin signature 36 53 2.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 PRINTS PR00207 Flagellin signature 110 133 2.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 PRINTS PR00207 Flagellin signature 75 94 2.8E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Gene3D G3DSA:1.20.1330.10 282 333 2.9E-34 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Gene3D G3DSA:1.20.1330.10 44 165 1.1E-57 T 11-10-2018 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Pfam PF07196 Flagellin hook IN motif 200 245 8.7E-7 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_13500 525ef79c4e1fdedb658b67d0d1675165 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.7E-33 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SMART SM00304 368 421 3.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Pfam PF00672 HAMP domain 369 417 3.0E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SUPERFAMILY SSF141868 599 846 1.12E-82 T 11-10-2018 IPR035919 EAL domain superfamily AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SUPERFAMILY SSF158472 369 418 6.67E-7 T 11-10-2018 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Gene3D G3DSA:3.30.450.20 220 336 6.4E-18 T 11-10-2018 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Gene3D G3DSA:1.10.287.130 367 429 3.1E-6 T 11-10-2018 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 428 579 8.3E-28 T 11-10-2018 IPR000160 GGDEF domain AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SMART SM00267 416 582 6.2E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SUPERFAMILY SSF55073 432 584 4.63E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Gene3D G3DSA:3.30.70.270 430 595 5.2E-40 T 11-10-2018 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Pfam PF00563 EAL domain 599 834 1.9E-67 T 11-10-2018 IPR001633 EAL domain AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Gene3D G3DSA:3.20.20.450 596 847 4.7E-89 T 11-10-2018 IPR035919 EAL domain superfamily AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 SMART SM00052 592 839 1.8E-98 T 11-10-2018 IPR001633 EAL domain AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Gene3D G3DSA:3.30.450.20 146 219 6.4E-18 T 11-10-2018 AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 576 7.8E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_10175 4d9f4fe2a20381cecb86766a366f2602 848 Pfam PF02743 Cache domain 47 328 1.1E-21 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_16665 61973b2405f71382698b04b1b2fcb487 176 SUPERFAMILY SSF53098 4 175 6.41E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_16665 61973b2405f71382698b04b1b2fcb487 176 Pfam PF00929 Exonuclease 7 171 3.8E-12 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_16665 61973b2405f71382698b04b1b2fcb487 176 SMART SM00479 5 176 1.8E-5 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_16665 61973b2405f71382698b04b1b2fcb487 176 Gene3D G3DSA:3.30.420.10 1 176 1.5E-38 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_13285 f1f2e7dbec3ab13645894e7bc209ce8c 269 SUPERFAMILY SSF48452 191 255 2.09E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_13285 f1f2e7dbec3ab13645894e7bc209ce8c 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.2E-43 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_13285 f1f2e7dbec3ab13645894e7bc209ce8c 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.4E-23 T 11-10-2018 AL538_05350 cb09bc5958eaf4bbde43429ba87a7018 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.48 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AL538_05350 cb09bc5958eaf4bbde43429ba87a7018 154 Pfam PF00075 RNase H 3 141 9.9E-53 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AL538_05350 cb09bc5958eaf4bbde43429ba87a7018 154 Gene3D G3DSA:3.30.420.10 1 154 1.2E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_05350 cb09bc5958eaf4bbde43429ba87a7018 154 SUPERFAMILY SSF53098 3 143 1.64E-57 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_26620 0229040dd59a97d3418cde5676d0091f 314 SUPERFAMILY SSF53613 6 305 9.67E-65 T 11-10-2018 IPR029056 Ribokinase-like AL538_26620 0229040dd59a97d3418cde5676d0091f 314 Pfam PF00294 pfkB family carbohydrate kinase 7 307 5.4E-49 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_26620 0229040dd59a97d3418cde5676d0091f 314 Gene3D G3DSA:3.40.1190.20 4 312 4.9E-67 T 11-10-2018 IPR029056 Ribokinase-like AL538_26620 0229040dd59a97d3418cde5676d0091f 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_02760 101ad4906a92efd5d0be112beded24ba 119 Pfam PF13103 TonB C terminal 36 95 1.1E-6 T 11-10-2018 AL538_02760 101ad4906a92efd5d0be112beded24ba 119 Gene3D G3DSA:3.30.1150.10 28 119 9.9E-14 T 11-10-2018 AL538_02760 101ad4906a92efd5d0be112beded24ba 119 SUPERFAMILY SSF74653 39 117 3.79E-7 T 11-10-2018 AL538_15640 2f028bb2d08be866f2dc9febf7d7c09c 398 Gene3D G3DSA:3.40.50.150 106 243 4.5E-5 T 11-10-2018 AL538_15640 2f028bb2d08be866f2dc9febf7d7c09c 398 Pfam PF13679 Methyltransferase domain 107 230 3.7E-18 T 11-10-2018 IPR025714 Methyltransferase domain AL538_15640 2f028bb2d08be866f2dc9febf7d7c09c 398 SUPERFAMILY SSF53335 117 183 3.13E-5 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_25510 db702f421823bcce9435af648ec6930f 275 Gene3D G3DSA:3.40.190.10 26 269 4.1E-81 T 11-10-2018 AL538_25510 db702f421823bcce9435af648ec6930f 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 19 269 2.8E-66 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL538_25510 db702f421823bcce9435af648ec6930f 275 Pfam PF12849 PBP superfamily domain 21 256 1.3E-36 T 11-10-2018 IPR024370 PBP domain AL538_25510 db702f421823bcce9435af648ec6930f 275 SUPERFAMILY SSF53850 24 270 1.79E-65 T 11-10-2018 AL538_25510 db702f421823bcce9435af648ec6930f 275 Gene3D G3DSA:3.40.190.10 97 231 4.1E-81 T 11-10-2018 AL538_21905 a2baa8ed161f14eec3294abe424f9c94 345 Gene3D G3DSA:1.10.287.470 103 226 4.7E-14 T 11-10-2018 AL538_21905 a2baa8ed161f14eec3294abe424f9c94 345 Gene3D G3DSA:2.40.30.170 262 299 4.7E-14 T 11-10-2018 AL538_21905 a2baa8ed161f14eec3294abe424f9c94 345 Pfam PF13437 HlyD family secretion protein 226 302 3.5E-7 T 11-10-2018 AL538_21905 a2baa8ed161f14eec3294abe424f9c94 345 Gene3D G3DSA:2.40.50.100 72 261 4.7E-14 T 11-10-2018 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 SUPERFAMILY SSF51230 207 298 1.44E-23 T 11-10-2018 IPR011053 Single hybrid motif AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Pfam PF02817 e3 binding domain 326 360 1.8E-14 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Pfam PF00364 Biotin-requiring enzyme 207 277 1.1E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Pfam PF00364 Biotin-requiring enzyme 4 73 7.7E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Pfam PF00364 Biotin-requiring enzyme 105 175 8.5E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 SUPERFAMILY SSF51230 1 94 5.63E-24 T 11-10-2018 IPR011053 Single hybrid motif AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 402 632 3.1E-79 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 190 633 7.2E-204 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 SUPERFAMILY SSF51230 104 193 1.44E-22 T 11-10-2018 IPR011053 Single hybrid motif AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Gene3D G3DSA:2.40.50.100 104 181 9.8E-21 T 11-10-2018 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Gene3D G3DSA:2.40.50.100 206 283 1.1E-20 T 11-10-2018 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Gene3D G3DSA:2.40.50.100 1 80 7.9E-22 T 11-10-2018 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Gene3D G3DSA:3.30.559.10 386 633 9.4E-96 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 SUPERFAMILY SSF52777 391 632 2.0E-80 T 11-10-2018 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 SUPERFAMILY SSF47005 319 364 3.4E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_06475 22e6292cfda7c88b2ccae978a22f848c 633 Gene3D G3DSA:4.10.320.10 325 370 6.3E-21 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AL538_23770 2358ca65d36300686511f4a911122b38 586 SUPERFAMILY SSF52540 336 582 5.01E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23770 2358ca65d36300686511f4a911122b38 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 1.7E-282 T 11-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein AL538_23770 2358ca65d36300686511f4a911122b38 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.7E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_23770 2358ca65d36300686511f4a911122b38 586 Gene3D G3DSA:3.40.50.300 335 585 1.7E-93 T 11-10-2018 AL538_23770 2358ca65d36300686511f4a911122b38 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_23770 2358ca65d36300686511f4a911122b38 586 SUPERFAMILY SSF90123 15 324 5.89E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_23770 2358ca65d36300686511f4a911122b38 586 Gene3D G3DSA:1.20.1560.10 11 332 1.3E-83 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_23770 2358ca65d36300686511f4a911122b38 586 SMART SM00382 371 572 4.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23770 2358ca65d36300686511f4a911122b38 586 Pfam PF00005 ABC transporter 363 511 2.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07415 4e6564f262b802ef9646d0b75c57e553 250 SUPERFAMILY SSF55120 7 221 3.04E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_07415 4e6564f262b802ef9646d0b75c57e553 250 Gene3D G3DSA:3.30.2350.10 4 220 3.5E-68 T 11-10-2018 AL538_07415 4e6564f262b802ef9646d0b75c57e553 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_07415 4e6564f262b802ef9646d0b75c57e553 250 Pfam PF00849 RNA pseudouridylate synthase 23 174 1.3E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_17380 c7d1306c281575d51635013d36a680fb 128 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.4E-40 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL538_17380 c7d1306c281575d51635013d36a680fb 128 PIRSF PIRSF028770 1 127 8.5E-70 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 Gene3D G3DSA:3.40.50.300 128 333 1.6E-75 T 11-10-2018 AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 SUPERFAMILY SSF52540 1 332 6.9E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 Gene3D G3DSA:3.40.50.720 51 127 1.0E-18 T 11-10-2018 AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 47 124 5.6E-22 T 11-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 327 7.2E-74 T 11-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop AL538_17505 bf030561a1bab7fea85a0abf5e03bc1d 334 PIRSF PIRSF026760 3 334 1.8E-104 T 11-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 Gene3D G3DSA:3.30.700.10 18 143 1.8E-18 T 11-10-2018 AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 121 1.3E-11 T 11-10-2018 IPR031982 Type IV minor pilin ComP AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 SUPERFAMILY SSF54523 17 135 1.83E-17 T 11-10-2018 AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 37 5.8E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12740 bd97e90e3ed0d61bc20d32e4306ed03d 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 2.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Gene3D G3DSA:3.30.1390.30 86 161 3.3E-51 T 11-10-2018 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Gene3D G3DSA:3.40.710.10 250 633 6.1E-90 T 11-10-2018 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.8E-48 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Gene3D G3DSA:3.90.1310.10 65 249 3.3E-51 T 11-10-2018 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 617 8.6E-73 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 625 49.445 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 621 9.6E-228 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 SUPERFAMILY SSF56519 57 253 1.57E-55 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AL538_05900 1f9373a01f49c355083a0b11546eb8da 634 SUPERFAMILY SSF56601 255 621 1.2E-92 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_04275 b0bbe6daae755b7c2e32d4254e8890e8 579 Gene3D G3DSA:3.40.50.300 330 558 1.0E-36 T 11-10-2018 AL538_04275 b0bbe6daae755b7c2e32d4254e8890e8 579 SUPERFAMILY SSF52540 103 565 1.06E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04275 b0bbe6daae755b7c2e32d4254e8890e8 579 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 114 563 3.2E-92 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 Gene3D G3DSA:3.40.50.1580 1 238 4.5E-76 T 11-10-2018 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 Pfam PF01048 Phosphorylase superfamily 15 217 8.2E-41 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-118 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 SUPERFAMILY SSF53167 3 234 2.62E-92 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_06060 47ccca79d83381fa43a4f7190e914f18 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.523 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_14880 65c6a3f58a7e8b7e6bd4c16ad0805b87 323 Gene3D G3DSA:3.40.50.150 64 293 4.4E-21 T 11-10-2018 AL538_14880 65c6a3f58a7e8b7e6bd4c16ad0805b87 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 3.0E-148 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL538_14880 65c6a3f58a7e8b7e6bd4c16ad0805b87 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.564 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AL538_14880 65c6a3f58a7e8b7e6bd4c16ad0805b87 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.1E-173 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AL538_14880 65c6a3f58a7e8b7e6bd4c16ad0805b87 323 SUPERFAMILY SSF53335 91 323 1.21E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 Gene3D G3DSA:3.10.450.140 5 105 1.0E-42 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.649 T 11-10-2018 IPR007376 dsDNA mimic, putative AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.0E-45 T 11-10-2018 IPR007376 dsDNA mimic, putative AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 SUPERFAMILY SSF102816 3 105 7.59E-50 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-49 T 11-10-2018 IPR007376 dsDNA mimic, putative AL538_03340 6427387c3b1d9e2197cc9a8c64af2ea9 106 PIRSF PIRSF004916 1 105 1.6E-52 T 11-10-2018 IPR007376 dsDNA mimic, putative AL538_22245 d4b5c69ac0f4f213ba75b363f9d2a812 368 SUPERFAMILY SSF69593 90 318 1.57E-9 T 11-10-2018 AL538_22245 d4b5c69ac0f4f213ba75b363f9d2a812 368 Pfam PF01553 Acyltransferase 92 200 8.8E-9 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_24895 018e6ec9130b8ec920b56070f1bf5b3d 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 3.7E-202 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_24895 018e6ec9130b8ec920b56070f1bf5b3d 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 6.9E-185 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_27015 03f7587751ca28d78e2b0577c438614f 535 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 6.4E-170 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_27015 03f7587751ca28d78e2b0577c438614f 535 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 1.8E-134 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_27015 03f7587751ca28d78e2b0577c438614f 535 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 SUPERFAMILY SSF54211 134 278 6.14E-53 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 Gene3D G3DSA:3.30.1700.10 129 305 6.3E-71 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 9.5E-143 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.687 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 Gene3D G3DSA:3.30.230.20 1 128 1.1E-51 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 7.8E-109 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 AL538_11665 4a1e442487159e54f32c7e90f5045b4d 305 SUPERFAMILY SSF54211 3 126 1.52E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_07695 7948fe40a435c367a323a7b3c0468117 550 Gene3D G3DSA:3.40.50.10490 99 292 7.4E-241 T 11-10-2018 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 Gene3D G3DSA:1.10.1390.10 508 550 3.6E-20 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 Pfam PF00342 Phosphoglucose isomerase 53 542 4.5E-254 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 Gene3D G3DSA:3.40.50.10490 13 507 7.4E-241 T 11-10-2018 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.905 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 SUPERFAMILY SSF53697 6 548 2.03E-226 T 11-10-2018 AL538_07695 7948fe40a435c367a323a7b3c0468117 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 SMART SM00448 2 112 6.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 SUPERFAMILY SSF52172 1 116 1.99E-24 T 11-10-2018 IPR011006 CheY-like superfamily AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 Pfam PF00072 Response regulator receiver domain 4 113 5.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 Gene3D G3DSA:3.40.50.12740 2 202 1.4E-52 T 11-10-2018 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 SUPERFAMILY SSF46894 124 198 2.62E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.2E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_24495 0aa9c636e68dbcfb084403b3f5fa3f44 202 SMART SM00421 140 197 3.8E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07035 962f286713427003f3fd1f36ef2074cd 306 Gene3D G3DSA:3.40.710.10 1 306 1.3E-108 T 11-10-2018 AL538_07035 962f286713427003f3fd1f36ef2074cd 306 Pfam PF04960 Glutaminase 22 306 9.3E-112 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL538_07035 962f286713427003f3fd1f36ef2074cd 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 7.9E-130 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL538_07035 962f286713427003f3fd1f36ef2074cd 306 SUPERFAMILY SSF56601 4 306 9.48E-113 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_07035 962f286713427003f3fd1f36ef2074cd 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.968 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AL538_25720 699f546950ae04e392aca66f6dad76da 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_25720 699f546950ae04e392aca66f6dad76da 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_25720 699f546950ae04e392aca66f6dad76da 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 3.8E-40 T 11-10-2018 AL538_25720 699f546950ae04e392aca66f6dad76da 335 SUPERFAMILY SSF53822 61 332 5.1E-93 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_25720 699f546950ae04e392aca66f6dad76da 335 Gene3D G3DSA:3.40.50.2300 162 291 2.7E-87 T 11-10-2018 AL538_25720 699f546950ae04e392aca66f6dad76da 335 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 11-10-2018 AL538_25720 699f546950ae04e392aca66f6dad76da 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_25720 699f546950ae04e392aca66f6dad76da 335 SMART SM00354 1 72 6.3E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_25720 699f546950ae04e392aca66f6dad76da 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_25720 699f546950ae04e392aca66f6dad76da 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_25720 699f546950ae04e392aca66f6dad76da 335 Gene3D G3DSA:3.40.50.2300 70 323 2.7E-87 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 SUPERFAMILY SSF81593 818 946 4.79E-32 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:1.20.120.330 288 443 1.7E-54 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:1.10.4050.10 2 112 7.3E-13 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 913 1.7E-7 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 3.7E-45 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:3.30.460.10 115 287 1.9E-65 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:1.20.120.330 815 947 1.4E-43 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 SUPERFAMILY SSF81301 528 818 9.48E-89 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.291 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 SUPERFAMILY SSF81593 290 439 9.42E-42 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 SUPERFAMILY SSF81301 24 289 4.36E-87 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:3.30.460.100 565 814 2.9E-92 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Gene3D G3DSA:1.20.120.1510 451 564 3.2E-33 T 11-10-2018 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 1.4E-92 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL538_11465 3ade4fcfb70ce3da69980432a46666dd 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 8.2E-98 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 Gene3D G3DSA:3.30.70.360 181 294 2.7E-128 T 11-10-2018 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.8E-21 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 1.7E-46 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 1.8E-179 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 Gene3D G3DSA:3.40.630.10 9 364 2.7E-128 T 11-10-2018 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.992 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 SUPERFAMILY SSF53187 6 376 7.86E-67 T 11-10-2018 AL538_05225 e162bdc273e8af05f62c25601a6affa3 378 SUPERFAMILY SSF55031 181 291 4.78E-28 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_00705 2e8057ca8e1e0f6eb0ac901baa30fb0d 286 SUPERFAMILY SSF161098 10 275 6.02E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00705 2e8057ca8e1e0f6eb0ac901baa30fb0d 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.1E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_00705 2e8057ca8e1e0f6eb0ac901baa30fb0d 286 Gene3D G3DSA:1.10.3720.10 7 278 9.3E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL538_03810 4a844c84e5e324bdf9b0405584d9523c 467 Pfam PF00817 impB/mucB/samB family 23 146 2.4E-8 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL538_03810 4a844c84e5e324bdf9b0405584d9523c 467 Gene3D G3DSA:1.10.150.20 167 207 3.8E-9 T 11-10-2018 AL538_03810 4a844c84e5e324bdf9b0405584d9523c 467 Gene3D G3DSA:3.30.70.270 69 166 3.8E-9 T 11-10-2018 AL538_03810 4a844c84e5e324bdf9b0405584d9523c 467 SUPERFAMILY SSF56672 6 225 2.05E-34 T 11-10-2018 AL538_03810 4a844c84e5e324bdf9b0405584d9523c 467 Gene3D G3DSA:2.30.40.20 27 68 3.8E-9 T 11-10-2018 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Pfam PF07730 Histidine kinase 369 437 1.2E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Gene3D G3DSA:1.10.287.130 176 281 7.2E-7 T 11-10-2018 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 1.1E-21 T 11-10-2018 IPR029095 NarX-like, N-terminal AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 SMART SM00387 478 571 1.1E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 SUPERFAMILY SSF55874 451 567 7.86E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 SUPERFAMILY SSF158472 178 225 4.84E-8 T 11-10-2018 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 PIRSF PIRSF003167 2 577 1.1E-177 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Gene3D G3DSA:1.20.120.960 40 148 2.7E-11 T 11-10-2018 AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 568 1.8E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 Gene3D G3DSA:3.30.565.10 438 575 5.8E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22685 dcd4d0a4fecb7c9b040ae855304b4bd9 578 SMART SM00304 176 228 5.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_21760 f55b7203118f64766995813368f82409 98 Pfam PF07876 Stress responsive A/B Barrel Domain 2 97 1.5E-31 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AL538_21760 f55b7203118f64766995813368f82409 98 SMART SM00886 2 98 2.7E-33 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel AL538_21760 f55b7203118f64766995813368f82409 98 Gene3D G3DSA:3.30.70.100 1 98 1.6E-36 T 11-10-2018 AL538_21760 f55b7203118f64766995813368f82409 98 SUPERFAMILY SSF54909 2 97 3.71E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_00220 198942ae2f84ce24b2657af0612e23db 363 Pfam PF00092 von Willebrand factor type A domain 107 297 1.5E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_00220 198942ae2f84ce24b2657af0612e23db 363 SMART SM00327 105 304 3.4E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_00220 198942ae2f84ce24b2657af0612e23db 363 SUPERFAMILY SSF53300 103 300 9.35E-35 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_00220 198942ae2f84ce24b2657af0612e23db 363 Gene3D G3DSA:3.40.50.410 105 304 1.9E-51 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.3E-62 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 Gene3D G3DSA:3.40.50.880 286 543 1.1E-104 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 SUPERFAMILY SSF52540 3 269 2.04E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 SUPERFAMILY SSF52317 289 538 1.5E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 Gene3D G3DSA:3.40.50.300 1 285 1.3E-133 T 11-10-2018 AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.2E-124 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.252 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL538_06750 4b177acc71dcb821c5581218bd9942d7 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 2.7E-260 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AL538_05660 f0685140486d4bc7ccc2a5cd74578881 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.296 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL538_05660 f0685140486d4bc7ccc2a5cd74578881 261 PIRSF PIRSF009437 1 261 2.1E-102 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL538_05660 f0685140486d4bc7ccc2a5cd74578881 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 1.8E-96 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL538_05660 f0685140486d4bc7ccc2a5cd74578881 261 SMART SM00900 148 246 8.0E-32 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_05660 f0685140486d4bc7ccc2a5cd74578881 261 Pfam PF04205 FMN-binding domain 148 243 8.5E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Gene3D G3DSA:3.40.50.300 157 348 7.4E-63 T 11-10-2018 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Gene3D G3DSA:1.10.8.60 756 849 7.9E-9 T 11-10-2018 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Gene3D G3DSA:3.40.50.300 537 753 4.6E-63 T 11-10-2018 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 840 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SUPERFAMILY SSF52540 166 488 5.68E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Gene3D G3DSA:3.40.50.300 350 531 2.6E-39 T 11-10-2018 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Gene3D G3DSA:1.10.1780.10 1 156 2.2E-31 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 756 830 4.1E-9 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SMART SM01086 756 848 2.6E-4 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SUPERFAMILY SSF81923 11 131 5.1E-14 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Pfam PF07724 AAA domain (Cdc48 subfamily) 584 749 1.5E-37 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 695 709 1.4E-31 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 588 606 1.4E-31 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 633 651 1.4E-31 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 662 680 1.4E-31 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 322 8.5E-9 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SMART SM00382 204 350 5.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SMART SM00382 584 754 2.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 74 9.6E-4 T 11-10-2018 IPR004176 Clp, N-terminal AL538_24865 d878dc8db754c0ab0d7eaa7b68b5c702 851 SUPERFAMILY SSF52540 533 830 2.6E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08425 8be7c226467244fd5e5692773d828dc7 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 7.4E-258 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AL538_08425 8be7c226467244fd5e5692773d828dc7 575 Pfam PF00474 Sodium:solute symporter family 33 296 4.0E-36 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_08425 8be7c226467244fd5e5692773d828dc7 575 Pfam PF00474 Sodium:solute symporter family 376 491 5.3E-16 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_08425 8be7c226467244fd5e5692773d828dc7 575 Gene3D G3DSA:1.20.1730.10 346 555 1.7E-26 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_08425 8be7c226467244fd5e5692773d828dc7 575 Gene3D G3DSA:1.20.1730.10 21 328 5.3E-35 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_22375 9c634ce971b6a6cafe51888870bbfb78 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 1.9E-20 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL538_22375 9c634ce971b6a6cafe51888870bbfb78 199 SUPERFAMILY SSF52833 20 197 7.24E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_22375 9c634ce971b6a6cafe51888870bbfb78 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_22375 9c634ce971b6a6cafe51888870bbfb78 199 PIRSF PIRSF001488 1 199 4.5E-63 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL538_22375 9c634ce971b6a6cafe51888870bbfb78 199 Gene3D G3DSA:3.40.30.10 17 199 5.6E-51 T 11-10-2018 AL538_13015 cdfa1725632086bc601cd836819405f4 561 Gene3D G3DSA:3.20.20.80 176 480 5.0E-115 T 11-10-2018 AL538_13015 cdfa1725632086bc601cd836819405f4 561 SUPERFAMILY SSF51445 9 476 1.66E-161 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_13015 cdfa1725632086bc601cd836819405f4 561 Gene3D G3DSA:2.60.40.1180 481 559 3.6E-17 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_13015 cdfa1725632086bc601cd836819405f4 561 SMART SM00642 18 419 1.4E-161 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_13015 cdfa1725632086bc601cd836819405f4 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 4.8E-128 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_13015 cdfa1725632086bc601cd836819405f4 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 2.6E-265 T 11-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AL538_13015 cdfa1725632086bc601cd836819405f4 561 Gene3D G3DSA:3.90.400.10 114 175 4.1E-30 T 11-10-2018 AL538_13015 cdfa1725632086bc601cd836819405f4 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 553 6.9E-8 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal AL538_13015 cdfa1725632086bc601cd836819405f4 561 SUPERFAMILY SSF51011 480 559 1.84E-15 T 11-10-2018 AL538_13015 cdfa1725632086bc601cd836819405f4 561 Gene3D G3DSA:3.20.20.80 1 113 9.5E-51 T 11-10-2018 AL538_21025 922592a145772c37fd3aa689114ebeca 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 84 261 4.3E-42 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL538_21025 922592a145772c37fd3aa689114ebeca 265 Gene3D G3DSA:2.30.30.760 205 265 1.2E-11 T 11-10-2018 AL538_21025 922592a145772c37fd3aa689114ebeca 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 1.8E-38 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL538_21025 922592a145772c37fd3aa689114ebeca 265 SMART SM00858 141 202 3.6E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL538_12400 ea19e904f40c17f346034cb0ecab194c 321 Pfam PF13413 Helix-turn-helix domain 20 78 1.2E-18 T 11-10-2018 AL538_12400 ea19e904f40c17f346034cb0ecab194c 321 SUPERFAMILY SSF47413 13 80 9.29E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_12400 ea19e904f40c17f346034cb0ecab194c 321 SMART SM00530 19 80 3.9E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_12400 ea19e904f40c17f346034cb0ecab194c 321 Pfam PF13464 Domain of unknown function (DUF4115) 246 319 7.0E-26 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AL538_12400 ea19e904f40c17f346034cb0ecab194c 321 Gene3D G3DSA:1.10.260.40 5 116 2.2E-24 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:1.20.1640.10 15 508 1.4E-273 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82693 46 127 3.4E-20 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.70.1430 562 664 1.4E-273 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82714 716 800 3.4E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.1E-32 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 5.1E-246 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.70.1440 665 862 1.4E-273 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.2090.10 182 274 1.4E-273 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82866 798 1037 5.49E-52 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.70.1320 135 328 1.4E-273 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82714 185 269 3.27E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82866 294 498 9.02E-42 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.2090.10 716 804 1.4E-273 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:1.20.1640.10 509 1030 1.4E-273 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 SUPERFAMILY SSF82693 137 328 9.16E-22 T 11-10-2018 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AL538_26675 0026fd5251341870ac6b45d753856efa 1069 Gene3D G3DSA:3.30.70.1430 42 812 1.4E-273 T 11-10-2018 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SMART SM00382 198 343 2.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SMART SM00382 597 763 2.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 7.2E-57 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Gene3D G3DSA:3.40.50.300 348 544 1.4E-66 T 11-10-2018 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Gene3D G3DSA:1.10.1780.10 1 148 3.8E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SUPERFAMILY SSF81923 4 156 5.98E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.5E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SUPERFAMILY SSF52540 159 545 1.52E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Gene3D G3DSA:3.40.50.300 158 347 1.1E-74 T 11-10-2018 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Gene3D G3DSA:3.40.50.300 550 764 5.4E-89 T 11-10-2018 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.6E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Gene3D G3DSA:1.10.8.60 766 857 2.6E-27 T 11-10-2018 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SUPERFAMILY SSF52540 546 853 3.43E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 SMART SM01086 766 855 6.1E-37 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.2E-14 T 11-10-2018 IPR004176 Clp, N-terminal AL538_12125 1c046b2c21546fdc2d75eb0b1dae19ca 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.4E-11 T 11-10-2018 IPR004176 Clp, N-terminal AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 498 6.1E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 495 3.0E-29 T 11-10-2018 IPR000160 GGDEF domain AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 Gene3D G3DSA:3.30.450.20 85 171 1.2E-9 T 11-10-2018 AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 Pfam PF02743 Cache domain 98 265 4.0E-13 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 SMART SM00267 327 500 1.6E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 SUPERFAMILY SSF103190 118 178 3.92E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 Gene3D G3DSA:3.30.70.270 345 507 3.3E-36 T 11-10-2018 AL538_01010 f31d7eab81d42163c59db96d4e07326e 513 SUPERFAMILY SSF55073 347 502 5.96E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88659 124 185 1.35E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.1740.10 1 121 7.7E-46 T 11-10-2018 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 5.0E-103 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 SUPERFAMILY SSF88946 2 108 1.44E-32 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 Gene3D G3DSA:1.10.10.10 122 192 1.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06825 4168a0a5653f888219be7f9bccb2da67 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.5E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_20865 612e7f23b7c02b6382d3976c98e3776e 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 6.6E-145 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL538_28235 0a08625e411714312bf2fa8781778808 95 SUPERFAMILY SSF82771 4 90 1.96E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_28235 0a08625e411714312bf2fa8781778808 95 Pfam PF01541 GIY-YIG catalytic domain 6 77 1.1E-16 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL538_28235 0a08625e411714312bf2fa8781778808 95 Gene3D G3DSA:3.40.1440.10 3 93 1.6E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 SUPERFAMILY SSF55194 2 184 5.63E-72 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 Gene3D G3DSA:1.10.132.20 101 185 1.6E-29 T 11-10-2018 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 Pfam PF01765 Ribosome recycling factor 20 183 2.8E-63 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 Gene3D G3DSA:3.30.1360.40 35 100 7.8E-31 T 11-10-2018 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.779 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 Gene3D G3DSA:1.10.132.20 1 34 5.0E-10 T 11-10-2018 AL538_05460 a11a9b6eeed802826b071fda2cbe891c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.4E-76 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.420.20 104 115 2.0E-9 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 SUPERFAMILY SSF111369 135 326 1.31E-17 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.420.20 328 417 3.9E-21 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.30.170 116 129 2.0E-9 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.50.100 204 248 3.6E-29 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.30.170 249 322 3.6E-29 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.50.320 418 488 1.1E-19 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.50.320 497 568 6.0E-16 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 394 8.8E-35 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Pfam PF11604 Copper binding periplasmic protein CusF 421 486 3.3E-22 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Pfam PF11604 Copper binding periplasmic protein CusF 501 566 1.3E-18 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:2.40.50.100 130 164 2.0E-9 T 11-10-2018 AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 2.4E-78 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_26670 105e73bd75218e30fbcaf0ca41756d4a 576 Gene3D G3DSA:1.10.287.470 165 177 2.0E-9 T 11-10-2018 AL538_02300 6c00930851887a2c84a2a6937425f9de 81 Gene3D G3DSA:3.10.450.530 1 76 1.5E-14 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AL538_02300 6c00930851887a2c84a2a6937425f9de 81 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 2 73 2.9E-23 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AL538_04330 aaeb92d054c95937d2893110e4230c15 461 SUPERFAMILY SSF161098 207 447 2.09E-34 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04330 aaeb92d054c95937d2893110e4230c15 461 PRINTS PR00342 Rhesus blood group protein signature 366 382 3.7E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL538_04330 aaeb92d054c95937d2893110e4230c15 461 PRINTS PR00342 Rhesus blood group protein signature 169 185 3.7E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL538_04330 aaeb92d054c95937d2893110e4230c15 461 PRINTS PR00342 Rhesus blood group protein signature 311 324 3.7E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AL538_04330 aaeb92d054c95937d2893110e4230c15 461 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 162 456 1.8E-88 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL538_04330 aaeb92d054c95937d2893110e4230c15 461 Pfam PF12501 Phosphate ATP-binding cassette transporter 5 178 5.8E-25 T 11-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AL538_04330 aaeb92d054c95937d2893110e4230c15 461 Gene3D G3DSA:1.10.3720.10 228 459 1.3E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04330 aaeb92d054c95937d2893110e4230c15 461 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 250 457 1.1E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Gene3D G3DSA:1.10.287.730 143 169 5.5E-14 T 11-10-2018 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 SUPERFAMILY SSF53335 139 425 1.98E-78 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 SUPERFAMILY SSF48013 1 146 8.76E-37 T 11-10-2018 IPR035926 NusB-like superfamily AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 9.6E-154 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Gene3D G3DSA:3.40.50.150 228 425 1.1E-70 T 11-10-2018 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Gene3D G3DSA:3.30.70.1170 170 227 1.2E-26 T 11-10-2018 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.1E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.1E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.1E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.1E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.1E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Gene3D G3DSA:1.10.940.10 1 142 5.2E-45 T 11-10-2018 IPR035926 NusB-like superfamily AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.2E-69 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AL538_09465 4297b2575a9aa01ba22192dcb2e4680c 427 Pfam PF01029 NusB family 1 123 1.7E-24 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL538_00870 929d7c38a0322c918617961dc7e8cf96 1613 PIRSF PIRSF036761 1 1610 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL538_00870 929d7c38a0322c918617961dc7e8cf96 1613 SUPERFAMILY SSF53223 754 940 3.45E-26 T 11-10-2018 AL538_00870 929d7c38a0322c918617961dc7e8cf96 1613 SUPERFAMILY SSF51735 945 1281 1.38E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_00870 929d7c38a0322c918617961dc7e8cf96 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AL538_12720 6fb80d444007239d821e97c725014f3e 198 SUPERFAMILY SSF51064 143 198 1.11E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 SUPERFAMILY SSF58014 44 142 3.92E-29 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.631 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 Pfam PF01025 GrpE 35 198 2.7E-51 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 Gene3D G3DSA:3.90.20.20 36 141 3.0E-32 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 PRINTS PR00773 GrpE protein signature 67 83 5.7E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 PRINTS PR00773 GrpE protein signature 95 110 5.7E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 PRINTS PR00773 GrpE protein signature 177 196 5.7E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 PRINTS PR00773 GrpE protein signature 150 165 5.7E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AL538_12720 6fb80d444007239d821e97c725014f3e 198 Gene3D G3DSA:2.30.22.10 142 198 7.9E-26 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 Pfam PF13347 MFS/sugar transport protein 10 437 4.0E-94 T 11-10-2018 AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 SUPERFAMILY SSF103473 10 443 1.7E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 Gene3D G3DSA:1.20.1250.20 227 435 1.6E-5 T 11-10-2018 AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 Gene3D G3DSA:1.20.1250.20 9 205 4.9E-13 T 11-10-2018 AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 451 2.1E-163 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AL538_05180 9d8036849d7d0e0f20c1228359a08643 475 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 11-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.1E-77 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 6.8E-145 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.394 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 Gene3D G3DSA:3.90.226.10 3 225 1.0E-83 T 11-10-2018 AL538_14320 32a6c4dffc832af5a32b5c22f39777b7 288 SUPERFAMILY SSF52096 22 284 4.41E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09615 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 Pfam PF00696 Amino acid kinase family 6 278 6.5E-48 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 Gene3D G3DSA:1.20.120.1320 42 135 9.2E-99 T 11-10-2018 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 11-10-2018 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 SUPERFAMILY SSF55021 377 449 2.16E-15 T 11-10-2018 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 Gene3D G3DSA:3.30.70.260 310 383 8.3E-48 T 11-10-2018 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 SUPERFAMILY SSF53633 6 293 9.43E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 PIRSF PIRSF000726 2 450 4.6E-129 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 2.1E-123 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.4E-122 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 Gene3D G3DSA:3.40.1160.10 6 290 9.2E-99 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07590 81bb8eed1ff8fe315be77611c8da1316 450 Gene3D G3DSA:3.30.70.260 304 447 8.3E-48 T 11-10-2018 AL538_03595 edbf242e8384f30c6ccb875aa92aa12c 230 Pfam PF00005 ABC transporter 26 174 5.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_03595 edbf242e8384f30c6ccb875aa92aa12c 230 SUPERFAMILY SSF52540 6 228 2.87E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03595 edbf242e8384f30c6ccb875aa92aa12c 230 Gene3D G3DSA:3.40.50.300 4 230 1.6E-71 T 11-10-2018 AL538_03595 edbf242e8384f30c6ccb875aa92aa12c 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_03595 edbf242e8384f30c6ccb875aa92aa12c 230 SMART SM00382 35 222 5.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 4.8E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 SMART SM00344 1 110 8.3E-16 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 SUPERFAMILY SSF46785 1 56 1.78E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 Pfam PF01037 Lrp/AsnC ligand binding domain 76 139 9.5E-13 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 Gene3D G3DSA:1.10.10.10 1 52 2.9E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 Gene3D G3DSA:3.30.70.920 57 148 2.8E-13 T 11-10-2018 AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 SUPERFAMILY SSF54909 63 145 4.16E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.7E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.7E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22505 c521b3bf317e2a2d2738b06c51ff544e 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.7E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 SUPERFAMILY SSF69765 1 157 7.72E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 Pfam PF02542 YgbB family 2 155 8.6E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 3.8E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.091 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_06730 073d9343d98930c6ca22a3a19e3b2a04 158 Gene3D G3DSA:3.30.1330.50 1 158 7.6E-70 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 Gene3D G3DSA:1.10.10.10 138 197 4.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16120 4f7e173e60421afa95353dc804bd47be 198 SUPERFAMILY SSF46894 134 193 1.33E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 3.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 3.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 3.6E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 Gene3D G3DSA:3.40.50.2300 3 131 3.5E-35 T 11-10-2018 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 SMART SM00421 137 194 1.8E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 SMART SM00448 6 117 2.6E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 Pfam PF00072 Response regulator receiver domain 9 117 1.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 193 1.6E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16120 4f7e173e60421afa95353dc804bd47be 198 SUPERFAMILY SSF52172 10 138 6.12E-30 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SUPERFAMILY SSF47226 877 985 3.79E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SMART SM00387 581 694 7.6E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SUPERFAMILY SSF47384 457 535 6.28E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 1.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:3.40.50.2300 707 845 1.3E-32 T 11-10-2018 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SMART SM00073 888 985 7.9E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:1.10.287.130 404 532 5.0E-26 T 11-10-2018 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:3.30.565.10 533 697 2.7E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:1.20.58.920 180 322 3.4E-52 T 11-10-2018 IPR038188 TorS, sensor domain superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:1.20.58.920 47 179 1.0E-47 T 11-10-2018 IPR038188 TorS, sensor domain superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SUPERFAMILY SSF55874 523 697 1.31E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 1.7E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Pfam PF00072 Response regulator receiver domain 714 832 4.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SMART SM00448 712 832 2.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 PIRSF PIRSF036437 1 987 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 3.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 3.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 3.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 3.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SUPERFAMILY SSF52172 712 844 1.37E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Pfam PF01627 Hpt domain 900 976 7.0E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 SMART SM00388 469 534 1.2E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 983 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 AL538_23045 e0570e878e93ba089ce3bc6b76327863 987 Gene3D G3DSA:1.20.120.160 871 987 6.6E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 SUPERFAMILY SSF52540 83 344 1.11E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 SMART SM00382 145 323 2.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 Gene3D G3DSA:1.20.1270.330 346 420 4.2E-21 T 11-10-2018 AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 338 1.4E-43 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 329 338 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_00470 47ff2903d35c5e59ea97d3917f7ae602 420 Gene3D G3DSA:3.40.50.300 78 345 1.3E-66 T 11-10-2018 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.235 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.7E-118 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 SUPERFAMILY SSF53383 10 343 4.81E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 Gene3D G3DSA:3.40.640.10 49 253 1.9E-121 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 Gene3D G3DSA:3.90.1150.10 4 336 1.9E-121 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 Pfam PF00155 Aminotransferase class I and II 42 337 4.1E-56 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_15810 9b50c14bdb86176751a95da8d704b63c 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Gene3D G3DSA:1.10.3090.10 180 430 1.7E-93 T 11-10-2018 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 445 7.9E-38 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 SUPERFAMILY SSF81891 180 392 4.84E-47 T 11-10-2018 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Gene3D G3DSA:3.30.460.10 18 178 8.1E-64 T 11-10-2018 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Pfam PF01743 Poly A polymerase head domain 52 182 2.4E-39 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 452 37.709 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 270 2.9E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 5.2E-163 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AL538_06415 a463afa79c9ed3d79ee5391f6b3a6849 453 SUPERFAMILY SSF81301 24 179 3.38E-40 T 11-10-2018 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 462 479 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 SUPERFAMILY SSF55604 451 524 1.31E-16 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 Gene3D G3DSA:3.30.1360.60 447 525 8.0E-23 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 Pfam PF02378 Phosphotransferase system, EIIC 10 357 4.8E-55 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 414 510 2.3E-16 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_17700 1c6dfd97bb5bc1e9e4d7f5ed870cc12f 528 Pfam PF00367 phosphotransferase system, EIIB 452 482 2.4E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 SMART SM00450 16 169 2.3E-4 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 SMART SM00450 195 314 2.6E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 Gene3D G3DSA:3.40.250.10 34 190 5.6E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 SUPERFAMILY SSF52821 45 184 2.36E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 SUPERFAMILY SSF52821 192 314 6.42E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 Pfam PF00581 Rhodanese-like domain 81 164 3.8E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 Pfam PF00581 Rhodanese-like domain 201 309 1.2E-12 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_16110 be7bada06e2240a334c4bcb397a77aca 327 Gene3D G3DSA:3.40.250.10 193 321 4.8E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 Gene3D G3DSA:3.40.50.450 4 287 6.3E-117 T 11-10-2018 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.151 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 SUPERFAMILY SSF53784 3 310 1.02E-112 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PIRSF PIRSF000532 1 320 2.1E-127 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 3.8E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 Pfam PF00365 Phosphofructokinase 4 276 2.2E-109 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 Gene3D G3DSA:3.40.50.460 143 252 6.3E-117 T 11-10-2018 AL538_08355 3e8008d6bf413b87b5f087cca276d5a3 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 6.8E-130 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 2.5E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 Gene3D G3DSA:3.40.50.720 2 170 3.7E-65 T 11-10-2018 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 8.1E-51 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 6.8E-63 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 SUPERFAMILY SSF51735 6 170 3.94E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 Gene3D G3DSA:3.90.110.10 171 439 7.4E-100 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_07190 05355ef3c0f7efa4d6f5bca7c13b6ae3 440 SUPERFAMILY SSF56327 173 436 2.12E-93 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:2.40.50.100 1022 1126 9.2E-29 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.2E-28 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:1.10.132.30 641 790 5.8E-66 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:2.40.50.100 1151 1214 8.2E-64 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.5E-77 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:1.10.274.100 490 640 1.7E-39 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.4E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 8.2E-64 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.95 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Gene3D G3DSA:2.40.50.100 948 1021 2.2E-23 T 11-10-2018 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_08650 8fdbb45fd3a4614117da589332782e85 1400 SMART SM00663 235 514 1.1E-184 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 SUPERFAMILY SSF49299 609 691 1.18E-20 T 11-10-2018 IPR035986 PKD domain superfamily AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Gene3D G3DSA:1.10.1740.190 347 490 1.8E-33 T 11-10-2018 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Pfam PF08453 Peptidase family M9 N-terminal 78 257 9.0E-53 T 11-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Gene3D G3DSA:1.10.390.20 491 611 5.9E-8 T 11-10-2018 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 SMART SM00089 611 693 1.4E-23 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Pfam PF01752 Collagenase 317 600 7.9E-106 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Gene3D G3DSA:2.60.40.10 612 691 6.4E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 Pfam PF00801 PKD domain 622 681 4.7E-12 T 11-10-2018 IPR000601 PKD domain AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 2.1E-35 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 2.1E-35 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 2.1E-35 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 2.1E-35 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01715 7a9ab746225ebd37220ceae0feb2707d 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 2.1E-35 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 Gene3D G3DSA:1.10.10.10 10 152 1.5E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 SMART SM00347 39 137 3.3E-24 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 SUPERFAMILY SSF46785 12 151 8.2E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19990 d4c3a287e93825da77451afe1f75dc1d 152 Pfam PF01047 MarR family 46 103 1.0E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_13050 11472fbb857a546d6605b1290d35c13f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.481 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AL538_13050 11472fbb857a546d6605b1290d35c13f 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.3E-29 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 AL538_13050 11472fbb857a546d6605b1290d35c13f 92 Gene3D G3DSA:3.30.70.260 6 92 2.4E-33 T 11-10-2018 AL538_13050 11472fbb857a546d6605b1290d35c13f 92 SUPERFAMILY SSF117991 7 92 2.62E-31 T 11-10-2018 IPR027471 YbeD-like domain superfamily AL538_08590 1928749e2c542304b39cfcb15506a520 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.8E-35 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Gene3D G3DSA:3.30.1490.20 121 190 2.9E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Gene3D G3DSA:3.90.600.10 330 429 1.2E-34 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 SUPERFAMILY SSF56059 104 320 4.95E-68 T 11-10-2018 AL538_08590 1928749e2c542304b39cfcb15506a520 429 SMART SM01210 330 423 6.7E-54 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Gene3D G3DSA:3.40.50.20 2 95 5.0E-38 T 11-10-2018 AL538_08590 1928749e2c542304b39cfcb15506a520 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Gene3D G3DSA:3.30.470.20 191 329 3.8E-62 T 11-10-2018 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 8.8E-29 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.6E-186 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.4E-83 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_08590 1928749e2c542304b39cfcb15506a520 429 SUPERFAMILY SSF52440 1 103 1.15E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_08590 1928749e2c542304b39cfcb15506a520 429 SUPERFAMILY SSF51246 329 424 3.3E-33 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL538_08590 1928749e2c542304b39cfcb15506a520 429 SMART SM01209 103 296 1.5E-142 T 11-10-2018 AL538_08590 1928749e2c542304b39cfcb15506a520 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.215 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_15120 78dc82fa3de786db8ddabf7f0541d8ed 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 8.9E-19 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_15120 78dc82fa3de786db8ddabf7f0541d8ed 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 7.7E-45 T 11-10-2018 IPR013353 Type III secretion system chaperone YscB AL538_15120 78dc82fa3de786db8ddabf7f0541d8ed 142 Gene3D G3DSA:3.30.1460.10 2 128 1.7E-27 T 11-10-2018 AL538_15120 78dc82fa3de786db8ddabf7f0541d8ed 142 SUPERFAMILY SSF69635 3 128 2.51E-50 T 11-10-2018 AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 Gene3D G3DSA:3.40.190.10 32 249 1.2E-61 T 11-10-2018 AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 SMART SM00062 39 262 1.1E-46 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 Gene3D G3DSA:3.40.190.10 125 216 1.2E-61 T 11-10-2018 AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 SUPERFAMILY SSF53850 9 259 7.61E-59 T 11-10-2018 AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 SMART SM00079 39 261 0.0024 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL538_23965 f438ccc28cd4da3b676f882843d65b72 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 1.6E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_05095 6e336d138dc2d46c744f85df930fd5a5 147 Pfam PF02050 Flagellar FliJ protein 17 140 6.9E-29 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL538_05095 6e336d138dc2d46c744f85df930fd5a5 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 7.2E-36 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL538_24425 f724d07c1ebd4900672ed8e3c18731ba 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 420 8.9E-54 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24425 f724d07c1ebd4900672ed8e3c18731ba 461 Pfam PF01554 MatE 22 181 8.4E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24425 f724d07c1ebd4900672ed8e3c18731ba 461 Pfam PF01554 MatE 249 411 5.3E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24425 f724d07c1ebd4900672ed8e3c18731ba 461 PIRSF PIRSF006603 2 460 7.4E-70 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 SUPERFAMILY SSF82689 187 284 9.55E-36 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 Pfam PF00924 Mechanosensitive ion channel 77 274 6.5E-59 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 11-10-2018 IPR010920 LSM domain superfamily AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 SUPERFAMILY SSF82861 33 118 1.28E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 Pfam PF05552 Conserved TM helix 21 69 1.9E-13 T 11-10-2018 IPR008910 Conserved TM helix AL538_06920 c21932b32a02ad2988e45c02bb00bfca 288 Gene3D G3DSA:3.30.70.100 185 279 2.1E-29 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.098 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:1.10.290.10 287 411 2.6E-160 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 4.8E-5 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SUPERFAMILY SSF56712 3 615 2.22E-197 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:1.10.460.10 172 577 2.6E-160 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 1.2E-17 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 7.2E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SMART SM00436 140 228 2.0E-46 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:2.70.20.10 220 479 2.6E-160 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:2.20.25.10 813 870 6.8E-26 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 1.6E-247 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SUPERFAMILY SSF57783 814 870 2.55E-20 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SMART SM00493 3 139 8.2E-35 T 11-10-2018 IPR006171 TOPRIM domain AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:3.40.50.140 1 170 2.9E-66 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF01751 Toprim domain 5 149 1.2E-32 T 11-10-2018 IPR006171 TOPRIM domain AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:3.30.65.10 750 812 4.2E-32 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Gene3D G3DSA:3.30.65.10 703 749 2.8E-6 T 11-10-2018 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SMART SM00437 279 533 1.2E-117 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 Pfam PF01131 DNA topoisomerase 164 571 9.8E-126 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_14790 fb4e35865ae5411909c2177c2b089df0 876 SUPERFAMILY SSF57783 705 747 2.21E-5 T 11-10-2018 AL538_17960 e8594b8f3a2af5ffabfcc11ca4632008 414 SUPERFAMILY SSF51556 60 385 7.48E-46 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_17960 e8594b8f3a2af5ffabfcc11ca4632008 414 Gene3D G3DSA:3.20.20.140 38 386 8.3E-60 T 11-10-2018 AL538_17960 e8594b8f3a2af5ffabfcc11ca4632008 414 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 57 382 5.5E-44 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 Gene3D G3DSA:1.20.1530.20 4 384 5.5E-82 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL538_07955 9d2056e80d5137be8ca53691779b0684 598 Pfam PF02254 TrkA-N domain 402 512 5.0E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 5.4E-81 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 Gene3D G3DSA:3.40.50.720 399 559 3.0E-36 T 11-10-2018 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.736 T 11-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 9.3E-69 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL538_07955 9d2056e80d5137be8ca53691779b0684 598 SUPERFAMILY SSF51735 401 529 1.44E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05965 5d555a25b16e38d936c69d06b082539d 324 Pfam PF00482 Type II secretion system (T2SS), protein F 178 306 2.0E-22 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_05965 5d555a25b16e38d936c69d06b082539d 324 Gene3D G3DSA:1.20.81.30 167 284 6.5E-6 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:1.10.132.60 643 787 4.3E-61 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:3.90.1600.30 516 637 2.8E-7 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:3.30.70.2250 41 108 3.5E-40 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:3.90.1600.10 348 454 9.8E-29 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 SUPERFAMILY SSF53098 4 389 2.22E-86 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 71 296 6.5E-18 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:1.10.287.690 468 514 5.6E-25 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:3.30.420.10 156 347 1.2E-70 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 SMART SM00486 153 558 1.2E-67 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Pfam PF00136 DNA polymerase family B 377 742 7.8E-42 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 Gene3D G3DSA:2.40.50.590 6 153 3.5E-40 T 11-10-2018 AL538_03325 5cc026fff94d2458f0e8c384a30ea233 787 SUPERFAMILY SSF56672 385 780 5.23E-116 T 11-10-2018 AL538_25600 ec300f9a27b517e7f9930bb7f547486d 303 SUPERFAMILY SSF103481 41 140 6.28E-10 T 11-10-2018 AL538_25600 ec300f9a27b517e7f9930bb7f547486d 303 Pfam PF00892 EamA-like transporter family 153 286 1.3E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_25600 ec300f9a27b517e7f9930bb7f547486d 303 Pfam PF00892 EamA-like transporter family 7 139 5.6E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_26000 bca76c340cad3051c2efd22b7f63337b 423 SMART SM00382 195 349 0.004 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26000 bca76c340cad3051c2efd22b7f63337b 423 Gene3D G3DSA:3.30.450.380 1 166 4.3E-41 T 11-10-2018 AL538_26000 bca76c340cad3051c2efd22b7f63337b 423 SUPERFAMILY SSF52540 56 374 4.35E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26000 bca76c340cad3051c2efd22b7f63337b 423 Gene3D G3DSA:3.40.50.300 168 417 1.7E-73 T 11-10-2018 AL538_26000 bca76c340cad3051c2efd22b7f63337b 423 Pfam PF00437 Type II/IV secretion system protein 71 347 7.3E-80 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_19765 b7925a00e5f2ec307ffc988aeb7ca5bd 325 Gene3D G3DSA:3.40.1190.20 1 320 2.2E-75 T 11-10-2018 IPR029056 Ribokinase-like AL538_19765 b7925a00e5f2ec307ffc988aeb7ca5bd 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_19765 b7925a00e5f2ec307ffc988aeb7ca5bd 325 SUPERFAMILY SSF53613 1 314 3.43E-67 T 11-10-2018 IPR029056 Ribokinase-like AL538_19765 b7925a00e5f2ec307ffc988aeb7ca5bd 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 4.6E-61 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_02585 b80a0c960fb5f082a7a4784eeb769ea9 162 SUPERFAMILY SSF56784 3 156 5.51E-28 T 11-10-2018 IPR036412 HAD-like superfamily AL538_02585 b80a0c960fb5f082a7a4784eeb769ea9 162 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 154 1.7E-17 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL538_02585 b80a0c960fb5f082a7a4784eeb769ea9 162 Pfam PF13242 HAD-hyrolase-like 107 153 6.1E-7 T 11-10-2018 AL538_02585 b80a0c960fb5f082a7a4784eeb769ea9 162 Gene3D G3DSA:3.40.50.1000 2 159 1.4E-31 T 11-10-2018 IPR023214 HAD superfamily AL538_18140 bb72bf9b7ff5b36f6910f577db9b98f5 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL538_18140 bb72bf9b7ff5b36f6910f577db9b98f5 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL538_18140 bb72bf9b7ff5b36f6910f577db9b98f5 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AL538_18140 bb72bf9b7ff5b36f6910f577db9b98f5 431 Pfam PF00561 alpha/beta hydrolase fold 50 271 8.5E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_18140 bb72bf9b7ff5b36f6910f577db9b98f5 431 SUPERFAMILY SSF53474 41 419 8.18E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_12820 d8417136a46bed77806483ec21156dd0 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.917 T 11-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 AL538_12820 d8417136a46bed77806483ec21156dd0 154 SUPERFAMILY SSF53271 5 146 2.98E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_12820 d8417136a46bed77806483ec21156dd0 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 6.2E-13 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL538_12820 d8417136a46bed77806483ec21156dd0 154 Gene3D G3DSA:3.40.50.2020 1 152 7.8E-41 T 11-10-2018 AL538_18960 9c680cc4e57d9b1fa0885c1e3c62a741 385 Gene3D G3DSA:3.40.50.10490 204 377 8.0E-55 T 11-10-2018 AL538_18960 9c680cc4e57d9b1fa0885c1e3c62a741 385 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 383 3.8E-174 T 11-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 AL538_18960 9c680cc4e57d9b1fa0885c1e3c62a741 385 Gene3D G3DSA:3.40.50.10490 5 199 2.0E-56 T 11-10-2018 AL538_18960 9c680cc4e57d9b1fa0885c1e3c62a741 385 SUPERFAMILY SSF53697 20 374 2.65E-48 T 11-10-2018 AL538_18960 9c680cc4e57d9b1fa0885c1e3c62a741 385 Pfam PF01380 SIS domain 55 191 4.6E-15 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Gene3D G3DSA:3.30.450.20 57 173 2.0E-40 T 11-10-2018 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 SUPERFAMILY SSF55874 440 592 3.41E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Pfam PF02743 Cache domain 38 219 3.0E-14 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 SMART SM00388 372 440 2.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 SUPERFAMILY SSF47384 367 440 1.35E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Gene3D G3DSA:3.30.450.20 27 56 6.8E-7 T 11-10-2018 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Gene3D G3DSA:3.30.450.20 174 283 1.1E-27 T 11-10-2018 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 440 6.0E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 SUPERFAMILY SSF103190 48 187 1.59E-30 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Gene3D G3DSA:3.30.565.10 441 596 2.0E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 SMART SM00387 483 593 1.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 PIRSF PIRSF036431 1 597 1.8E-188 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Gene3D G3DSA:1.10.287.130 348 435 2.8E-19 T 11-10-2018 AL538_14240 4787c3b9ffd726d874e10e6ab9c3ffe2 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 591 6.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:1.10.150.300 120 200 2.4E-150 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.081 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.1E-169 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:3.40.50.300 4 278 2.4E-150 T 11-10-2018 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 PIRSF PIRSF006641 1 363 1.0E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 SUPERFAMILY SSF52540 3 301 3.69E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 SUPERFAMILY SSF81271 279 363 5.01E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Pfam PF01926 50S ribosome-binding GTPase 5 121 1.2E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.2E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AL538_13240 f4f2fc8fa81badc339c781b60944e8a6 363 Gene3D G3DSA:3.10.20.30 48 362 2.4E-150 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_15280 fd4e9031d24515a609fb121411599878 96 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 96 4.5E-35 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AL538_15280 fd4e9031d24515a609fb121411599878 96 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 96 2.0E-34 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AL538_15280 fd4e9031d24515a609fb121411599878 96 Pfam PF07216 LcrG protein 1 96 6.6E-35 T 11-10-2018 IPR009863 Type III secretion protein, LcrG AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 SUPERFAMILY SSF48019 253 435 6.23E-73 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Gene3D G3DSA:1.10.3710.10 347 448 1.3E-36 T 11-10-2018 AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 4.8E-67 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 SMART SM00382 50 166 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 SUPERFAMILY SSF52540 11 236 8.16E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Gene3D G3DSA:1.20.272.10 242 346 1.9E-43 T 11-10-2018 AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Pfam PF16193 AAA C-terminal domain 190 268 1.6E-21 T 11-10-2018 IPR032423 AAA C-terminal domain AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Gene3D G3DSA:1.10.8.60 166 241 9.4E-24 T 11-10-2018 AL538_15665 a852af90305d12aab2cb9992a95ca88e 449 Gene3D G3DSA:3.40.50.300 3 165 1.4E-48 T 11-10-2018 AL538_26665 b792f6ab8be499e71b211d2741345891 470 SUPERFAMILY SSF56954 4 455 4.32E-51 T 11-10-2018 AL538_26665 b792f6ab8be499e71b211d2741345891 470 Pfam PF02321 Outer membrane efflux protein 55 237 1.6E-5 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_26665 b792f6ab8be499e71b211d2741345891 470 Pfam PF02321 Outer membrane efflux protein 274 453 6.8E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_26665 b792f6ab8be499e71b211d2741345891 470 Gene3D G3DSA:1.20.1600.10 48 455 2.7E-41 T 11-10-2018 AL538_10245 187aaa6ff886dc70f375acba6f9d2c19 128 Gene3D G3DSA:3.10.290.10 2 107 1.6E-36 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_10245 187aaa6ff886dc70f375acba6f9d2c19 128 SMART SM00363 8 71 1.4E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10245 187aaa6ff886dc70f375acba6f9d2c19 128 SUPERFAMILY SSF55174 8 105 2.49E-30 T 11-10-2018 AL538_10245 187aaa6ff886dc70f375acba6f9d2c19 128 PIRSF PIRSF016821 5 128 8.0E-43 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AL538_10245 187aaa6ff886dc70f375acba6f9d2c19 128 Pfam PF01479 S4 domain 8 54 4.0E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 Gene3D G3DSA:3.40.50.150 192 478 9.8E-88 T 11-10-2018 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 SUPERFAMILY SSF53335 7 519 1.66E-130 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 194 210 1.5E-23 T 11-10-2018 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 1.5E-23 T 11-10-2018 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 330 354 1.5E-23 T 11-10-2018 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 224 238 1.5E-23 T 11-10-2018 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 503 8.2E-132 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 Pfam PF02384 N-6 DNA Methylase 170 484 1.2E-109 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 Gene3D G3DSA:1.20.1260.30 1 188 6.1E-59 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 297 303 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_13980 a91789d1dfc8efa7fb68172d0bcb313b 522 Pfam PF12161 HsdM N-terminal domain 9 156 7.1E-22 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 SUPERFAMILY SSF58104 388 697 4.19E-71 T 11-10-2018 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 Gene3D G3DSA:3.30.450.20 67 322 5.2E-26 T 11-10-2018 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 5.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 5.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 5.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 SMART SM00283 435 696 4.1E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 SMART SM00304 366 420 2.3E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 Gene3D G3DSA:1.10.287.950 366 698 1.8E-65 T 11-10-2018 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 Gene3D G3DSA:3.30.450.20 76 226 5.2E-26 T 11-10-2018 AL538_03490 09ba6c21e2598012feec4b28324a0eec 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 504 661 2.7E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 Gene3D G3DSA:2.40.30.170 55 296 4.3E-75 T 11-10-2018 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 287 4.8E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 366 1.0E-71 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 Gene3D G3DSA:1.10.287.470 102 175 4.3E-75 T 11-10-2018 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 Gene3D G3DSA:2.40.420.20 297 364 4.3E-75 T 11-10-2018 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 Gene3D G3DSA:2.40.50.100 67 211 4.3E-75 T 11-10-2018 AL538_01745 ce34b8eeb5c9122587431f8a2d02db05 379 SUPERFAMILY SSF111369 56 294 1.27E-55 T 11-10-2018 AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 217 407 5.6E-52 T 11-10-2018 AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00490 260 341 1.8E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 SUPERFAMILY SSF52540 76 358 1.26E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 SMART SM00487 22 222 2.7E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 Gene3D G3DSA:3.40.50.300 1 211 7.3E-70 T 11-10-2018 AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.8 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.7E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_11870 baef0f1da88df0f0695bc0e5a978d44b 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 7.7E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.0E-133 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 Gene3D G3DSA:2.40.10.240 64 163 1.8E-117 T 11-10-2018 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 Gene3D G3DSA:3.40.1780.10 14 345 1.8E-117 T 11-10-2018 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.198 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 2.8E-159 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL538_12300 d4d98dd96097decf3b9b2bdd86f1bda3 350 SUPERFAMILY SSF111337 1 345 2.35E-138 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 Pfam PF01235 Sodium:alanine symporter family 51 472 1.1E-148 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 4.5E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12470 8add8b2415f4d436e42899894c0a45f2 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 7.0E-135 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_06125 522e680410a41bedf5737ac90131118b 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 5.9E-8 T 11-10-2018 IPR000014 PAS domain AL538_06125 522e680410a41bedf5737ac90131118b 679 SMART SM00091 131 198 0.011 T 11-10-2018 IPR000014 PAS domain AL538_06125 522e680410a41bedf5737ac90131118b 679 SMART SM00091 8 74 0.012 T 11-10-2018 IPR000014 PAS domain AL538_06125 522e680410a41bedf5737ac90131118b 679 Gene3D G3DSA:3.30.450.20 129 239 1.9E-7 T 11-10-2018 AL538_06125 522e680410a41bedf5737ac90131118b 679 Gene3D G3DSA:3.30.70.270 248 416 6.4E-50 T 11-10-2018 AL538_06125 522e680410a41bedf5737ac90131118b 679 SUPERFAMILY SSF55785 118 204 2.09E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL538_06125 522e680410a41bedf5737ac90131118b 679 SMART SM00052 420 666 3.6E-104 T 11-10-2018 IPR001633 EAL domain AL538_06125 522e680410a41bedf5737ac90131118b 679 Pfam PF13188 PAS domain 133 177 5.6E-5 T 11-10-2018 IPR000014 PAS domain AL538_06125 522e680410a41bedf5737ac90131118b 679 Gene3D G3DSA:3.20.20.450 421 676 2.4E-94 T 11-10-2018 IPR035919 EAL domain superfamily AL538_06125 522e680410a41bedf5737ac90131118b 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 4.6E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_06125 522e680410a41bedf5737ac90131118b 679 SUPERFAMILY SSF55073 258 412 9.42E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_06125 522e680410a41bedf5737ac90131118b 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 407 1.9E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_06125 522e680410a41bedf5737ac90131118b 679 Pfam PF08448 PAS fold 15 119 1.4E-7 T 11-10-2018 IPR013656 PAS fold-4 AL538_06125 522e680410a41bedf5737ac90131118b 679 SUPERFAMILY SSF55785 5 115 7.78E-10 T 11-10-2018 IPR035965 PAS domain superfamily AL538_06125 522e680410a41bedf5737ac90131118b 679 SMART SM00267 242 410 5.9E-55 T 11-10-2018 IPR000160 GGDEF domain AL538_06125 522e680410a41bedf5737ac90131118b 679 Gene3D G3DSA:3.30.450.20 3 128 2.7E-12 T 11-10-2018 AL538_06125 522e680410a41bedf5737ac90131118b 679 Pfam PF00563 EAL domain 427 661 2.8E-72 T 11-10-2018 IPR001633 EAL domain AL538_06125 522e680410a41bedf5737ac90131118b 679 SUPERFAMILY SSF141868 427 674 4.18E-84 T 11-10-2018 IPR035919 EAL domain superfamily AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 Gene3D G3DSA:3.40.1190.20 10 320 1.4E-97 T 11-10-2018 IPR029056 Ribokinase-like AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 14 317 1.1E-103 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 PIRSF PIRSF000535 11 320 1.6E-97 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 48 72 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 Pfam PF00294 pfkB family carbohydrate kinase 30 303 3.6E-53 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 14 317 4.0E-104 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AL538_23930 4ef980844e817b6f1ab29af88ffaa45c 329 SUPERFAMILY SSF53613 15 302 2.65E-70 T 11-10-2018 IPR029056 Ribokinase-like AL538_13250 c999992c563a2fe8be574b1937a179a1 314 SUPERFAMILY SSF53271 69 306 3.6E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_13250 c999992c563a2fe8be574b1937a179a1 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 Gene3D G3DSA:3.40.50.2020 7 302 7.4E-136 T 11-10-2018 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.8E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 SMART SM01400 4 121 2.0E-77 T 11-10-2018 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.826 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 Gene3D G3DSA:3.40.50.2020 148 290 7.4E-136 T 11-10-2018 AL538_13250 c999992c563a2fe8be574b1937a179a1 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.7E-125 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 255 1.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 SUPERFAMILY SSF46894 191 260 3.06E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 SMART SM00421 198 255 6.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 Gene3D G3DSA:1.10.10.10 189 261 3.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 4.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 4.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03015 3066a6e79acba14ad45b4eee619b7408 262 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 4.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19250 4a7f123ca9288e00fa07eef29997dee9 408 Pfam PF03616 Sodium/glutamate symporter 9 376 2.4E-152 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_19250 4a7f123ca9288e00fa07eef29997dee9 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.811 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_19250 4a7f123ca9288e00fa07eef29997dee9 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 4.4E-137 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 5.2E-83 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 Gene3D G3DSA:3.40.50.720 374 661 3.5E-108 T 11-10-2018 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 SUPERFAMILY SSF51971 373 622 4.24E-41 T 11-10-2018 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 SUPERFAMILY SSF51395 2 361 1.64E-108 T 11-10-2018 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 Gene3D G3DSA:3.20.20.70 1 367 1.4E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 Gene3D G3DSA:3.50.50.60 468 620 3.5E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 627 1.2E-24 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.5E-9 T 11-10-2018 AL538_04630 b722d64a11da4b83299bc5fde4fc502e 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.5E-9 T 11-10-2018 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 PIRSF PIRSF000412 1 416 7.2E-170 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 Gene3D G3DSA:3.90.1150.10 10 396 2.7E-187 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 SUPERFAMILY SSF53383 6 415 2.89E-185 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 Gene3D G3DSA:3.40.640.10 37 288 2.7E-187 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 8.1E-184 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_13035 cbda74d1abc784d103600fcb46eceae2 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.642 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AL538_24540 c14892eb11fed30742ec554165d8a902 420 SUPERFAMILY SSF56542 27 409 1.23E-79 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 50 419 1.4E-114 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 Gene3D G3DSA:3.30.70.420 146 261 1.8E-112 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 11-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 Gene3D G3DSA:3.90.770.10 92 405 1.8E-112 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 1.9E-39 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_24540 c14892eb11fed30742ec554165d8a902 420 SUPERFAMILY SSF55035 146 261 4.97E-36 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 SUPERFAMILY SSF102114 139 279 8.44E-16 T 11-10-2018 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 302 2.9E-94 T 11-10-2018 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 Pfam PF04055 Radical SAM superfamily 20 251 1.9E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 Pfam PF13353 4Fe-4S single cluster domain 12 167 2.4E-11 T 11-10-2018 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 PIRSF PIRSF000371 1 313 1.4E-112 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 Gene3D G3DSA:3.20.20.70 1 76 1.3E-13 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 Gene3D G3DSA:3.20.20.70 103 309 2.0E-56 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17970 41f811412e820dd0e3fa5325e680ad9a 313 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 SUPERFAMILY SSF52402 5 253 2.65E-56 T 11-10-2018 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 Gene3D G3DSA:2.40.30.10 293 378 8.2E-34 T 11-10-2018 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 372 39.781 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 371 3.4E-150 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 Gene3D G3DSA:3.40.50.620 1 220 3.5E-94 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 Gene3D G3DSA:2.30.30.280 222 292 6.6E-25 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AL538_15770 1120767d2f97dc095e7dc0a7f028cee9 380 Pfam PF03054 tRNA methyl transferase 7 371 7.6E-141 T 11-10-2018 AL538_00875 9e58882d69732295da57fb6046c2620e 868 SUPERFAMILY SSF55486 203 449 2.05E-74 T 11-10-2018 AL538_00875 9e58882d69732295da57fb6046c2620e 868 Gene3D G3DSA:1.25.50.10 545 867 8.9E-116 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AL538_00875 9e58882d69732295da57fb6046c2620e 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 8.4E-33 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AL538_00875 9e58882d69732295da57fb6046c2620e 868 Pfam PF01433 Peptidase family M1 domain 207 435 3.9E-57 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 Gene3D G3DSA:1.10.390.10 279 442 1.3E-64 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AL538_00875 9e58882d69732295da57fb6046c2620e 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 SUPERFAMILY SSF63737 2 192 3.4E-47 T 11-10-2018 AL538_00875 9e58882d69732295da57fb6046c2620e 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 3.2E-114 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL538_00875 9e58882d69732295da57fb6046c2620e 868 Gene3D G3DSA:2.60.40.1730 15 193 1.5E-70 T 11-10-2018 AL538_00875 9e58882d69732295da57fb6046c2620e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AL538_00875 9e58882d69732295da57fb6046c2620e 868 Gene3D G3DSA:2.60.40.1840 443 544 5.2E-35 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AL538_00875 9e58882d69732295da57fb6046c2620e 868 Gene3D G3DSA:1.10.1740.60 194 278 7.4E-40 T 11-10-2018 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.6E-23 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Gene3D G3DSA:3.40.50.1970 451 642 2.9E-58 T 11-10-2018 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 PIRSF PIRSF000111 1 865 0.0 T 11-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 SUPERFAMILY SSF53720 6 454 2.62E-82 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Gene3D G3DSA:1.20.1090.10 643 864 1.7E-60 T 11-10-2018 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 848 6.5E-114 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Gene3D G3DSA:3.40.309.10 218 405 8.6E-177 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 Gene3D G3DSA:3.40.605.10 12 446 8.6E-177 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 SUPERFAMILY SSF56796 452 863 5.5E-116 T 11-10-2018 AL538_04550 fcbf920e17fa99e4a847dc89dff69c32 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_11075 a09c11bc8711c61b09a805f0c92db4cd 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 7.0E-25 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AL538_11075 a09c11bc8711c61b09a805f0c92db4cd 115 SUPERFAMILY SSF110857 3 114 1.27E-33 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily AL538_11075 a09c11bc8711c61b09a805f0c92db4cd 115 Gene3D G3DSA:3.10.490.10 4 115 9.1E-39 T 11-10-2018 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 Gene3D G3DSA:3.40.190.10 45 353 9.3E-126 T 11-10-2018 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 Gene3D G3DSA:3.40.190.10 134 384 9.3E-126 T 11-10-2018 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 Pfam PF13416 Bacterial extracellular solute-binding protein 47 326 1.7E-45 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_19940 90376d4e075aad34801f65375c05c2f5 392 SUPERFAMILY SSF53850 23 390 1.24E-90 T 11-10-2018 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 126 145 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 295 316 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 353 372 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 167 186 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 229 248 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 147 166 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 66 84 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_19940 90376d4e075aad34801f65375c05c2f5 392 PRINTS PR00181 Maltose binding protein signature 32 50 2.2E-59 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_21785 a40f2ceb960b9da30a85fca2dabd28f5 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.483 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL538_21785 a40f2ceb960b9da30a85fca2dabd28f5 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 7.3E-74 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 449 3.6E-14 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 Gene3D G3DSA:3.40.50.10890 212 400 1.6E-138 T 11-10-2018 AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 Gene3D G3DSA:3.60.15.10 14 435 1.6E-138 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 SUPERFAMILY SSF56281 6 443 1.83E-122 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 SMART SM00849 21 226 3.6E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 SMART SM01027 244 374 3.3E-58 T 11-10-2018 IPR022712 Beta-Casp domain AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 Pfam PF00753 Metallo-beta-lactamase superfamily 28 116 9.0E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_10740 e5b7af93c1a3e9c6b0fc24f4e41eb85a 449 Pfam PF10996 Beta-Casp domain 244 374 5.0E-30 T 11-10-2018 IPR022712 Beta-Casp domain AL538_00670 8b6f1d512cbb80e9a5de2380dee8ae5c 350 Gene3D G3DSA:1.20.950.20 118 336 2.2E-65 T 11-10-2018 AL538_00670 8b6f1d512cbb80e9a5de2380dee8ae5c 350 SUPERFAMILY SSF81342 119 333 6.83E-46 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_00670 8b6f1d512cbb80e9a5de2380dee8ae5c 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 4.1E-25 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL538_00670 8b6f1d512cbb80e9a5de2380dee8ae5c 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 1.2E-83 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AL538_11950 bdca367f5398ad4eaf031253d7dc0da3 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 2.3E-51 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 Pfam PF13522 Glutamine amidotransferase domain 63 206 2.5E-17 T 11-10-2018 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 SUPERFAMILY SSF56235 2 256 1.63E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.808 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 PIRSF PIRSF000485 1 479 6.6E-168 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 Gene3D G3DSA:3.40.50.2020 276 440 2.1E-157 T 11-10-2018 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 Gene3D G3DSA:3.60.20.10 2 411 2.1E-157 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.4E-165 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AL538_04805 632ccb36a170f9b7da9a5b2222226651 504 SUPERFAMILY SSF53271 249 482 1.7E-68 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_03955 773c4f075f977195fc29063bab096afe 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 6.6E-7 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 AL538_03955 773c4f075f977195fc29063bab096afe 201 Gene3D G3DSA:3.40.50.300 11 201 3.7E-70 T 11-10-2018 AL538_03955 773c4f075f977195fc29063bab096afe 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 5.6E-58 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL538_03955 773c4f075f977195fc29063bab096afe 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 6.6E-69 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL538_03955 773c4f075f977195fc29063bab096afe 201 PIRSF PIRSF015617 6 201 1.3E-65 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 AL538_03955 773c4f075f977195fc29063bab096afe 201 SUPERFAMILY SSF52540 12 201 7.97E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01845 6a23949a492de1d861e0be3cba69b2eb 75 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL538_01845 6a23949a492de1d861e0be3cba69b2eb 75 SUPERFAMILY SSF52833 3 68 5.81E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_01845 6a23949a492de1d861e0be3cba69b2eb 75 Gene3D G3DSA:3.40.30.10 2 75 3.3E-16 T 11-10-2018 AL538_01845 6a23949a492de1d861e0be3cba69b2eb 75 Pfam PF00462 Glutaredoxin 4 60 6.0E-12 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 SUPERFAMILY SSF53790 12 232 4.97E-86 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 Gene3D G3DSA:3.30.950.10 121 241 7.5E-45 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.2E-103 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.707 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 PIRSF PIRSF005917 1 286 1.1E-108 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 Gene3D G3DSA:3.40.1010.10 2 120 5.7E-48 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL538_11590 2e6a6256a48b91e11ae98cbb11ea7ad1 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-29 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL538_24245 81ca358b2219456a69177b25980f7c98 338 SUPERFAMILY SSF51735 1 335 1.12E-100 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_24245 81ca358b2219456a69177b25980f7c98 338 Gene3D G3DSA:3.90.25.10 193 328 3.0E-142 T 11-10-2018 AL538_24245 81ca358b2219456a69177b25980f7c98 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 1.9E-62 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_24245 81ca358b2219456a69177b25980f7c98 338 Gene3D G3DSA:3.40.50.720 3 273 3.0E-142 T 11-10-2018 AL538_24245 81ca358b2219456a69177b25980f7c98 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 2.0E-5 T 11-10-2018 AL538_24245 81ca358b2219456a69177b25980f7c98 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 2.0E-5 T 11-10-2018 AL538_24245 81ca358b2219456a69177b25980f7c98 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 2.0E-5 T 11-10-2018 AL538_24245 81ca358b2219456a69177b25980f7c98 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 3.4E-142 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 11-10-2018 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Pfam PF11638 DnaA N-terminal domain 4 65 6.3E-20 T 11-10-2018 IPR024633 DnaA N-terminal domain AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 SUPERFAMILY SSF52540 133 344 2.43E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 SMART SM00760 376 445 3.4E-45 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Gene3D G3DSA:3.40.50.300 119 297 4.7E-49 T 11-10-2018 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 5.1E-187 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.2E-97 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 SMART SM00382 165 378 4.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Gene3D G3DSA:3.30.300.180 2 114 7.6E-42 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL538_09690 b36d1bef2c83ff7e58b7530c1f484b61 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.468 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.0E-48 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.988 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 SUPERFAMILY SSF52440 2 122 2.27E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Gene3D G3DSA:3.30.470.20 197 300 1.3E-40 T 11-10-2018 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.2E-140 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 Gene3D G3DSA:3.40.50.20 1 129 7.2E-53 T 11-10-2018 AL538_06975 88165068c737b9e284baa2a84698e1a5 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 11-10-2018 AL538_07010 b291c9bb14c9fe4e762b51e25bc35a7e 185 Pfam PF02325 YGGT family 109 173 9.8E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AL538_07010 b291c9bb14c9fe4e762b51e25bc35a7e 185 Pfam PF02325 YGGT family 10 77 1.5E-19 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SUPERFAMILY SSF54631 65 206 1.22E-33 T 11-10-2018 AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Gene3D G3DSA:3.30.465.10 204 296 4.6E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF00571 CBS domain 75 132 1.7E-8 T 11-10-2018 IPR000644 CBS domain AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 11-10-2018 IPR000644 CBS domain AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Gene3D G3DSA:3.10.580.10 57 203 1.8E-54 T 11-10-2018 AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SUPERFAMILY SSF56176 209 291 1.72E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM00116 84 133 0.0024 T 11-10-2018 IPR000644 CBS domain AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM00116 147 195 0.028 T 11-10-2018 IPR000644 CBS domain AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 Pfam PF03471 Transporter associated domain 212 287 4.2E-22 T 11-10-2018 IPR005170 Transporter-associated domain AL538_13110 a1cf39cdd74c67ed3e9f533e77ad1e47 299 SMART SM01091 211 289 1.7E-29 T 11-10-2018 IPR005170 Transporter-associated domain AL538_17620 4a53d2759641213aed0f3b26821dd4f8 241 SUPERFAMILY SSF55811 16 159 2.38E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_17620 4a53d2759641213aed0f3b26821dd4f8 241 Gene3D G3DSA:3.90.79.10 3 161 8.8E-27 T 11-10-2018 AL538_17620 4a53d2759641213aed0f3b26821dd4f8 241 Pfam PF00293 NUDIX domain 19 149 9.3E-9 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 SUPERFAMILY SSF51055 458 507 1.16E-6 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 Gene3D G3DSA:2.10.10.20 459 507 2.6E-8 T 11-10-2018 AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 40 224 3.6E-36 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 SMART SM00495 460 509 1.5E-4 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 SUPERFAMILY SSF81296 40 226 8.82E-47 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_01495 b580b7cb8a7a35dfc100cdd45be5308f 510 Gene3D G3DSA:2.70.50.50 40 229 4.5E-59 T 11-10-2018 AL538_17135 0cc002885cc2e75f58c6c052ce352ede 374 Gene3D G3DSA:3.40.50.2000 202 350 2.0E-30 T 11-10-2018 AL538_17135 0cc002885cc2e75f58c6c052ce352ede 374 Pfam PF13692 Glycosyl transferases group 1 216 344 4.8E-8 T 11-10-2018 AL538_17135 0cc002885cc2e75f58c6c052ce352ede 374 SUPERFAMILY SSF53756 11 372 2.04E-21 T 11-10-2018 AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 229 240 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 TIGRFAM TIGR02910 sulfite_red_A: sulfite reductase, subunit A 5 341 1.8E-143 T 11-10-2018 IPR014259 Sulphite reductase, subunit A AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 Gene3D G3DSA:1.10.1060.10 288 339 2.4E-5 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 311 322 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 Pfam PF17179 4Fe-4S dicluster domain 228 325 4.0E-30 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_20140 e8bd65ad67af434da69014f69645a5a0 342 SUPERFAMILY SSF46548 209 339 3.4E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_23785 ade085ecdc3a4a622fd278ac97a2975c 112 Pfam PF01638 HxlR-like helix-turn-helix 23 109 9.4E-18 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AL538_23785 ade085ecdc3a4a622fd278ac97a2975c 112 Gene3D G3DSA:1.10.10.10 11 112 8.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23785 ade085ecdc3a4a622fd278ac97a2975c 112 SUPERFAMILY SSF46785 14 109 2.11E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 SUPERFAMILY SSF81296 28 110 6.16E-12 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Gene3D G3DSA:2.60.40.10 13 227 2.9E-51 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Pfam PF00128 Alpha amylase, catalytic domain 282 356 1.2E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 SUPERFAMILY SSF51445 252 627 1.17E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 98 733 41.071 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 SUPERFAMILY SSF81296 123 233 5.42E-25 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 635 732 8.2E-18 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 SUPERFAMILY SSF51011 630 732 6.93E-29 T 11-10-2018 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 SMART SM00642 257 611 6.3E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 123 730 8.8E-245 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 PIRSF PIRSF000463 16 734 6.0E-281 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Gene3D G3DSA:2.60.40.1180 630 733 6.6E-31 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Gene3D G3DSA:3.20.20.80 231 629 5.1E-159 T 11-10-2018 AL538_18325 2187e3b9fd31b10fe49ee31b2c6ccb13 734 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 143 213 1.3E-18 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL538_12795 1226e30dae833f061ac02062a4e74093 728 Pfam PF00593 TonB dependent receptor 256 727 5.4E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_12795 1226e30dae833f061ac02062a4e74093 728 Gene3D G3DSA:2.170.130.10 45 160 1.8E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_12795 1226e30dae833f061ac02062a4e74093 728 SUPERFAMILY SSF56935 32 728 9.16E-83 T 11-10-2018 AL538_12795 1226e30dae833f061ac02062a4e74093 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 142 1.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_12795 1226e30dae833f061ac02062a4e74093 728 Gene3D G3DSA:2.40.170.20 161 727 3.0E-80 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 5.2E-72 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 4.8E-34 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 SUPERFAMILY SSF53613 6 260 1.26E-60 T 11-10-2018 IPR029056 Ribokinase-like AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.035 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 PIRSF PIRSF000513 4 263 1.7E-98 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20280 5a584a2ee99a169b5d8d376d5624db70 263 Gene3D G3DSA:3.40.1190.20 1 263 2.0E-90 T 11-10-2018 IPR029056 Ribokinase-like AL538_15070 a3000e27f11f7fbee70041ad29996871 388 SUPERFAMILY SSF52440 174 280 3.16E-42 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_15070 a3000e27f11f7fbee70041ad29996871 388 Gene3D G3DSA:3.30.1490.330 264 345 2.4E-26 T 11-10-2018 AL538_15070 a3000e27f11f7fbee70041ad29996871 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.3E-159 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AL538_15070 a3000e27f11f7fbee70041ad29996871 388 SUPERFAMILY SSF56059 1 385 5.74E-86 T 11-10-2018 AL538_00130 28647ad7219a4a503bb4b8357c484d0f 236 SUPERFAMILY SSF49354 19 147 1.13E-5 T 11-10-2018 IPR008962 PapD-like superfamily AL538_00130 28647ad7219a4a503bb4b8357c484d0f 236 Gene3D G3DSA:2.60.40.10 20 150 2.4E-36 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 Pfam PF00664 ABC transporter transmembrane region 24 291 4.2E-43 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 Gene3D G3DSA:1.20.1560.10 1 324 6.0E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 Pfam PF00005 ABC transporter 353 501 8.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 SUPERFAMILY SSF90123 8 322 4.84E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 Gene3D G3DSA:3.40.50.300 329 589 4.7E-83 T 11-10-2018 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 SUPERFAMILY SSF52540 331 571 2.99E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_16600 1d4260d2904aa87a758485a7750d94a7 592 SMART SM00382 362 547 4.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 SUPERFAMILY SSF56784 5 218 1.87E-44 T 11-10-2018 IPR036412 HAD-like superfamily AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 Gene3D G3DSA:1.10.150.240 21 88 8.8E-43 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 Gene3D G3DSA:3.40.50.1000 9 192 8.8E-43 T 11-10-2018 IPR023214 HAD superfamily AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 189 1.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 9.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 9.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 9.3E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_24030 b448a67465a0fb03de38b2386bc57f87 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 5.7E-29 T 11-10-2018 AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.3E-56 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 Gene3D G3DSA:1.10.60.30 28 102 3.6E-26 T 11-10-2018 AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 Gene3D G3DSA:1.10.60.30 103 174 5.1E-24 T 11-10-2018 AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 PIRSF PIRSF016183 1 174 1.0E-71 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.861 T 11-10-2018 IPR006839 Ribosome-associated, YjgA AL538_07405 b5f2190eab5f468d0cc116539e60f18d 174 SUPERFAMILY SSF158710 28 169 3.01E-51 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 Gene3D G3DSA:1.20.1090.10 218 416 1.3E-50 T 11-10-2018 AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 Gene3D G3DSA:3.40.50.1970 41 217 5.5E-48 T 11-10-2018 AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 SUPERFAMILY SSF56796 43 414 7.46E-100 T 11-10-2018 AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 293 313 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 206 234 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_00165 eddc732e7d84baacdb47f3462fa2519b 417 Pfam PF00465 Iron-containing alcohol dehydrogenase 46 394 2.2E-94 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_11580 4d54784ce177f6cb0af68562923a02dc 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 24.15 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL538_11580 4d54784ce177f6cb0af68562923a02dc 122 SUPERFAMILY SSF52980 7 112 4.74E-22 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_11580 4d54784ce177f6cb0af68562923a02dc 122 Gene3D G3DSA:3.40.1350.10 13 122 4.3E-31 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL538_11580 4d54784ce177f6cb0af68562923a02dc 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 7.6E-28 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL538_11580 4d54784ce177f6cb0af68562923a02dc 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 120 8.7E-37 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 SUPERFAMILY SSF53474 453 697 2.44E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 1.1E-59 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 SUPERFAMILY SSF50993 37 448 9.42E-102 T 11-10-2018 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 Pfam PF00326 Prolyl oligopeptidase family 499 714 3.8E-70 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 442 3.7E-131 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 Gene3D G3DSA:2.130.10.120 108 444 8.8E-257 T 11-10-2018 AL538_26805 76a2396b9a6be257a27f69648a4b9d85 718 Gene3D G3DSA:3.40.50.1820 50 683 8.8E-257 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 SUPERFAMILY SSF46689 80 127 5.82E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 Pfam PF12833 Helix-turn-helix domain 50 127 1.2E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 SUPERFAMILY SSF46689 29 78 1.29E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 Gene3D G3DSA:1.10.10.60 78 131 2.0E-14 T 11-10-2018 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 Gene3D G3DSA:1.10.10.60 25 77 8.7E-12 T 11-10-2018 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 SMART SM00342 44 126 2.2E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19910 37c5938df4ba592c4bc85eb6478ea7f2 134 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 81 122 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 1.0E-28 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 Gene3D G3DSA:2.60.120.10 143 249 9.3E-86 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 Pfam PF02678 Pirin 24 121 1.7E-31 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 Gene3D G3DSA:2.60.120.10 18 275 9.3E-86 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 SUPERFAMILY SSF51182 5 280 1.3E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_26945 0745afe6f20492cd21b9cd541b7e7114 282 PIRSF PIRSF006232 3 282 2.1E-83 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AL538_25465 635250f12b1b7004832a2197a4fa4b3b 328 Gene3D G3DSA:3.20.20.140 1 326 7.8E-92 T 11-10-2018 AL538_25465 635250f12b1b7004832a2197a4fa4b3b 328 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 17 323 6.5E-73 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AL538_25465 635250f12b1b7004832a2197a4fa4b3b 328 SUPERFAMILY SSF51556 4 325 1.36E-82 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_24185 f5155cc5dfb34d36fba8e5eac30f2ef2 206 Gene3D G3DSA:1.10.287.110 146 206 2.5E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_24185 f5155cc5dfb34d36fba8e5eac30f2ef2 206 SUPERFAMILY SSF46565 156 205 8.37E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_24185 f5155cc5dfb34d36fba8e5eac30f2ef2 206 SMART SM00271 153 206 1.2E-6 T 11-10-2018 IPR001623 DnaJ domain AL538_24185 f5155cc5dfb34d36fba8e5eac30f2ef2 206 Pfam PF12339 DNA-J related protein 17 138 5.4E-43 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal AL538_24185 f5155cc5dfb34d36fba8e5eac30f2ef2 206 Pfam PF00226 DnaJ domain 159 205 6.0E-10 T 11-10-2018 IPR001623 DnaJ domain AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 Gene3D G3DSA:3.40.190.10 97 168 1.1E-8 T 11-10-2018 AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 Gene3D G3DSA:3.40.190.10 169 265 1.1E-8 T 11-10-2018 AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 SUPERFAMILY SSF46785 2 85 1.36E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 Pfam PF03466 LysR substrate binding domain 96 288 6.6E-13 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 SUPERFAMILY SSF53850 90 288 9.62E-25 T 11-10-2018 AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_11970 e657ad72fc6055afdfadbefbf3e4ae95 296 Gene3D G3DSA:1.10.10.10 4 92 8.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 SMART SM00862 156 232 1.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 SUPERFAMILY SSF46894 132 234 5.1E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 Gene3D G3DSA:1.10.10.10 130 239 9.8E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 11-10-2018 IPR011006 CheY-like superfamily AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 11-10-2018 AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 SMART SM00448 5 116 3.8E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.3E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_10355 66fc5f3efb1bdb4beb0513d41e55dd45 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_18870 41cada4489b01e01db1be44c110643c9 846 SUPERFAMILY SSF54556 461 546 7.18E-17 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:3.10.50.10 466 551 8.7E-176 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_18870 41cada4489b01e01db1be44c110643c9 846 SMART SM00495 795 840 3.6E-14 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_18870 41cada4489b01e01db1be44c110643c9 846 Pfam PF02839 Carbohydrate binding domain 812 837 4.1E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_18870 41cada4489b01e01db1be44c110643c9 846 Pfam PF02010 REJ domain 615 784 4.8E-5 T 11-10-2018 IPR002859 PKD/REJ-like domain AL538_18870 41cada4489b01e01db1be44c110643c9 846 Pfam PF00704 Glycosyl hydrolases family 18 162 575 1.3E-87 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:2.60.40.10 694 785 3.7E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_18870 41cada4489b01e01db1be44c110643c9 846 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_18870 41cada4489b01e01db1be44c110643c9 846 SMART SM00089 602 690 0.13 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_18870 41cada4489b01e01db1be44c110643c9 846 SMART SM00089 701 787 0.77 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_18870 41cada4489b01e01db1be44c110643c9 846 SMART SM00089 55 134 0.78 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_18870 41cada4489b01e01db1be44c110643c9 846 SUPERFAMILY SSF49299 596 689 4.32E-7 T 11-10-2018 IPR035986 PKD domain superfamily AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:2.60.40.10 22 132 2.2E-46 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:2.10.10.20 795 838 1.6E-17 T 11-10-2018 AL538_18870 41cada4489b01e01db1be44c110643c9 846 SUPERFAMILY SSF81296 21 133 3.36E-32 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:2.60.40.10 597 692 5.4E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_18870 41cada4489b01e01db1be44c110643c9 846 Gene3D G3DSA:3.20.20.80 162 577 8.7E-176 T 11-10-2018 AL538_18870 41cada4489b01e01db1be44c110643c9 846 Pfam PF08329 Chitinase A, N-terminal domain 21 156 1.2E-55 T 11-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_18870 41cada4489b01e01db1be44c110643c9 846 SUPERFAMILY SSF51055 793 841 1.53E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_18870 41cada4489b01e01db1be44c110643c9 846 SUPERFAMILY SSF51445 135 588 1.58E-91 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18870 41cada4489b01e01db1be44c110643c9 846 SMART SM00636 159 575 3.4E-159 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_03865 708c333cf79f6734e3605a742a87c65c 320 SUPERFAMILY SSF48019 208 319 8.33E-14 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL538_03865 708c333cf79f6734e3605a742a87c65c 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 197 1.1E-62 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03865 708c333cf79f6734e3605a742a87c65c 320 Pfam PF13177 DNA polymerase III, delta subunit 12 162 2.3E-44 T 11-10-2018 AL538_03865 708c333cf79f6734e3605a742a87c65c 320 SUPERFAMILY SSF52540 2 179 8.32E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03865 708c333cf79f6734e3605a742a87c65c 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 207 314 2.2E-20 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03865 708c333cf79f6734e3605a742a87c65c 320 Gene3D G3DSA:3.40.50.300 3 165 6.8E-49 T 11-10-2018 AL538_07210 e4bccb6a5ddda518ebf28e331c281e06 149 SUPERFAMILY SSF69635 3 142 4.08E-26 T 11-10-2018 AL538_07210 e4bccb6a5ddda518ebf28e331c281e06 149 Gene3D G3DSA:3.30.1460.10 1 127 2.1E-24 T 11-10-2018 AL538_07210 e4bccb6a5ddda518ebf28e331c281e06 149 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 2.9E-11 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_16055 51202527065f6b60491e05b005e1dedb 310 Gene3D G3DSA:3.40.50.150 82 298 1.4E-45 T 11-10-2018 AL538_16055 51202527065f6b60491e05b005e1dedb 310 SUPERFAMILY SSF53335 9 287 7.4E-52 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_16055 51202527065f6b60491e05b005e1dedb 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 5.6E-173 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-38 T 11-10-2018 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.2E-38 T 11-10-2018 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.2E-38 T 11-10-2018 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.2E-38 T 11-10-2018 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.2E-38 T 11-10-2018 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 5.4E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 SUPERFAMILY SSF51905 2 313 1.39E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_16395 5e02935cdc066c983e8567f195737bc6 319 Gene3D G3DSA:3.50.50.60 10 312 5.4E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_16395 5e02935cdc066c983e8567f195737bc6 319 Gene3D G3DSA:3.50.50.60 118 244 5.4E-127 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_16395 5e02935cdc066c983e8567f195737bc6 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 2.1E-123 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_16395 5e02935cdc066c983e8567f195737bc6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.4E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_21285 67f7ab68230e4848a372c0bc805f26c7 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 239 5.8E-9 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_21285 67f7ab68230e4848a372c0bc805f26c7 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 6.6E-115 T 11-10-2018 IPR022522 Flagellar motor stator, MotA AL538_21285 67f7ab68230e4848a372c0bc805f26c7 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AL538_22140 eb1c3dd586cb398243897d96b41ed62c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 9.1E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_22140 eb1c3dd586cb398243897d96b41ed62c 296 SUPERFAMILY SSF161098 10 296 9.16E-69 T 11-10-2018 IPR035906 MetI-like superfamily AL538_22140 eb1c3dd586cb398243897d96b41ed62c 296 Gene3D G3DSA:1.10.3720.10 1 283 2.8E-74 T 11-10-2018 IPR035906 MetI-like superfamily AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 Gene3D G3DSA:3.40.50.2300 2 122 1.9E-33 T 11-10-2018 AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 SUPERFAMILY SSF46894 137 233 7.65E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 SMART SM00862 156 232 2.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 SMART SM00448 4 114 6.6E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 SUPERFAMILY SSF52172 2 130 1.99E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 Gene3D G3DSA:1.10.10.10 123 236 5.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11790 e98cca57d5ea7a42db65cb2daa9cc583 238 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.891 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 1.3E-74 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 Pfam PF14622 Ribonuclease-III-like 20 140 8.0E-33 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.1E-15 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AL538_06795 6702bfa768b7833b4f116a216b32738b 225 Gene3D G3DSA:1.10.1520.10 1 146 3.2E-44 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 SMART SM00358 155 223 4.5E-22 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AL538_06795 6702bfa768b7833b4f116a216b32738b 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 SUPERFAMILY SSF54768 108 222 1.89E-28 T 11-10-2018 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 Gene3D G3DSA:3.30.160.20 153 224 1.2E-19 T 11-10-2018 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 SMART SM00535 20 148 8.9E-55 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AL538_06795 6702bfa768b7833b4f116a216b32738b 225 SUPERFAMILY SSF69065 4 158 1.08E-49 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 Pfam PF00202 Aminotransferase class-III 33 395 5.2E-77 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 SUPERFAMILY SSF53383 2 423 5.56E-135 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.4E-194 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.198 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 Gene3D G3DSA:3.40.640.10 69 317 3.5E-179 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 Gene3D G3DSA:3.90.1150.10 7 418 3.5E-179 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_06275 588f2fe97cc7d6c7dd7fd92ecca7d7b6 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF55021 4 59 1.79E-8 T 11-10-2018 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.30.70.260 1 79 3.0E-15 T 11-10-2018 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 Gene3D G3DSA:3.40.50.170 81 277 9.4E-68 T 11-10-2018 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF01842 ACT domain 5 66 2.6E-7 T 11-10-2018 IPR002912 ACT domain AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.6E-123 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.332 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 SUPERFAMILY SSF53328 82 276 1.57E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PIRSF PIRSF036480 1 277 4.3E-112 T 11-10-2018 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 Pfam PF00551 Formyl transferase 82 259 1.1E-49 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_13835 8dfb40e92f891c9b4ac9400c34df8edf 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.7E-65 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AL538_01760 f201d4b00f048b433eff62f840301c85 388 Pfam PF07690 Major Facilitator Superfamily 12 320 8.6E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_01760 f201d4b00f048b433eff62f840301c85 388 SUPERFAMILY SSF103473 4 378 5.49E-32 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_01760 f201d4b00f048b433eff62f840301c85 388 Gene3D G3DSA:1.20.1250.20 2 185 4.4E-14 T 11-10-2018 AL538_01760 f201d4b00f048b433eff62f840301c85 388 Gene3D G3DSA:1.20.1250.20 200 381 1.1E-14 T 11-10-2018 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Gene3D G3DSA:3.30.830.10 731 916 1.1E-16 T 11-10-2018 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 SUPERFAMILY SSF63411 757 912 3.67E-16 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Gene3D G3DSA:3.30.830.10 29 250 1.5E-58 T 11-10-2018 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Pfam PF00675 Insulinase (Peptidase family M16) 47 159 5.8E-24 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 SUPERFAMILY SSF63411 26 239 1.68E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Pfam PF05193 Peptidase M16 inactive domain 669 847 8.1E-9 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Pfam PF05193 Peptidase M16 inactive domain 203 373 1.3E-13 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Gene3D G3DSA:3.30.830.10 506 715 2.4E-13 T 11-10-2018 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 Gene3D G3DSA:3.30.830.10 258 470 3.1E-7 T 11-10-2018 AL538_20015 7f1fca95a196a3329e3659ad1ad508e7 916 SUPERFAMILY SSF63411 490 713 4.54E-24 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 SUPERFAMILY SSF89360 3 99 1.65E-22 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 1.0E-95 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 SUPERFAMILY SSF117916 97 187 6.32E-23 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-26 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 Gene3D G3DSA:2.60.300.12 2 100 8.8E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 101 2.9E-12 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 Pfam PF01106 NifU-like domain 113 180 3.2E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 Gene3D G3DSA:3.30.300.130 103 191 3.0E-19 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AL538_10320 84d16352a6f8d015cec188bad87b1a86 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.778 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SMART SM00052 314 560 1.5E-68 T 11-10-2018 IPR001633 EAL domain AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SUPERFAMILY SSF141868 319 564 4.71E-72 T 11-10-2018 IPR035919 EAL domain superfamily AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Gene3D G3DSA:3.30.70.270 145 309 7.3E-21 T 11-10-2018 AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SUPERFAMILY SSF55785 27 137 2.09E-17 T 11-10-2018 IPR035965 PAS domain superfamily AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Gene3D G3DSA:3.30.450.20 35 138 9.0E-18 T 11-10-2018 AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SUPERFAMILY SSF55073 153 306 2.51E-18 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 1.5E-15 T 11-10-2018 IPR000160 GGDEF domain AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SMART SM00267 135 304 6.9E-8 T 11-10-2018 IPR000160 GGDEF domain AL538_16490 d82859f6646309d1e77ce24515b0a577 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 6.5E-13 T 11-10-2018 IPR000014 PAS domain AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SMART SM00086 95 135 0.0015 T 11-10-2018 IPR001610 PAC motif AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Gene3D G3DSA:3.20.20.450 314 566 7.8E-78 T 11-10-2018 IPR035919 EAL domain superfamily AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Pfam PF08447 PAS fold 45 113 2.0E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL538_16490 d82859f6646309d1e77ce24515b0a577 568 Pfam PF00563 EAL domain 322 555 5.4E-63 T 11-10-2018 IPR001633 EAL domain AL538_16490 d82859f6646309d1e77ce24515b0a577 568 SMART SM00091 22 88 0.0063 T 11-10-2018 IPR000014 PAS domain AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 3.7E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 SMART SM01079 47 223 5.9E-29 T 11-10-2018 IPR006189 CHASE domain AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 451 2.8E-47 T 11-10-2018 IPR000160 GGDEF domain AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 Pfam PF03924 CHASE domain 109 212 3.5E-17 T 11-10-2018 IPR006189 CHASE domain AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 SUPERFAMILY SSF55073 299 451 1.96E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 Gene3D G3DSA:3.30.70.270 290 452 3.9E-49 T 11-10-2018 AL538_20725 f824a01fd1fcbf1b4f7b66f409f5be2c 452 SMART SM00267 283 450 8.9E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_13430 24e10631d3abd7109a5fe67565171556 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 6.2E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AL538_13430 24e10631d3abd7109a5fe67565171556 275 Gene3D G3DSA:3.40.50.150 75 274 2.3E-60 T 11-10-2018 AL538_13430 24e10631d3abd7109a5fe67565171556 275 SUPERFAMILY SSF53335 76 269 2.71E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_13430 24e10631d3abd7109a5fe67565171556 275 Gene3D G3DSA:1.10.155.10 1 74 9.5E-11 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 5.6E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 5.3E-68 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL538_13430 24e10631d3abd7109a5fe67565171556 275 SMART SM00138 8 272 8.5E-132 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AL538_13430 24e10631d3abd7109a5fe67565171556 275 SUPERFAMILY SSF47757 3 75 1.7E-14 T 11-10-2018 AL538_05050 f39041bca525b95364813da26a19d09c 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 7.0E-75 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL538_05050 f39041bca525b95364813da26a19d09c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.6E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_05050 f39041bca525b95364813da26a19d09c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 4.6E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_05050 f39041bca525b95364813da26a19d09c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.6E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_05050 f39041bca525b95364813da26a19d09c 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.6E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_05050 f39041bca525b95364813da26a19d09c 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 8.4E-57 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 SUPERFAMILY SSF141734 14 122 7.45E-45 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.5E-31 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Gene3D G3DSA:3.10.20.400 3 102 2.6E-36 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Gene3D G3DSA:1.10.287.1080 120 211 1.2E-29 T 11-10-2018 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.9E-32 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 8.0E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.536 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 SUPERFAMILY SSF101386 123 210 2.43E-25 T 11-10-2018 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AL538_15835 e8212f9cdbe9e62c6e7e481220b33ec3 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 7.0E-22 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 SUPERFAMILY SSF52540 42 273 1.5E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 SMART SM00382 52 253 8.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 1.8E-182 T 11-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 Gene3D G3DSA:3.40.50.300 34 266 5.3E-62 T 11-10-2018 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 Gene3D G3DSA:3.10.580.10 267 388 2.2E-6 T 11-10-2018 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 SUPERFAMILY SSF54631 270 387 1.29E-6 T 11-10-2018 AL538_25875 0670ab0e5ac63a244228b1baf0d254b5 394 Pfam PF00005 ABC transporter 44 195 1.7E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_09275 1962444531153291d6be7956a7e0454a 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AL538_09275 1962444531153291d6be7956a7e0454a 724 Gene3D G3DSA:3.40.50.300 11 274 2.4E-97 T 11-10-2018 AL538_09275 1962444531153291d6be7956a7e0454a 724 Gene3D G3DSA:3.40.50.300 282 637 9.5E-132 T 11-10-2018 AL538_09275 1962444531153291d6be7956a7e0454a 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 8.2E-74 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL538_09275 1962444531153291d6be7956a7e0454a 724 Gene3D G3DSA:1.10.10.160 115 188 2.4E-97 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL538_09275 1962444531153291d6be7956a7e0454a 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.0E-78 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL538_09275 1962444531153291d6be7956a7e0454a 724 Gene3D G3DSA:1.10.486.10 383 539 9.5E-132 T 11-10-2018 AL538_09275 1962444531153291d6be7956a7e0454a 724 SUPERFAMILY SSF52540 8 643 6.57E-180 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 168 374 3.0E-9 T 11-10-2018 AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 Pfam PF13186 Iron-sulfur cluster-binding domain 271 332 2.4E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 Gene3D G3DSA:3.20.20.70 5 381 6.2E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 Pfam PF04055 Radical SAM superfamily 15 172 2.0E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 271 359 2.8E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 SUPERFAMILY SSF102114 16 341 1.27E-38 T 11-10-2018 AL538_19655 ca3b46e0db1a2adb087bd86484132820 383 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 8 375 2.9E-137 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 Gene3D G3DSA:3.30.1360.100 318 404 1.3E-31 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 402 2.5E-95 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 Gene3D G3DSA:3.30.420.370 146 216 2.8E-86 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 SUPERFAMILY SSF53067 6 148 1.68E-40 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 Pfam PF05134 Type II secretion system (T2SS), protein L 9 241 7.5E-80 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 Pfam PF12693 GspL periplasmic domain 245 403 3.0E-53 T 11-10-2018 IPR025691 GspL periplasmic domain AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 SUPERFAMILY SSF53067 150 239 7.12E-23 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 Gene3D G3DSA:3.30.420.380 7 238 2.8E-86 T 11-10-2018 AL538_10295 bfb1f29f6e1c985834f9f12b265c824a 404 PIRSF PIRSF015761 8 404 9.9E-38 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 SUPERFAMILY SSF161098 308 558 9.03E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 3.7E-257 T 11-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 SUPERFAMILY SSF161098 31 284 9.81E-43 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 Gene3D G3DSA:1.10.3720.10 28 291 8.7E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 Gene3D G3DSA:1.10.3720.10 310 564 1.9E-29 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 558 1.3E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_20910 2a45234eedf3c72d409f74554c6f0dc0 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 287 2.2E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_11170 832538ca90236df83ea90f65a9b5727e 266 Pfam PF06738 Putative threonine/serine exporter 21 258 2.5E-67 T 11-10-2018 IPR010619 Putative threonine/serine exporter AL538_15240 f75f387f83a723dba3b4574786d28b37 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 2.2E-78 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_15240 f75f387f83a723dba3b4574786d28b37 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 437 7.4E-176 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_15240 f75f387f83a723dba3b4574786d28b37 440 Gene3D G3DSA:3.40.50.12240 16 438 4.9E-152 T 11-10-2018 AL538_15240 f75f387f83a723dba3b4574786d28b37 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 1.3E-9 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_15240 f75f387f83a723dba3b4574786d28b37 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 5.6E-201 T 11-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_15240 f75f387f83a723dba3b4574786d28b37 440 SUPERFAMILY SSF52540 95 364 1.43E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15240 f75f387f83a723dba3b4574786d28b37 440 SMART SM00382 161 342 5.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15240 f75f387f83a723dba3b4574786d28b37 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 SMART SM00945 3 117 8.3E-66 T 11-10-2018 IPR016103 ProQ/FinO domain AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Pfam PF17516 ProQ C-terminal domain 159 207 4.7E-22 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 SUPERFAMILY SSF48657 4 117 9.55E-41 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Pfam PF04352 ProQ/FINO family 6 113 1.1E-43 T 11-10-2018 IPR016103 ProQ/FinO domain AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 208 30.504 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 AL538_00890 78dbf4fc4b3ee8e3c4fa8157f2b60ed3 208 Gene3D G3DSA:1.10.1710.10 1 117 7.2E-26 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 72 90 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 25 279 35.107 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 SUPERFAMILY SSF51366 282 477 1.73E-54 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 280 479 29.812 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 SUPERFAMILY SSF51366 23 276 6.71E-82 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 282 473 1.5E-56 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Gene3D G3DSA:3.20.20.70 30 280 6.4E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Pfam PF00218 Indole-3-glycerol phosphate synthase 27 276 6.2E-95 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AL538_03385 c0eaaff0b1b0e5f18408de3ad7123636 479 Gene3D G3DSA:3.20.20.70 281 473 6.4E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_21215 ee7ff0c997db4c8d430ed6608e10d710 552 Pfam PF00239 Resolvase, N terminal domain 6 157 1.6E-11 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_21215 ee7ff0c997db4c8d430ed6608e10d710 552 SMART SM00857 5 169 2.1E-10 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_21215 ee7ff0c997db4c8d430ed6608e10d710 552 Gene3D G3DSA:3.40.50.1390 2 170 1.3E-17 T 11-10-2018 AL538_21215 ee7ff0c997db4c8d430ed6608e10d710 552 SUPERFAMILY SSF53041 5 156 8.24E-10 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 SUPERFAMILY SSF53800 5 320 5.23E-104 T 11-10-2018 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 Hamap MF_00323 Ferrochelatase [hemH]. 6 321 38.887 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 ProSitePatterns PS00534 Ferrochelatase signature. 190 208 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 Gene3D G3DSA:3.40.50.1400 9 321 3.7E-94 T 11-10-2018 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 Pfam PF00762 Ferrochelatase 7 320 4.2E-110 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 Gene3D G3DSA:3.40.50.1400 164 302 3.7E-94 T 11-10-2018 AL538_13635 4d144da32a6d726b853e559ab5250c4b 321 TIGRFAM TIGR00109 hemH: ferrochelatase 5 321 5.4E-105 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AL538_20920 a2fa083ab1fdffbe69d789016c6d5a78 301 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 1.1E-103 T 11-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative AL538_20920 a2fa083ab1fdffbe69d789016c6d5a78 301 Pfam PF00892 EamA-like transporter family 153 299 4.4E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_20920 a2fa083ab1fdffbe69d789016c6d5a78 301 Pfam PF00892 EamA-like transporter family 5 136 2.1E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_20920 a2fa083ab1fdffbe69d789016c6d5a78 301 SUPERFAMILY SSF103481 200 299 1.57E-7 T 11-10-2018 AL538_20920 a2fa083ab1fdffbe69d789016c6d5a78 301 SUPERFAMILY SSF103481 45 140 3.14E-9 T 11-10-2018 AL538_06950 966415a9bc1d592acc880dab5d934398 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 SUPERFAMILY SSF55973 111 232 8.24E-50 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 SUPERFAMILY SSF55973 233 382 9.03E-71 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 8.5E-44 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Gene3D G3DSA:3.30.300.10 5 233 3.1E-178 T 11-10-2018 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.8E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.561 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Gene3D G3DSA:3.30.300.10 102 373 3.1E-178 T 11-10-2018 AL538_06950 966415a9bc1d592acc880dab5d934398 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.2E-195 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Gene3D G3DSA:3.30.300.10 11 270 3.1E-178 T 11-10-2018 AL538_06950 966415a9bc1d592acc880dab5d934398 384 PIRSF PIRSF000497 1 381 9.9E-175 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_06950 966415a9bc1d592acc880dab5d934398 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.1E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AL538_24750 cd81490fe7449c53808db515ad327275 108 Pfam PF00034 Cytochrome c 33 98 1.8E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_24750 cd81490fe7449c53808db515ad327275 108 Gene3D G3DSA:1.10.760.10 22 102 3.1E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_24750 cd81490fe7449c53808db515ad327275 108 SUPERFAMILY SSF46626 32 103 5.96E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23410 9c7e3a3c22a0d2a270b1c6f52a46b5de 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 1.2E-33 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_23410 9c7e3a3c22a0d2a270b1c6f52a46b5de 166 Gene3D G3DSA:2.60.40.4150 29 164 3.7E-31 T 11-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AL538_23410 9c7e3a3c22a0d2a270b1c6f52a46b5de 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 6.8E-43 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_25830 068b03800fef04985173bf10b5905ec7 786 SUPERFAMILY SSF47384 252 335 3.14E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_25830 068b03800fef04985173bf10b5905ec7 786 SMART SM00387 381 494 1.5E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25830 068b03800fef04985173bf10b5905ec7 786 SUPERFAMILY SSF55874 323 496 1.83E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25830 068b03800fef04985173bf10b5905ec7 786 SMART SM00388 269 334 2.2E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Gene3D G3DSA:3.40.50.2300 499 636 4.2E-33 T 11-10-2018 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Pfam PF01627 Hpt domain 674 762 3.3E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Gene3D G3DSA:1.10.287.130 237 332 2.5E-27 T 11-10-2018 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Gene3D G3DSA:1.20.120.160 667 778 2.0E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_25830 068b03800fef04985173bf10b5905ec7 786 SMART SM00448 517 629 1.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 7.8E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25830 068b03800fef04985173bf10b5905ec7 786 SUPERFAMILY SSF47226 613 760 7.33E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Pfam PF00072 Response regulator receiver domain 519 629 3.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Gene3D G3DSA:3.30.565.10 334 498 2.0E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25830 068b03800fef04985173bf10b5905ec7 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 8.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25830 068b03800fef04985173bf10b5905ec7 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 8.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25830 068b03800fef04985173bf10b5905ec7 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 8.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25830 068b03800fef04985173bf10b5905ec7 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 8.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25830 068b03800fef04985173bf10b5905ec7 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 5.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25830 068b03800fef04985173bf10b5905ec7 786 SUPERFAMILY SSF52172 516 655 2.7E-30 T 11-10-2018 IPR011006 CheY-like superfamily AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 Pfam PF08798 CRISPR associated protein 1 219 5.3E-50 T 11-10-2018 IPR010179 CRISPR-associated protein Cse3 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 SUPERFAMILY SSF117987 1 71 4.97E-8 T 11-10-2018 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 Gene3D G3DSA:3.30.70.1200 1 83 1.0E-6 T 11-10-2018 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 SMART SM01101 1 220 2.3E-71 T 11-10-2018 IPR010179 CRISPR-associated protein Cse3 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 SUPERFAMILY SSF117987 84 219 3.14E-26 T 11-10-2018 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 Gene3D G3DSA:3.30.70.1210 84 221 3.2E-25 T 11-10-2018 AL538_00335 925ec9fb055045a09b15e12ac2792acb 221 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 219 1.6E-51 T 11-10-2018 IPR010179 CRISPR-associated protein Cse3 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 3.3E-206 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.248 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 Pfam PF00155 Aminotransferase class I and II 43 387 5.5E-75 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 Gene3D G3DSA:3.90.1150.10 40 387 3.4E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 Gene3D G3DSA:3.40.640.10 58 296 3.4E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_21500 86e9bf2d9315a7b27e683b804bb3ca6b 397 SUPERFAMILY SSF53383 4 395 5.36E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_05410 30f35ff3d24ce94f3503cccc55c22c87 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.206 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL538_05410 30f35ff3d24ce94f3503cccc55c22c87 379 Gene3D G3DSA:3.40.50.2000 174 357 1.9E-5 T 11-10-2018 AL538_05410 30f35ff3d24ce94f3503cccc55c22c87 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 8.3E-147 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL538_05410 30f35ff3d24ce94f3503cccc55c22c87 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 2.4E-133 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 AL538_05410 30f35ff3d24ce94f3503cccc55c22c87 379 SUPERFAMILY SSF53756 6 378 6.67E-29 T 11-10-2018 AL538_02065 f747501c75a0d1ab07615e797396147d 374 Gene3D G3DSA:3.30.70.270 192 365 2.0E-50 T 11-10-2018 AL538_02065 f747501c75a0d1ab07615e797396147d 374 SUPERFAMILY SSF47188 3 131 8.89E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AL538_02065 f747501c75a0d1ab07615e797396147d 374 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 4.1E-42 T 11-10-2018 IPR000160 GGDEF domain AL538_02065 f747501c75a0d1ab07615e797396147d 374 SUPERFAMILY SSF55073 211 365 1.49E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_02065 f747501c75a0d1ab07615e797396147d 374 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 6.2E-31 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AL538_02065 f747501c75a0d1ab07615e797396147d 374 SMART SM00267 195 367 3.6E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_02065 f747501c75a0d1ab07615e797396147d 374 Gene3D G3DSA:1.20.120.50 2 135 1.1E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily AL538_02065 f747501c75a0d1ab07615e797396147d 374 Pfam PF01814 Hemerythrin HHE cation binding domain 13 127 1.3E-9 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL538_02065 f747501c75a0d1ab07615e797396147d 374 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 7.7E-47 T 11-10-2018 IPR000160 GGDEF domain AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 1.2E-176 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82714 712 788 3.79E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82693 40 135 1.46E-19 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.70.1440 655 856 1.7E-266 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:1.20.1640.10 10 508 1.7E-266 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.2090.10 179 270 1.7E-266 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.70.1320 135 328 1.7E-266 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82866 292 491 3.92E-38 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.70.1430 40 804 1.7E-266 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82866 793 1015 7.59E-45 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.7E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82714 185 266 1.03E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.2090.10 706 796 1.7E-266 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:1.20.1640.10 509 1008 1.7E-266 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 SUPERFAMILY SSF82693 136 326 7.85E-22 T 11-10-2018 AL538_23900 ffd4a3fb93ebd4b6e9b733ccdaac5f96 1019 Gene3D G3DSA:3.30.70.1430 556 654 1.7E-266 T 11-10-2018 AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 SMART SM00388 220 289 7.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 SUPERFAMILY SSF47384 204 289 1.18E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 286 3.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 Gene3D G3DSA:3.30.565.10 285 403 4.9E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 Gene3D G3DSA:1.10.287.130 164 282 2.3E-18 T 11-10-2018 AL538_01725 8b49cceed7f74865a22da91b2ee4755b 419 SUPERFAMILY SSF55874 294 400 9.63E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_04885 03fefef9084e025e784af2da028980c5 310 Gene3D G3DSA:3.40.50.150 109 283 3.1E-46 T 11-10-2018 AL538_04885 03fefef9084e025e784af2da028980c5 310 PIRSF PIRSF037167 2 307 1.4E-150 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL538_04885 03fefef9084e025e784af2da028980c5 310 Gene3D G3DSA:1.10.8.10 16 106 1.2E-5 T 11-10-2018 AL538_04885 03fefef9084e025e784af2da028980c5 310 SUPERFAMILY SSF53335 16 294 1.35E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_04885 03fefef9084e025e784af2da028980c5 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_04885 03fefef9084e025e784af2da028980c5 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 303 3.7E-97 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL538_04885 03fefef9084e025e784af2da028980c5 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.251 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL538_04885 03fefef9084e025e784af2da028980c5 310 Pfam PF05175 Methyltransferase small domain 134 216 6.5E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL538_04885 03fefef9084e025e784af2da028980c5 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 4.7E-139 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AL538_19040 42f8a467844578428fe50a74e409b82e 297 Gene3D G3DSA:1.10.10.10 1 83 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19040 42f8a467844578428fe50a74e409b82e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19040 42f8a467844578428fe50a74e409b82e 297 Pfam PF03466 LysR substrate binding domain 126 278 7.5E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_19040 42f8a467844578428fe50a74e409b82e 297 SUPERFAMILY SSF46785 1 81 1.84E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19040 42f8a467844578428fe50a74e409b82e 297 SUPERFAMILY SSF53850 90 279 1.1E-16 T 11-10-2018 AL538_19040 42f8a467844578428fe50a74e409b82e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19040 42f8a467844578428fe50a74e409b82e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19040 42f8a467844578428fe50a74e409b82e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19040 42f8a467844578428fe50a74e409b82e 297 Gene3D G3DSA:3.40.190.290 130 277 3.1E-5 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.812 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07815 7ed59b4783713d52f766992700a07971 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 Pfam PF00206 Lyase 6 301 4.3E-86 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL538_07815 7ed59b4783713d52f766992700a07971 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.2E-23 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07815 7ed59b4783713d52f766992700a07971 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 7.3E-200 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AL538_07815 7ed59b4783713d52f766992700a07971 624 SUPERFAMILY SSF55729 466 584 7.32E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_07815 7ed59b4783713d52f766992700a07971 624 SUPERFAMILY SSF48557 3 456 8.17E-140 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_07815 7ed59b4783713d52f766992700a07971 624 Gene3D G3DSA:3.40.630.30 463 604 1.6E-25 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 Gene3D G3DSA:1.10.40.30 363 433 2.4E-146 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 7.9E-9 T 11-10-2018 IPR000182 GNAT domain AL538_07815 7ed59b4783713d52f766992700a07971 624 Gene3D G3DSA:1.20.200.10 108 446 2.4E-146 T 11-10-2018 AL538_07815 7ed59b4783713d52f766992700a07971 624 PIRSF PIRSF036456 1 624 0.0 T 11-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07815 7ed59b4783713d52f766992700a07971 624 Gene3D G3DSA:1.10.275.10 1 107 2.2E-34 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL538_07815 7ed59b4783713d52f766992700a07971 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 11-10-2018 IPR000362 Fumarate lyase family AL538_01695 b1accb2d9ed61643410837aea448f40c 327 Pfam PF00005 ABC transporter 22 178 1.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_01695 b1accb2d9ed61643410837aea448f40c 327 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_01695 b1accb2d9ed61643410837aea448f40c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 313 3.3E-23 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_01695 b1accb2d9ed61643410837aea448f40c 327 SMART SM00382 30 228 3.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_01695 b1accb2d9ed61643410837aea448f40c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 2.9E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_01695 b1accb2d9ed61643410837aea448f40c 327 Gene3D G3DSA:3.40.50.300 1 324 1.1E-98 T 11-10-2018 AL538_01695 b1accb2d9ed61643410837aea448f40c 327 SUPERFAMILY SSF52540 1 249 6.91E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12770 edc0f4306ba20681f4fc6799871f3c6b 177 Pfam PF14437 MafB19-like deaminase 11 155 4.2E-33 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL538_12770 edc0f4306ba20681f4fc6799871f3c6b 177 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL538_12770 edc0f4306ba20681f4fc6799871f3c6b 177 Gene3D G3DSA:3.40.140.10 3 169 6.2E-64 T 11-10-2018 AL538_12770 edc0f4306ba20681f4fc6799871f3c6b 177 SUPERFAMILY SSF53927 5 159 1.67E-56 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_12770 edc0f4306ba20681f4fc6799871f3c6b 177 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.376 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 SUPERFAMILY SSF51569 3 205 3.48E-65 T 11-10-2018 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 5.2E-82 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 Pfam PF01081 KDPG and KHG aldolase 5 196 1.6E-70 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_15555 2236b0dab324290e1ed276954fa444ad 207 Gene3D G3DSA:3.20.20.70 1 207 1.2E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 SUPERFAMILY SSF55186 65 242 3.14E-64 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 1.7E-13 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 SUPERFAMILY SSF55681 244 527 3.98E-99 T 11-10-2018 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Gene3D G3DSA:3.30.980.10 70 223 8.6E-64 T 11-10-2018 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 SMART SM00863 171 220 1.6E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.3E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.3E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.3E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.3E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.3E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 1.2E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 1.0E-241 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.205 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 SUPERFAMILY SSF52954 530 638 7.1E-32 T 11-10-2018 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Pfam PF03129 Anticodon binding domain 542 631 8.2E-22 T 11-10-2018 IPR004154 Anticodon-binding AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Gene3D G3DSA:3.30.54.20 131 188 8.6E-64 T 11-10-2018 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Gene3D G3DSA:3.30.930.10 224 532 3.0E-129 T 11-10-2018 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL538_02130 63aaa8bc408d829210919c9d91e5b425 642 Gene3D G3DSA:3.40.50.800 533 642 1.3E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SMART SM00388 788 853 2.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SUPERFAMILY SSF47384 773 854 3.53E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 5.6E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Gene3D G3DSA:3.30.450.20 616 745 2.7E-11 T 11-10-2018 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SUPERFAMILY SSF52172 1025 1142 1.1E-19 T 11-10-2018 IPR011006 CheY-like superfamily AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SMART SM00448 1026 1139 3.4E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Gene3D G3DSA:3.40.50.2300 1013 1143 4.7E-18 T 11-10-2018 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Gene3D G3DSA:3.30.565.10 859 1010 6.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Pfam PF12860 PAS fold 634 748 1.0E-43 T 11-10-2018 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 9.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 4.1E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SMART SM00387 897 1006 4.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 SUPERFAMILY SSF55874 843 1002 1.13E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08445 1d339815fc02d3c850e1d2add60c4797 1143 Gene3D G3DSA:1.10.287.130 746 851 4.4E-15 T 11-10-2018 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 SUPERFAMILY SSF46626 321 461 2.29E-35 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 SUPERFAMILY SSF46626 176 322 1.35E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 SMART SM01235 15 157 9.8E-51 T 11-10-2018 IPR025992 Haem-binding domain AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 Gene3D G3DSA:1.10.760.10 187 334 5.9E-104 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 Pfam PF14376 Haem-binding domain 18 154 4.2E-31 T 11-10-2018 IPR025992 Haem-binding domain AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 Pfam PF03150 Di-haem cytochrome c peroxidase 187 334 8.0E-49 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 Pfam PF00034 Cytochrome c 346 458 1.1E-4 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26790 6e4aedf9a608e078ea4d103edce33f1b 468 Gene3D G3DSA:1.10.760.10 184 461 5.9E-104 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_13505 0133d767e66fca4549a54aaadc292572 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.5E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL538_13505 0133d767e66fca4549a54aaadc292572 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.3E-49 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL538_13505 0133d767e66fca4549a54aaadc292572 169 SUPERFAMILY SSF51261 18 166 3.84E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_13505 0133d767e66fca4549a54aaadc292572 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AL538_13505 0133d767e66fca4549a54aaadc292572 169 Gene3D G3DSA:2.70.70.10 9 169 5.2E-62 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_03515 83126a0b7921c782cfb0db31b039634d 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 290 3.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_03515 83126a0b7921c782cfb0db31b039634d 428 SUPERFAMILY SSF47384 210 292 1.12E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_03515 83126a0b7921c782cfb0db31b039634d 428 SMART SM00387 336 426 1.3E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_03515 83126a0b7921c782cfb0db31b039634d 428 SUPERFAMILY SSF55874 305 422 5.89E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_03515 83126a0b7921c782cfb0db31b039634d 428 SMART SM00388 227 292 1.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_03515 83126a0b7921c782cfb0db31b039634d 428 Gene3D G3DSA:3.30.565.10 302 428 6.0E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_03515 83126a0b7921c782cfb0db31b039634d 428 Gene3D G3DSA:1.10.287.130 177 293 3.0E-19 T 11-10-2018 AL538_24290 7be4692848c729e744bb22a8dd9408c5 140 Pfam PF12375 Phage protein 55 122 1.9E-20 T 11-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 Gene3D G3DSA:2.60.410.10 280 370 1.0E-28 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 SMART SM00936 280 370 1.7E-31 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 SUPERFAMILY SSF69189 280 372 8.83E-26 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 1.1E-82 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 Gene3D G3DSA:3.40.710.10 14 278 2.1E-88 T 11-10-2018 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 8.0E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 8.0E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 8.0E-18 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 4.3E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_27010 449741e9abc386fb54f3ef1c8f14dca1 389 SUPERFAMILY SSF56601 10 280 2.26E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_07225 0155381250dd4421e1aa991d85e0a321 221 SUPERFAMILY SSF51735 2 207 4.5E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07225 0155381250dd4421e1aa991d85e0a321 221 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 178 0.0048 T 11-10-2018 AL538_07225 0155381250dd4421e1aa991d85e0a321 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 4.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_07225 0155381250dd4421e1aa991d85e0a321 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 4.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_07225 0155381250dd4421e1aa991d85e0a321 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 4.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_07225 0155381250dd4421e1aa991d85e0a321 221 Pfam PF00106 short chain dehydrogenase 2 182 1.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_07225 0155381250dd4421e1aa991d85e0a321 221 Gene3D G3DSA:3.40.50.720 1 221 1.8E-51 T 11-10-2018 AL538_15850 d597f52445a93263e349aff4bcbfc81a 245 Gene3D G3DSA:3.60.21.10 1 234 9.0E-17 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_15850 d597f52445a93263e349aff4bcbfc81a 245 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 3.5E-104 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL538_15850 d597f52445a93263e349aff4bcbfc81a 245 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.3E-6 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_15850 d597f52445a93263e349aff4bcbfc81a 245 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 123.656 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AL538_15850 d597f52445a93263e349aff4bcbfc81a 245 SUPERFAMILY SSF56300 1 221 3.14E-30 T 11-10-2018 AL538_01435 fc0c64d1df0d7ef007b984ed331b453e 645 SUPERFAMILY SSF53649 279 601 2.36E-69 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_01435 fc0c64d1df0d7ef007b984ed331b453e 645 PIRSF PIRSF005091 11 642 4.8E-102 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like AL538_01435 fc0c64d1df0d7ef007b984ed331b453e 645 Gene3D G3DSA:3.40.720.10 272 568 1.1E-201 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_01435 fc0c64d1df0d7ef007b984ed331b453e 645 Gene3D G3DSA:3.30.1120.80 244 640 1.1E-201 T 11-10-2018 AL538_01435 fc0c64d1df0d7ef007b984ed331b453e 645 Pfam PF00884 Sulfatase 281 551 3.4E-49 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Gene3D G3DSA:1.10.8.60 316 377 7.3E-13 T 11-10-2018 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 SUPERFAMILY SSF52172 6 192 3.13E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 SMART SM00448 7 118 4.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Pfam PF00072 Response regulator receiver domain 9 118 2.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 SMART SM00382 168 308 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Gene3D G3DSA:3.40.50.2300 4 138 1.2E-32 T 11-10-2018 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Pfam PF00158 Sigma-54 interaction domain 148 311 8.8E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 1.0E-4 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Gene3D G3DSA:1.10.10.60 381 446 3.2E-6 T 11-10-2018 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 SUPERFAMILY SSF46689 390 444 6.72E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 SUPERFAMILY SSF52540 148 371 1.31E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_20645 0f3f04fd8077244ca3a08b980237e851 449 Gene3D G3DSA:3.40.50.300 139 315 1.4E-57 T 11-10-2018 AL538_26965 f2c313911d9a5051cc9b6eeeeb38f90a 334 SUPERFAMILY SSF51556 4 327 2.45E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_26965 f2c313911d9a5051cc9b6eeeeb38f90a 334 Gene3D G3DSA:3.20.20.140 1 333 9.9E-104 T 11-10-2018 AL538_26965 f2c313911d9a5051cc9b6eeeeb38f90a 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 325 2.7E-114 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL538_26965 f2c313911d9a5051cc9b6eeeeb38f90a 334 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.5E-73 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL538_26965 f2c313911d9a5051cc9b6eeeeb38f90a 334 Hamap MF_01962 Adenine deaminase. 4 316 83.878 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AL538_09510 385ea156ac63aa01d204e4abb8737e4b 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_09510 385ea156ac63aa01d204e4abb8737e4b 200 Pfam PF01323 DSBA-like thioredoxin domain 40 187 4.6E-29 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL538_09510 385ea156ac63aa01d204e4abb8737e4b 200 Gene3D G3DSA:3.40.30.10 17 200 1.3E-55 T 11-10-2018 AL538_09510 385ea156ac63aa01d204e4abb8737e4b 200 PIRSF PIRSF001488 1 200 2.6E-70 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL538_09510 385ea156ac63aa01d204e4abb8737e4b 200 SUPERFAMILY SSF52833 20 197 7.69E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25425 1702b02d302de782f58c856cef44c5d8 242 Pfam PF00005 ABC transporter 18 170 8.0E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25425 1702b02d302de782f58c856cef44c5d8 242 PIRSF PIRSF039085 1 242 1.6E-91 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL538_25425 1702b02d302de782f58c856cef44c5d8 242 SUPERFAMILY SSF52540 3 236 4.54E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25425 1702b02d302de782f58c856cef44c5d8 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25425 1702b02d302de782f58c856cef44c5d8 242 Gene3D G3DSA:3.40.50.300 1 241 9.5E-73 T 11-10-2018 AL538_25425 1702b02d302de782f58c856cef44c5d8 242 SMART SM00382 27 218 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PIRSF PIRSF000044 1 407 1.8E-217 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 4.1E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 42 115 2.4E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.9E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 SUPERFAMILY SSF54292 35 124 2.42E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.588 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Gene3D G3DSA:2.40.30.10 126 264 1.8E-52 T 11-10-2018 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 6.0E-227 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 SUPERFAMILY SSF63380 105 272 1.79E-35 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Gene3D G3DSA:3.40.50.80 275 393 2.2E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 SUPERFAMILY SSF52343 258 402 1.7E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 Gene3D G3DSA:3.10.20.30 34 125 1.4E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 1.0E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 1.0E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 1.0E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 1.0E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_05645 5be6e7d056f775420d39bbb9f537265a 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 1.0E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 SUPERFAMILY SSF51206 9 122 2.88E-14 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Gene3D G3DSA:3.10.580.10 149 310 1.5E-30 T 11-10-2018 AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 SUPERFAMILY SSF54631 157 274 7.33E-28 T 11-10-2018 AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 618 1.1E-43 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Gene3D G3DSA:2.60.120.10 3 128 2.6E-11 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Pfam PF00027 Cyclic nucleotide-binding domain 37 122 1.9E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 436 1.5E-45 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 SMART SM00116 230 277 9.1E-8 T 11-10-2018 IPR000644 CBS domain AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 SMART SM00116 165 213 0.011 T 11-10-2018 IPR000644 CBS domain AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Pfam PF00571 CBS domain 223 273 5.0E-10 T 11-10-2018 IPR000644 CBS domain AL538_19645 0391069f23e3d9d4ba5b2b8748be23d3 623 Pfam PF00571 CBS domain 158 209 2.3E-6 T 11-10-2018 IPR000644 CBS domain AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 SUPERFAMILY SSF53335 8 267 2.48E-80 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.656 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 1.1E-77 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 Gene3D G3DSA:1.10.8.100 200 267 7.6E-25 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 SMART SM00650 25 197 3.3E-89 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 Gene3D G3DSA:3.40.50.150 1 198 2.2E-65 T 11-10-2018 AL538_11195 9a747b9ad37c1373f3e911a13e839a64 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 3.9E-88 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 Gene3D G3DSA:2.160.10.10 282 402 4.6E-33 T 11-10-2018 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 Pfam PF00483 Nucleotidyl transferase 6 272 2.6E-71 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 SUPERFAMILY SSF53448 4 358 8.92E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 SUPERFAMILY SSF51161 312 396 7.81E-17 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 1.2E-155 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.095 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_24000 41d3e63f5ee3a584acf546bd670ac656 404 Gene3D G3DSA:3.90.550.10 1 281 2.7E-93 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 Pfam PF03466 LysR substrate binding domain 121 308 8.2E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 SUPERFAMILY SSF53850 106 308 1.21E-39 T 11-10-2018 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:3.40.190.10 187 283 4.9E-41 T 11-10-2018 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11260 8a4b5d25485394f80dcf586f53d8ff08 319 Gene3D G3DSA:3.40.190.10 108 307 4.9E-41 T 11-10-2018 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 PIRSF PIRSF000429 1 402 4.9E-106 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 Pfam PF00108 Thiolase, N-terminal domain 6 259 1.8E-82 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 Pfam PF02803 Thiolase, C-terminal domain 268 400 1.5E-35 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 Gene3D G3DSA:3.40.47.10 7 273 3.2E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 2.8E-121 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 Gene3D G3DSA:3.40.47.10 125 397 3.2E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 SUPERFAMILY SSF53901 4 267 6.26E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_23665 b1afd59f4fa0f67dd6fb09f469f2b04a 403 SUPERFAMILY SSF53901 268 400 2.02E-33 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_12110 3b193a2714346bb34aced390927b6744 242 Gene3D G3DSA:1.25.40.10 28 242 1.2E-53 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12110 3b193a2714346bb34aced390927b6744 242 Pfam PF13525 Outer membrane lipoprotein 26 232 1.5E-79 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AL538_12110 3b193a2714346bb34aced390927b6744 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.378 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AL538_12110 3b193a2714346bb34aced390927b6744 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 6 239 2.0E-79 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AL538_12110 3b193a2714346bb34aced390927b6744 242 SUPERFAMILY SSF48452 30 119 7.59E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25515 7d771c97592d9bae8c27a1e75b52f4b5 226 Gene3D G3DSA:3.10.129.10 77 225 1.3E-35 T 11-10-2018 AL538_25515 7d771c97592d9bae8c27a1e75b52f4b5 226 SUPERFAMILY SSF54637 78 221 2.64E-30 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_25515 7d771c97592d9bae8c27a1e75b52f4b5 226 Pfam PF01575 MaoC like domain 84 201 6.1E-22 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AL538_25270 8778648e420608e8d71898c33750fb64 311 SUPERFAMILY SSF55136 167 303 1.33E-14 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_25270 8778648e420608e8d71898c33750fb64 311 Gene3D G3DSA:3.30.530.20 5 155 6.1E-14 T 11-10-2018 IPR023393 START-like domain superfamily AL538_25270 8778648e420608e8d71898c33750fb64 311 Pfam PF06445 GyrI-like small molecule binding domain 166 308 1.3E-10 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AL538_25270 8778648e420608e8d71898c33750fb64 311 SMART SM00871 160 311 1.3E-4 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AL538_25270 8778648e420608e8d71898c33750fb64 311 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 7 149 1.0E-21 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AL538_25270 8778648e420608e8d71898c33750fb64 311 SUPERFAMILY SSF55961 6 150 2.23E-14 T 11-10-2018 AL538_25270 8778648e420608e8d71898c33750fb64 311 Gene3D G3DSA:3.20.80.10 159 309 8.2E-25 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 SMART SM00244 22 180 1.2E-59 T 11-10-2018 IPR001107 Band 7 domain AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 SUPERFAMILY SSF117892 53 187 9.42E-41 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 11-10-2018 IPR018080 Band 7/stomatin-like, conserved site AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.7E-31 T 11-10-2018 IPR001107 Band 7 domain AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 PRINTS PR00721 Stomatin signature 132 155 3.6E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 PRINTS PR00721 Stomatin signature 77 98 3.6E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 PRINTS PR00721 Stomatin signature 112 129 3.6E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 PRINTS PR00721 Stomatin signature 175 196 3.6E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 PRINTS PR00721 Stomatin signature 156 174 3.6E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_13555 bfb87154592497dcc6a9e3cb33174e26 304 Gene3D G3DSA:3.30.479.30 50 182 2.6E-42 T 11-10-2018 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 Gene3D G3DSA:3.20.20.70 2 246 1.2E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 Pfam PF04055 Radical SAM superfamily 24 178 2.5E-33 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 5.2E-107 T 11-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 Pfam PF13353 4Fe-4S single cluster domain 16 150 3.2E-21 T 11-10-2018 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 SUPERFAMILY SSF102114 23 219 6.02E-30 T 11-10-2018 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 PIRSF PIRSF000371 44 245 4.2E-45 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_14650 7bfb63b0dcf6bff616d23d157a1d0bc1 246 PIRSF PIRSF000371 1 48 7.5E-12 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 Gene3D G3DSA:3.50.50.60 8 391 3.6E-131 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 8.7E-130 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 Gene3D G3DSA:2.40.30.10 191 342 3.6E-131 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 Pfam PF03486 HI0933-like protein 5 395 1.5E-157 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 Gene3D G3DSA:1.10.8.260 265 325 3.6E-131 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 SUPERFAMILY SSF51905 1 397 1.22E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 SUPERFAMILY SSF160996 193 341 2.49E-42 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.2E-5 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-5 T 11-10-2018 AL538_10070 aa82724ab928787b2b1b29f04df393ac 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-5 T 11-10-2018 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 Gene3D G3DSA:2.40.50.100 57 185 1.3E-68 T 11-10-2018 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 SUPERFAMILY SSF111369 47 262 1.02E-36 T 11-10-2018 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 338 5.5E-85 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 Gene3D G3DSA:2.40.420.20 268 336 1.3E-68 T 11-10-2018 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 257 1.1E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 Gene3D G3DSA:1.10.287.470 92 151 1.3E-68 T 11-10-2018 AL538_14400 71580e08f868332f8e715f6e1c3f189b 365 Gene3D G3DSA:2.40.30.170 44 267 1.3E-68 T 11-10-2018 AL538_03485 7126b53cc1915863c37ba9fdda743ec5 222 Pfam PF08348 YheO-like PAS domain 17 123 1.0E-34 T 11-10-2018 IPR013559 YheO-like AL538_03485 7126b53cc1915863c37ba9fdda743ec5 222 Pfam PF13309 HTH domain 161 217 5.3E-12 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AL538_03485 7126b53cc1915863c37ba9fdda743ec5 222 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 3.0E-62 T 11-10-2018 IPR013559 YheO-like AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 PIRSF PIRSF000379 28 807 1.4E-168 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 7 807 0.0 T 11-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 SUPERFAMILY SSF51998 3 806 1.01E-222 T 11-10-2018 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 Pfam PF02901 Pyruvate formate lyase-like 8 668 2.7E-218 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 Gene3D G3DSA:3.20.70.20 7 807 3.4E-276 T 11-10-2018 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 Pfam PF01228 Glycine radical 685 788 7.9E-31 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL538_17965 6090a8cffe9133fe6ea977876e0c8185 807 ProSitePatterns PS00850 Glycine radical domain signature. 778 786 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_23025 7f2d006dd38f21de1570137cec7fc893 717 Pfam PF13515 Fusaric acid resistance protein-like 405 523 2.0E-22 T 11-10-2018 AL538_23025 7f2d006dd38f21de1570137cec7fc893 717 Pfam PF12805 FUSC-like inner membrane protein yccS 67 348 2.2E-114 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AL538_23025 7f2d006dd38f21de1570137cec7fc893 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 11-10-2018 IPR010019 Integral membrane protein, YccS AL538_23025 7f2d006dd38f21de1570137cec7fc893 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 5.9E-243 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK AL538_14125 baffc42d7c4bf1af7e519ec3438c7c19 414 Gene3D G3DSA:3.50.50.60 3 413 1.1E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_14125 baffc42d7c4bf1af7e519ec3438c7c19 414 Pfam PF01494 FAD binding domain 7 164 2.0E-16 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL538_14125 baffc42d7c4bf1af7e519ec3438c7c19 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.3E-6 T 11-10-2018 AL538_14125 baffc42d7c4bf1af7e519ec3438c7c19 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.3E-6 T 11-10-2018 AL538_14125 baffc42d7c4bf1af7e519ec3438c7c19 414 SUPERFAMILY SSF51905 4 388 1.73E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_26610 dd6aa07b872c458978907117a929e413 817 Gene3D G3DSA:3.30.379.10 14 162 5.0E-23 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_26610 dd6aa07b872c458978907117a929e413 817 SUPERFAMILY SSF55545 31 165 5.89E-30 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_26610 dd6aa07b872c458978907117a929e413 817 Gene3D G3DSA:3.20.20.80 164 448 6.6E-89 T 11-10-2018 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 6.5E-41 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_26610 dd6aa07b872c458978907117a929e413 817 SUPERFAMILY SSF51445 166 618 1.53E-101 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_26610 dd6aa07b872c458978907117a929e413 817 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 2.4E-14 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL538_26610 dd6aa07b872c458978907117a929e413 817 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 605 1.6E-112 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_26610 dd6aa07b872c458978907117a929e413 817 Gene3D G3DSA:3.20.20.80 530 635 3.7E-15 T 11-10-2018 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 SMART SM01060 34 416 1.1E-241 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PIRSF PIRSF038928 24 506 9.6E-189 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 SUPERFAMILY SSF56634 29 508 1.83E-191 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 345 371 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 131 148 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 313 340 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 150 168 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 47 70 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 PRINTS PR00067 Catalase signature 110 128 1.4E-68 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 Pfam PF06628 Catalase-related immune-responsive 441 499 2.0E-18 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 Gene3D G3DSA:2.40.180.10 30 513 3.2E-205 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AL538_17640 60301c3eaed43ec6b8b4f5e170607cc9 513 Pfam PF00199 Catalase 34 411 1.4E-167 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 SUPERFAMILY SSF52172 3 173 9.39E-40 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Pfam PF00072 Response regulator receiver domain 6 115 3.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 1.3E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Gene3D G3DSA:1.10.8.60 301 379 6.5E-31 T 11-10-2018 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Gene3D G3DSA:1.10.10.60 403 466 7.2E-10 T 11-10-2018 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 SMART SM00382 149 296 4.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 SUPERFAMILY SSF46689 342 460 1.61E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 SUPERFAMILY SSF52540 135 370 8.11E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 SMART SM00448 4 115 8.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Gene3D G3DSA:3.40.50.2300 1 119 1.3E-33 T 11-10-2018 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_05125 0c47c53b6a2cff2c6b0cd21735320261 469 Gene3D G3DSA:3.40.50.300 120 300 4.2E-65 T 11-10-2018 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.9E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.9E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 3.9E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 3.9E-18 T 11-10-2018 IPR000362 Fumarate lyase family AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 1.3E-151 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.275.10 1 117 2.0E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.20.200.10 118 447 4.9E-159 T 11-10-2018 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 2.6E-52 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 Pfam PF00206 Lyase 14 313 4.2E-75 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 SUPERFAMILY SSF48557 4 448 5.5E-109 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_15760 0c321c541145da2d85b4f9fdd39d59ca 456 Gene3D G3DSA:1.10.40.30 383 446 4.9E-159 T 11-10-2018 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.358 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Gene3D G3DSA:3.40.1390.10 4 107 5.8E-26 T 11-10-2018 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Gene3D G3DSA:3.40.1190.10 108 339 6.0E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 SUPERFAMILY SSF53623 109 336 1.16E-71 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 SUPERFAMILY SSF63418 10 106 6.41E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Pfam PF08245 Mur ligase middle domain 115 315 6.7E-49 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 488 4.3E-167 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Gene3D G3DSA:3.90.190.20 340 490 5.2E-53 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 422 1.8E-23 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 Pfam PF01225 Mur ligase family, catalytic domain 26 103 8.1E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL538_11615 021fe4c241673d4b5662dd6bdd3757a1 491 SUPERFAMILY SSF53244 338 489 1.83E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_06270 0ee0db4e39c89c805744050534267d28 113 Gene3D G3DSA:2.60.300.12 7 113 1.8E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_06270 0ee0db4e39c89c805744050534267d28 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.6E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL538_06270 0ee0db4e39c89c805744050534267d28 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 36.053 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AL538_06270 0ee0db4e39c89c805744050534267d28 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL538_06270 0ee0db4e39c89c805744050534267d28 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 2.8E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL538_06270 0ee0db4e39c89c805744050534267d28 113 SUPERFAMILY SSF89360 7 99 1.08E-29 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_04995 614750b216bbd90c304943d36dd41281 387 PIRSF PIRSF020479 5 387 8.2E-139 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AL538_04995 614750b216bbd90c304943d36dd41281 387 SUPERFAMILY SSF50341 241 377 7.06E-15 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_04995 614750b216bbd90c304943d36dd41281 387 Pfam PF01584 CheW-like domain 244 376 7.0E-16 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_04995 614750b216bbd90c304943d36dd41281 387 SMART SM00260 240 374 3.0E-4 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 Gene3D G3DSA:3.40.710.10 27 282 4.5E-91 T 11-10-2018 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 9.2E-95 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 Gene3D G3DSA:2.60.410.10 283 373 2.5E-30 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 8.4E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 8.4E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 8.4E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 SUPERFAMILY SSF56601 11 283 7.79E-85 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_13055 93053ae961a86775c98a73e2e3839a90 392 SUPERFAMILY SSF69189 283 375 1.04E-27 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 372 7.0E-28 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_13055 93053ae961a86775c98a73e2e3839a90 392 SMART SM00936 283 373 1.2E-37 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 Gene3D G3DSA:3.40.190.10 92 285 2.7E-41 T 11-10-2018 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 Pfam PF03466 LysR substrate binding domain 88 288 2.3E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 SUPERFAMILY SSF53850 88 288 6.88E-29 T 11-10-2018 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 Gene3D G3DSA:1.10.10.10 3 89 2.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 62 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 Gene3D G3DSA:3.40.190.10 164 261 2.7E-41 T 11-10-2018 AL538_26280 f721c6927e7d5d3c5fafec4a7b1a8ca2 295 SUPERFAMILY SSF46785 9 88 1.43E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 SMART SM00490 257 338 9.8E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 2.0E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 Gene3D G3DSA:3.40.50.300 1 216 2.6E-73 T 11-10-2018 AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.9E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 SMART SM00487 20 221 2.4E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 SUPERFAMILY SSF52540 74 359 8.9E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14190 cd0b759167388cecf00ed9f56ff19cbf 411 Gene3D G3DSA:3.40.50.300 217 372 1.0E-44 T 11-10-2018 AL538_05480 c67688340d96b040065b9dea0d2633a2 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL538_05480 c67688340d96b040065b9dea0d2633a2 292 Pfam PF00557 Metallopeptidase family M24 12 271 4.7E-47 T 11-10-2018 IPR000994 Peptidase M24 AL538_05480 c67688340d96b040065b9dea0d2633a2 292 SUPERFAMILY SSF55920 3 282 1.09E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AL538_05480 c67688340d96b040065b9dea0d2633a2 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 1.5E-84 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL538_05480 c67688340d96b040065b9dea0d2633a2 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.878 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AL538_05480 c67688340d96b040065b9dea0d2633a2 292 Gene3D G3DSA:3.90.230.10 1 290 2.1E-104 T 11-10-2018 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 Gene3D G3DSA:3.40.50.300 185 379 5.5E-77 T 11-10-2018 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 SMART SM00487 196 395 7.8E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.176 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 Gene3D G3DSA:1.10.8.630 4 113 1.5E-34 T 11-10-2018 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 SMART SM00490 492 589 1.4E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 Pfam PF00270 DEAD/DEAH box helicase 219 364 1.7E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 SUPERFAMILY SSF52540 461 623 5.99E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 SUPERFAMILY SSF52540 70 379 2.15E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 6.0E-190 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AL538_10810 ffb0883e821ce0433cc494cbd4c8f262 733 Pfam PF00271 Helicase conserved C-terminal domain 499 588 1.6E-8 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_01195 13d2a5271e0c55dad09848959470febb 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 5.9E-65 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 Gene3D G3DSA:3.30.360.10 181 489 2.1E-124 T 11-10-2018 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 1.6E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 1.6E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 1.6E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 1.6E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 1.6E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 1.3E-203 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.278 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 PIRSF PIRSF000110 2 490 1.5E-179 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 7.0E-115 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AL538_01195 13d2a5271e0c55dad09848959470febb 501 Gene3D G3DSA:3.40.50.720 5 180 1.4E-60 T 11-10-2018 AL538_01195 13d2a5271e0c55dad09848959470febb 501 SUPERFAMILY SSF51735 4 195 1.17E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_01195 13d2a5271e0c55dad09848959470febb 501 SUPERFAMILY SSF55347 182 490 3.92E-113 T 11-10-2018 AL538_15130 7aee9c78f650538530aabb50d8306339 433 Gene3D G3DSA:3.30.70.1770 296 357 7.2E-9 T 11-10-2018 AL538_15130 7aee9c78f650538530aabb50d8306339 433 SUPERFAMILY SSF49879 12 95 8.39E-7 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AL538_15130 7aee9c78f650538530aabb50d8306339 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 8.6E-124 T 11-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AL538_15130 7aee9c78f650538530aabb50d8306339 433 Gene3D G3DSA:2.60.200.20 1 118 6.5E-14 T 11-10-2018 AL538_15130 7aee9c78f650538530aabb50d8306339 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 96 3.3E-16 T 11-10-2018 IPR032030 YscD, cytoplasmic domain AL538_15130 7aee9c78f650538530aabb50d8306339 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 5.2E-110 T 11-10-2018 IPR012843 Type III secretion system YscD/HrpQ AL538_14175 ae7b17146278e9750b99f634ce506f8a 290 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 173 249 6.1E-9 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL538_14175 ae7b17146278e9750b99f634ce506f8a 290 SUPERFAMILY SSF56214 171 286 5.89E-11 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL538_14175 ae7b17146278e9750b99f634ce506f8a 290 PRINTS PR01399 Enterobactin synthetase component D signature 211 227 9.1E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL538_14175 ae7b17146278e9750b99f634ce506f8a 290 PRINTS PR01399 Enterobactin synthetase component D signature 104 124 9.1E-8 T 11-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 Gene3D G3DSA:3.40.50.300 2 232 2.9E-55 T 11-10-2018 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 Gene3D G3DSA:3.40.50.300 254 517 2.7E-42 T 11-10-2018 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 SUPERFAMILY SSF52540 286 505 6.16E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 Pfam PF00005 ABC transporter 312 445 2.6E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 Pfam PF00005 ABC transporter 21 150 6.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 SMART SM00382 29 196 7.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 SMART SM00382 318 490 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 SUPERFAMILY SSF52540 4 198 1.05E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17835 b99d60b0f5a080bf49d40256352b7a87 578 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 SUPERFAMILY SSF53850 88 297 3.72E-39 T 11-10-2018 AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 Gene3D G3DSA:1.10.10.10 6 92 3.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 Pfam PF03466 LysR substrate binding domain 91 297 1.6E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 SUPERFAMILY SSF46785 11 111 6.76E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 Gene3D G3DSA:3.40.190.290 93 298 7.7E-50 T 11-10-2018 AL538_19495 379fad5931e457cadf53f29c13e7c02f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 65 5.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 PIRSF PIRSF000103 1 292 6.0E-78 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 SUPERFAMILY SSF48179 167 290 6.69E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 SUPERFAMILY SSF51735 5 166 2.5E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 Gene3D G3DSA:3.40.50.720 1 166 4.0E-50 T 11-10-2018 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 1.3E-31 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 Gene3D G3DSA:1.10.1040.10 167 292 1.3E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_22040 a5ccad90c937df5ad7f57ce21bc2f310 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 4.2E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL538_22770 b6aa9dc5a4e37a195094ea57fee35041 210 SUPERFAMILY SSF52833 45 207 6.23E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_22770 b6aa9dc5a4e37a195094ea57fee35041 210 Gene3D G3DSA:3.40.30.10 24 208 9.2E-40 T 11-10-2018 AL538_22770 b6aa9dc5a4e37a195094ea57fee35041 210 Pfam PF13462 Thioredoxin 49 198 1.7E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold AL538_22770 b6aa9dc5a4e37a195094ea57fee35041 210 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:3.40.50.300 1 203 3.3E-69 T 11-10-2018 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.4E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 3.6E-230 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF50447 205 301 1.47E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF50465 302 394 1.99E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.296 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.2E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.8E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:2.40.30.10 338 393 4.9E-29 T 11-10-2018 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.4E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 Gene3D G3DSA:2.40.30.10 206 334 9.7E-52 T 11-10-2018 AL538_07885 f9c87ef8d705b9dfacc5a214c43506b0 394 SUPERFAMILY SSF52540 6 219 4.98E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05745 7a314c525b92963cf1bc62cacb1241f3 269 Gene3D G3DSA:3.40.50.720 5 269 5.4E-110 T 11-10-2018 AL538_05745 7a314c525b92963cf1bc62cacb1241f3 269 SUPERFAMILY SSF69572 9 267 1.7E-64 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL538_05745 7a314c525b92963cf1bc62cacb1241f3 269 Pfam PF00899 ThiF family 23 198 4.2E-38 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL538_10590 ec41930ee0c7cf1f0946173a42f10afe 288 SUPERFAMILY SSF53448 1 287 4.96E-92 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10590 ec41930ee0c7cf1f0946173a42f10afe 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.2E-156 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL538_10590 ec41930ee0c7cf1f0946173a42f10afe 288 Gene3D G3DSA:3.90.550.10 1 288 3.4E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10590 ec41930ee0c7cf1f0946173a42f10afe 288 Pfam PF00483 Nucleotidyl transferase 2 238 4.5E-74 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 1.0E-9 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 3.7E-110 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Gene3D G3DSA:1.20.140.10 301 446 7.2E-91 T 11-10-2018 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 SUPERFAMILY SSF47203 301 453 6.28E-21 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 SUPERFAMILY SSF56645 60 296 1.02E-46 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 1.0E-14 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 2.1E-8 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Gene3D G3DSA:1.10.540.10 63 176 7.2E-91 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL538_16265 dab534ee84aea1c11e26d1cf650c5604 761 Gene3D G3DSA:2.40.110.10 177 300 7.2E-91 T 11-10-2018 AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 SUPERFAMILY SSF55073 283 432 2.28E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 124 7.3E-5 T 11-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 SUPERFAMILY SSF49785 38 215 1.19E-11 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 SMART SM00267 267 434 1.2E-50 T 11-10-2018 IPR000160 GGDEF domain AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 9.3E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 Gene3D G3DSA:3.30.70.270 264 434 5.7E-49 T 11-10-2018 AL538_16415 7ee99f0e5ae1e78e56f5ad04390e69ae 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 2.3E-39 T 11-10-2018 IPR000160 GGDEF domain AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 1.3E-237 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 SMART SM00448 4 115 3.4E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Gene3D G3DSA:3.40.50.300 132 312 6.6E-67 T 11-10-2018 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 SUPERFAMILY SSF52172 2 187 1.99E-43 T 11-10-2018 IPR011006 CheY-like superfamily AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.8E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Gene3D G3DSA:1.10.8.60 313 380 2.8E-17 T 11-10-2018 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Gene3D G3DSA:1.10.10.60 381 467 4.9E-26 T 11-10-2018 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 SMART SM00382 162 316 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 SUPERFAMILY SSF46689 382 466 6.72E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 11-10-2018 AL538_10180 e5d7a04accb5ddbeac2580403a6b9722 467 SUPERFAMILY SSF52540 141 385 1.31E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 Gene3D G3DSA:3.20.20.70 1 280 1.9E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 279 5.5E-79 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 SUPERFAMILY SSF51569 2 279 4.25E-85 T 11-10-2018 AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 PIRSF PIRSF001359 1 280 2.0E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_00170 9689c718b73cc31bdfa112145ef24b17 280 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 280 1.7E-92 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_28315 5b61e693dbe4f8f60bb69f662b60796f 47 Pfam PF04927 Seed maturation protein 6 46 2.8E-6 T 11-10-2018 IPR007011 Late embryogenesis abundant protein, SMP subgroup AL538_28315 5b61e693dbe4f8f60bb69f662b60796f 47 Gene3D G3DSA:1.10.246.160 3 47 9.3E-7 T 11-10-2018 IPR038213 IFI6/IFI27-like domain superfamily AL538_28315 5b61e693dbe4f8f60bb69f662b60796f 47 Pfam PF06140 Interferon-induced 6-16 family 10 43 3.4E-7 T 11-10-2018 IPR009311 Interferon alpha-inducible protein IFI6/IFI27-like GO:0016021 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 SMART SM00862 149 224 3.7E-7 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 SUPERFAMILY SSF46894 129 225 3.12E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 Gene3D G3DSA:3.40.50.2300 1 128 3.1E-33 T 11-10-2018 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 SMART SM00448 2 114 3.8E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 SUPERFAMILY SSF52172 1 133 1.99E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 Pfam PF00072 Response regulator receiver domain 4 115 3.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 Gene3D G3DSA:1.10.10.10 131 227 5.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25585 96e4fd54c6dd52c0d9179c3c4c8f2952 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 8.9E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 SUPERFAMILY SSF53300 933 1119 1.11E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 Pfam PF03160 Calx-beta domain 182 283 0.0044 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 Pfam PF03160 Calx-beta domain 53 155 0.0013 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 Pfam PF03160 Calx-beta domain 3 26 1.3 T 11-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 Gene3D G3DSA:2.150.10.10 1368 1522 1.2E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1395 1413 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 Gene3D G3DSA:3.40.50.410 934 1126 1.2E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1434 1521 6.7E-5 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 SUPERFAMILY SSF141072 195 306 3.66E-11 T 11-10-2018 IPR038081 CalX-like domain superfamily AL538_27420 3c2794065c68581d1ce34a2ac4c82147 1527 SUPERFAMILY SSF141072 66 193 7.32E-12 T 11-10-2018 IPR038081 CalX-like domain superfamily AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 Pfam PF01228 Glycine radical 630 746 3.4E-42 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 11-10-2018 AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 PIRSF PIRSF000379 8 765 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 SUPERFAMILY SSF51998 7 764 1.4E-278 T 11-10-2018 AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 765 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_04140 da200ec80fa40f484de06fd99c8e12cd 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 2.2E-195 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 PIRSF PIRSF006648 7 253 2.7E-25 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 8.4E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 8.4E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 8.4E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 8.4E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_06440 e0e70ebac6c3613cb3e68ac4595297dc 256 Pfam PF01061 ABC-2 type transporter 8 218 2.4E-40 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AL538_17630 0032d3c312af8f76425e59961dc90273 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 31 169 1.0E-30 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL538_17630 0032d3c312af8f76425e59961dc90273 170 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 62 72 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL538_17630 0032d3c312af8f76425e59961dc90273 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL538_17630 0032d3c312af8f76425e59961dc90273 170 SUPERFAMILY SSF49329 24 170 6.15E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL538_17630 0032d3c312af8f76425e59961dc90273 170 Gene3D G3DSA:2.60.40.200 20 170 3.4E-46 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AL538_15505 e2f1e00c6d5139a457989daa0062d9de 238 Pfam PF00929 Exonuclease 52 215 1.1E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_15505 e2f1e00c6d5139a457989daa0062d9de 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 49 226 5.8E-23 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_15505 e2f1e00c6d5139a457989daa0062d9de 238 Gene3D G3DSA:3.30.420.10 44 224 2.4E-35 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_15505 e2f1e00c6d5139a457989daa0062d9de 238 SMART SM00479 50 224 2.9E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_15505 e2f1e00c6d5139a457989daa0062d9de 238 SUPERFAMILY SSF53098 44 225 8.86E-38 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 11-10-2018 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Gene3D G3DSA:3.40.50.10930 4 321 5.7E-127 T 11-10-2018 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Gene3D G3DSA:3.40.50.300 339 811 3.1E-194 T 11-10-2018 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 SUPERFAMILY SSF52540 371 815 4.57E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Gene3D G3DSA:1.10.10.990 878 956 1.9E-21 T 11-10-2018 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 PIRSF PIRSF000980 1 1155 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Gene3D G3DSA:1.10.486.10 457 669 3.1E-194 T 11-10-2018 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 SUPERFAMILY SSF52980 838 1142 2.52E-77 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1117 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Gene3D G3DSA:1.10.10.160 79 187 5.7E-127 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL538_05780 30f82d538b837e685eae30659b7e229d 1158 SUPERFAMILY SSF52540 2 351 3.03E-125 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05780 30f82d538b837e685eae30659b7e229d 1158 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1149 21.106 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 Gene3D G3DSA:3.20.20.150 10 294 1.4E-112 T 11-10-2018 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 2.1E-42 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL538_11835 aa776edf9a156f371aa0c811877e948b 295 SUPERFAMILY SSF51658 12 286 1.17E-99 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_11835 aa776edf9a156f371aa0c811877e948b 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.04 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 287 1.3E-106 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL538_11835 aa776edf9a156f371aa0c811877e948b 295 SMART SM00518 12 288 3.9E-121 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 Gene3D G3DSA:3.40.1280.10 1 160 4.1E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.753 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.3E-109 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.3E-69 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 PIRSF PIRSF000386 1 246 9.6E-101 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 SUPERFAMILY SSF75217 1 244 4.97E-102 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_06545 055e83f748a94eed7e9cc68cf6805a79 247 Gene3D G3DSA:1.10.1270.20 161 247 2.1E-34 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AL538_23745 67948af2e8c933a32c2dd85fdb8ade4d 292 SUPERFAMILY SSF103481 40 138 6.15E-18 T 11-10-2018 AL538_23745 67948af2e8c933a32c2dd85fdb8ade4d 292 Pfam PF00892 EamA-like transporter family 150 280 2.3E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_23745 67948af2e8c933a32c2dd85fdb8ade4d 292 Pfam PF00892 EamA-like transporter family 4 135 1.5E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_23745 67948af2e8c933a32c2dd85fdb8ade4d 292 SUPERFAMILY SSF103481 185 283 3.66E-14 T 11-10-2018 AL538_08240 4a838a48a81fe55e378bac77aa73bd0c 369 SUPERFAMILY SSF51261 136 366 1.52E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_08240 4a838a48a81fe55e378bac77aa73bd0c 369 Gene3D G3DSA:2.70.70.10 228 368 1.2E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_08240 4a838a48a81fe55e378bac77aa73bd0c 369 Pfam PF01551 Peptidase family M23 269 362 1.9E-24 T 11-10-2018 IPR016047 Peptidase M23 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Pfam PF00270 DEAD/DEAH box helicase 135 281 4.1E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 SMART SM00487 123 307 2.3E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 SMART SM00490 351 451 6.3E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Gene3D G3DSA:1.20.120.1080 495 597 6.1E-18 T 11-10-2018 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Pfam PF00271 Helicase conserved C-terminal domain 336 450 1.9E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Pfam PF11898 Domain of unknown function (DUF3418) 759 1343 1.5E-229 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Pfam PF04408 Helicase associated domain (HA2) 513 604 4.7E-18 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 SMART SM00382 140 431 3.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 62 1343 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Gene3D G3DSA:3.40.50.300 76 300 3.3E-78 T 11-10-2018 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 669 745 6.7E-23 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 SMART SM00847 511 606 3.5E-36 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 Gene3D G3DSA:3.40.50.300 301 468 1.9E-55 T 11-10-2018 AL538_16720 54d4792fb67b721ce7a61d9eb7e77dbd 1345 SUPERFAMILY SSF52540 122 647 3.92E-116 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 1.0E-48 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 2.6E-36 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 Gene3D G3DSA:3.10.129.10 2 137 2.1E-40 T 11-10-2018 AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 SUPERFAMILY SSF54637 6 133 1.96E-39 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 Pfam PF03061 Thioesterase superfamily 22 107 1.3E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL538_14940 724fba6a572070ef166ba6bc9efd5758 139 PIRSF PIRSF003230 2 138 8.4E-46 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 1.1E-202 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 11-10-2018 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 SUPERFAMILY SSF51998 4 757 5.95E-286 T 11-10-2018 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_14660 df55f393bd69536c99bddf7eb3415fdd 758 PIRSF PIRSF000379 5 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 Gene3D G3DSA:1.10.10.60 1021 1132 3.3E-25 T 11-10-2018 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1079 1120 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 SUPERFAMILY SSF63829 258 456 4.58E-13 T 11-10-2018 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 Gene3D G3DSA:3.30.565.10 858 995 8.1E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 Pfam PF12833 Helix-turn-helix domain 1049 1123 1.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 SMART SM00342 1042 1124 3.4E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 Gene3D G3DSA:2.130.10.10 96 367 5.1E-18 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 Gene3D G3DSA:2.130.10.10 388 625 5.4E-23 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1093 1108 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1108 1124 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_13795 9c4729e17e57a75cd906be4542894ea3 1133 SUPERFAMILY SSF46689 1078 1123 4.93E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 2.1E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 SUPERFAMILY SSF52518 1 179 2.43E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 SUPERFAMILY SSF52467 185 341 5.58E-54 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Gene3D G3DSA:3.40.50.970 1 174 7.3E-67 T 11-10-2018 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 1.3E-39 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Gene3D G3DSA:3.40.50.1220 179 349 1.9E-51 T 11-10-2018 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 SUPERFAMILY SSF52518 358 545 1.02E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.1E-209 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Gene3D G3DSA:3.40.50.970 350 548 1.8E-66 T 11-10-2018 AL538_09535 2b09fb1b29d62fbbb055c011b612ea53 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 1.2E-48 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 Gene3D G3DSA:2.40.50.100 58 201 1.4E-96 T 11-10-2018 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 283 8.2E-15 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_22715 f4a927ee94246961be7839ff46845d7a 375 Gene3D G3DSA:2.40.420.20 297 365 1.4E-96 T 11-10-2018 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 Gene3D G3DSA:1.10.287.470 93 166 1.4E-96 T 11-10-2018 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 4.9E-82 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 Gene3D G3DSA:2.40.30.170 47 296 1.4E-96 T 11-10-2018 AL538_22715 f4a927ee94246961be7839ff46845d7a 375 SUPERFAMILY SSF111369 49 290 7.06E-62 T 11-10-2018 AL538_21595 7c07386cf8c3f7df0c0dc63176e5d7d4 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL538_21595 7c07386cf8c3f7df0c0dc63176e5d7d4 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 2.1E-53 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL538_21595 7c07386cf8c3f7df0c0dc63176e5d7d4 239 Gene3D G3DSA:3.10.200.10 22 237 1.0E-84 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL538_21595 7c07386cf8c3f7df0c0dc63176e5d7d4 239 SMART SM01057 23 239 1.6E-98 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL538_21595 7c07386cf8c3f7df0c0dc63176e5d7d4 239 SUPERFAMILY SSF51069 22 236 7.33E-76 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL538_12095 22dc43a7011735053480c65add368ac7 392 SUPERFAMILY SSF53850 109 295 6.3E-56 T 11-10-2018 AL538_12095 22dc43a7011735053480c65add368ac7 392 Gene3D G3DSA:3.30.70.260 295 383 1.1E-24 T 11-10-2018 AL538_12095 22dc43a7011735053480c65add368ac7 392 Gene3D G3DSA:1.20.59.10 3 112 1.0E-30 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12095 22dc43a7011735053480c65add368ac7 392 Pfam PF01817 Chorismate mutase type II 12 91 2.9E-16 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12095 22dc43a7011735053480c65add368ac7 392 SUPERFAMILY SSF55021 284 381 5.36E-26 T 11-10-2018 AL538_12095 22dc43a7011735053480c65add368ac7 392 Gene3D G3DSA:3.40.190.10 193 278 6.9E-55 T 11-10-2018 AL538_12095 22dc43a7011735053480c65add368ac7 392 SMART SM00830 12 93 6.2E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12095 22dc43a7011735053480c65add368ac7 392 Gene3D G3DSA:3.40.190.10 113 287 6.9E-55 T 11-10-2018 AL538_12095 22dc43a7011735053480c65add368ac7 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 3.5E-27 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AL538_12095 22dc43a7011735053480c65add368ac7 392 SUPERFAMILY SSF48600 7 95 1.41E-18 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12095 22dc43a7011735053480c65add368ac7 392 Pfam PF00800 Prephenate dehydratase 110 291 2.5E-60 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL538_12095 22dc43a7011735053480c65add368ac7 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL538_12095 22dc43a7011735053480c65add368ac7 392 PIRSF PIRSF001500 1 384 4.0E-141 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL538_12095 22dc43a7011735053480c65add368ac7 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AL538_26235 02d1d1b76e60784c0839dedfbdc0c942 247 Pfam PF03591 AzlC protein 25 163 1.7E-35 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease AL538_21730 3201b5a7cca84048b00c92b83153d067 179 SUPERFAMILY SSF158442 11 122 7.98E-22 T 11-10-2018 IPR023380 DsbB-like superfamily AL538_21730 3201b5a7cca84048b00c92b83153d067 179 Pfam PF02600 Disulfide bond formation protein DsbB 9 90 7.0E-14 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL538_21730 3201b5a7cca84048b00c92b83153d067 179 Gene3D G3DSA:1.20.1550.10 3 97 1.5E-12 T 11-10-2018 IPR023380 DsbB-like superfamily AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 Pfam PF12849 PBP superfamily domain 19 305 5.0E-65 T 11-10-2018 IPR024370 PBP domain AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 Gene3D G3DSA:3.40.190.10 23 324 1.9E-120 T 11-10-2018 AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 PIRSF PIRSF002756 2 335 6.9E-105 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 SUPERFAMILY SSF53850 22 333 2.17E-95 T 11-10-2018 AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 23 332 4.8E-114 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AL538_17180 6a7468d4916f44c5f465a9fbaa504508 344 Gene3D G3DSA:3.40.190.10 97 277 1.9E-120 T 11-10-2018 AL538_11955 25e386d83803fd04f7c6d30fa42dbf72 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 8.6E-83 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL538_11955 25e386d83803fd04f7c6d30fa42dbf72 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 4.7E-90 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL538_11955 25e386d83803fd04f7c6d30fa42dbf72 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.107 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL538_11955 25e386d83803fd04f7c6d30fa42dbf72 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 SUPERFAMILY SSF46626 54 201 1.07E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 81 1.7E-7 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 PRINTS PR00605 Class IC cytochrome C signature 264 286 4.7E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 PRINTS PR00605 Class IC cytochrome C signature 132 143 4.7E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 SUPERFAMILY SSF46626 459 565 6.03E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Gene3D G3DSA:1.10.760.10 289 413 5.2E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 SUPERFAMILY SSF46626 211 290 8.42E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Gene3D G3DSA:1.10.760.10 102 287 1.4E-54 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Gene3D G3DSA:1.10.760.10 581 697 3.9E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 SUPERFAMILY SSF46626 591 700 2.15E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Gene3D G3DSA:1.10.760.10 177 266 1.4E-54 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 589 669 5.5E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 211 286 2.4E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 123 196 1.7E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Pfam PF00034 Cytochrome c 305 403 1.5E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 Gene3D G3DSA:1.20.58.1490 1 92 3.8E-19 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AL538_23610 4f3a0f7b26d1f4182dac279b68e8ef34 718 SUPERFAMILY SSF46626 301 423 4.46E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_25695 1a0d84003d1334f57c4d051abe494c25 302 Gene3D G3DSA:3.40.50.1980 25 280 3.6E-89 T 11-10-2018 AL538_25695 1a0d84003d1334f57c4d051abe494c25 302 Pfam PF01497 Periplasmic binding protein 41 275 7.6E-21 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_25695 1a0d84003d1334f57c4d051abe494c25 302 SUPERFAMILY SSF53807 19 282 1.18E-60 T 11-10-2018 AL538_25695 1a0d84003d1334f57c4d051abe494c25 302 Gene3D G3DSA:3.40.50.1980 171 274 3.6E-89 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 SUPERFAMILY SSF54862 454 553 6.91E-26 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 2.8E-47 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 Gene3D G3DSA:3.30.70.20 455 548 8.0E-36 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 6.3E-7 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 SUPERFAMILY SSF51905 3 452 3.72E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.5E-6 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 2.5E-6 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 SUPERFAMILY SSF54373 213 310 2.79E-32 T 11-10-2018 AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 Gene3D G3DSA:3.50.50.60 7 386 1.5E-183 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25355 fb40f606358e5f4214413a6d543a3b65 553 Gene3D G3DSA:3.30.9.90 80 454 1.5E-183 T 11-10-2018 AL538_17750 635b379d3b17d948a1545818cf6bad3a 146 SUPERFAMILY SSF55804 1 144 7.19E-30 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_17750 635b379d3b17d948a1545818cf6bad3a 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 2.0E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_17750 635b379d3b17d948a1545818cf6bad3a 146 Gene3D G3DSA:3.40.930.10 1 145 9.6E-32 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_04545 e23879feabf213e23596a669f9220544 227 SUPERFAMILY SSF51735 1 197 1.01E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04545 e23879feabf213e23596a669f9220544 227 Gene3D G3DSA:3.40.50.720 1 220 8.5E-21 T 11-10-2018 AL538_04545 e23879feabf213e23596a669f9220544 227 Pfam PF00106 short chain dehydrogenase 7 190 2.4E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03185 60a754db3d480c422d84b09c61c823f0 177 SUPERFAMILY SSF52833 44 172 5.25E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_03185 60a754db3d480c422d84b09c61c823f0 177 Pfam PF08534 Redoxin 42 158 9.4E-16 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_03185 60a754db3d480c422d84b09c61c823f0 177 Gene3D G3DSA:3.40.30.10 26 174 2.1E-32 T 11-10-2018 AL538_03185 60a754db3d480c422d84b09c61c823f0 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 42 169 3.2E-41 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL538_04110 49e3f66e115900043fa976390b51bf47 329 Gene3D G3DSA:3.20.20.70 2 329 6.1E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_04110 49e3f66e115900043fa976390b51bf47 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.9E-39 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04110 49e3f66e115900043fa976390b51bf47 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.859 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04110 49e3f66e115900043fa976390b51bf47 329 SMART SM00729 14 219 1.0E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_04110 49e3f66e115900043fa976390b51bf47 329 Pfam PF04055 Radical SAM superfamily 19 181 2.3E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_04110 49e3f66e115900043fa976390b51bf47 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 6.0E-105 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04110 49e3f66e115900043fa976390b51bf47 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.8E-8 T 11-10-2018 AL538_04110 49e3f66e115900043fa976390b51bf47 329 SUPERFAMILY SSF102114 6 289 2.62E-69 T 11-10-2018 AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.7E-33 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 Pfam PF01478 Type IV leader peptidase family 135 244 4.2E-26 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 Gene3D G3DSA:1.20.120.1220 125 283 4.4E-5 T 11-10-2018 AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 3.2E-30 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 3.2E-30 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 3.2E-30 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL538_06520 ee7c606b90a55c9745618a9993b08dbb 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 3.2E-30 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL538_24800 52d8b72f0dbdf14d2ae07152fd62df55 180 Gene3D G3DSA:3.40.50.300 1 129 2.2E-12 T 11-10-2018 AL538_24800 52d8b72f0dbdf14d2ae07152fd62df55 180 SUPERFAMILY SSF52540 2 108 1.14E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.9E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.9E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.9E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 SUPERFAMILY SSF46785 9 141 3.05E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 Pfam PF01047 MarR family 36 89 2.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 SMART SM00347 25 125 2.0E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 Gene3D G3DSA:1.10.10.10 1 144 9.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16800 c8889029e24c5f2b98be07d55e60a35c 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL538_15970 f3364e95132baafcaed317047c2121a1 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 7.7E-44 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_15970 f3364e95132baafcaed317047c2121a1 320 SUPERFAMILY SSF161098 70 298 1.23E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15970 f3364e95132baafcaed317047c2121a1 320 Gene3D G3DSA:1.10.3720.10 69 308 4.7E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL538_21090 27645f9cb1428b4a99b57f83381683ca 905 PIRSF PIRSF035905 1 903 4.1E-217 T 11-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AL538_21090 27645f9cb1428b4a99b57f83381683ca 905 Pfam PF10101 Predicted membrane protein (DUF2339) 141 892 4.7E-101 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AL538_14080 bb87256572ad1fb6e68dd0e330b12b68 119 PIRSF PIRSF030962 1 119 3.6E-47 T 11-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_14080 bb87256572ad1fb6e68dd0e330b12b68 119 SUPERFAMILY SSF54637 16 104 1.57E-14 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_14080 bb87256572ad1fb6e68dd0e330b12b68 119 Gene3D G3DSA:3.10.129.10 3 119 7.5E-33 T 11-10-2018 AL538_26785 f5066d18958a3857c5b2aeff818ba279 171 SUPERFAMILY SSF55729 4 170 7.62E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_26785 f5066d18958a3857c5b2aeff818ba279 171 Gene3D G3DSA:3.40.630.30 1 171 1.0E-32 T 11-10-2018 AL538_26785 f5066d18958a3857c5b2aeff818ba279 171 Pfam PF00583 Acetyltransferase (GNAT) family 37 145 9.6E-13 T 11-10-2018 IPR000182 GNAT domain AL538_12970 b3e6b354aefda96f38911b677e14b8b2 258 PIRSF PIRSF029037 1 258 3.1E-116 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL538_12970 b3e6b354aefda96f38911b677e14b8b2 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.3E-114 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Gene3D G3DSA:3.30.70.270 467 624 1.7E-43 T 11-10-2018 AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 618 7.1E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SMART SM00086 412 454 0.0027 T 11-10-2018 IPR001610 PAC motif AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Gene3D G3DSA:3.30.450.20 340 466 3.0E-21 T 11-10-2018 AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SUPERFAMILY SSF55785 352 462 2.39E-19 T 11-10-2018 IPR035965 PAS domain superfamily AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SUPERFAMILY SSF103190 37 206 1.57E-50 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Gene3D G3DSA:1.20.5.170 26 72 5.9E-25 T 11-10-2018 AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Pfam PF13426 PAS domain 352 453 2.0E-10 T 11-10-2018 IPR000014 PAS domain AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 2.9E-14 T 11-10-2018 IPR000014 PAS domain AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 615 3.2E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Gene3D G3DSA:3.30.450.20 73 206 3.1E-43 T 11-10-2018 AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SMART SM00267 454 619 1.0E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SUPERFAMILY SSF103190 207 298 7.69E-24 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 SUPERFAMILY SSF55073 470 619 3.22E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_11280 d8382544cbf6fea3480e81a39f8cb535 626 Gene3D G3DSA:3.30.450.20 207 302 9.9E-36 T 11-10-2018 AL538_00120 1f43e89e4d1113cd0c382524bfc7ba03 391 SMART SM00283 126 387 5.5E-48 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00120 1f43e89e4d1113cd0c382524bfc7ba03 391 SUPERFAMILY SSF58104 79 388 1.31E-62 T 11-10-2018 AL538_00120 1f43e89e4d1113cd0c382524bfc7ba03 391 Gene3D G3DSA:1.10.287.950 62 388 1.3E-57 T 11-10-2018 AL538_00120 1f43e89e4d1113cd0c382524bfc7ba03 391 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 188 353 5.7E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 SMART SM00220 91 373 1.5E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 SUPERFAMILY SSF56112 88 338 1.32E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 Gene3D G3DSA:3.30.200.20 79 172 4.5E-25 T 11-10-2018 AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 218 230 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 Gene3D G3DSA:1.10.510.10 173 362 1.1E-31 T 11-10-2018 AL538_24945 dec899d4c04ded13a07723f5608f5b94 714 Pfam PF00069 Protein kinase domain 91 337 2.9E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.70.1320 137 332 4.3E-230 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.2090.10 701 788 4.3E-230 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82866 784 1004 1.57E-43 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82693 41 134 4.53E-17 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82714 185 271 5.89E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:1.20.1640.10 11 505 4.3E-230 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 1.2E-152 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82866 298 495 7.85E-33 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82693 550 600 5.23E-7 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.70.1430 41 796 4.3E-230 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82693 139 326 1.02E-14 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.6E-19 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.70.1440 650 846 4.3E-230 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.2090.10 180 274 4.3E-230 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 SUPERFAMILY SSF82714 707 781 3.4E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:1.20.1640.10 506 998 4.3E-230 T 11-10-2018 AL538_21740 c6bdf604b14eb253003275215d00eac0 1018 Gene3D G3DSA:3.30.70.1430 551 649 4.3E-230 T 11-10-2018 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 6.2E-125 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Gene3D G3DSA:3.40.50.720 1 208 9.3E-87 T 11-10-2018 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 7.4E-17 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.5E-25 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 SUPERFAMILY SSF48179 210 341 6.46E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.944 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Gene3D G3DSA:1.10.1040.10 209 494 1.4E-120 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 SUPERFAMILY SSF48179 348 487 9.18E-43 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.2E-59 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AL538_09830 9dbe9d38749223e3025062aaa0b94300 494 SUPERFAMILY SSF51735 29 209 1.47E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_19685 db39498bcaa41a44b4327f79b3edb2cd 315 Gene3D G3DSA:3.40.1190.20 1 307 1.6E-80 T 11-10-2018 IPR029056 Ribokinase-like AL538_19685 db39498bcaa41a44b4327f79b3edb2cd 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_19685 db39498bcaa41a44b4327f79b3edb2cd 315 Pfam PF00294 pfkB family carbohydrate kinase 1 304 1.1E-64 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_19685 db39498bcaa41a44b4327f79b3edb2cd 315 SUPERFAMILY SSF53613 1 308 8.73E-74 T 11-10-2018 IPR029056 Ribokinase-like AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 SUPERFAMILY SSF48179 494 593 2.13E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Gene3D G3DSA:3.90.226.10 1 308 5.0E-99 T 11-10-2018 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 SUPERFAMILY SSF51735 310 491 3.7E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 SUPERFAMILY SSF52096 3 302 1.16E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.116 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Gene3D G3DSA:1.10.1040.50 497 698 1.7E-70 T 11-10-2018 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 217 5.1E-42 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Gene3D G3DSA:3.40.50.720 310 496 4.7E-57 T 11-10-2018 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 SUPERFAMILY SSF48179 610 704 2.98E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 2.8E-53 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 9.2E-25 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 691 4.3E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_04905 a1631017807e40bb750d7106e47b1ea2 704 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 SUPERFAMILY SSF51569 3 201 1.08E-66 T 11-10-2018 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.0E-73 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 Gene3D G3DSA:3.20.20.70 1 203 9.1E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 4.3E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_09990 7faccd4dc858705fa9e51cf79df004fd 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Pfam PF13533 Biotin-lipoyl like 71 120 5.4E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Gene3D G3DSA:2.40.420.20 307 371 2.6E-48 T 11-10-2018 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Gene3D G3DSA:2.40.30.170 60 306 2.6E-48 T 11-10-2018 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Gene3D G3DSA:1.10.287.470 106 180 2.6E-48 T 11-10-2018 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 373 1.9E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Gene3D G3DSA:2.40.50.100 69 214 2.6E-48 T 11-10-2018 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 Pfam PF13437 HlyD family secretion protein 184 293 6.5E-10 T 11-10-2018 AL538_21630 055b64d68ebaad6e399d37dd24cc11b5 385 SUPERFAMILY SSF111369 61 237 4.18E-21 T 11-10-2018 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 3.1E-151 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 4.1E-23 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 8.3E-19 T 11-10-2018 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.321 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 SUPERFAMILY SSF54862 165 308 2.05E-18 T 11-10-2018 AL538_08120 6e7b30c4f5cbf1acdb252ddf9dcec509 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 Gene3D G3DSA:1.20.1050.90 121 298 4.4E-82 T 11-10-2018 AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 98.637 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 9.5E-120 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.9E-37 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 SUPERFAMILY SSF52540 1 343 1.19E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AL538_09700 a8f06501d5a89d81c32ca719388f3891 357 Gene3D G3DSA:3.40.50.300 8 332 4.4E-82 T 11-10-2018 AL538_04165 f4b591ac8f155e7a1dbf430683ed66bc 212 PIRSF PIRSF006091 1 205 2.3E-77 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL538_04165 f4b591ac8f155e7a1dbf430683ed66bc 212 Pfam PF04205 FMN-binding domain 100 189 2.9E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_04165 f4b591ac8f155e7a1dbf430683ed66bc 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 5.0E-64 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL538_04165 f4b591ac8f155e7a1dbf430683ed66bc 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.737 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AL538_04165 f4b591ac8f155e7a1dbf430683ed66bc 212 SMART SM00900 100 192 1.0E-32 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_11400 0ebec52e44a06e88e7e2b9d21dff56f1 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.133 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL538_11400 0ebec52e44a06e88e7e2b9d21dff56f1 203 SMART SM01207 10 185 1.5E-83 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL538_11400 0ebec52e44a06e88e7e2b9d21dff56f1 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 7.7E-50 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL538_11400 0ebec52e44a06e88e7e2b9d21dff56f1 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 5.3E-74 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 Gene3D G3DSA:3.40.50.10210 50 328 3.4E-120 T 11-10-2018 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 Gene3D G3DSA:1.10.1610.10 12 345 3.4E-120 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.426 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2 345 3.2E-128 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 SUPERFAMILY SSF52733 2 346 4.32E-111 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL538_01955 e2ad05ae37204230dfc65c73308984fe 347 Pfam PF02277 Phosphoribosyltransferase 2 345 1.5E-125 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 AL538_25855 9679f0040907e0d772153e5fcd4abc81 455 Pfam PF01957 NfeD-like C-terminal, partner-binding 313 450 9.2E-35 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AL538_25855 9679f0040907e0d772153e5fcd4abc81 455 Gene3D G3DSA:2.40.50.140 382 455 4.1E-13 T 11-10-2018 AL538_25855 9679f0040907e0d772153e5fcd4abc81 455 SUPERFAMILY SSF141322 386 449 3.14E-11 T 11-10-2018 AL538_25855 9679f0040907e0d772153e5fcd4abc81 455 SUPERFAMILY SSF52096 8 214 1.18E-25 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_25855 9679f0040907e0d772153e5fcd4abc81 455 Gene3D G3DSA:3.90.226.10 16 264 5.3E-58 T 11-10-2018 AL538_08260 c186afa4336669b82f48206ae02b140f 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 7.9E-128 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL538_08260 c186afa4336669b82f48206ae02b140f 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.658 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AL538_08260 c186afa4336669b82f48206ae02b140f 323 SUPERFAMILY SSF55681 11 320 1.87E-80 T 11-10-2018 AL538_08260 c186afa4336669b82f48206ae02b140f 323 Gene3D G3DSA:3.30.930.10 1 322 6.8E-109 T 11-10-2018 AL538_08260 c186afa4336669b82f48206ae02b140f 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 11 319 2.2E-44 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 Pfam PF14821 Threonine synthase N terminus 8 78 4.5E-8 T 11-10-2018 IPR029144 Threonine synthase, N-terminal AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 SUPERFAMILY SSF53686 1 424 5.11E-131 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 367 3.1E-23 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 TIGRFAM TIGR00260 thrC: threonine synthase 52 388 2.6E-113 T 11-10-2018 IPR004450 Threonine synthase-like AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 Gene3D G3DSA:3.40.50.1100 101 399 7.8E-138 T 11-10-2018 AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 Gene3D G3DSA:3.40.50.1100 83 392 7.8E-138 T 11-10-2018 AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL538_11820 c78bc1a53fd45b2a34b2798f2efc8636 426 Gene3D G3DSA:3.90.1380.10 1 79 3.8E-31 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 Gene3D G3DSA:3.40.50.720 2 199 3.0E-51 T 11-10-2018 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 3.0E-45 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PIRSF PIRSF000114 10 344 2.5E-95 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 Gene3D G3DSA:1.10.1040.10 201 345 8.2E-54 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 SUPERFAMILY SSF48179 191 343 2.27E-56 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 36.969 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 SUPERFAMILY SSF51735 16 190 2.54E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 7.3E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_08230 8bfc88c0eff4ff505bc43e597f0c9406 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.6E-52 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AL538_20835 db3988bf265d73fa3c2863e752bffd6e 106 Pfam PF14302 Domain of unknown function (DUF4377) 35 105 5.5E-18 T 11-10-2018 IPR025485 Domain of unknown function DUF4377 AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 SMART SM01091 352 434 2.2E-21 T 11-10-2018 IPR005170 Transporter-associated domain AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 Pfam PF01595 Domain of unknown function DUF21 16 205 6.5E-44 T 11-10-2018 IPR002550 CNNM, transmembrane domain AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 SUPERFAMILY SSF56176 353 431 2.26E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 SUPERFAMILY SSF54631 208 341 1.46E-22 T 11-10-2018 AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 Pfam PF03471 Transporter associated domain 353 432 1.6E-19 T 11-10-2018 IPR005170 Transporter-associated domain AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 Gene3D G3DSA:3.10.580.10 201 346 3.3E-36 T 11-10-2018 AL538_14185 dd11a43a82ff3a5ea71494b27f6f6d28 440 Gene3D G3DSA:3.30.465.10 347 433 1.4E-23 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL538_15965 0038d89ad16314e152b0a78854e6ef67 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.0E-15 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL538_15965 0038d89ad16314e152b0a78854e6ef67 295 Gene3D G3DSA:1.10.3720.10 85 291 2.6E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15965 0038d89ad16314e152b0a78854e6ef67 295 SUPERFAMILY SSF161098 89 276 3.92E-22 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15965 0038d89ad16314e152b0a78854e6ef67 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.6E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00382 113 266 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 SMART SM00994 13 52 1.0E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 11-10-2018 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 SMART SM01086 319 414 5.9E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 3.8E-209 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.304 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:1.10.8.60 318 426 2.6E-41 T 11-10-2018 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 8.1E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 SUPERFAMILY SSF52540 63 404 8.01E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 11-10-2018 AL538_14255 69bf009f892eaabaa730e68b1d531fff 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Pfam PF09308 LuxQ, periplasmic 41 278 9.2E-96 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SUPERFAMILY SSF103190 52 270 2.2E-70 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SMART SM00388 482 547 3.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:3.40.50.2300 722 855 3.6E-31 T 11-10-2018 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:3.30.450.220 51 207 8.2E-65 T 11-10-2018 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 709 3.9E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Pfam PF00072 Response regulator receiver domain 737 846 2.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 361 0.0 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:2.20.20.100 208 271 9.0E-38 T 11-10-2018 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SMART SM00448 735 847 7.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:1.10.287.130 472 547 1.4E-21 T 11-10-2018 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 547 6.1E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 664 9.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 650 9.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 689 9.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 708 9.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SUPERFAMILY SSF47384 470 548 6.47E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:3.30.450.20 345 471 2.1E-9 T 11-10-2018 AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SUPERFAMILY SSF55874 536 709 1.57E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SUPERFAMILY SSF52172 734 857 1.99E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 Gene3D G3DSA:3.30.565.10 548 715 3.8E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22575 e02994fc2cc04f4382d436e456abe2d8 859 SMART SM00387 594 711 2.5E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_27940 57729c8ce10df47e686fafc5768e49f9 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.8E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 SUPERFAMILY SSF52540 6 256 3.47E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Gene3D G3DSA:3.40.50.300 281 535 5.0E-69 T 11-10-2018 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Pfam PF00005 ABC transporter 304 455 1.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Gene3D G3DSA:3.40.50.300 4 280 2.1E-80 T 11-10-2018 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Pfam PF00005 ABC transporter 27 185 3.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 SMART SM00382 35 235 4.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17465 540ccef9b34cbff382fc0dd230478968 543 SMART SM00382 312 504 2.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17465 540ccef9b34cbff382fc0dd230478968 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 SUPERFAMILY SSF52540 295 526 2.3E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0015 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_17465 540ccef9b34cbff382fc0dd230478968 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 265 1.3E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.6E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.9E-153 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.88 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Gene3D G3DSA:3.40.50.12160 3 138 1.6E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AL538_13125 a86cf3dc33c482654e4706f1af544297 474 SUPERFAMILY SSF102114 123 373 2.75E-61 T 11-10-2018 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 SMART SM00729 147 367 3.3E-63 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Pfam PF01938 TRAM domain 379 440 3.6E-18 T 11-10-2018 IPR002792 TRAM domain AL538_13125 a86cf3dc33c482654e4706f1af544297 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 4.0E-199 T 11-10-2018 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Pfam PF04055 Radical SAM superfamily 151 325 2.9E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_13125 a86cf3dc33c482654e4706f1af544297 474 Gene3D G3DSA:3.80.30.20 145 378 1.2E-82 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Gene3D G3DSA:1.25.40.10 285 474 2.3E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Pfam PF14559 Tetratricopeptide repeat 352 417 4.1E-10 T 11-10-2018 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Pfam PF01435 Peptidase family M48 70 252 4.7E-27 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 483 39.701 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Gene3D G3DSA:3.30.2010.10 76 148 1.0E-6 T 11-10-2018 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 SUPERFAMILY SSF48452 311 455 1.22E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 Pfam PF13432 Tetratricopeptide repeat 295 341 0.0071 T 11-10-2018 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 SMART SM00028 341 374 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 SMART SM00028 307 340 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05270 41594951bfb2f03bb68903f4e4c13479 484 SMART SM00028 426 459 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_24360 efe26fe2601dbab2b712c5d927e81634 324 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 5 323 9.2E-101 T 11-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain AL538_23625 4d1c455f538a800e149798cb845f2eff 122 Gene3D G3DSA:1.10.760.10 35 118 1.0E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23625 4d1c455f538a800e149798cb845f2eff 122 SUPERFAMILY SSF46626 21 119 3.05E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23625 4d1c455f538a800e149798cb845f2eff 122 Pfam PF00034 Cytochrome c 45 116 1.6E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_03070 67f3fad798070e26df1d6c3968aebfad 213 SUPERFAMILY SSF56925 34 176 5.49E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_03070 67f3fad798070e26df1d6c3968aebfad 213 Pfam PF13505 Outer membrane protein beta-barrel domain 11 170 4.2E-11 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_03070 67f3fad798070e26df1d6c3968aebfad 213 Gene3D G3DSA:2.40.160.20 27 189 8.2E-8 T 11-10-2018 AL538_10430 d80f57aa58c8c5f41c13595ec7372598 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 168 8.7E-26 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_10430 d80f57aa58c8c5f41c13595ec7372598 827 SUPERFAMILY SSF56935 27 827 5.86E-103 T 11-10-2018 AL538_10430 d80f57aa58c8c5f41c13595ec7372598 827 Gene3D G3DSA:2.170.130.10 32 172 3.1E-38 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_10430 d80f57aa58c8c5f41c13595ec7372598 827 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 810 827 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_10430 d80f57aa58c8c5f41c13595ec7372598 827 Pfam PF00593 TonB dependent receptor 343 825 1.2E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_16345 26aca2a8b04b15e88d807f68721b18ef 390 Pfam PF13416 Bacterial extracellular solute-binding protein 37 292 1.4E-19 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_16345 26aca2a8b04b15e88d807f68721b18ef 390 SUPERFAMILY SSF53850 22 355 1.09E-37 T 11-10-2018 AL538_16345 26aca2a8b04b15e88d807f68721b18ef 390 Gene3D G3DSA:3.40.190.10 32 339 9.0E-46 T 11-10-2018 AL538_16345 26aca2a8b04b15e88d807f68721b18ef 390 Gene3D G3DSA:3.40.190.10 128 353 9.0E-46 T 11-10-2018 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Gene3D G3DSA:1.20.120.910 17 147 1.2E-35 T 11-10-2018 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.508 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF109635 8 106 6.8E-37 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 11-10-2018 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.9E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL538_06405 dc0d69dba4d3d6eb0e2ef11c1b9141c5 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 SUPERFAMILY SSF103473 18 445 6.67E-87 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 Pfam PF07690 Major Facilitator Superfamily 34 401 1.1E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 1.4E-151 T 11-10-2018 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 Gene3D G3DSA:1.20.1250.20 18 227 1.8E-58 T 11-10-2018 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 Gene3D G3DSA:1.20.1250.20 241 452 1.3E-62 T 11-10-2018 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 PIRSF PIRSF002808 5 452 3.7E-169 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL538_05825 7f2ef00eb044bb3bce7abfa3167d840b 455 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 1.2E-235 T 11-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AL538_16670 78229f91ec61a9ec03d7bdc05e5e9fae 146 SUPERFAMILY SSF158682 2 144 3.53E-30 T 11-10-2018 IPR029024 TerB-like AL538_16670 78229f91ec61a9ec03d7bdc05e5e9fae 146 Pfam PF05099 Tellurite resistance protein TerB 19 143 1.6E-39 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AL538_16670 78229f91ec61a9ec03d7bdc05e5e9fae 146 Gene3D G3DSA:1.10.3680.10 2 139 8.6E-21 T 11-10-2018 IPR029024 TerB-like AL538_19425 c99eac8730a0fb673d3d089f87d2b37d 324 Gene3D G3DSA:1.10.10.2830 153 274 9.8E-16 T 11-10-2018 AL538_19425 c99eac8730a0fb673d3d089f87d2b37d 324 SUPERFAMILY SSF110849 75 150 2.12E-8 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AL538_19425 c99eac8730a0fb673d3d089f87d2b37d 324 SMART SM00470 53 149 1.6E-8 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL538_19425 c99eac8730a0fb673d3d089f87d2b37d 324 Pfam PF02195 ParB-like nuclease domain 78 145 5.0E-8 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL538_19425 c99eac8730a0fb673d3d089f87d2b37d 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 225 7.8E-22 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL538_07890 8047e976679fa5789d975b71570d0c02 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_07890 8047e976679fa5789d975b71570d0c02 699 SMART SM00889 485 603 3.0E-76 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 11-10-2018 AL538_07890 8047e976679fa5789d975b71570d0c02 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Gene3D G3DSA:3.40.50.300 1 298 1.7E-115 T 11-10-2018 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Gene3D G3DSA:3.30.230.10 489 693 2.1E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_07890 8047e976679fa5789d975b71570d0c02 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_07890 8047e976679fa5789d975b71570d0c02 699 SUPERFAMILY SSF54211 484 604 7.08E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_07890 8047e976679fa5789d975b71570d0c02 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.1E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 11-10-2018 AL538_07890 8047e976679fa5789d975b71570d0c02 699 SUPERFAMILY SSF54980 608 695 4.03E-30 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_07890 8047e976679fa5789d975b71570d0c02 699 Pfam PF03764 Elongation factor G, domain IV 484 603 6.0E-49 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.0E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_07890 8047e976679fa5789d975b71570d0c02 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.838 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Gene3D G3DSA:2.40.30.10 299 405 3.7E-48 T 11-10-2018 AL538_07890 8047e976679fa5789d975b71570d0c02 699 Gene3D G3DSA:3.30.70.240 609 680 2.1E-92 T 11-10-2018 AL538_07890 8047e976679fa5789d975b71570d0c02 699 SUPERFAMILY SSF52540 6 288 3.71E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07890 8047e976679fa5789d975b71570d0c02 699 SUPERFAMILY SSF50447 271 409 1.92E-36 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_07890 8047e976679fa5789d975b71570d0c02 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_07890 8047e976679fa5789d975b71570d0c02 699 SMART SM00838 605 693 6.1E-57 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_07890 8047e976679fa5789d975b71570d0c02 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.1E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 Pfam PF00293 NUDIX domain 2 108 7.7E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 ProSitePatterns PS00893 Nudix box signature. 30 51 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 SUPERFAMILY SSF55811 5 113 2.03E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 Gene3D G3DSA:3.90.79.10 2 121 5.4E-24 T 11-10-2018 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 PRINTS PR00502 NUDIX hydrolase family signature 25 39 1.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_26780 f4ebe0ff7065e777f7fe9de6c44a81d0 132 PRINTS PR00502 NUDIX hydrolase family signature 39 54 1.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 Gene3D G3DSA:3.40.1410.10 89 224 4.6E-31 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 SUPERFAMILY SSF64288 56 231 2.36E-36 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 SMART SM00866 91 228 5.0E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 Pfam PF07702 UTRA domain 92 228 3.4E-32 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 Gene3D G3DSA:1.10.10.10 1 69 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 SMART SM00345 9 68 9.9E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 5.3E-91 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 SUPERFAMILY SSF46785 3 72 4.28E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_02145 3cd5d7fdf4bc2854a3cb03fe8f9194b3 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 SUPERFAMILY SSF50630 492 618 5.94E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 Pfam PF05618 Putative ATP-dependant zinc protease 500 620 9.0E-25 T 11-10-2018 AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 SUPERFAMILY SSF50630 357 483 5.45E-11 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 Gene3D G3DSA:2.40.70.10 216 333 1.8E-5 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 Gene3D G3DSA:2.40.70.10 490 612 3.8E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 Gene3D G3DSA:2.40.70.10 109 203 1.6E-9 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 SUPERFAMILY SSF50630 219 340 5.38E-18 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_10345 9d1842f5cf1ac9524b77720bd29c3f60 627 SUPERFAMILY SSF50630 42 211 2.48E-22 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_09160 2a9b4c5ae88f4719b2d44127b34e13aa 393 Pfam PF07219 HemY protein N-terminus 26 132 3.0E-27 T 11-10-2018 IPR010817 HemY, N-terminal AL538_09160 2a9b4c5ae88f4719b2d44127b34e13aa 393 Gene3D G3DSA:1.25.40.10 205 393 1.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_09160 2a9b4c5ae88f4719b2d44127b34e13aa 393 SUPERFAMILY SSF48452 85 293 1.57E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_09160 2a9b4c5ae88f4719b2d44127b34e13aa 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 4.3E-112 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AL538_09160 2a9b4c5ae88f4719b2d44127b34e13aa 393 SUPERFAMILY SSF48452 260 393 1.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_27330 362a8205b3e703349734cbaf986eb3d4 79 Pfam PF04325 Protein of unknown function (DUF465) 29 73 9.9E-12 T 11-10-2018 IPR007420 Protein of unknown function DUF465 AL538_27330 362a8205b3e703349734cbaf986eb3d4 79 Gene3D G3DSA:1.20.58.660 11 79 2.1E-15 T 11-10-2018 AL538_14440 7400da782d26379ae757410dd31bf20c 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 5.6E-24 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL538_14440 7400da782d26379ae757410dd31bf20c 441 SUPERFAMILY SSF53098 124 362 2.05E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_14440 7400da782d26379ae757410dd31bf20c 441 Pfam PF01609 Transposase DDE domain 128 351 1.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL538_02540 7400da782d26379ae757410dd31bf20c 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 5.6E-24 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL538_02540 7400da782d26379ae757410dd31bf20c 441 SUPERFAMILY SSF53098 124 362 2.05E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_02540 7400da782d26379ae757410dd31bf20c 441 Pfam PF01609 Transposase DDE domain 128 351 1.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL538_00525 7400da782d26379ae757410dd31bf20c 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 5.6E-24 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL538_00525 7400da782d26379ae757410dd31bf20c 441 SUPERFAMILY SSF53098 124 362 2.05E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_00525 7400da782d26379ae757410dd31bf20c 441 Pfam PF01609 Transposase DDE domain 128 351 1.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL538_25775 7400da782d26379ae757410dd31bf20c 441 Pfam PF13006 Insertion element 4 transposase N-terminal 16 107 5.6E-24 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal AL538_25775 7400da782d26379ae757410dd31bf20c 441 SUPERFAMILY SSF53098 124 362 2.05E-24 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_25775 7400da782d26379ae757410dd31bf20c 441 Pfam PF01609 Transposase DDE domain 128 351 1.2E-24 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AL538_00935 6e76b04a96f27ceb6f0ba39bb5c3184d 350 SUPERFAMILY SSF51569 8 347 5.46E-130 T 11-10-2018 AL538_00935 6e76b04a96f27ceb6f0ba39bb5c3184d 350 Gene3D G3DSA:3.20.20.70 1 350 2.6E-151 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_00935 6e76b04a96f27ceb6f0ba39bb5c3184d 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 8.7E-159 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_00935 6e76b04a96f27ceb6f0ba39bb5c3184d 350 Pfam PF00793 DAHP synthetase I family 44 338 8.1E-99 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_00935 6e76b04a96f27ceb6f0ba39bb5c3184d 350 PIRSF PIRSF001361 1 350 3.0E-154 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 Gene3D G3DSA:3.30.1490.70 31 190 1.4E-55 T 11-10-2018 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 Pfam PF14743 DNA ligase OB-like domain 212 277 6.0E-25 T 11-10-2018 IPR029319 DNA ligase, OB-like domain AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 Gene3D G3DSA:2.40.50.140 211 280 1.2E-7 T 11-10-2018 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 Gene3D G3DSA:3.30.470.30 51 151 1.4E-55 T 11-10-2018 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 Pfam PF01068 ATP dependent DNA ligase domain 45 198 6.6E-8 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 SUPERFAMILY SSF56091 21 198 2.88E-41 T 11-10-2018 AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 SUPERFAMILY SSF50249 173 277 3.88E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_00040 4c99c2b32a41ff78c7162bc00add14b7 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 8.7E-36 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AL538_26320 1ea7c15c1df8771bd2bb2260f46dacec 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 3.7E-77 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 Gene3D G3DSA:1.10.10.60 229 285 7.5E-16 T 11-10-2018 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 SUPERFAMILY SSF46689 232 283 1.79E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 Gene3D G3DSA:2.60.120.10 3 95 1.6E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 SUPERFAMILY SSF51215 22 99 9.15E-9 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 SMART SM00342 196 279 3.7E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 Pfam PF12833 Helix-turn-helix domain 202 280 1.1E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 Gene3D G3DSA:1.10.10.60 177 228 2.1E-9 T 11-10-2018 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 SUPERFAMILY SSF46689 180 227 3.34E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20620 c18910a86f3b77879d8a79a3de538e5a 288 Pfam PF02311 AraC-like ligand binding domain 21 135 2.2E-6 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 3.1E-6 T 11-10-2018 IPR000160 GGDEF domain AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SMART SM00897 28 214 8.4E-30 T 11-10-2018 IPR013702 FIST domain, N-terminal AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Gene3D G3DSA:3.30.70.270 399 568 3.2E-14 T 11-10-2018 AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Pfam PF10442 FIST C domain 215 338 2.3E-11 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SMART SM00052 590 828 2.2E-31 T 11-10-2018 IPR001633 EAL domain AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SUPERFAMILY SSF141868 598 825 1.06E-56 T 11-10-2018 IPR035919 EAL domain superfamily AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SMART SM01204 215 341 4.6E-16 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SMART SM00267 402 577 0.0043 T 11-10-2018 IPR000160 GGDEF domain AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Pfam PF08495 FIST N domain 30 212 2.8E-19 T 11-10-2018 IPR013702 FIST domain, N-terminal AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 SUPERFAMILY SSF55073 419 549 5.65E-8 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Gene3D G3DSA:3.20.20.450 594 827 9.1E-59 T 11-10-2018 IPR035919 EAL domain superfamily AL538_09100 4ddd285d73c212a613bc86fc54e64408 828 Pfam PF00563 EAL domain 598 824 1.9E-56 T 11-10-2018 IPR001633 EAL domain AL538_18530 b8cefe668c4d89946374db18f6ebc43b 96 Gene3D G3DSA:3.30.70.100 1 96 4.1E-27 T 11-10-2018 AL538_18530 b8cefe668c4d89946374db18f6ebc43b 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 1.6E-15 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL538_18530 b8cefe668c4d89946374db18f6ebc43b 96 SUPERFAMILY SSF54909 3 90 1.28E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_18685 02c4c63118a1d208d750764a8b0477de 103 Pfam PF07883 Cupin domain 44 101 8.8E-12 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL538_18685 02c4c63118a1d208d750764a8b0477de 103 Gene3D G3DSA:2.60.120.10 13 103 1.5E-38 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_18685 02c4c63118a1d208d750764a8b0477de 103 SUPERFAMILY SSF51182 1 102 2.32E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_04380 648ca7aeb4b5a80d41f0ed3e5bdd8432 245 Gene3D G3DSA:3.40.50.300 26 232 1.8E-5 T 11-10-2018 AL538_04380 648ca7aeb4b5a80d41f0ed3e5bdd8432 245 SUPERFAMILY SSF52540 9 195 3.79E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 11-10-2018 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 SUPERFAMILY SSF56719 30 520 2.09E-188 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Gene3D G3DSA:2.120.10.90 534 840 1.7E-127 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 SUPERFAMILY SSF101904 532 851 1.06E-113 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 SMART SM00434 11 498 2.2E-303 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Gene3D G3DSA:3.90.199.10 33 520 3.3E-237 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.687 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.3E-158 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.3E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 2.8E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.7E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.7E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.5E-16 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Gene3D G3DSA:3.30.1360.40 236 332 3.3E-237 T 11-10-2018 AL538_03225 e9970fe3b9b69b1d8d54751e0cbfc868 879 Gene3D G3DSA:1.10.268.10 369 492 3.3E-237 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_25415 9f596a83269fdaa5a3f0577649505279 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 7.8E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_25415 9f596a83269fdaa5a3f0577649505279 229 Gene3D G3DSA:1.10.3720.10 2 218 8.9E-46 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25415 9f596a83269fdaa5a3f0577649505279 229 SUPERFAMILY SSF161098 10 202 3.66E-37 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25415 9f596a83269fdaa5a3f0577649505279 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 2.4E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 Gene3D G3DSA:1.25.40.10 270 394 2.7E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 Pfam PF13181 Tetratricopeptide repeat 148 178 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 Gene3D G3DSA:1.25.40.10 23 105 6.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SUPERFAMILY SSF48452 212 386 8.18E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SMART SM00028 148 181 0.29 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SMART SM00028 357 390 36.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SMART SM00028 71 104 1.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SMART SM00028 291 321 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 Gene3D G3DSA:1.25.40.10 106 257 5.6E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10400 d45f519762ba7a4f48c845abf89d10da 404 SUPERFAMILY SSF48452 42 246 1.63E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_07440 caa6eef15078ba432a282debe3b81384 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 7.2E-57 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AL538_07440 caa6eef15078ba432a282debe3b81384 273 SUPERFAMILY SSF56317 3 263 1.31E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL538_07440 caa6eef15078ba432a282debe3b81384 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AL538_07440 caa6eef15078ba432a282debe3b81384 273 Gene3D G3DSA:3.60.110.10 1 268 8.9E-91 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL538_08360 db2b24997ec40e743b76002462c71b51 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 1.8E-25 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AL538_08360 db2b24997ec40e743b76002462c71b51 302 SUPERFAMILY SSF161111 8 207 2.75E-50 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_08360 db2b24997ec40e743b76002462c71b51 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 286 3.9E-69 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_08360 db2b24997ec40e743b76002462c71b51 302 Pfam PF01545 Cation efflux family 15 206 7.4E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_08360 db2b24997ec40e743b76002462c71b51 302 SUPERFAMILY SSF160240 210 287 2.35E-24 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AL538_08360 db2b24997ec40e743b76002462c71b51 302 Gene3D G3DSA:3.30.70.1350 207 290 1.2E-30 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AL538_08360 db2b24997ec40e743b76002462c71b51 302 Gene3D G3DSA:1.20.1510.10 8 206 5.3E-60 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_12890 47c49704d1922b5d10a554baf2a78099 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL538_12890 47c49704d1922b5d10a554baf2a78099 294 Pfam PF00348 Polyprenyl synthetase 29 270 1.7E-58 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL538_12890 47c49704d1922b5d10a554baf2a78099 294 SUPERFAMILY SSF48576 3 285 2.34E-85 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL538_12890 47c49704d1922b5d10a554baf2a78099 294 Gene3D G3DSA:1.10.600.10 1 294 9.9E-114 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL538_12890 47c49704d1922b5d10a554baf2a78099 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL538_05015 2fd44e430db093a0b2432c40a2e287a6 246 Gene3D G3DSA:1.10.287.500 55 189 1.9E-46 T 11-10-2018 AL538_05015 2fd44e430db093a0b2432c40a2e287a6 246 PIRSF PIRSF002884 13 246 2.0E-90 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL538_05015 2fd44e430db093a0b2432c40a2e287a6 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 7.5E-77 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AL538_05015 2fd44e430db093a0b2432c40a2e287a6 246 SUPERFAMILY SSF75708 26 245 1.96E-65 T 11-10-2018 AL538_24475 e782efc112d45ed8b4376799161a32af 210 Gene3D G3DSA:2.40.50.870 53 210 2.5E-34 T 11-10-2018 AL538_24475 e782efc112d45ed8b4376799161a32af 210 Pfam PF11736 Protein of unknown function (DUF3299) 24 206 6.9E-32 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 AL538_12050 39fc0958b822c85d86286ab55c2aed7a 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 292 5.0E-84 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AL538_12050 39fc0958b822c85d86286ab55c2aed7a 327 SUPERFAMILY SSF51445 2 286 3.16E-84 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_12050 39fc0958b822c85d86286ab55c2aed7a 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.02 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_12050 39fc0958b822c85d86286ab55c2aed7a 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AL538_12050 39fc0958b822c85d86286ab55c2aed7a 327 Gene3D G3DSA:3.20.20.300 1 327 8.2E-125 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AL538_02705 04904717919581b0eaef30eea4b941ab 116 Gene3D G3DSA:3.40.50.450 1 113 3.5E-7 T 11-10-2018 AL538_02705 04904717919581b0eaef30eea4b941ab 116 SUPERFAMILY SSF52309 3 86 7.02E-7 T 11-10-2018 AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 Gene3D G3DSA:3.30.70.270 411 572 4.3E-38 T 11-10-2018 AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 416 568 7.3E-29 T 11-10-2018 IPR000160 GGDEF domain AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 Gene3D G3DSA:3.30.450.20 143 248 4.2E-7 T 11-10-2018 AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 SMART SM00267 407 570 5.7E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 SUPERFAMILY SSF55073 420 569 1.96E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_20150 f31a490df55654e91eaef9e9d74153ee 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 416 566 6.7E-30 T 11-10-2018 IPR000160 GGDEF domain AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Pfam PF13374 Tetratricopeptide repeat 213 241 0.015 T 11-10-2018 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SUPERFAMILY SSF48452 175 282 6.6E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00267 466 638 1.5E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SUPERFAMILY SSF48452 94 153 3.19E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Gene3D G3DSA:1.25.40.10 93 287 2.2E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 250 283 0.021 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 290 323 0.73 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 330 363 0.66 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 210 243 44.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 92 125 76.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SMART SM00028 370 403 440.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Pfam PF13424 Tetratricopeptide repeat 249 319 2.6E-9 T 11-10-2018 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Gene3D G3DSA:1.25.40.10 292 427 1.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 476 635 2.8E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SUPERFAMILY SSF55073 482 635 3.06E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 632 7.5E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 SUPERFAMILY SSF48452 249 443 5.31E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17075 0f0462e32b147ba69934df4d2763a3ae 655 Gene3D G3DSA:3.30.70.270 471 640 6.1E-37 T 11-10-2018 AL538_10610 fc8a3cd35eabcebe5357c3ea312c3992 305 Gene3D G3DSA:3.90.550.10 7 261 7.6E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10610 fc8a3cd35eabcebe5357c3ea312c3992 305 Pfam PF00535 Glycosyl transferase family 2 12 173 1.5E-12 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_10610 fc8a3cd35eabcebe5357c3ea312c3992 305 SUPERFAMILY SSF53448 11 223 1.58E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 8.9E-119 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 Gene3D G3DSA:3.40.1690.10 217 358 3.3E-52 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 4.5E-119 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.8E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.8E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.8E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.8E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.8E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_21340 e505de5fe6525ce4c3602d5d4497249a 375 SUPERFAMILY SSF160544 244 351 6.54E-36 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_27000 50b5be1a85a716eb784a76b8b518c8a0 135 Pfam PF05036 Sporulation related domain 44 118 1.3E-12 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_27000 50b5be1a85a716eb784a76b8b518c8a0 135 SUPERFAMILY SSF110997 44 109 1.44E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_27000 50b5be1a85a716eb784a76b8b518c8a0 135 Gene3D G3DSA:3.30.70.1070 33 126 3.0E-20 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_01965 2495f5d693af5cee9f12eac45192ae3c 231 Gene3D G3DSA:3.40.50.720 2 231 1.2E-47 T 11-10-2018 AL538_01965 2495f5d693af5cee9f12eac45192ae3c 231 SUPERFAMILY SSF51735 6 222 2.97E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_01965 2495f5d693af5cee9f12eac45192ae3c 231 Pfam PF08732 HIM1 80 177 1.8E-9 T 11-10-2018 IPR014843 Protein Him1/Fmp52 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 Pfam PF00072 Response regulator receiver domain 9 116 1.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 SMART SM00862 149 223 1.8E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 2.4E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 SUPERFAMILY SSF46894 123 223 1.42E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 SUPERFAMILY SSF52172 4 131 2.85E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 Gene3D G3DSA:3.40.50.2300 1 124 7.0E-35 T 11-10-2018 AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 Gene3D G3DSA:1.10.10.10 125 226 6.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01730 6ce0f505633e31883b0b3f97e3b091e1 229 SMART SM00448 6 117 1.5E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00245 26ffcb1e363cb020746c6aca3efdac03 172 SUPERFAMILY SSF46894 10 101 7.94E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_00245 26ffcb1e363cb020746c6aca3efdac03 172 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 99 2.4E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_00245 26ffcb1e363cb020746c6aca3efdac03 172 Gene3D G3DSA:1.10.10.10 7 115 2.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_00245 26ffcb1e363cb020746c6aca3efdac03 172 SMART SM00862 24 99 1.2E-8 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_02490 2276a3d03979146aa49d7ddf56aafa94 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 6.6E-11 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL538_02490 2276a3d03979146aa49d7ddf56aafa94 96 SUPERFAMILY SSF143011 1 82 4.32E-23 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL538_02490 2276a3d03979146aa49d7ddf56aafa94 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 1.8E-13 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL538_02490 2276a3d03979146aa49d7ddf56aafa94 96 Gene3D G3DSA:3.30.2310.20 1 95 2.2E-29 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL538_06450 410a459ca94639bb064edc4df12f3c07 556 Pfam PF00916 Sulfate permease family 11 375 1.1E-85 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL538_06450 410a459ca94639bb064edc4df12f3c07 556 SUPERFAMILY SSF52091 439 541 3.53E-11 T 11-10-2018 IPR036513 STAS domain superfamily AL538_06450 410a459ca94639bb064edc4df12f3c07 556 Gene3D G3DSA:3.30.750.24 428 550 5.2E-14 T 11-10-2018 IPR036513 STAS domain superfamily AL538_06450 410a459ca94639bb064edc4df12f3c07 556 Pfam PF01740 STAS domain 440 533 7.9E-12 T 11-10-2018 IPR002645 STAS domain AL538_03375 dd9618546f17612bf52384843b289fb7 202 SUPERFAMILY SSF52317 2 192 7.94E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_03375 dd9618546f17612bf52384843b289fb7 202 Gene3D G3DSA:3.40.50.880 1 193 4.4E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.3E-5 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.3E-5 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.5E-34 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 3.0E-53 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03375 dd9618546f17612bf52384843b289fb7 202 Pfam PF00117 Glutamine amidotransferase class-I 6 186 7.4E-47 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.2E-13 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.2E-13 T 11-10-2018 AL538_03375 dd9618546f17612bf52384843b289fb7 202 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.2E-13 T 11-10-2018 AL538_16560 5b80ae36f7b41e1cb5bba507c9338fb9 374 Pfam PF13487 HD domain 273 304 5.2E-7 T 11-10-2018 AL538_16560 5b80ae36f7b41e1cb5bba507c9338fb9 374 SUPERFAMILY SSF55781 13 138 2.43E-7 T 11-10-2018 AL538_16560 5b80ae36f7b41e1cb5bba507c9338fb9 374 Gene3D G3DSA:3.30.450.40 10 155 1.1E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_16560 5b80ae36f7b41e1cb5bba507c9338fb9 374 Gene3D G3DSA:1.10.3210.10 157 368 3.0E-29 T 11-10-2018 AL538_16560 5b80ae36f7b41e1cb5bba507c9338fb9 374 SUPERFAMILY SSF109604 174 352 3.45E-13 T 11-10-2018 AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 Gene3D G3DSA:3.40.630.30 1 274 3.8E-112 T 11-10-2018 AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 Gene3D G3DSA:2.40.40.20 277 339 8.0E-6 T 11-10-2018 AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 SUPERFAMILY SSF55729 1 338 6.1E-129 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.3E-132 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 1.7E-136 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL538_08005 ba68df226f916ab3a9ba177c7f9aa098 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 6.4E-132 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 PIRSF PIRSF000804 1 366 8.1E-118 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 9.2E-109 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 SUPERFAMILY SSF55979 1 118 8.37E-31 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.6E-37 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Gene3D G3DSA:3.10.150.10 248 366 4.7E-39 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Gene3D G3DSA:3.10.150.10 1 122 2.5E-42 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 7.8E-36 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 SUPERFAMILY SSF55979 245 366 5.58E-36 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Gene3D G3DSA:3.10.150.10 124 247 4.1E-36 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 SUPERFAMILY SSF55979 126 244 3.38E-28 T 11-10-2018 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 SMART SM00480 17 362 1.6E-149 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AL538_09695 cff54f11ff4a1a5db69adce451deeac1 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.4E-38 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AL538_26755 dc991c99da07457ad760f5c64feaf79c 447 Pfam PF01618 MotA/TolQ/ExbB proton channel family 318 429 2.9E-25 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_26755 dc991c99da07457ad760f5c64feaf79c 447 PIRSF PIRSF037714 11 446 2.8E-83 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL538_12505 9275b6af1f32bb6d7ce68f95b0128695 491 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 20 482 1.9E-194 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AL538_12505 9275b6af1f32bb6d7ce68f95b0128695 491 Pfam PF01458 Uncharacterized protein family (UPF0051) 230 462 2.8E-66 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AL538_12505 9275b6af1f32bb6d7ce68f95b0128695 491 SUPERFAMILY SSF101960 41 488 7.45E-135 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AL538_27540 e6429df1e0bf3784c08a0360094b5c0d 44 Pfam PF11665 Protein of unknown function (DUF3265) 17 44 6.3E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_25865 fa160f760e00d37f5e7dc12c7456ee94 134 SUPERFAMILY SSF46458 4 131 1.38E-26 T 11-10-2018 IPR009050 Globin-like superfamily AL538_25865 fa160f760e00d37f5e7dc12c7456ee94 134 Gene3D G3DSA:1.10.490.10 1 131 1.5E-31 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AL538_13760 072941c8ff332f868765950abdbdfef9 941 SUPERFAMILY SSF52518 122 536 1.03E-87 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_13760 072941c8ff332f868765950abdbdfef9 941 SMART SM00861 594 787 1.5E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_13760 072941c8ff332f868765950abdbdfef9 941 Gene3D G3DSA:3.40.50.12470 557 803 3.5E-173 T 11-10-2018 AL538_13760 072941c8ff332f868765950abdbdfef9 941 SUPERFAMILY SSF52518 577 794 1.85E-52 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_13760 072941c8ff332f868765950abdbdfef9 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 3.9E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_13760 072941c8ff332f868765950abdbdfef9 941 Gene3D G3DSA:1.10.287.1150 85 167 1.2E-30 T 11-10-2018 AL538_13760 072941c8ff332f868765950abdbdfef9 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.6E-55 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL538_13760 072941c8ff332f868765950abdbdfef9 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL538_13760 072941c8ff332f868765950abdbdfef9 941 PIRSF PIRSF000157 1 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL538_13760 072941c8ff332f868765950abdbdfef9 941 Gene3D G3DSA:3.40.50.970 168 534 3.9E-145 T 11-10-2018 AL538_13760 072941c8ff332f868765950abdbdfef9 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 6.8E-14 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AL538_13760 072941c8ff332f868765950abdbdfef9 941 Gene3D G3DSA:3.40.50.11610 724 930 3.5E-173 T 11-10-2018 AL538_13760 072941c8ff332f868765950abdbdfef9 941 Pfam PF00676 Dehydrogenase E1 component 221 515 1.5E-48 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 SUPERFAMILY SSF46689 213 262 1.14E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 255 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 1.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 1.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 SMART SM00342 177 259 8.9E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 Gene3D G3DSA:1.10.10.60 158 264 1.7E-27 T 11-10-2018 AL538_25500 044a97373a41b59be9bc9c8bb76599bd 264 Pfam PF12833 Helix-turn-helix domain 183 260 4.8E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_26375 d401801fed7fc9612e6efff814230f71 644 Gene3D G3DSA:3.40.930.10 1 156 4.8E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_26375 d401801fed7fc9612e6efff814230f71 644 Pfam PF02378 Phosphotransferase system, EIIC 297 512 6.5E-9 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_26375 d401801fed7fc9612e6efff814230f71 644 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 4.4E-37 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_26375 d401801fed7fc9612e6efff814230f71 644 SUPERFAMILY SSF55804 1 150 1.96E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_26375 d401801fed7fc9612e6efff814230f71 644 Gene3D G3DSA:3.40.50.2300 157 267 1.9E-36 T 11-10-2018 AL538_26375 d401801fed7fc9612e6efff814230f71 644 SUPERFAMILY SSF52794 168 264 1.29E-31 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_26375 d401801fed7fc9612e6efff814230f71 644 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 3.0E-37 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL538_26375 d401801fed7fc9612e6efff814230f71 644 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 169 253 1.0E-25 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_26375 d401801fed7fc9612e6efff814230f71 644 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 260 2.3E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_26375 d401801fed7fc9612e6efff814230f71 644 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 287 626 3.6E-81 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_26375 d401801fed7fc9612e6efff814230f71 644 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 Gene3D G3DSA:3.30.70.20 2 103 1.8E-25 T 11-10-2018 AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 9.9E-17 T 11-10-2018 IPR022569 Ferredoxin, C-terminal AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 SUPERFAMILY SSF54862 3 96 1.22E-22 T 11-10-2018 AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL538_14485 1afdc8ad1ac7555a7918d2b87bd57e88 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AL538_07340 5da1632711d627c4e4cb76f3105ab78c 267 Pfam PF00005 ABC transporter 23 170 3.0E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07340 5da1632711d627c4e4cb76f3105ab78c 267 SUPERFAMILY SSF52540 6 238 1.3E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07340 5da1632711d627c4e4cb76f3105ab78c 267 Gene3D G3DSA:3.40.50.300 4 257 9.8E-68 T 11-10-2018 AL538_07340 5da1632711d627c4e4cb76f3105ab78c 267 SMART SM00382 31 237 3.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07340 5da1632711d627c4e4cb76f3105ab78c 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_03020 9afd9a99a8e175267235cb0e0a0450c3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL538_03020 9afd9a99a8e175267235cb0e0a0450c3 120 SUPERFAMILY SSF55620 1 118 5.56E-41 T 11-10-2018 AL538_03020 9afd9a99a8e175267235cb0e0a0450c3 120 Gene3D G3DSA:3.30.479.10 1 120 8.5E-50 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AL538_03020 9afd9a99a8e175267235cb0e0a0450c3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-35 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL538_03020 9afd9a99a8e175267235cb0e0a0450c3 120 PIRSF PIRSF006113 1 120 3.0E-53 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL538_04310 2a563848257b69478ba5d03099b06785 187 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04310 2a563848257b69478ba5d03099b06785 187 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04310 2a563848257b69478ba5d03099b06785 187 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04310 2a563848257b69478ba5d03099b06785 187 Pfam PF03466 LysR substrate binding domain 89 173 6.7E-14 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_04310 2a563848257b69478ba5d03099b06785 187 Gene3D G3DSA:1.10.10.10 1 90 3.4E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04310 2a563848257b69478ba5d03099b06785 187 SUPERFAMILY SSF46785 1 84 1.06E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_04310 2a563848257b69478ba5d03099b06785 187 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04310 2a563848257b69478ba5d03099b06785 187 SUPERFAMILY SSF53850 90 174 7.47E-13 T 11-10-2018 AL538_04310 2a563848257b69478ba5d03099b06785 187 Gene3D G3DSA:3.40.190.10 91 181 1.8E-13 T 11-10-2018 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 Gene3D G3DSA:3.40.50.2300 165 294 6.4E-74 T 11-10-2018 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 5.8E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 5.8E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 Gene3D G3DSA:3.40.50.2300 67 311 6.4E-74 T 11-10-2018 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 SUPERFAMILY SSF53822 67 334 3.34E-75 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 SUPERFAMILY SSF47413 8 56 1.21E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 SMART SM00354 7 77 2.2E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 5.0E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 Gene3D G3DSA:1.10.260.40 1 63 3.3E-17 T 11-10-2018 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 11-10-2018 AL538_18810 aad46a009e8474a8fd9012213c1f4905 340 Pfam PF13377 Periplasmic binding protein-like domain 175 332 9.5E-36 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Gene3D G3DSA:1.20.1060.30 668 779 9.4E-136 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Pfam PF04310 MukB N-terminal 2 227 4.9E-121 T 11-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 SUPERFAMILY SSF52540 26 224 1.27E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Gene3D G3DSA:1.20.58.850 621 831 9.4E-136 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.2E-14 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Gene3D G3DSA:1.20.58.850 583 853 9.4E-136 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Gene3D G3DSA:3.40.1140.10 1 227 1.5E-97 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Gene3D G3DSA:3.40.1140.10 1383 1469 1.5E-38 T 11-10-2018 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.92 T 11-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 Pfam PF16330 MukB hinge domain 647 811 1.3E-72 T 11-10-2018 IPR032520 MukB, hinge domain AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 SUPERFAMILY SSF52540 21 1434 6.51E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14860 274e8b3487470edddda09e19a7e35eef 1487 PIRSF PIRSF005246 1 1487 0.0 T 11-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 Pfam PF00271 Helicase conserved C-terminal domain 239 345 7.4E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 Gene3D G3DSA:3.40.50.300 218 428 1.8E-50 T 11-10-2018 AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 SMART SM00487 24 227 3.8E-53 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 Pfam PF00270 DEAD/DEAH box helicase 29 200 2.2E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 SMART SM00490 264 345 2.1E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 SUPERFAMILY SSF52540 77 364 1.92E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17325 e8f2a6183d36d061dfcbe5df22d19523 447 Gene3D G3DSA:3.40.50.300 1 216 2.6E-73 T 11-10-2018 AL538_03760 ceb97888f083c7ab110456581056f00c 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 6.2E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.8E-49 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL538_03760 ceb97888f083c7ab110456581056f00c 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 SMART SM00411 1 91 4.4E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 SUPERFAMILY SSF47729 1 91 2.21E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 31.013 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AL538_03760 ceb97888f083c7ab110456581056f00c 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 Gene3D G3DSA:4.10.520.10 40 94 1.4E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_03760 ceb97888f083c7ab110456581056f00c 94 Gene3D G3DSA:4.10.520.10 2 39 4.9E-12 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 8.3E-87 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 Gene3D G3DSA:3.40.1280.10 74 243 5.6E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 Gene3D G3DSA:2.40.240.20 1 70 9.2E-23 T 11-10-2018 AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 SUPERFAMILY SSF75217 75 242 2.79E-53 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 Pfam PF04452 RNA methyltransferase 19 236 1.5E-75 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 PIRSF PIRSF015601 2 242 1.4E-56 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AL538_06970 8171f1a221fcdb7a89b7443c14452188 243 SUPERFAMILY SSF88697 2 70 1.86E-17 T 11-10-2018 IPR015947 PUA-like superfamily AL538_09250 3caee378c2edf5d8d7191f4f9532d6be 304 SUPERFAMILY SSF103481 189 291 2.22E-9 T 11-10-2018 AL538_09250 3caee378c2edf5d8d7191f4f9532d6be 304 SUPERFAMILY SSF103481 50 146 9.55E-14 T 11-10-2018 AL538_09250 3caee378c2edf5d8d7191f4f9532d6be 304 Pfam PF00892 EamA-like transporter family 12 145 1.9E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_09250 3caee378c2edf5d8d7191f4f9532d6be 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 2.5E-87 T 11-10-2018 IPR004626 RarD protein GO:0005887 AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 Gene3D G3DSA:1.20.1050.10 89 222 2.5E-44 T 11-10-2018 AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 2.7E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 Gene3D G3DSA:3.40.30.10 7 83 5.2E-24 T 11-10-2018 AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 SUPERFAMILY SSF47616 89 220 2.56E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 SUPERFAMILY SSF52833 5 89 5.38E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_01650 6c4a76dd76f919605678e9a4ebb3d744 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 4.0E-81 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 Gene3D G3DSA:3.40.50.10800 200 295 2.1E-93 T 11-10-2018 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 Gene3D G3DSA:3.40.50.10800 115 340 2.1E-93 T 11-10-2018 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 Gene3D G3DSA:3.40.50.10800 31 322 2.1E-93 T 11-10-2018 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.184 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 Pfam PF02445 Quinolinate synthetase A protein 31 340 1.4E-101 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 341 1.5E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL538_15050 c3a219c492e593b1748fdea91c6fd0be 353 SUPERFAMILY SSF142754 28 341 1.7E-105 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL538_09345 fc275c6788c56f2af8769541cb1da62c 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.46 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL538_09345 fc275c6788c56f2af8769541cb1da62c 646 Pfam PF13667 ThiC-associated domain 22 104 1.8E-34 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL538_09345 fc275c6788c56f2af8769541cb1da62c 646 Gene3D G3DSA:3.20.20.540 214 527 1.9E-153 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL538_09345 fc275c6788c56f2af8769541cb1da62c 646 Pfam PF01964 Radical SAM ThiC family 144 592 2.1E-198 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL538_09345 fc275c6788c56f2af8769541cb1da62c 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.9E-218 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 SMART SM00927 53 151 4.4E-63 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 SUPERFAMILY SSF52980 2 220 3.86E-80 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 Gene3D G3DSA:3.40.600.10 1 222 4.5E-56 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 147.552 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 5.4E-33 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AL538_11935 1b259a7dcb2e76faf8f1165deccdb2f0 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 6.5E-100 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 Gene3D G3DSA:1.20.1250.20 8 421 5.8E-27 T 11-10-2018 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 Pfam PF01553 Acyltransferase 442 567 6.3E-24 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 SMART SM00563 456 570 4.5E-36 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 Pfam PF07690 Major Facilitator Superfamily 20 383 2.5E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 SUPERFAMILY SSF69593 402 605 2.22E-29 T 11-10-2018 AL538_14355 e07b8203047adbbf11b87956bfc3e3ce 624 SUPERFAMILY SSF103473 8 422 9.16E-29 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_17645 06d0e2e1be70ddebe0e1842244e2724e 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.2E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_17645 06d0e2e1be70ddebe0e1842244e2724e 118 SUPERFAMILY SSF54593 6 116 2.48E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_17645 06d0e2e1be70ddebe0e1842244e2724e 118 Gene3D G3DSA:3.10.180.10 1 118 1.3E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 5.0E-29 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 6.3E-18 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 6.3E-18 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 6.3E-18 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 6.3E-18 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 Gene3D G3DSA:2.30.330.10 31 118 1.2E-23 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 SUPERFAMILY SSF101801 40 115 3.14E-19 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_21360 2804e7cc7f2b43cbe95e9ce0b1d06054 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 112 3.7E-20 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_16075 eccdfff0da2d3f5b79d5b69e213d8f2c 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.0E-9 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL538_16075 eccdfff0da2d3f5b79d5b69e213d8f2c 202 Gene3D G3DSA:1.20.120.1760 7 199 2.8E-19 T 11-10-2018 AL538_16075 eccdfff0da2d3f5b79d5b69e213d8f2c 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Pfam PF00158 Sigma-54 interaction domain 127 292 1.6E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Gene3D G3DSA:1.10.8.60 297 372 4.0E-23 T 11-10-2018 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Gene3D G3DSA:3.40.50.2300 1 118 6.9E-11 T 11-10-2018 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Pfam PF02954 Bacterial regulatory protein, Fis family 395 427 3.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 SMART SM00382 146 289 8.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 SUPERFAMILY SSF46689 336 427 1.12E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Gene3D G3DSA:1.10.10.60 379 437 1.6E-9 T 11-10-2018 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 SUPERFAMILY SSF52172 2 170 1.42E-17 T 11-10-2018 IPR011006 CheY-like superfamily AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 Gene3D G3DSA:3.40.50.300 119 296 5.3E-66 T 11-10-2018 AL538_21375 0b8f5c8ab1c68f41a625bd6c18507c21 444 SUPERFAMILY SSF52540 130 365 2.13E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 11-10-2018 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11160 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 11-10-2018 AL538_14750 afe3cffcef2bb8c45aa92edf49d80657 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 1.2E-33 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AL538_14750 afe3cffcef2bb8c45aa92edf49d80657 106 Gene3D G3DSA:3.30.1390.10 1 106 1.4E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL538_14750 afe3cffcef2bb8c45aa92edf49d80657 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.612 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL538_14750 afe3cffcef2bb8c45aa92edf49d80657 106 SUPERFAMILY SSF54736 21 105 4.03E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL538_08965 f46350a7e2aec79df0657a7c75a99d58 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 9.2E-20 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82714 722 809 4.71E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82866 296 497 2.35E-48 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82866 831 1026 1.57E-41 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82693 38 131 2.3E-24 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82693 135 330 7.85E-24 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.0E-108 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82714 182 272 2.49E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82693 672 856 7.59E-28 T 11-10-2018 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_15445 4d00e64b6a0c3440a186c55a3bf0344d 1053 SUPERFAMILY SSF82693 565 670 8.89E-32 T 11-10-2018 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 Gene3D G3DSA:1.10.10.60 3 50 2.5E-11 T 11-10-2018 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 SUPERFAMILY SSF46689 3 69 1.95E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 147 201 8.7E-14 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AL538_20595 f2893d99efc62aeabb4c68d7f2872f32 204 Gene3D G3DSA:1.10.357.10 51 203 4.0E-29 T 11-10-2018 AL538_12500 a779d4d9ffd6349d7b72041760d7136b 123 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 104 121 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL538_12500 a779d4d9ffd6349d7b72041760d7136b 123 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 123 6.8E-30 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL538_12500 a779d4d9ffd6349d7b72041760d7136b 123 Gene3D G3DSA:2.60.300.12 18 123 1.0E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_12500 a779d4d9ffd6349d7b72041760d7136b 123 SUPERFAMILY SSF89360 19 112 3.34E-24 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_12500 a779d4d9ffd6349d7b72041760d7136b 123 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 9.6E-16 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 PIRSF PIRSF500061 5 513 1.9E-153 T 11-10-2018 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 Pfam PF01645 Conserved region in glutamate synthase 169 480 4.3E-91 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 SUPERFAMILY SSF51395 126 506 3.11E-98 T 11-10-2018 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 PIRSF PIRSF006429 11 513 7.9E-146 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 Gene3D G3DSA:3.40.5.90 1 79 2.9E-33 T 11-10-2018 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 SMART SM00704 47 82 1.1E-6 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 SMART SM00704 9 46 3.5E-11 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 Gene3D G3DSA:3.20.20.70 134 508 1.3E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 13 40 3.5E-11 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL538_25000 d1caeff30aa7aec7c069cb5cd61f828b 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 77 4.1E-8 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Gene3D G3DSA:3.50.50.60 115 461 1.1E-190 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Pfam PF00581 Rhodanese-like domain 482 563 1.2E-9 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 SUPERFAMILY SSF55424 344 467 6.01E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.8E-21 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 5.8E-21 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 5.8E-21 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 5.8E-21 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 5.8E-21 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.7E-16 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Gene3D G3DSA:3.50.50.60 3 361 1.1E-190 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 SMART SM00450 473 567 2.2E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 SUPERFAMILY SSF51905 2 197 7.5E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.8E-23 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.8E-23 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.8E-23 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.8E-23 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.8E-23 T 11-10-2018 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 6.8E-55 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 SUPERFAMILY SSF52821 459 563 6.68E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 Gene3D G3DSA:3.40.250.10 471 565 4.6E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_24460 8d785e2a1d75ec48eeaf360eb6753335 567 SUPERFAMILY SSF51905 155 340 3.94E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 4.2E-19 T 11-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.861 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 3.7E-61 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 Gene3D G3DSA:2.30.30.20 101 153 1.4E-24 T 11-10-2018 AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-46 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily AL538_07295 036ce14d3dd8b4a8a04f27573d649fe1 153 SUPERFAMILY SSF57825 101 151 2.35E-16 T 11-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 Gene3D G3DSA:1.10.10.10 149 214 5.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 SMART SM00421 154 211 4.7E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 7.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 7.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 7.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 SUPERFAMILY SSF46894 139 211 1.29E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 Gene3D G3DSA:3.40.50.2300 11 145 9.2E-30 T 11-10-2018 AL538_16815 c71fe19f27baf815d2f59b6067a4c8b6 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 2.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_02210 b40fcf33a61267a8804c34d7705c13f7 130 SUPERFAMILY SSF52540 21 97 1.06E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_02210 b40fcf33a61267a8804c34d7705c13f7 130 Pfam PF03846 Cell division inhibitor SulA 16 96 1.2E-6 T 11-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AL538_02210 b40fcf33a61267a8804c34d7705c13f7 130 Gene3D G3DSA:3.40.50.300 14 123 1.1E-10 T 11-10-2018 AL538_25935 02d04cac7572cfa20cf307f07d208876 587 SUPERFAMILY SSF55729 314 451 5.83E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_25935 02d04cac7572cfa20cf307f07d208876 587 SMART SM00563 74 197 1.0E-6 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_25935 02d04cac7572cfa20cf307f07d208876 587 Pfam PF13444 Acetyltransferase (GNAT) domain 328 429 1.6E-17 T 11-10-2018 AL538_25935 02d04cac7572cfa20cf307f07d208876 587 SUPERFAMILY SSF69593 44 252 1.31E-14 T 11-10-2018 AL538_25935 02d04cac7572cfa20cf307f07d208876 587 Pfam PF01553 Acyltransferase 62 194 2.2E-7 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 7.0E-144 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PIRSF PIRSF000722 2 397 4.4E-133 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 Gene3D G3DSA:3.30.420.40 3 195 4.1E-65 T 11-10-2018 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 Pfam PF00871 Acetokinase family 6 391 4.5E-141 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 SUPERFAMILY SSF53067 158 396 4.32E-78 T 11-10-2018 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 299 312 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 203 224 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 173 186 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 PRINTS PR00471 Acetate kinase family signature 378 390 1.3E-44 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 Gene3D G3DSA:3.30.420.40 197 397 9.7E-72 T 11-10-2018 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 SUPERFAMILY SSF53067 5 196 3.11E-61 T 11-10-2018 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 167.253 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_25485 b10082f9e364e9f2ea92e0948db5d48a 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Gene3D G3DSA:3.40.50.12330 747 812 4.3E-21 T 11-10-2018 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 605 1.7E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SMART SM00388 378 443 6.4E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 604 5.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 546 5.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 585 5.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 560 5.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SUPERFAMILY SSF52172 754 874 7.68E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SUPERFAMILY SSF55874 432 604 2.36E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Gene3D G3DSA:1.10.287.130 343 441 3.3E-27 T 11-10-2018 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SUPERFAMILY SSF47384 363 444 4.9E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Gene3D G3DSA:3.40.50.2300 813 876 8.5E-18 T 11-10-2018 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SMART SM00448 755 872 2.6E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Gene3D G3DSA:3.30.565.10 442 608 4.1E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 SMART SM00387 490 607 2.5E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Pfam PF00072 Response regulator receiver domain 757 871 1.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22535 44cf289327ca0cddd6d96785f2e674d8 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 379 443 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 Gene3D G3DSA:3.40.190.10 126 325 2.0E-119 T 11-10-2018 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 1.2E-22 T 11-10-2018 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 5.4E-146 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 Gene3D G3DSA:3.40.190.10 26 300 2.0E-119 T 11-10-2018 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 SUPERFAMILY SSF53850 24 325 2.35E-70 T 11-10-2018 AL538_11105 bd1d0e4043852cd15397e36753c2eec0 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 1.3E-147 T 11-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 Gene3D G3DSA:1.10.287.130 193 299 3.5E-7 T 11-10-2018 AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 SUPERFAMILY SSF55874 309 444 2.36E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 4.9E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 Gene3D G3DSA:3.30.565.10 309 448 6.0E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 SUPERFAMILY SSF47384 224 287 9.22E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 446 3.8E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16180 427eebf4661563c1a8fa7afe3ffd96ea 449 SMART SM00387 342 448 2.0E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_06300 e877efbf696e963e333286a8be94a9ab 560 Gene3D G3DSA:3.10.105.10 272 519 1.6E-196 T 11-10-2018 AL538_06300 e877efbf696e963e333286a8be94a9ab 560 SUPERFAMILY SSF53850 42 544 3.26E-107 T 11-10-2018 AL538_06300 e877efbf696e963e333286a8be94a9ab 560 PIRSF PIRSF002741 5 542 1.9E-66 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_06300 e877efbf696e963e333286a8be94a9ab 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 456 2.9E-76 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_06300 e877efbf696e963e333286a8be94a9ab 560 Gene3D G3DSA:3.40.190.10 46 543 1.6E-196 T 11-10-2018 AL538_06300 e877efbf696e963e333286a8be94a9ab 560 Gene3D G3DSA:3.90.76.10 66 172 1.6E-196 T 11-10-2018 AL538_06300 e877efbf696e963e333286a8be94a9ab 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL538_09350 fc0253a2e77b2954392644d7ee2789aa 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.6E-29 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL538_09350 fc0253a2e77b2954392644d7ee2789aa 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 1.1E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL538_09350 fc0253a2e77b2954392644d7ee2789aa 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.805 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AL538_13905 3aedbd5fc26e3f98b37070ddd14375ae 399 Pfam PF07670 Nucleoside recognition 87 182 5.7E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_13905 3aedbd5fc26e3f98b37070ddd14375ae 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 1.0E-133 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL538_13905 3aedbd5fc26e3f98b37070ddd14375ae 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 395 3.7E-70 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL538_13905 3aedbd5fc26e3f98b37070ddd14375ae 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 8.6E-25 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL538_27385 7a5e579b29763fade8240bccd85bbb08 1171 Gene3D G3DSA:2.40.160.10 1005 1165 1.9E-5 T 11-10-2018 IPR023614 Porin domain superfamily AL538_27385 7a5e579b29763fade8240bccd85bbb08 1171 SUPERFAMILY SSF56935 865 1145 2.93E-8 T 11-10-2018 AL538_25140 76d91344ef58b10614f24a4296d22565 296 Gene3D G3DSA:3.40.190.290 91 294 1.5E-54 T 11-10-2018 AL538_25140 76d91344ef58b10614f24a4296d22565 296 SUPERFAMILY SSF46785 6 84 3.01E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_25140 76d91344ef58b10614f24a4296d22565 296 Pfam PF03466 LysR substrate binding domain 88 293 3.5E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_25140 76d91344ef58b10614f24a4296d22565 296 Gene3D G3DSA:1.10.10.10 4 88 8.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25140 76d91344ef58b10614f24a4296d22565 296 SUPERFAMILY SSF53850 89 294 3.62E-39 T 11-10-2018 AL538_25140 76d91344ef58b10614f24a4296d22565 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19955 4393eae5058b454d9a29c6741779103d 306 SUPERFAMILY SSF46785 7 86 3.14E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19955 4393eae5058b454d9a29c6741779103d 306 Gene3D G3DSA:3.40.190.290 90 303 6.4E-13 T 11-10-2018 AL538_19955 4393eae5058b454d9a29c6741779103d 306 Gene3D G3DSA:1.10.10.10 3 84 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19955 4393eae5058b454d9a29c6741779103d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19955 4393eae5058b454d9a29c6741779103d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19955 4393eae5058b454d9a29c6741779103d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19955 4393eae5058b454d9a29c6741779103d 306 Pfam PF03466 LysR substrate binding domain 87 250 4.0E-13 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_19955 4393eae5058b454d9a29c6741779103d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 6.0E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19955 4393eae5058b454d9a29c6741779103d 306 SUPERFAMILY SSF53850 87 299 7.6E-19 T 11-10-2018 AL538_01525 fea7cff5d9c2311e70172a8653351377 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 8.2E-37 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL538_01525 fea7cff5d9c2311e70172a8653351377 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 80 2.0E-19 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL538_01525 fea7cff5d9c2311e70172a8653351377 98 PIRSF PIRSF002736 1 97 1.8E-41 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL538_01525 fea7cff5d9c2311e70172a8653351377 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 3.1E-31 T 11-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AL538_01525 fea7cff5d9c2311e70172a8653351377 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.873 T 11-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 Gene3D G3DSA:1.10.10.10 1 90 5.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 SUPERFAMILY SSF46785 4 112 3.85E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 Pfam PF03466 LysR substrate binding domain 88 294 3.0E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 SUPERFAMILY SSF53850 89 296 9.77E-37 T 11-10-2018 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 Gene3D G3DSA:3.40.190.290 91 293 2.8E-54 T 11-10-2018 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18110 2bca999eeb5deb23946e07039ac071d9 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18620 21c8a2b8bede56c7b2993d5c9fb76ef3 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 135 3.9E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_18620 21c8a2b8bede56c7b2993d5c9fb76ef3 139 Gene3D G3DSA:3.10.180.10 12 139 1.4E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_18620 21c8a2b8bede56c7b2993d5c9fb76ef3 139 SUPERFAMILY SSF54593 10 136 5.23E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_07845 3075850efb0249e2727170d8fdf16dc6 179 Pfam PF10400 Virulence activator alpha C-term 92 176 1.0E-15 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal AL538_07845 3075850efb0249e2727170d8fdf16dc6 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07845 3075850efb0249e2727170d8fdf16dc6 179 SUPERFAMILY SSF46785 3 176 5.45E-45 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_07845 3075850efb0249e2727170d8fdf16dc6 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 SUPERFAMILY SSF53850 88 293 4.5E-31 T 11-10-2018 AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 SUPERFAMILY SSF46785 3 110 7.62E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 Gene3D G3DSA:1.10.10.10 1 88 1.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 Gene3D G3DSA:3.40.190.290 89 294 2.4E-41 T 11-10-2018 AL538_18430 979857dc8121aac5ee0ba0109ee9e144 296 Pfam PF03466 LysR substrate binding domain 86 293 4.7E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PIRSF PIRSF006615 1 492 6.6E-197 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 8 489 2.0E-94 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 5.0E-44 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 Gene3D G3DSA:1.10.1370.30 1 491 2.9E-194 T 11-10-2018 AL538_16810 f26a284a30a869ec4ec6f16ade457973 492 SUPERFAMILY SSF55486 1 490 2.32E-115 T 11-10-2018 AL538_26875 1e1f070e8f04069aa5e89d08cacd7111 435 Gene3D G3DSA:3.40.190.10 28 381 1.8E-136 T 11-10-2018 AL538_26875 1e1f070e8f04069aa5e89d08cacd7111 435 SUPERFAMILY SSF53850 20 424 1.65E-74 T 11-10-2018 AL538_26875 1e1f070e8f04069aa5e89d08cacd7111 435 Pfam PF13416 Bacterial extracellular solute-binding protein 42 365 2.9E-41 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_26875 1e1f070e8f04069aa5e89d08cacd7111 435 Gene3D G3DSA:3.40.190.10 144 421 1.8E-136 T 11-10-2018 AL538_26875 1e1f070e8f04069aa5e89d08cacd7111 435 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 139 156 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AL538_23490 e132131740a507a015488e846647b1e2 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 8.5E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_23490 e132131740a507a015488e846647b1e2 678 Pfam PF00593 TonB dependent receptor 268 677 2.0E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_23490 e132131740a507a015488e846647b1e2 678 SUPERFAMILY SSF56935 29 678 2.83E-125 T 11-10-2018 AL538_23490 e132131740a507a015488e846647b1e2 678 Gene3D G3DSA:2.170.130.10 48 174 1.0E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_23490 e132131740a507a015488e846647b1e2 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 3.8E-91 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_23490 e132131740a507a015488e846647b1e2 678 Gene3D G3DSA:2.40.170.20 176 678 6.5E-96 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 SMART SM00382 356 568 4.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 Gene3D G3DSA:1.20.1560.10 9 314 1.6E-27 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 SUPERFAMILY SSF52540 319 554 1.52E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 26 556 6.9E-184 T 11-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 Pfam PF00005 ABC transporter 347 494 4.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 Gene3D G3DSA:3.40.50.300 315 560 5.7E-66 T 11-10-2018 AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 SUPERFAMILY SSF90123 22 311 7.98E-37 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_17205 8791bef56c77d1fb9f4d056850e62946 576 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 SMART SM00448 2 116 5.0E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 4.6E-37 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Gene3D G3DSA:3.40.50.2300 1 133 1.7E-29 T 11-10-2018 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Gene3D G3DSA:3.30.565.10 408 556 1.5E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Pfam PF00072 Response regulator receiver domain 4 117 3.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 SUPERFAMILY SSF55874 436 551 7.74E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Pfam PF13581 Histidine kinase-like ATPase domain 415 547 8.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 SUPERFAMILY SSF52172 1 157 3.42E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 SMART SM00331 164 393 5.8E-17 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_25155 3fd73db9a513653be5b6ca1a5ccec63a 560 Gene3D G3DSA:3.60.40.10 134 393 2.0E-50 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_04005 1fce4a1546d2216433b97130970209c6 319 Gene3D G3DSA:3.20.20.70 1 242 7.6E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_04005 1fce4a1546d2216433b97130970209c6 319 Gene3D G3DSA:1.20.225.30 243 314 1.5E-26 T 11-10-2018 AL538_04005 1fce4a1546d2216433b97130970209c6 319 SUPERFAMILY SSF51395 1 313 3.11E-73 T 11-10-2018 AL538_04005 1fce4a1546d2216433b97130970209c6 319 PIRSF PIRSF006621 1 318 9.8E-74 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_04005 1fce4a1546d2216433b97130970209c6 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.623 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AL538_04005 1fce4a1546d2216433b97130970209c6 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_04005 1fce4a1546d2216433b97130970209c6 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 296 8.7E-77 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 SUPERFAMILY SSF64518 146 636 1.44E-23 T 11-10-2018 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 2.2E-59 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 407 424 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 125 145 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.2E-11 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13480 b9df87d5a10cda4978e45de1e99edf77 637 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 590 636 8.7E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Pfam PF00005 ABC transporter 622 859 6.6E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:1.20.1580.10 90 491 8.9E-246 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:1.20.1580.10 691 829 1.2E-140 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.979 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:1.10.8.280 286 402 8.9E-246 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:3.40.50.300 6 593 8.9E-246 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:3.30.190.20 130 243 8.9E-246 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 SUPERFAMILY SSF52540 620 912 5.97E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 Gene3D G3DSA:3.40.50.300 616 935 1.2E-140 T 11-10-2018 AL538_07575 3cc7a905ff42531619c03e45eeed0a31 940 SUPERFAMILY SSF52540 4 568 2.27E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18210 94ddff60687ffebcd649e765d5c3a8f3 240 PIRSF PIRSF005426 1 240 5.9E-85 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 AL538_18210 94ddff60687ffebcd649e765d5c3a8f3 240 SUPERFAMILY SSF55469 1 238 1.22E-72 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_18210 94ddff60687ffebcd649e765d5c3a8f3 240 Gene3D G3DSA:3.40.109.10 1 240 2.2E-76 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_18210 94ddff60687ffebcd649e765d5c3a8f3 240 Pfam PF00881 Nitroreductase family 8 159 6.2E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_18065 edad2a155e9c780e6b4b472ef5776e43 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 1.8E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_18065 edad2a155e9c780e6b4b472ef5776e43 295 SUPERFAMILY SSF111369 42 242 1.7E-22 T 11-10-2018 AL538_18065 edad2a155e9c780e6b4b472ef5776e43 295 Gene3D G3DSA:2.40.50.100 42 102 2.8E-13 T 11-10-2018 AL538_18065 edad2a155e9c780e6b4b472ef5776e43 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 6.9E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_18065 edad2a155e9c780e6b4b472ef5776e43 295 Gene3D G3DSA:2.40.30.170 170 294 1.3E-26 T 11-10-2018 AL538_11915 3203e844cbc621642335161d758cf69a 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_11915 3203e844cbc621642335161d758cf69a 444 SMART SM00382 166 306 2.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_11915 3203e844cbc621642335161d758cf69a 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_11915 3203e844cbc621642335161d758cf69a 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_11915 3203e844cbc621642335161d758cf69a 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_11915 3203e844cbc621642335161d758cf69a 444 Pfam PF00158 Sigma-54 interaction domain 146 305 3.3E-37 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_11915 3203e844cbc621642335161d758cf69a 444 SUPERFAMILY SSF46689 352 438 6.45E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_11915 3203e844cbc621642335161d758cf69a 444 Gene3D G3DSA:1.10.8.60 310 386 7.2E-23 T 11-10-2018 AL538_11915 3203e844cbc621642335161d758cf69a 444 SUPERFAMILY SSF52172 27 190 1.54E-7 T 11-10-2018 IPR011006 CheY-like superfamily AL538_11915 3203e844cbc621642335161d758cf69a 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 11-10-2018 AL538_11915 3203e844cbc621642335161d758cf69a 444 SUPERFAMILY SSF52540 146 380 9.03E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11915 3203e844cbc621642335161d758cf69a 444 Gene3D G3DSA:3.40.50.300 145 309 1.0E-39 T 11-10-2018 AL538_11915 3203e844cbc621642335161d758cf69a 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 PIRSF PIRSF000124 1 388 1.5E-136 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 SUPERFAMILY SSF52413 283 387 2.22E-28 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 5.9E-9 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 11-10-2018 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 SUPERFAMILY SSF51735 1 194 6.9E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 5.6E-33 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 SUPERFAMILY SSF48179 191 287 7.31E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Gene3D G3DSA:3.40.50.720 1 193 3.8E-59 T 11-10-2018 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 PIRSF PIRSF500134 1 343 2.0E-121 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 PIRSF PIRSF500134 338 388 0.0078 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 7.8E-106 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 SMART SM00984 300 387 4.4E-14 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.5E-27 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AL538_10735 95f0cef280b040bf16e8ed49725c1ee6 388 Gene3D G3DSA:3.40.50.720 222 388 9.0E-69 T 11-10-2018 AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 SMART SM00382 31 229 1.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 SUPERFAMILY SSF52540 7 251 2.1E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 PIRSF PIRSF039085 3 256 5.8E-117 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_14675 939caf2c02a7e8b4e7d54973c1d49cd4 256 Gene3D G3DSA:3.40.50.300 4 255 5.4E-74 T 11-10-2018 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 Gene3D G3DSA:3.40.50.300 315 562 5.3E-76 T 11-10-2018 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 Pfam PF00664 ABC transporter transmembrane region 82 274 2.6E-16 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 SUPERFAMILY SSF90123 18 311 3.14E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 ProSitePatterns PS00211 ABC transporters family signature. 461 475 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 Gene3D G3DSA:1.20.1560.10 2 314 9.2E-30 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 SUPERFAMILY SSF52540 318 559 1.61E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 Pfam PF00005 ABC transporter 340 488 2.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_18590 d17c06e9fdc669c191cb7cbbddb527e6 562 SMART SM00382 349 535 1.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 4.8E-49 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 Gene3D G3DSA:1.10.287.470 104 174 1.7E-10 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 SUPERFAMILY SSF56954 171 258 1.31E-5 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 Gene3D G3DSA:2.40.30.170 58 68 1.7E-10 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 Pfam PF13437 HlyD family secretion protein 316 423 9.6E-18 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 9.4E-135 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL538_19540 b078fe570d6181cad874035b78596277 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AL538_19540 b078fe570d6181cad874035b78596277 463 Gene3D G3DSA:2.40.50.100 69 103 1.7E-10 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 SUPERFAMILY SSF111369 64 139 5.62E-6 T 11-10-2018 AL538_19540 b078fe570d6181cad874035b78596277 463 Pfam PF13533 Biotin-lipoyl like 75 108 3.4E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 9.8E-20 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.8E-20 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 9.8E-20 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 9.8E-20 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 9.8E-20 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 SUPERFAMILY SSF51905 1 373 6.74E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 6.5E-17 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Gene3D G3DSA:1.10.287.990 37 107 5.5E-95 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Gene3D G3DSA:3.50.50.60 147 275 5.5E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PIRSF PIRSF000350 1 473 6.0E-61 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 333 1.3E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Gene3D G3DSA:3.30.390.30 353 476 6.7E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.2E-39 T 11-10-2018 AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 Gene3D G3DSA:3.50.50.60 7 336 5.5E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_07805 703026cfb765ba0c012d9a2acdfed138 490 SUPERFAMILY SSF55424 355 473 2.92E-24 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 SUPERFAMILY SSF53850 40 270 1.74E-34 T 11-10-2018 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 Pfam PF01464 Transglycosylase SLT domain 303 417 1.6E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 Gene3D G3DSA:3.40.190.10 40 270 5.3E-50 T 11-10-2018 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 Gene3D G3DSA:1.10.530.10 298 463 8.3E-41 T 11-10-2018 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 SUPERFAMILY SSF53955 299 459 8.0E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 SMART SM00062 45 282 1.6E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 Gene3D G3DSA:3.40.190.10 134 238 5.3E-50 T 11-10-2018 AL538_12105 af88b8bd392a3b55212ed635006d8c3f 492 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 267 6.7E-28 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_24120 c66db474167f3c300b587e522fed1cfb 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 4.9E-11 T 11-10-2018 IPR013987 PhnA protein, N-terminal AL538_24120 c66db474167f3c300b587e522fed1cfb 185 SMART SM00782 6 52 1.5E-29 T 11-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial AL538_24120 c66db474167f3c300b587e522fed1cfb 185 Pfam PF03831 PhnA domain 119 184 2.6E-22 T 11-10-2018 IPR013988 PhnA protein, C-terminal AL538_24120 c66db474167f3c300b587e522fed1cfb 185 SUPERFAMILY SSF82057 117 184 3.85E-20 T 11-10-2018 AL538_24120 c66db474167f3c300b587e522fed1cfb 185 Gene3D G3DSA:2.30.30.40 115 185 9.3E-24 T 11-10-2018 AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 Gene3D G3DSA:3.90.180.10 16 351 1.3E-34 T 11-10-2018 AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 SUPERFAMILY SSF51735 169 338 1.33E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 Pfam PF00107 Zinc-binding dehydrogenase 190 328 2.1E-10 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 Gene3D G3DSA:3.40.50.720 159 320 1.3E-34 T 11-10-2018 AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 1.3E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_26355 89f5d81a59f07d28747571afdc22b9a0 423 SUPERFAMILY SSF50129 4 189 3.2E-20 T 11-10-2018 IPR011032 GroES-like superfamily AL538_16305 987d90a21f04b3bc4d11f61aeef09e94 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 7.0E-76 T 11-10-2018 IPR005642 Lysine exporter LysO AL538_16305 987d90a21f04b3bc4d11f61aeef09e94 301 Pfam PF03956 Lysine exporter LysO 112 297 6.1E-52 T 11-10-2018 IPR005642 Lysine exporter LysO AL538_26825 b9acf5d040bf5470153ceab27dc524da 197 SUPERFAMILY SSF46689 4 78 5.49E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_26825 b9acf5d040bf5470153ceab27dc524da 197 Gene3D G3DSA:1.10.357.10 2 197 5.5E-41 T 11-10-2018 AL538_26825 b9acf5d040bf5470153ceab27dc524da 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_26825 b9acf5d040bf5470153ceab27dc524da 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_26825 b9acf5d040bf5470153ceab27dc524da 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 1.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_14055 5857bcac719f132f23ebef62841ebf1e 780 SUPERFAMILY SSF82866 205 409 7.19E-20 T 11-10-2018 AL538_14055 5857bcac719f132f23ebef62841ebf1e 780 SUPERFAMILY SSF82866 597 771 2.62E-20 T 11-10-2018 AL538_14055 5857bcac719f132f23ebef62841ebf1e 780 Pfam PF03176 MMPL family 107 433 8.6E-12 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.2E-43 T 11-10-2018 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 SUPERFAMILY SSF52540 32 222 9.86E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04780 606e62e11fa479e976b4aff5082d9437 724 SUPERFAMILY SSF48019 243 360 1.45E-30 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 508 581 5.6E-21 T 11-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 SMART SM00382 37 179 8.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Gene3D G3DSA:1.20.272.10 242 361 5.2E-38 T 11-10-2018 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 6.6E-133 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Gene3D G3DSA:3.40.50.300 13 177 8.5E-102 T 11-10-2018 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Gene3D G3DSA:3.30.300.150 581 706 5.2E-40 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 1.2E-30 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 583 721 1.3E-49 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_04780 606e62e11fa479e976b4aff5082d9437 724 Gene3D G3DSA:1.10.8.60 8 240 8.5E-102 T 11-10-2018 AL538_26540 9e57ca4f1b532493c25d6a13d51dd9f6 171 Gene3D G3DSA:3.40.1570.10 1 171 2.8E-60 T 11-10-2018 AL538_26540 9e57ca4f1b532493c25d6a13d51dd9f6 171 PIRSF PIRSF030840 1 171 5.3E-63 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL538_26540 9e57ca4f1b532493c25d6a13d51dd9f6 171 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 12 165 1.0E-62 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL538_26540 9e57ca4f1b532493c25d6a13d51dd9f6 171 Pfam PF06228 Haem utilisation ChuX/HutX 28 165 1.9E-32 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like AL538_26540 9e57ca4f1b532493c25d6a13d51dd9f6 171 SUPERFAMILY SSF144064 2 167 1.02E-55 T 11-10-2018 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 Gene3D G3DSA:3.40.470.10 2 225 1.4E-104 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 SUPERFAMILY SSF52141 5 222 5.23E-96 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 SMART SM00986 49 210 1.5E-39 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 SMART SM00987 49 210 1.5E-39 T 11-10-2018 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 9.1E-87 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 2.5E-26 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_11840 b9c07b19bc150b6ab0473c0a89371ee4 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.04 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AL538_22815 5357f8fb9c0cacb142c64a5a969e794a 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 2.3E-53 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL538_22815 5357f8fb9c0cacb142c64a5a969e794a 248 Gene3D G3DSA:2.50.20.10 13 244 2.0E-58 T 11-10-2018 AL538_25090 537ca29ecbebc90686b219685121015d 441 Gene3D G3DSA:3.30.70.270 278 440 3.7E-49 T 11-10-2018 AL538_25090 537ca29ecbebc90686b219685121015d 441 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 280 438 2.0E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_25090 537ca29ecbebc90686b219685121015d 441 SUPERFAMILY SSF55073 289 439 1.88E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_25090 537ca29ecbebc90686b219685121015d 441 SMART SM01079 66 207 5.5E-4 T 11-10-2018 IPR006189 CHASE domain AL538_25090 537ca29ecbebc90686b219685121015d 441 Pfam PF03924 CHASE domain 99 201 1.3E-7 T 11-10-2018 IPR006189 CHASE domain AL538_25090 537ca29ecbebc90686b219685121015d 441 SMART SM00267 273 440 1.6E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_25090 537ca29ecbebc90686b219685121015d 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 436 2.0E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 Gene3D G3DSA:3.20.20.80 116 550 1.5E-143 T 11-10-2018 AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 Gene3D G3DSA:2.60.40.10 4 115 2.6E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 SUPERFAMILY SSF51445 112 542 1.81E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 SUPERFAMILY SSF51011 556 647 2.52E-14 T 11-10-2018 AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 Gene3D G3DSA:2.60.40.1180 555 648 3.5E-7 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 SMART SM00642 112 539 6.2E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 6.0E-11 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 644 2.2E-202 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 SUPERFAMILY SSF81296 7 124 2.35E-22 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_20155 4b02ed7a1313b8ba5888cd29e297e727 655 Pfam PF00128 Alpha amylase, catalytic domain 199 251 4.1E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 Gene3D G3DSA:3.40.50.620 3 204 1.7E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 Gene3D G3DSA:1.10.579.10 293 471 7.9E-80 T 11-10-2018 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 Pfam PF00875 DNA photolyase 3 169 9.2E-44 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 Gene3D G3DSA:1.25.40.80 133 286 1.7E-72 T 11-10-2018 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 SUPERFAMILY SSF52425 1 188 1.31E-48 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 PRINTS PR00147 DNA photolyase signature 142 158 1.2E-29 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 3.5E-80 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AL538_17340 ab57bbbee87420a17b8d676d982cf587 471 SUPERFAMILY SSF48173 196 470 4.32E-104 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 SMART SM01130 1 290 1.2E-142 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 4.2E-118 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 PIRSF PIRSF001365 1 292 2.3E-97 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.541 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 7.6E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 7.6E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 7.6E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 7.6E-36 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.3E-109 T 11-10-2018 IPR002220 DapA-like GO:0016829 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 Gene3D G3DSA:3.20.20.70 1 292 4.4E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_05245 e5076532f5e1ce3ba562f2e91d4e02ce 292 SUPERFAMILY SSF51569 2 290 1.26E-101 T 11-10-2018 AL538_05615 8e40a96a5d1587e085b33a73906355b0 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 158 1.9E-8 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL538_05615 8e40a96a5d1587e085b33a73906355b0 159 Gene3D G3DSA:3.10.50.30 79 159 6.1E-8 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL538_05615 8e40a96a5d1587e085b33a73906355b0 159 SUPERFAMILY SSF54534 83 158 8.5E-11 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:1.10.8.500 376 426 5.8E-16 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SUPERFAMILY SSF52172 718 843 1.15E-40 T 11-10-2018 IPR011006 CheY-like superfamily AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SMART SM00448 722 835 4.6E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:3.30.450.20 266 358 9.4E-9 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SUPERFAMILY SSF55785 860 927 9.77E-9 T 11-10-2018 IPR035965 PAS domain superfamily AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SMART SM00304 377 430 1.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:3.30.565.10 526 688 1.2E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:3.40.50.2300 723 862 7.3E-40 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Pfam PF13188 PAS domain 879 918 1.4E-4 T 11-10-2018 IPR000014 PAS domain AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SUPERFAMILY SSF55874 516 686 2.36E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:3.30.450.20 863 953 3.8E-8 T 11-10-2018 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SMART SM00388 459 527 6.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SMART SM00387 573 684 3.6E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Pfam PF00672 HAMP domain 379 427 1.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SUPERFAMILY SSF47384 446 527 1.96E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 SMART SM00091 873 938 9.2E-6 T 11-10-2018 IPR000014 PAS domain AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.6E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_06295 45b42c2e7860eac79a277cda8ffbe6a4 1128 Gene3D G3DSA:1.10.287.130 427 525 4.3E-22 T 11-10-2018 AL538_21110 0ecede33037495683611dafe3abd2795 204 Pfam PF00924 Mechanosensitive ion channel 60 190 5.7E-14 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_21110 0ecede33037495683611dafe3abd2795 204 Gene3D G3DSA:2.30.30.60 118 169 1.5E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_21110 0ecede33037495683611dafe3abd2795 204 SUPERFAMILY SSF50182 103 169 4.58E-13 T 11-10-2018 IPR010920 LSM domain superfamily AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 Gene3D G3DSA:2.40.100.10 1 164 2.9E-66 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 SUPERFAMILY SSF50891 1 162 8.91E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 8.8E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 8.8E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 8.8E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 PIRSF PIRSF001467 1 163 1.0E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL538_15855 4a41dd8387d219020324d0c45fe87b87 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 3.0E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_21330 3e954f42c1c18fb57258070229a5079a 265 SUPERFAMILY SSF141868 30 257 7.59E-9 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21330 3e954f42c1c18fb57258070229a5079a 265 Gene3D G3DSA:3.20.20.450 27 262 3.6E-8 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21330 3e954f42c1c18fb57258070229a5079a 265 Pfam PF00563 EAL domain 31 250 7.0E-7 T 11-10-2018 IPR001633 EAL domain AL538_22500 a75219d98fcd88729f4b74d198fdbe58 422 Gene3D G3DSA:1.20.1740.10 1 420 9.2E-61 T 11-10-2018 AL538_22500 a75219d98fcd88729f4b74d198fdbe58 422 Pfam PF13520 Amino acid permease 11 366 9.7E-31 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_22500 a75219d98fcd88729f4b74d198fdbe58 422 PIRSF PIRSF006060 1 417 4.6E-60 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_16450 cc12bb873ddecba61e98511b3c724ad8 119 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 33 115 1.2E-12 T 11-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein AL538_16450 cc12bb873ddecba61e98511b3c724ad8 119 Gene3D G3DSA:1.20.120.1620 25 119 3.8E-27 T 11-10-2018 IPR038314 T6SS superfamily AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 SUPERFAMILY SSF48029 133 344 5.1E-67 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Gene3D G3DSA:1.10.220.30 214 351 1.8E-43 T 11-10-2018 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Gene3D G3DSA:1.10.220.30 20 103 1.0E-16 T 11-10-2018 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.8E-58 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 11-10-2018 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 PIRSF PIRSF003161 18 351 5.2E-114 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 9.6E-98 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 SUPERFAMILY SSF48029 20 134 2.22E-19 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Pfam PF01706 FliG C-terminal domain 236 343 4.8E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Pfam PF14842 FliG N-terminal domain 24 124 2.3E-27 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL538_05110 7a6cf13dd02c30e6666b3644f7a3420a 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 Gene3D G3DSA:1.10.8.60 143 212 8.1E-20 T 11-10-2018 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 Gene3D G3DSA:1.20.272.10 213 337 1.4E-38 T 11-10-2018 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 Gene3D G3DSA:3.40.50.300 1 139 3.4E-49 T 11-10-2018 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 1.3E-33 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 331 1.1E-103 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 SUPERFAMILY SSF48019 211 331 2.38E-30 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.0E-46 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AL538_13085 a3e424cc3814ac7ae8ff80e99289b581 339 SUPERFAMILY SSF52540 1 208 2.92E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23325 6fa41d1065712312150f119d2000c94d 692 Gene3D G3DSA:3.55.50.10 96 187 1.4E-94 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 SUPERFAMILY SSF69279 201 365 1.17E-34 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 Pfam PF05954 Phage late control gene D protein (GPD) 26 331 1.1E-80 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 SUPERFAMILY SSF69349 444 683 1.96E-48 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 SUPERFAMILY SSF69279 7 183 7.37E-57 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 Gene3D G3DSA:3.30.1920.30 229 288 1.4E-94 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 Gene3D G3DSA:2.30.110.50 17 332 1.4E-94 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 SUPERFAMILY SSF69255 367 454 4.97E-32 T 11-10-2018 AL538_23325 6fa41d1065712312150f119d2000c94d 692 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 7 522 2.3E-201 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL538_23325 6fa41d1065712312150f119d2000c94d 692 Gene3D G3DSA:2.40.50.230 359 458 1.8E-42 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL538_23325 6fa41d1065712312150f119d2000c94d 692 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 505 4.2E-129 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Pfam PF13426 PAS domain 139 239 1.6E-8 T 11-10-2018 IPR000014 PAS domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 SUPERFAMILY SSF55785 126 239 2.44E-15 T 11-10-2018 IPR035965 PAS domain superfamily AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Pfam PF00563 EAL domain 425 657 4.0E-64 T 11-10-2018 IPR001633 EAL domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 SMART SM00052 417 663 3.6E-61 T 11-10-2018 IPR001633 EAL domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Pfam PF00571 CBS domain 761 816 8.8E-4 T 11-10-2018 IPR000644 CBS domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 SMART SM00091 128 194 2.0E-6 T 11-10-2018 IPR000014 PAS domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Gene3D G3DSA:3.10.580.10 689 816 1.7E-9 T 11-10-2018 AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Gene3D G3DSA:3.20.20.450 405 665 6.3E-73 T 11-10-2018 IPR035919 EAL domain superfamily AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 SUPERFAMILY SSF54631 692 815 9.68E-10 T 11-10-2018 AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 SUPERFAMILY SSF141868 424 661 9.55E-67 T 11-10-2018 IPR035919 EAL domain superfamily AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.6E-10 T 11-10-2018 IPR000014 PAS domain AL538_03460 7f3a173736c351aa87f74c8adcf9b432 818 Gene3D G3DSA:3.30.450.20 121 239 2.7E-15 T 11-10-2018 AL538_16090 b4d678a68c3b6eec7438d21b8a7a1f97 385 Gene3D G3DSA:3.40.190.10 73 336 6.7E-16 T 11-10-2018 AL538_16090 b4d678a68c3b6eec7438d21b8a7a1f97 385 PIRSF PIRSF029172 1 385 2.1E-174 T 11-10-2018 IPR027020 Protein ynjB AL538_16090 b4d678a68c3b6eec7438d21b8a7a1f97 385 Gene3D G3DSA:3.40.190.10 157 301 6.7E-16 T 11-10-2018 AL538_16090 b4d678a68c3b6eec7438d21b8a7a1f97 385 SUPERFAMILY SSF53850 37 383 1.65E-40 T 11-10-2018 AL538_16090 b4d678a68c3b6eec7438d21b8a7a1f97 385 Pfam PF13416 Bacterial extracellular solute-binding protein 60 353 6.2E-23 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_01880 feea23d0731c183b0b7d3da43a5dd94e 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 3.6E-7 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AL538_23915 f9cb4d9a36315ef88e1a565a1ec22dda 275 SUPERFAMILY SSF46894 4 98 1.7E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_23915 f9cb4d9a36315ef88e1a565a1ec22dda 275 Gene3D G3DSA:1.10.10.10 2 117 9.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23915 f9cb4d9a36315ef88e1a565a1ec22dda 275 SMART SM00862 23 98 8.1E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_23915 f9cb4d9a36315ef88e1a565a1ec22dda 275 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 98 5.6E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_09760 cc000f3523597dd18649399b1f29d859 326 Pfam PF00107 Zinc-binding dehydrogenase 159 275 4.6E-11 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_09760 cc000f3523597dd18649399b1f29d859 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.6E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_09760 cc000f3523597dd18649399b1f29d859 326 Gene3D G3DSA:3.40.50.720 126 294 2.1E-123 T 11-10-2018 AL538_09760 cc000f3523597dd18649399b1f29d859 326 SUPERFAMILY SSF50129 2 145 4.11E-44 T 11-10-2018 IPR011032 GroES-like superfamily AL538_09760 cc000f3523597dd18649399b1f29d859 326 SUPERFAMILY SSF51735 116 289 4.14E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09760 cc000f3523597dd18649399b1f29d859 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.1E-139 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI AL538_09760 cc000f3523597dd18649399b1f29d859 326 SMART SM00829 13 324 4.9E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_09760 cc000f3523597dd18649399b1f29d859 326 Gene3D G3DSA:3.90.180.10 17 325 2.1E-123 T 11-10-2018 AL538_19200 ebb37c4841fc14c85ec5f91944164f28 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 4.1E-40 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19200 ebb37c4841fc14c85ec5f91944164f28 106 Pfam PF00699 Urease beta subunit 4 99 1.5E-41 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19200 ebb37c4841fc14c85ec5f91944164f28 106 Gene3D G3DSA:2.10.150.10 1 106 2.5E-44 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19200 ebb37c4841fc14c85ec5f91944164f28 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.213 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19200 ebb37c4841fc14c85ec5f91944164f28 106 SUPERFAMILY SSF51278 1 105 8.76E-44 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF51735 1 122 1.46E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_13775 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL538_13775 69fedecf31a8700497ff57836dc02f36 290 PIRSF PIRSF001553 1 289 3.4E-134 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 Pfam PF00549 CoA-ligase 151 271 3.4E-22 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.0E-40 T 11-10-2018 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.0E-40 T 11-10-2018 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.0E-40 T 11-10-2018 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.0E-40 T 11-10-2018 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.720 1 123 4.3E-51 T 11-10-2018 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 Pfam PF02629 CoA binding domain 6 99 6.0E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AL538_13775 69fedecf31a8700497ff57836dc02f36 290 SUPERFAMILY SSF52210 123 285 1.19E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 Gene3D G3DSA:3.40.50.261 124 288 6.4E-76 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 SMART SM00881 4 100 1.1E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 6.5E-146 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_13775 69fedecf31a8700497ff57836dc02f36 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.428 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:3.40.50.880 984 1303 1.4E-139 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF56042 825 1036 3.44E-55 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:3.30.1330.10 615 808 4.8E-26 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:3.90.650.10 809 983 5.4E-31 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF109736 156 221 2.22E-20 T 11-10-2018 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF56042 433 616 9.27E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF82697 1 151 8.89E-51 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 969 6.1E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 4.5E-27 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF55326 619 817 3.66E-70 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1047 1300 2.1E-106 T 11-10-2018 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF52317 1044 1301 7.23E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1303 21.318 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:3.30.1330.10 215 420 2.9E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SMART SM01211 1047 1302 5.0E-158 T 11-10-2018 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 SUPERFAMILY SSF55326 222 429 2.2E-64 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:3.90.650.10 421 607 1.0E-58 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12780 422c632062b35e981417743ad1e9ba63 1303 Gene3D G3DSA:1.10.8.750 153 214 4.8E-26 T 11-10-2018 AL538_12780 422c632062b35e981417743ad1e9ba63 1303 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1301 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 SUPERFAMILY SSF51735 143 319 4.59E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.5E-272 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 SUPERFAMILY SSF52283 2 174 1.53E-51 T 11-10-2018 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 2.2E-46 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.0E-36 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 Gene3D G3DSA:3.40.50.720 3 371 1.0E-156 T 11-10-2018 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 SMART SM01002 152 317 1.8E-81 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 Gene3D G3DSA:3.40.50.720 143 324 1.0E-156 T 11-10-2018 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 8.1E-74 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 PIRSF PIRSF000203 1 516 6.7E-270 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL538_24340 fc6c4525f5ab0f686a801a4050ea1bfe 518 SMART SM01003 4 143 5.3E-68 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 Gene3D G3DSA:3.10.580.10 196 320 1.5E-44 T 11-10-2018 AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 SMART SM00116 275 322 0.77 T 11-10-2018 IPR000644 CBS domain AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 SMART SM00116 210 258 0.3 T 11-10-2018 IPR000644 CBS domain AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 Gene3D G3DSA:3.40.50.10490 5 195 5.7E-65 T 11-10-2018 AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.9E-113 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 Pfam PF00571 CBS domain 268 320 6.5E-8 T 11-10-2018 IPR000644 CBS domain AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 Pfam PF00571 CBS domain 210 258 9.0E-5 T 11-10-2018 IPR000644 CBS domain AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 PIRSF PIRSF004692 1 323 6.3E-132 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 SUPERFAMILY SSF53697 11 318 1.33E-69 T 11-10-2018 AL538_07350 00dd8064159621033b9d8f61faf9d48b 323 Pfam PF01380 SIS domain 41 172 3.5E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_20535 cb17ef429315ca5fa35ff179b4c62ff2 241 SMART SM00382 30 211 4.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_20535 cb17ef429315ca5fa35ff179b4c62ff2 241 Gene3D G3DSA:3.40.50.300 2 240 1.0E-53 T 11-10-2018 AL538_20535 cb17ef429315ca5fa35ff179b4c62ff2 241 Pfam PF00005 ABC transporter 21 163 9.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_20535 cb17ef429315ca5fa35ff179b4c62ff2 241 SUPERFAMILY SSF52540 5 224 5.04E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20535 cb17ef429315ca5fa35ff179b4c62ff2 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_18985 c508122e93801b67a23384a775898fad 236 SUPERFAMILY SSF52540 5 222 3.64E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18985 c508122e93801b67a23384a775898fad 236 SMART SM00382 34 221 1.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_18985 c508122e93801b67a23384a775898fad 236 Gene3D G3DSA:3.40.50.300 3 234 1.2E-59 T 11-10-2018 AL538_18985 c508122e93801b67a23384a775898fad 236 Pfam PF00005 ABC transporter 25 170 6.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_18985 c508122e93801b67a23384a775898fad 236 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_22865 aa362e763025ce7496188da9c4d64749 743 SUPERFAMILY SSF52172 616 737 3.13E-30 T 11-10-2018 IPR011006 CheY-like superfamily AL538_22865 aa362e763025ce7496188da9c4d64749 743 Gene3D G3DSA:3.40.50.2300 603 741 5.0E-34 T 11-10-2018 AL538_22865 aa362e763025ce7496188da9c4d64749 743 Pfam PF00072 Response regulator receiver domain 620 734 7.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22865 aa362e763025ce7496188da9c4d64749 743 SMART SM00448 617 733 2.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17955 311c78de986584b497a5d143d04d1180 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 8.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_17955 311c78de986584b497a5d143d04d1180 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 8.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_17955 311c78de986584b497a5d143d04d1180 337 SMART SM00342 250 332 2.0E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_17955 311c78de986584b497a5d143d04d1180 337 Pfam PF12833 Helix-turn-helix domain 259 333 4.6E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_17955 311c78de986584b497a5d143d04d1180 337 SUPERFAMILY SSF46689 288 334 1.61E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_17955 311c78de986584b497a5d143d04d1180 337 Gene3D G3DSA:1.10.10.60 233 336 2.7E-18 T 11-10-2018 AL538_01775 9a5bb1f8d8eb0217f1bf61aa4006f6c5 426 SUPERFAMILY SSF161098 40 416 6.05E-47 T 11-10-2018 IPR035906 MetI-like superfamily AL538_01775 9a5bb1f8d8eb0217f1bf61aa4006f6c5 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 413 7.0E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_01775 9a5bb1f8d8eb0217f1bf61aa4006f6c5 426 Gene3D G3DSA:1.10.3720.10 166 425 1.7E-48 T 11-10-2018 IPR035906 MetI-like superfamily AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Gene3D G3DSA:3.40.350.10 152 298 4.3E-38 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 3.6E-39 T 11-10-2018 AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Gene3D G3DSA:3.90.230.10 305 596 1.1E-92 T 11-10-2018 AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 135 2.5E-20 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 SUPERFAMILY SSF53092 14 139 3.31E-12 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 9.2E-21 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 SUPERFAMILY SSF55920 308 562 5.5E-52 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Gene3D G3DSA:3.40.350.10 1 151 2.8E-44 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_01705 61fdc09efc593552d644c93c3443c4ff 598 Pfam PF00557 Metallopeptidase family M24 315 526 1.4E-43 T 11-10-2018 IPR000994 Peptidase M24 AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 Gene3D G3DSA:3.40.50.720 3 235 1.3E-46 T 11-10-2018 AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 Pfam PF00106 short chain dehydrogenase 3 191 9.0E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20755 681d2133f0c7e506229df99b0b39da0c 235 SUPERFAMILY SSF51735 3 235 5.34E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 Gene3D G3DSA:3.40.190.10 96 297 3.6E-44 T 11-10-2018 AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 5.2E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 SUPERFAMILY SSF53850 94 300 5.97E-35 T 11-10-2018 AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 SUPERFAMILY SSF46785 7 85 2.52E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 Gene3D G3DSA:3.40.190.10 175 273 3.6E-44 T 11-10-2018 AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 Pfam PF03466 LysR substrate binding domain 100 298 1.1E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_05930 2f834ab974f83bf21a549fad0fb32e11 308 Gene3D G3DSA:1.10.10.10 4 91 9.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 2.8E-48 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.6E-13 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Gene3D G3DSA:2.60.40.290 25 167 1.4E-55 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 SUPERFAMILY SSF81296 781 882 8.82E-37 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_13335 f09e9b16118d470978a36de50a7ab039 883 SUPERFAMILY SSF49384 26 198 1.57E-65 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 1.6E-27 T 11-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.2E-109 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 SUPERFAMILY SSF51445 332 772 1.6E-144 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_13335 f09e9b16118d470978a36de50a7ab039 883 SMART SM01081 34 195 9.4E-93 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 SUPERFAMILY SSF55545 208 331 3.01E-24 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Gene3D G3DSA:3.20.20.80 330 817 5.3E-166 T 11-10-2018 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Gene3D G3DSA:3.30.379.10 204 329 2.8E-24 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Gene3D G3DSA:2.60.40.10 818 882 1.4E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_13335 f09e9b16118d470978a36de50a7ab039 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 5.1E-62 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_13915 c9859040c3ab4871fbce1715dc4e19f1 441 Gene3D G3DSA:3.30.870.10 231 433 2.3E-8 T 11-10-2018 AL538_13915 c9859040c3ab4871fbce1715dc4e19f1 441 SUPERFAMILY SSF56024 264 430 5.89E-6 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 1.3E-22 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 1.3E-22 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 1.3E-22 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 1.3E-22 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 1.3E-22 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 SUPERFAMILY SSF46548 15 129 9.42E-22 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 402 1.4E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 SUPERFAMILY SSF51971 117 360 3.18E-62 T 11-10-2018 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 106 4.5E-18 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 Gene3D G3DSA:3.50.50.60 225 359 9.1E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 Gene3D G3DSA:1.10.1060.10 8 115 8.4E-26 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 Gene3D G3DSA:3.50.50.60 116 224 1.2E-17 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_16105 d99fdb6a85f2d6d75cb836c821d8c97e 598 SUPERFAMILY SSF46548 409 552 3.79E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.4E-15 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 SUPERFAMILY SSF88697 250 310 7.45E-12 T 11-10-2018 IPR015947 PUA-like superfamily AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 3.0E-24 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Gene3D G3DSA:3.30.2350.10 1 248 2.3E-95 T 11-10-2018 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.1E-56 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 SUPERFAMILY SSF55120 9 247 1.27E-83 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 19.078 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 Gene3D G3DSA:2.30.130.10 249 311 2.6E-21 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL538_06165 26d1256eff09920e8c7e22b784dc7949 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 9.7E-87 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_18745 ed172c66cc744826dbb2080ac19051c0 170 Pfam PF13527 Acetyltransferase (GNAT) domain 19 130 3.1E-19 T 11-10-2018 AL538_18745 ed172c66cc744826dbb2080ac19051c0 170 Gene3D G3DSA:3.40.630.30 2 162 4.4E-26 T 11-10-2018 AL538_18745 ed172c66cc744826dbb2080ac19051c0 170 SUPERFAMILY SSF55729 18 137 8.37E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_01735 0f502f741beea34244fbca84bdeb4206 165 SMART SM00862 29 107 1.1E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_01735 0f502f741beea34244fbca84bdeb4206 165 SUPERFAMILY SSF46894 19 107 6.8E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_01735 0f502f741beea34244fbca84bdeb4206 165 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 107 3.6E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_01735 0f502f741beea34244fbca84bdeb4206 165 Gene3D G3DSA:1.10.10.10 19 107 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04525 859ced4f8c1aee8440a3271e4918a044 340 SUPERFAMILY SSF56349 65 329 1.7E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_04525 859ced4f8c1aee8440a3271e4918a044 340 Gene3D G3DSA:1.10.443.10 169 339 1.3E-34 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_04525 859ced4f8c1aee8440a3271e4918a044 340 Pfam PF00589 Phage integrase family 174 321 4.8E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_13570 13eb2ea989435a0451407dbc508df035 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 6.2E-102 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 AL538_13570 13eb2ea989435a0451407dbc508df035 305 Gene3D G3DSA:3.40.50.720 2 305 1.6E-77 T 11-10-2018 AL538_13570 13eb2ea989435a0451407dbc508df035 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 2.3E-25 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL538_13570 13eb2ea989435a0451407dbc508df035 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.5E-14 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 AL538_13570 13eb2ea989435a0451407dbc508df035 305 SUPERFAMILY SSF51735 1 300 7.95E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07055 37c0343aec466d372ff5e6b962f97741 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.234 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL538_07055 37c0343aec466d372ff5e6b962f97741 90 SUPERFAMILY SSF111148 1 89 1.57E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AL538_07055 37c0343aec466d372ff5e6b962f97741 90 PIRSF PIRSF029827 1 90 1.6E-43 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL538_07055 37c0343aec466d372ff5e6b962f97741 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 6.0E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL538_07055 37c0343aec466d372ff5e6b962f97741 90 Gene3D G3DSA:1.10.3880.10 1 90 3.9E-39 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 AL538_07055 37c0343aec466d372ff5e6b962f97741 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.4E-42 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AL538_20490 786f8ef8f442c55933101c7829731a61 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.7E-17 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL538_20490 786f8ef8f442c55933101c7829731a61 206 SUPERFAMILY SSF74653 118 196 3.92E-23 T 11-10-2018 AL538_20490 786f8ef8f442c55933101c7829731a61 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 5.8E-17 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_20490 786f8ef8f442c55933101c7829731a61 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 5.8E-17 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_20490 786f8ef8f442c55933101c7829731a61 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 5.8E-17 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_20490 786f8ef8f442c55933101c7829731a61 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 5.8E-17 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_20490 786f8ef8f442c55933101c7829731a61 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 204 6.5E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL538_20490 786f8ef8f442c55933101c7829731a61 206 Gene3D G3DSA:3.30.1150.10 103 206 6.4E-26 T 11-10-2018 AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 231 9.5E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 Pfam PF00593 TonB dependent receptor 755 1027 9.0E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 Pfam PF07660 Secretin and TonB N terminus short domain 51 95 8.4E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 SMART SM00965 45 96 4.8E-10 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 Gene3D G3DSA:3.55.50.30 23 95 6.1E-23 T 11-10-2018 AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 Gene3D G3DSA:2.170.130.10 122 250 7.8E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_19470 fd1bd9d4dddf9ce11b6184ca3b111566 1030 SUPERFAMILY SSF56935 123 1030 1.53E-63 T 11-10-2018 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 1.2E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 1.2E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 1.2E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 1.2E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 1.2E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 Pfam PF02107 Flagellar L-ring protein 80 257 5.5E-56 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_13465 ce006cf1e8e6f34825fc0837046d05a7 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.566 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 SUPERFAMILY SSF64518 5 376 7.06E-98 T 11-10-2018 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Gene3D G3DSA:1.20.1330.10 44 327 2.8E-78 T 11-10-2018 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Gene3D G3DSA:1.10.8.410 328 376 8.0E-19 T 11-10-2018 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 6.2E-45 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.2E-24 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Gene3D G3DSA:3.30.70.2120 174 275 2.8E-78 T 11-10-2018 AL538_05175 3c8dd2d4cca44e926a357bbf0dffdbbb 377 Pfam PF07196 Flagellin hook IN motif 204 246 8.1E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 285 39.376 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 Pfam PF00226 DnaJ domain 220 280 6.7E-12 T 11-10-2018 IPR001623 DnaJ domain AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 SUPERFAMILY SSF158682 5 232 1.94E-31 T 11-10-2018 IPR029024 TerB-like AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 Gene3D G3DSA:1.10.3680.10 45 191 1.2E-26 T 11-10-2018 IPR029024 TerB-like AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 PRINTS PR00625 DnaJ domain signature 240 255 6.1E-9 T 11-10-2018 IPR001623 DnaJ domain AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 PRINTS PR00625 DnaJ domain signature 264 284 6.1E-9 T 11-10-2018 IPR001623 DnaJ domain AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 PRINTS PR00625 DnaJ domain signature 222 240 6.1E-9 T 11-10-2018 IPR001623 DnaJ domain AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 SMART SM00271 219 284 9.4E-18 T 11-10-2018 IPR001623 DnaJ domain AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 Pfam PF05099 Tellurite resistance protein TerB 44 177 1.7E-17 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 SUPERFAMILY SSF46565 217 280 8.52E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_11215 c6e84d4fa9050055a861cf95f622c5b3 286 Gene3D G3DSA:1.10.287.110 195 284 4.4E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_05310 e3493fa779b601a21cec593b78818894 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.613 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL538_05310 e3493fa779b601a21cec593b78818894 212 Gene3D G3DSA:3.40.50.170 2 212 2.8E-85 T 11-10-2018 AL538_05310 e3493fa779b601a21cec593b78818894 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_05310 e3493fa779b601a21cec593b78818894 212 SUPERFAMILY SSF53328 2 201 3.4E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_05310 e3493fa779b601a21cec593b78818894 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 2.0E-80 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AL538_05310 e3493fa779b601a21cec593b78818894 212 Pfam PF00551 Formyl transferase 2 182 1.6E-65 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 SUPERFAMILY SSF88659 102 173 1.31E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 1.2E-74 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 Pfam PF04545 Sigma-70, region 4 189 236 5.9E-9 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 Gene3D G3DSA:1.20.140.160 99 242 7.6E-32 T 11-10-2018 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 SUPERFAMILY SSF88659 163 240 1.23E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 Pfam PF04542 Sigma-70 region 2 28 101 1.5E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 Gene3D G3DSA:1.10.1740.10 13 98 2.6E-17 T 11-10-2018 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 SUPERFAMILY SSF88946 22 100 1.39E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_21290 0d0f1a74631dcb7fd752ba2733b3d62a 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 6.3E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 SUPERFAMILY SSF55681 71 269 1.35E-60 T 11-10-2018 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 SUPERFAMILY SSF46785 8 61 5.65E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 318 2.5E-66 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 1.2E-19 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Gene3D G3DSA:2.30.30.100 272 314 1.2E-20 T 11-10-2018 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 1.4E-9 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Gene3D G3DSA:3.30.930.10 67 271 2.6E-65 T 11-10-2018 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Gene3D G3DSA:1.10.10.10 2 65 4.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 SUPERFAMILY SSF50037 272 318 1.74E-10 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.936 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AL538_08720 5d356976c2e500de4c99dbcac029ce5a 321 Pfam PF08279 HTH domain 9 60 1.4E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 AL538_07580 17bdec505865a54668893ceb002f6666 594 Pfam PF15864 Protein glycosylation ligase 174 199 9.2E-11 T 11-10-2018 IPR031726 Protein glycosylation ligase domain AL538_07580 17bdec505865a54668893ceb002f6666 594 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 4.3E-65 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal AL538_07580 17bdec505865a54668893ceb002f6666 594 Pfam PF04932 O-Antigen ligase 221 368 1.4E-15 T 11-10-2018 IPR007016 O-antigen ligase-related AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Gene3D G3DSA:3.40.50.300 590 712 2.9E-25 T 11-10-2018 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Gene3D G3DSA:3.40.50.300 469 589 6.6E-28 T 11-10-2018 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 SUPERFAMILY SSF52540 384 723 5.05E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 38 721 50.387 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Gene3D G3DSA:1.10.10.1020 24 144 5.6E-22 T 11-10-2018 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Pfam PF13604 AAA domain 258 419 4.4E-31 T 11-10-2018 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 29 723 1.1E-216 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 SUPERFAMILY SSF52540 31 464 3.81E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Pfam PF13538 UvrD-like helicase C-terminal domain 652 697 6.7E-14 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain AL538_05770 6a6806ba3658023d897c3abc9efb2b5a 725 Gene3D G3DSA:3.40.50.300 226 459 3.9E-75 T 11-10-2018 AL538_19275 455e3c0df3f0bfd6ae790bceb6237858 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.862 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_19275 455e3c0df3f0bfd6ae790bceb6237858 411 Pfam PF03616 Sodium/glutamate symporter 6 379 9.8E-151 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_19275 455e3c0df3f0bfd6ae790bceb6237858 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 3.0E-134 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 Gene3D G3DSA:2.40.50.40 156 228 7.1E-9 T 11-10-2018 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 SMART SM00850 164 263 2.6E-19 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 Pfam PF00072 Response regulator receiver domain 8 116 4.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 Gene3D G3DSA:3.40.50.2300 2 139 1.2E-32 T 11-10-2018 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 Pfam PF04397 LytTr DNA-binding domain 165 262 4.4E-25 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 SUPERFAMILY SSF52172 4 156 2.42E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL538_19305 531aa4fc6a2b18ee1c02f42403884407 263 SMART SM00448 5 117 1.7E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82714 721 802 5.36E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1028 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82714 183 272 1.7E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82693 39 132 2.79E-22 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82866 296 497 1.2E-48 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82866 827 1021 3.79E-42 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.70.1430 38 813 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:1.20.1640.10 513 1018 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.70.1430 567 664 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.70.1440 665 861 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82693 668 852 2.96E-17 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82693 135 328 8.89E-21 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Gene3D G3DSA:3.30.2090.10 717 805 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.6E-84 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 SUPERFAMILY SSF82693 565 667 4.24E-22 T 11-10-2018 AL538_01740 6911d62baacc30769d93e631bcbfecaa 1029 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 Pfam PF02357 Transcription termination factor nusG 2 94 1.1E-19 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 164 8.6E-62 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.093 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 SUPERFAMILY SSF82679 1 101 1.83E-28 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 SUPERFAMILY SSF50104 114 164 3.76E-6 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 SMART SM00738 1 101 1.2E-25 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_13645 643ac654e0a3e9d161f8b6f3d0a9d853 166 Gene3D G3DSA:3.30.70.940 1 165 2.5E-52 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AL538_06340 83306567eb966e0e33af356461b0120e 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.5E-209 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain AL538_06340 83306567eb966e0e33af356461b0120e 802 Gene3D G3DSA:2.70.98.40 1 302 2.1E-116 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily AL538_06340 83306567eb966e0e33af356461b0120e 802 SUPERFAMILY SSF74650 1 269 2.17E-82 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_06340 83306567eb966e0e33af356461b0120e 802 Pfam PF06165 Glycosyltransferase family 36 21 267 3.0E-84 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 AL538_06340 83306567eb966e0e33af356461b0120e 802 Gene3D G3DSA:1.50.10.10 311 720 8.0E-135 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL538_06340 83306567eb966e0e33af356461b0120e 802 SMART SM01068 1 63 2.3E-20 T 11-10-2018 IPR009342 Putative carbohydrate binding domain AL538_06340 83306567eb966e0e33af356461b0120e 802 Gene3D G3DSA:2.60.420.10 721 801 1.3E-29 T 11-10-2018 AL538_06340 83306567eb966e0e33af356461b0120e 802 SUPERFAMILY SSF48208 274 801 5.44E-109 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Gene3D G3DSA:1.10.3210.10 665 793 2.8E-18 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 SUPERFAMILY SSF53850 294 509 1.92E-29 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 SMART SM00062 292 509 1.3E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Gene3D G3DSA:3.40.190.10 283 505 3.0E-39 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 SUPERFAMILY SSF109604 669 752 5.71E-8 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Gene3D G3DSA:1.10.3210.10 881 1025 1.7E-22 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Pfam PF13487 HD domain 902 967 7.4E-19 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 298 507 1.8E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Gene3D G3DSA:1.10.287.130 601 664 1.3E-5 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 SMART SM00471 674 985 0.0012 T 11-10-2018 IPR003607 HD/PDEase domain AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 Gene3D G3DSA:3.40.190.10 374 468 3.0E-39 T 11-10-2018 AL538_16910 51be644d9d34fbf1e18b9db7f3e93a96 1048 SUPERFAMILY SSF109604 903 1000 8.17E-7 T 11-10-2018 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 846 2.9E-26 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 SUPERFAMILY SSF50677 203 408 1.67E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 3.7E-294 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 3.0E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Gene3D G3DSA:3.90.740.10 195 413 5.1E-241 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.497 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 1.6E-218 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Gene3D G3DSA:1.10.730.20 645 934 1.0E-87 T 11-10-2018 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 Gene3D G3DSA:3.40.50.620 25 634 5.1E-241 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 SUPERFAMILY SSF47323 657 933 6.73E-75 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_11995 b6fb4c07836ee99e74027fe58842927d 942 SUPERFAMILY SSF52374 4 652 4.38E-139 T 11-10-2018 AL538_17855 567b6723a22ea5a2f539cefc0649c0a9 143 Pfam PF09905 DNA-binding protein VF530 11 73 2.2E-32 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL538_17855 567b6723a22ea5a2f539cefc0649c0a9 143 Gene3D G3DSA:1.10.720.30 19 78 8.4E-28 T 11-10-2018 IPR036361 SAP domain superfamily AL538_18365 dce045dded6849ce9e2aecc64a9bf924 114 Pfam PF00367 phosphotransferase system, EIIB 26 57 5.7E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_18365 dce045dded6849ce9e2aecc64a9bf924 114 SUPERFAMILY SSF55604 23 94 7.85E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_18365 dce045dded6849ce9e2aecc64a9bf924 114 Gene3D G3DSA:3.30.1360.60 18 98 2.3E-23 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_18365 dce045dded6849ce9e2aecc64a9bf924 114 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 35 52 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_18365 dce045dded6849ce9e2aecc64a9bf924 114 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 20 82 5.6E-15 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 Pfam PF00672 HAMP domain 215 261 1.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 SMART SM00304 213 265 1.4E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 SUPERFAMILY SSF58104 233 542 1.83E-73 T 11-10-2018 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 508 1.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 SMART SM00283 280 541 5.2E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 Gene3D G3DSA:1.10.287.950 213 542 3.6E-74 T 11-10-2018 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.3E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.3E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_17450 3c8cb424c2499a94e4c800b5aa810f18 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 101 116 1.3E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_07855 a99ef7175b387d7571ba1534da635517 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:3.30.70.260 367 380 6.4E-6 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 SUPERFAMILY SSF55347 600 783 1.11E-43 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:1.20.120.1320 44 137 2.9E-72 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Pfam PF00696 Amino acid kinase family 5 273 5.7E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_07855 a99ef7175b387d7571ba1534da635517 802 SUPERFAMILY SSF51735 448 622 4.33E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07855 a99ef7175b387d7571ba1534da635517 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 4.2E-66 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Pfam PF00742 Homoserine dehydrogenase 600 795 9.9E-43 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL538_07855 a99ef7175b387d7571ba1534da635517 802 SUPERFAMILY SSF53633 5 291 3.01E-56 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:3.40.1160.10 8 290 2.9E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:3.30.360.10 611 781 4.0E-103 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:3.40.50.720 451 798 4.0E-103 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Gene3D G3DSA:3.30.70.260 381 443 6.4E-6 T 11-10-2018 AL538_07855 a99ef7175b387d7571ba1534da635517 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07855 a99ef7175b387d7571ba1534da635517 802 PIRSF PIRSF000727 5 802 1.3E-288 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_07855 a99ef7175b387d7571ba1534da635517 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 8.5E-15 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.1E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 4.8E-61 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 Gene3D G3DSA:3.10.20.30 1 112 1.3E-36 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_12375 c483b794fe55d19ecd4c6bd66f93fb12 112 SUPERFAMILY SSF54292 5 107 2.49E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_03265 43eb50c090ac9e2e1ca1d7cb05047012 170 PIRSF PIRSF028103 1 169 4.6E-42 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL538_03265 43eb50c090ac9e2e1ca1d7cb05047012 170 Gene3D G3DSA:3.30.70.260 85 170 4.7E-13 T 11-10-2018 AL538_03265 43eb50c090ac9e2e1ca1d7cb05047012 170 SUPERFAMILY SSF55021 89 167 3.04E-10 T 11-10-2018 AL538_03265 43eb50c090ac9e2e1ca1d7cb05047012 170 Pfam PF13740 ACT domain 5 67 5.1E-10 T 11-10-2018 AL538_22860 28cf474f56508c3c3b40ba9661f48d7a 474 SUPERFAMILY SSF56954 3 432 3.66E-71 T 11-10-2018 AL538_22860 28cf474f56508c3c3b40ba9661f48d7a 474 Pfam PF02321 Outer membrane efflux protein 28 213 3.2E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_22860 28cf474f56508c3c3b40ba9661f48d7a 474 Pfam PF02321 Outer membrane efflux protein 244 430 3.6E-34 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_22860 28cf474f56508c3c3b40ba9661f48d7a 474 Gene3D G3DSA:1.20.1600.10 26 450 1.4E-74 T 11-10-2018 AL538_06720 a1db65d3a34e8912444eabe053772291 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 5.4E-73 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL538_06720 a1db65d3a34e8912444eabe053772291 258 Pfam PF01975 Survival protein SurE 13 191 4.3E-61 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL538_06720 a1db65d3a34e8912444eabe053772291 258 Gene3D G3DSA:3.40.1210.10 2 258 1.8E-96 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL538_06720 a1db65d3a34e8912444eabe053772291 258 SUPERFAMILY SSF64167 11 256 9.42E-86 T 11-10-2018 AL538_06720 a1db65d3a34e8912444eabe053772291 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.723 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 PIRSF PIRSF000171 1 580 6.1E-49 T 11-10-2018 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Gene3D G3DSA:3.90.700.10 246 350 1.0E-169 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 SUPERFAMILY SSF51905 5 443 4.45E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Gene3D G3DSA:4.10.80.40 548 588 5.5E-24 T 11-10-2018 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.8E-274 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 SUPERFAMILY SSF46977 452 588 1.57E-45 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Gene3D G3DSA:1.20.58.100 431 547 8.6E-38 T 11-10-2018 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Gene3D G3DSA:3.50.50.60 9 416 1.0E-169 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 7.7E-240 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.2E-35 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13750 df7ddec7dd74470bffc5b57c74a5bfb8 588 Pfam PF00890 FAD binding domain 9 405 2.7E-118 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_00700 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_00700 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00700 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00945 cff43f11f352b234771842c3b120df17 306 SUPERFAMILY SSF51735 1 113 2.36E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_00945 cff43f11f352b234771842c3b120df17 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_00945 cff43f11f352b234771842c3b120df17 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 198 1.5E-62 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_00945 cff43f11f352b234771842c3b120df17 306 Gene3D G3DSA:3.30.160.110 114 149 1.6E-14 T 11-10-2018 AL538_00945 cff43f11f352b234771842c3b120df17 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 204 1.2E-12 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_00945 cff43f11f352b234771842c3b120df17 306 Gene3D G3DSA:1.10.8.210 150 211 1.9E-9 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_00945 cff43f11f352b234771842c3b120df17 306 Pfam PF13241 Putative NAD(P)-binding 6 116 8.9E-32 T 11-10-2018 AL538_00945 cff43f11f352b234771842c3b120df17 306 Gene3D G3DSA:3.40.50.720 1 113 1.8E-35 T 11-10-2018 AL538_00945 cff43f11f352b234771842c3b120df17 306 SUPERFAMILY SSF75615 115 199 2.88E-25 T 11-10-2018 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Gene3D G3DSA:1.20.5.110 40 119 1.5E-21 T 11-10-2018 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Gene3D G3DSA:1.25.40.10 133 251 6.7E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 SMART SM00028 171 204 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 SMART SM00028 207 240 1.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 4.7E-38 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal AL538_14970 68c9776c087503782c33f9514b72a0ef 251 SUPERFAMILY SSF48452 142 244 7.27E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.442 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Pfam PF13174 Tetratricopeptide repeat 208 240 8.0E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Pfam PF13432 Tetratricopeptide repeat 145 197 3.3E-7 T 11-10-2018 AL538_14970 68c9776c087503782c33f9514b72a0ef 251 Pfam PF16331 TolA binding protein trimerisation 43 114 4.1E-24 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AL538_23730 d3d7aaf6ec97235ac91b7be2c73f111f 183 Pfam PF01569 PAP2 superfamily 83 163 1.5E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_23730 d3d7aaf6ec97235ac91b7be2c73f111f 183 SUPERFAMILY SSF48317 29 170 4.58E-29 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL538_23730 d3d7aaf6ec97235ac91b7be2c73f111f 183 SMART SM00014 59 157 4.1E-6 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_23730 d3d7aaf6ec97235ac91b7be2c73f111f 183 Gene3D G3DSA:1.20.144.10 86 169 1.2E-17 T 11-10-2018 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SUPERFAMILY SSF54106 345 388 2.62E-11 T 11-10-2018 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Pfam PF01476 LysM domain 346 388 9.3E-13 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Pfam PF01476 LysM domain 420 463 3.7E-12 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Pfam PF01476 LysM domain 477 519 5.5E-11 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SUPERFAMILY SSF53955 114 273 7.03E-41 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Pfam PF01464 Transglycosylase SLT domain 127 228 1.6E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SMART SM00257 476 520 1.5E-9 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SMART SM00257 345 388 9.8E-15 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SMART SM00257 419 463 2.2E-14 T 11-10-2018 IPR018392 LysM domain AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Gene3D G3DSA:3.10.350.10 405 470 9.1E-16 T 11-10-2018 IPR036779 LysM domain superfamily AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Gene3D G3DSA:3.10.350.10 330 399 7.1E-16 T 11-10-2018 IPR036779 LysM domain superfamily AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SUPERFAMILY SSF54106 474 521 7.85E-10 T 11-10-2018 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Gene3D G3DSA:1.10.530.10 111 262 2.3E-29 T 11-10-2018 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 SUPERFAMILY SSF54106 418 463 2.22E-11 T 11-10-2018 AL538_05365 f465d2ad8f5dde0ab19597021dee97ee 528 Gene3D G3DSA:3.10.350.10 474 522 6.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 SUPERFAMILY SSF51445 28 393 1.03E-95 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 SMART SM00642 27 417 2.5E-58 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 Gene3D G3DSA:2.40.30.140 127 229 2.1E-156 T 11-10-2018 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 Gene3D G3DSA:3.20.20.80 28 392 2.1E-156 T 11-10-2018 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 SUPERFAMILY SSF51011 420 504 9.35E-31 T 11-10-2018 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 Pfam PF00128 Alpha amylase, catalytic domain 56 356 2.7E-22 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 PIRSF PIRSF001021 3 507 2.0E-227 T 11-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AL538_24695 0986bde0111eedd08bb70b211b0b99b6 507 Gene3D G3DSA:2.60.40.1180 423 506 4.2E-26 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_26205 6d50639400c41d1ffba1c7611d364180 546 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 545 6.3E-213 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 Gene3D G3DSA:1.20.210.10 28 546 2.1E-218 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 SUPERFAMILY SSF81442 39 545 1.7E-193 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 1.3E-150 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26205 6d50639400c41d1ffba1c7611d364180 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 2.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 Gene3D G3DSA:3.40.190.10 105 307 3.0E-69 T 11-10-2018 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 SUPERFAMILY SSF53850 104 310 5.61E-41 T 11-10-2018 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 Gene3D G3DSA:1.10.10.10 15 102 1.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 SUPERFAMILY SSF46785 19 99 2.72E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 59 70 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 59 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 Pfam PF03466 LysR substrate binding domain 111 311 3.7E-24 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 2.7E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09755 284d452fb0226fbf8a45c68042ab28ba 325 Gene3D G3DSA:3.40.190.10 184 283 3.0E-69 T 11-10-2018 AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.468 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 SUPERFAMILY SSF158651 1 74 5.36E-29 T 11-10-2018 IPR023202 YejL-like superfamily AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 Gene3D G3DSA:1.10.3390.10 1 75 6.0E-32 T 11-10-2018 IPR023202 YejL-like superfamily AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 9.0E-31 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 PIRSF PIRSF006188 1 72 2.4E-36 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL538_04590 50b34ef2fcf19b73be9f84b46b5ea77c 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 5.5E-20 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 8.4E-23 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 SUPERFAMILY SSF52343 104 235 3.01E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 SUPERFAMILY SSF63380 2 101 5.18E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 Gene3D G3DSA:2.40.30.10 1 102 1.2E-21 T 11-10-2018 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 Gene3D G3DSA:3.40.50.80 103 237 1.5E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_09195 f2e8885f3f1c2b88d6826af4213f2b80 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_00605 b876664130fb509271ca7942593037df 483 Gene3D G3DSA:3.40.50.2300 16 143 2.1E-30 T 11-10-2018 AL538_00605 b876664130fb509271ca7942593037df 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_00605 b876664130fb509271ca7942593037df 483 SUPERFAMILY SSF52172 16 199 6.69E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_00605 b876664130fb509271ca7942593037df 483 Gene3D G3DSA:1.10.8.60 325 389 1.4E-17 T 11-10-2018 AL538_00605 b876664130fb509271ca7942593037df 483 SUPERFAMILY SSF46689 427 475 2.15E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_00605 b876664130fb509271ca7942593037df 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_00605 b876664130fb509271ca7942593037df 483 SMART SM00382 175 321 3.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00605 b876664130fb509271ca7942593037df 483 Gene3D G3DSA:1.10.10.60 426 473 2.5E-13 T 11-10-2018 AL538_00605 b876664130fb509271ca7942593037df 483 Gene3D G3DSA:3.40.50.300 144 324 2.2E-65 T 11-10-2018 AL538_00605 b876664130fb509271ca7942593037df 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 5.6E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_00605 b876664130fb509271ca7942593037df 483 Pfam PF00072 Response regulator receiver domain 18 127 3.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00605 b876664130fb509271ca7942593037df 483 SMART SM00448 16 127 2.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00605 b876664130fb509271ca7942593037df 483 SUPERFAMILY SSF52540 154 384 3.91E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00605 b876664130fb509271ca7942593037df 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_00605 b876664130fb509271ca7942593037df 483 Pfam PF00158 Sigma-54 interaction domain 155 321 1.9E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_18025 91ef7d351f344cb6ed641e445fd3b01c 296 Pfam PF12697 Alpha/beta hydrolase family 56 284 1.7E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_18025 91ef7d351f344cb6ed641e445fd3b01c 296 Gene3D G3DSA:1.10.10.800 141 226 2.2E-77 T 11-10-2018 AL538_18025 91ef7d351f344cb6ed641e445fd3b01c 296 Gene3D G3DSA:3.40.50.1820 13 281 2.2E-77 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18025 91ef7d351f344cb6ed641e445fd3b01c 296 SUPERFAMILY SSF53474 4 295 9.08E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_03770 ad482a44c5db4ef54ee1c0f3474b75bf 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.815 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL538_03770 ad482a44c5db4ef54ee1c0f3474b75bf 226 SUPERFAMILY SSF52540 6 223 1.89E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03770 ad482a44c5db4ef54ee1c0f3474b75bf 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 4.0E-84 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL538_03770 ad482a44c5db4ef54ee1c0f3474b75bf 226 Pfam PF02224 Cytidylate kinase 8 221 5.5E-77 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AL538_03770 ad482a44c5db4ef54ee1c0f3474b75bf 226 Gene3D G3DSA:3.40.50.300 1 226 1.6E-81 T 11-10-2018 AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 Pfam PF03641 Possible lysine decarboxylase 187 326 1.2E-35 T 11-10-2018 IPR031100 LOG family AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.5E-50 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 7.0E-57 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 Gene3D G3DSA:3.30.1850.10 1 120 9.5E-57 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 SUPERFAMILY SSF102405 119 327 3.36E-42 T 11-10-2018 AL538_12945 dcc61d1c747ab98d55e84da6ff324217 458 Gene3D G3DSA:3.40.50.450 121 450 1.0E-124 T 11-10-2018 AL538_17150 eab60330b8de699c55ad438d2c217c51 390 Pfam PF00534 Glycosyl transferases group 1 193 334 1.0E-12 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_17150 eab60330b8de699c55ad438d2c217c51 390 SUPERFAMILY SSF53756 9 358 1.36E-28 T 11-10-2018 AL538_17150 eab60330b8de699c55ad438d2c217c51 390 Gene3D G3DSA:3.40.50.2000 175 353 5.5E-22 T 11-10-2018 AL538_17150 eab60330b8de699c55ad438d2c217c51 390 Gene3D G3DSA:3.40.50.2000 108 358 5.5E-22 T 11-10-2018 AL538_21160 830ff386692a6aa4fceb90817a9229cb 177 PIRSF PIRSF017018 1 177 1.3E-69 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type AL538_21160 830ff386692a6aa4fceb90817a9229cb 177 Pfam PF10634 Fe2+ transport protein 27 175 9.5E-67 T 11-10-2018 IPR018470 Periplasmic metal-binding protein Tp34-type AL538_21160 830ff386692a6aa4fceb90817a9229cb 177 Gene3D G3DSA:2.60.40.2480 25 177 1.6E-72 T 11-10-2018 IPR038482 Periplasmic metal-binding protein tp34-type superfamily AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.429 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 6.9E-87 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 1.8E-49 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 PIRSF PIRSF000857 6 253 1.7E-57 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 Gene3D G3DSA:3.40.50.620 8 221 1.1E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 9.6E-91 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AL538_07650 4b5f0db82605dd931517e3117cb08b50 259 SUPERFAMILY SSF52402 26 213 2.05E-55 T 11-10-2018 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SUPERFAMILY SSF82282 8 400 4.71E-119 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SUPERFAMILY SSF47644 654 740 4.32E-29 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Pfam PF02607 B12 binding domain 660 734 9.7E-26 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:3.20.20.330 2 340 2.7E-130 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:3.10.196.10 909 1224 4.3E-145 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.0E-123 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SUPERFAMILY SSF56507 903 1225 8.11E-132 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SUPERFAMILY SSF51717 357 631 1.22E-87 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SUPERFAMILY SSF52242 745 895 1.26E-44 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:1.10.288.10 938 1094 4.3E-145 T 11-10-2018 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Pfam PF02310 B12 binding domain 749 842 1.4E-17 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:1.10.1240.10 650 738 1.7E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.7E-59 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 SMART SM01018 658 741 7.5E-45 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 PIRSF PIRSF000381 3 1197 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:3.20.20.20 341 643 2.6E-130 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 325 8.2E-82 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL538_07595 ce25cb44db1d6525ba9bbebfa9690dd4 1226 Gene3D G3DSA:3.40.50.280 745 896 2.8E-55 T 11-10-2018 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Gene3D G3DSA:3.40.50.80 116 255 7.8E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 SUPERFAMILY SSF52343 119 249 4.06E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 3.3E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 3.3E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 3.3E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Pfam PF00175 Oxidoreductase NAD-binding domain 126 229 1.1E-11 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Gene3D G3DSA:2.40.30.10 5 109 9.4E-25 T 11-10-2018 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 SUPERFAMILY SSF63380 4 110 6.81E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 271 337 1.3E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Pfam PF00970 Oxidoreductase FAD-binding domain 19 108 3.4E-13 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 Gene3D G3DSA:3.10.20.30 261 347 2.4E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 SUPERFAMILY SSF54292 238 346 2.1E-24 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_16060 5a2a3cf9fb19f7cd1c7ff341743408c6 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 PIRSF PIRSF001363 11 544 2.6E-251 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 Gene3D G3DSA:1.20.1220.12 423 544 1.3E-47 T 11-10-2018 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 SUPERFAMILY SSF51645 22 543 1.7E-186 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 Pfam PF01274 Malate synthase 25 543 3.9E-202 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 Gene3D G3DSA:3.20.20.360 12 422 7.4E-191 T 11-10-2018 AL538_12275 d3b3998daeefa08350d32a0764209a7a 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 8.6E-264 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SMART SM00267 461 634 9.5E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Gene3D G3DSA:3.30.70.270 471 637 1.4E-45 T 11-10-2018 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Pfam PF13176 Tetratricopeptide repeat 197 222 1.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SUPERFAMILY SSF48452 228 407 5.12E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SUPERFAMILY SSF55073 477 635 3.14E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Gene3D G3DSA:1.25.40.10 226 470 6.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SMART SM00028 239 272 50.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SMART SM00028 155 188 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SMART SM00028 195 228 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SMART SM00028 319 352 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 1.5E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Gene3D G3DSA:1.25.40.10 114 224 4.5E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 SUPERFAMILY SSF48452 149 269 1.56E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25245 9ce1216c0066162a11822941e5a363bd 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 470 633 4.8E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_25245 9ce1216c0066162a11822941e5a363bd 637 Pfam PF13181 Tetratricopeptide repeat 241 269 0.024 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_22735 cd5f202415a56114fe014873be85b40c 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 2.1E-28 T 11-10-2018 AL538_22735 cd5f202415a56114fe014873be85b40c 200 SUPERFAMILY SSF56784 8 192 1.63E-44 T 11-10-2018 IPR036412 HAD-like superfamily AL538_22735 cd5f202415a56114fe014873be85b40c 200 Gene3D G3DSA:3.40.50.1000 11 191 9.5E-43 T 11-10-2018 IPR023214 HAD superfamily AL538_22735 cd5f202415a56114fe014873be85b40c 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 189 2.3E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_22735 cd5f202415a56114fe014873be85b40c 200 Gene3D G3DSA:1.10.150.240 22 92 9.5E-43 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_22735 cd5f202415a56114fe014873be85b40c 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 4.9E-57 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 Gene3D G3DSA:3.30.70.990 9 94 1.2E-27 T 11-10-2018 IPR035570 UPF0234, N-terminal AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 SUPERFAMILY SSF89963 2 86 7.85E-31 T 11-10-2018 IPR036183 YajQ-like superfamily AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 5.4E-65 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 Gene3D G3DSA:3.30.70.860 95 160 6.5E-30 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 SUPERFAMILY SSF89963 88 160 1.96E-28 T 11-10-2018 IPR036183 YajQ-like superfamily AL538_00940 ee09ec4f45c6f511984f58190eaf50c0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.543 T 11-10-2018 IPR007551 Protein of unknown function DUF520 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 Pfam PF00072 Response regulator receiver domain 4 115 2.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 SMART SM00421 143 200 1.4E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 SMART SM00448 2 115 6.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 2.6E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 SUPERFAMILY SSF46894 129 202 2.18E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 Gene3D G3DSA:3.40.50.12740 2 203 4.1E-65 T 11-10-2018 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.6E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22690 af086eb007f61710cf6f8c4ef5d0c8ef 208 SUPERFAMILY SSF52172 3 132 1.57E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL538_20160 075bc5e7fd040fd380023f9a9f4e127e 441 Hamap MF_01301 Maltoporin [lamB]. 1 441 46.976 T 11-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 AL538_20160 075bc5e7fd040fd380023f9a9f4e127e 441 Pfam PF02264 LamB porin 25 441 1.9E-124 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_20160 075bc5e7fd040fd380023f9a9f4e127e 441 Gene3D G3DSA:2.40.170.10 23 441 6.4E-138 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AL538_20160 075bc5e7fd040fd380023f9a9f4e127e 441 SUPERFAMILY SSF56935 23 441 2.14E-130 T 11-10-2018 AL538_20160 075bc5e7fd040fd380023f9a9f4e127e 441 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 436 0.0 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 SUPERFAMILY SSF74653 132 277 2.09E-21 T 11-10-2018 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 Gene3D G3DSA:3.30.1150.10 153 278 3.8E-31 T 11-10-2018 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 201 277 1.9E-17 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 200 277 1.6E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 195 216 6.1E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 131 141 6.1E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_19435 f900c1461ec18a9a6f6d30c85499ce5a 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 216 234 6.1E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_18570 5587be71433aa842fd8e7ff749ffa7e4 228 Pfam PF13391 HNH endonuclease 117 169 6.6E-8 T 11-10-2018 IPR003615 HNH nuclease AL538_08410 cf92a82a93a9f908852858879082b726 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 7.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 Gene3D G3DSA:1.10.10.10 148 211 5.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08410 cf92a82a93a9f908852858879082b726 211 Pfam PF00072 Response regulator receiver domain 7 120 5.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08410 cf92a82a93a9f908852858879082b726 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 SUPERFAMILY SSF52172 4 173 6.19E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL538_08410 cf92a82a93a9f908852858879082b726 211 SMART SM00421 147 204 7.3E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_08410 cf92a82a93a9f908852858879082b726 211 SMART SM00448 5 119 8.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08410 cf92a82a93a9f908852858879082b726 211 Gene3D G3DSA:3.40.50.2300 3 132 1.9E-27 T 11-10-2018 AL538_16465 eb023a5159a9649591d0c5d727b0c448 158 Pfam PF00583 Acetyltransferase (GNAT) family 29 137 2.6E-12 T 11-10-2018 IPR000182 GNAT domain AL538_16465 eb023a5159a9649591d0c5d727b0c448 158 SUPERFAMILY SSF55729 11 142 5.24E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_16465 eb023a5159a9649591d0c5d727b0c448 158 Gene3D G3DSA:3.40.630.30 5 149 9.3E-21 T 11-10-2018 AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0016 T 11-10-2018 AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 Gene3D G3DSA:3.40.50.720 3 241 3.1E-74 T 11-10-2018 AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 SUPERFAMILY SSF51735 3 240 1.03E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.4E-58 T 11-10-2018 AL538_14035 7fdb4e2c8f5ba8eba5ba9625acddc2f6 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 3.1E-127 T 11-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_00050 eed2a1b9eae95d975e1a399bfccb9d6a 456 Pfam PF01554 MatE 243 404 6.0E-39 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_00050 eed2a1b9eae95d975e1a399bfccb9d6a 456 Pfam PF01554 MatE 17 176 3.8E-36 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_00050 eed2a1b9eae95d975e1a399bfccb9d6a 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 4.4E-122 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_00050 eed2a1b9eae95d975e1a399bfccb9d6a 456 PIRSF PIRSF006603 5 454 2.1E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 Pfam PF12833 Helix-turn-helix domain 226 304 4.5E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 SUPERFAMILY SSF52317 5 182 6.62E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_22300 62062a3a3b01606daafe4dba954141aa 307 Gene3D G3DSA:3.40.50.880 1 191 6.3E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_22300 62062a3a3b01606daafe4dba954141aa 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 256 298 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 SMART SM00342 219 302 1.9E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 Gene3D G3DSA:1.10.10.60 200 304 1.4E-25 T 11-10-2018 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 SUPERFAMILY SSF46689 255 305 1.3E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 SUPERFAMILY SSF46689 203 253 4.17E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22300 62062a3a3b01606daafe4dba954141aa 307 Pfam PF01965 DJ-1/PfpI family 53 164 1.4E-11 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AL538_01690 a29939fd0664f786bb05e852ab6bdde4 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 7.1E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_01690 a29939fd0664f786bb05e852ab6bdde4 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 5.1E-13 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL538_01690 a29939fd0664f786bb05e852ab6bdde4 310 SUPERFAMILY SSF161098 106 291 1.57E-25 T 11-10-2018 IPR035906 MetI-like superfamily AL538_01690 a29939fd0664f786bb05e852ab6bdde4 310 Gene3D G3DSA:1.10.3720.10 99 306 3.9E-17 T 11-10-2018 IPR035906 MetI-like superfamily AL538_03060 59398542759d155b018245bee59fb0f9 488 SUPERFAMILY SSF109604 271 469 3.05E-34 T 11-10-2018 AL538_03060 59398542759d155b018245bee59fb0f9 488 Pfam PF01966 HD domain 296 430 2.4E-18 T 11-10-2018 IPR006674 HD domain AL538_03060 59398542759d155b018245bee59fb0f9 488 SMART SM00471 290 440 2.6E-8 T 11-10-2018 IPR003607 HD/PDEase domain AL538_03060 59398542759d155b018245bee59fb0f9 488 Gene3D G3DSA:1.10.3210.10 269 484 9.5E-77 T 11-10-2018 AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 Gene3D G3DSA:3.40.190.10 32 278 1.6E-124 T 11-10-2018 AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.1E-85 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 PIRSF PIRSF002741 21 512 2.7E-95 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 SUPERFAMILY SSF53850 26 516 1.21E-130 T 11-10-2018 AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 Gene3D G3DSA:3.10.105.10 279 494 1.6E-124 T 11-10-2018 AL538_09905 1ef6d474ee353e5ee7d427c3f739eb5f 517 Gene3D G3DSA:3.90.76.10 57 165 1.6E-124 T 11-10-2018 AL538_22095 bac21ed850c02d8038542198ee0abfd5 351 Pfam PF00534 Glycosyl transferases group 1 174 325 1.5E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_22095 bac21ed850c02d8038542198ee0abfd5 351 SUPERFAMILY SSF53756 2 348 2.47E-69 T 11-10-2018 AL538_22095 bac21ed850c02d8038542198ee0abfd5 351 Gene3D G3DSA:3.40.50.2000 182 336 1.2E-39 T 11-10-2018 AL538_22095 bac21ed850c02d8038542198ee0abfd5 351 Gene3D G3DSA:3.40.50.2000 5 181 1.1E-14 T 11-10-2018 AL538_22095 bac21ed850c02d8038542198ee0abfd5 351 Pfam PF13439 Glycosyltransferase Family 4 72 162 1.7E-12 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 Gene3D G3DSA:1.10.357.10 2 208 1.3E-53 T 11-10-2018 AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 SUPERFAMILY SSF46689 3 74 2.67E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 SUPERFAMILY SSF48498 80 207 3.56E-39 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_16260 4001f67360e3d33e5599590a5912f0bc 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 Gene3D G3DSA:1.10.260.40 1 59 5.1E-23 T 11-10-2018 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.8E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.2E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.2E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 Gene3D G3DSA:3.40.50.2300 160 289 7.7E-86 T 11-10-2018 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 Gene3D G3DSA:3.40.50.2300 62 308 7.7E-86 T 11-10-2018 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 SMART SM00354 1 71 2.1E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 Pfam PF13377 Periplasmic binding protein-like domain 168 328 4.0E-37 T 11-10-2018 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 SUPERFAMILY SSF47413 2 59 1.2E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_18840 eba9d1b5a0ce2fcd6c77f68c74f3dbe5 334 SUPERFAMILY SSF53822 61 329 3.37E-87 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_25590 1c7bdd28d6e47546ce1d0181b07a1939 202 SUPERFAMILY SSF52833 40 195 2.12E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25590 1c7bdd28d6e47546ce1d0181b07a1939 202 Gene3D G3DSA:3.40.30.10 32 200 4.7E-30 T 11-10-2018 AL538_25590 1c7bdd28d6e47546ce1d0181b07a1939 202 Pfam PF08534 Redoxin 51 195 5.1E-16 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 SMART SM00382 142 334 5.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 SUPERFAMILY SSF47917 352 466 2.88E-51 T 11-10-2018 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.045 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 SUPERFAMILY SSF52540 77 355 5.47E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 SUPERFAMILY SSF50615 1 75 2.56E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Gene3D G3DSA:1.10.1140.10 352 467 2.3E-54 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Gene3D G3DSA:3.40.50.300 76 351 1.4E-110 T 11-10-2018 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.4E-249 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 4.5E-60 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Gene3D G3DSA:2.40.10.170 2 75 6.2E-30 T 11-10-2018 AL538_09590 585bf2804cda9e9ede3ab36d243a3ae5 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.3E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_11495 e89bf73f1c51b243fbda99eb3230bb6d 194 Gene3D G3DSA:3.40.50.1820 6 194 6.9E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_11495 e89bf73f1c51b243fbda99eb3230bb6d 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 2.2E-70 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL538_11495 e89bf73f1c51b243fbda99eb3230bb6d 194 SUPERFAMILY SSF53474 6 192 3.27E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 SUPERFAMILY SSF51735 130 297 8.0E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 Pfam PF13602 Zinc-binding dehydrogenase 215 334 2.6E-9 T 11-10-2018 AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 Gene3D G3DSA:3.90.180.10 20 321 1.3E-64 T 11-10-2018 AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 104 1.1E-6 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 Gene3D G3DSA:3.40.50.720 149 270 1.3E-64 T 11-10-2018 AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 SUPERFAMILY SSF50129 20 159 1.98E-24 T 11-10-2018 IPR011032 GroES-like superfamily AL538_19895 77d8a9a6f085d39de788e043c2396e48 336 SMART SM00829 21 334 1.5E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_26185 6d4b1e4d159bd38793e0b7e021cca70e 255 Pfam PF02104 SURF1 family 24 230 1.3E-19 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 9.6E-27 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 Gene3D G3DSA:1.10.3730.10 165 272 5.4E-35 T 11-10-2018 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.2E-75 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 1.6E-30 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 PIRSF PIRSF000193 3 270 7.1E-79 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 SUPERFAMILY SSF51735 4 160 7.25E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 SUPERFAMILY SSF48179 163 270 1.48E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 Gene3D G3DSA:3.40.50.720 2 164 3.6E-52 T 11-10-2018 AL538_07005 9fcbe89751db62ba38c67efc215a391c 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.522 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 194 6.6E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 Gene3D G3DSA:1.20.1050.10 84 198 1.4E-33 T 11-10-2018 AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 Gene3D G3DSA:3.40.30.10 1 83 8.2E-34 T 11-10-2018 AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 9.3E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 SUPERFAMILY SSF52833 1 77 1.0E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_22050 96301a4c19050d9f581df1a3ce70a8a8 205 SUPERFAMILY SSF47616 82 199 5.85E-20 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 1.8E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.8E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 1.8E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 SUPERFAMILY SSF51905 3 208 3.24E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_27350 9e96b62658b707c24047c1964f88de6e 416 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 322 1.4E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.4E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.4E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.4E-9 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 Gene3D G3DSA:3.50.50.100 1 392 3.5E-101 T 11-10-2018 AL538_27350 9e96b62658b707c24047c1964f88de6e 416 SUPERFAMILY SSF51905 161 329 4.67E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 SUPERFAMILY SSF103088 203 321 3.4E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 Pfam PF01389 OmpA-like transmembrane domain 28 191 1.3E-25 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 Pfam PF00691 OmpA family 222 315 2.2E-23 T 11-10-2018 IPR006665 OmpA-like domain AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 SUPERFAMILY SSF56925 27 192 1.65E-31 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 Gene3D G3DSA:3.30.1330.60 193 326 8.9E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 304 324 1.4E-5 T 11-10-2018 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 266 283 1.4E-5 T 11-10-2018 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 284 303 1.4E-5 T 11-10-2018 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 PRINTS PR01021 OMPA domain signature 251 266 2.0E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 PRINTS PR01021 OMPA domain signature 266 282 2.0E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_04465 dbb5b0599b65060bc1c2a9b6da138969 330 Gene3D G3DSA:2.40.160.20 24 189 9.7E-37 T 11-10-2018 AL538_12000 6f0043c689ef371255fef375e1808750 168 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 6.1E-49 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 9.4E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.762 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_12000 6f0043c689ef371255fef375e1808750 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 Gene3D G3DSA:1.10.490.80 592 695 8.5E-10 T 11-10-2018 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 11-10-2018 IPR025505 FHIPEP conserved site AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 Gene3D G3DSA:1.10.8.540 502 589 5.8E-13 T 11-10-2018 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 1.9E-236 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 PIRSF PIRSF005419 2 696 9.3E-222 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 Gene3D G3DSA:3.40.30.60 358 501 1.4E-44 T 11-10-2018 AL538_21335 ebb38c18e00e2fb57bfc58c34e8b881d 696 Pfam PF00771 FHIPEP family 25 687 5.3E-242 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Gene3D G3DSA:3.40.50.1760 176 313 6.4E-107 T 11-10-2018 IPR037013 Glutathione synthase, substrate-binding domain superfamily GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Pfam PF03199 Eukaryotic glutathione synthase 200 308 8.9E-19 T 11-10-2018 IPR004887 Glutathione synthase, substrate-binding domain GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Gene3D G3DSA:3.30.470.20 46 476 6.4E-107 T 11-10-2018 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 SUPERFAMILY SSF52440 199 309 3.02E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Gene3D G3DSA:3.30.1490.80 12 429 6.4E-107 T 11-10-2018 IPR014049 Glutathione synthase, N-terminal, eukaryotic GO:0004363|GO:0005524 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Gene3D G3DSA:1.10.1080.10 58 348 6.4E-107 T 11-10-2018 IPR014042 Glutathione synthase, alpha-helical GO:0004363|GO:0005524|GO:0006750|GO:0016874 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Gene3D G3DSA:3.30.1490.50 349 417 6.4E-107 T 11-10-2018 IPR014709 Glutathione synthase, C-terminal, eukaryotic KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 SUPERFAMILY SSF56059 10 478 8.12E-93 T 11-10-2018 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 Pfam PF03917 Eukaryotic glutathione synthase, ATP binding domain 11 478 1.2E-67 T 11-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_21830 03fb689350200ad8808e2f2693a3e0c9 480 PIRSF PIRSF001558 2 479 2.6E-82 T 11-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SUPERFAMILY SSF56731 121 431 2.75E-104 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Gene3D G3DSA:3.40.1360.10 247 373 2.3E-37 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Gene3D G3DSA:1.10.860.10 452 594 6.0E-59 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SMART SM00400 36 90 3.0E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SMART SM00493 265 336 3.5E-14 T 11-10-2018 IPR006171 TOPRIM domain AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 PIRSF PIRSF002811 2 593 1.2E-146 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Pfam PF10410 DnaB-helicase binding domain of primase 376 430 8.3E-5 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 6.1E-42 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SUPERFAMILY SSF57783 4 101 1.58E-38 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Gene3D G3DSA:1.20.50.20 374 432 1.8E-6 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Pfam PF08278 DNA primase DnaG DnaB-binding 465 588 1.1E-36 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SMART SM00766 464 589 4.1E-58 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Hamap MF_00974 DNA primase [dnaG]. 4 590 28.941 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Gene3D G3DSA:3.90.580.10 1 102 7.4E-40 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Pfam PF13155 Toprim-like 269 355 6.9E-14 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 4.0E-143 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 SUPERFAMILY SSF117023 461 592 3.53E-45 T 11-10-2018 AL538_11375 227030844e3a036c25769dbcc0ab8bcb 594 Gene3D G3DSA:3.90.980.10 121 246 5.8E-46 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AL538_22225 bb238be1a1daa266f3ed26d13dc81312 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 3.7E-66 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AL538_22225 bb238be1a1daa266f3ed26d13dc81312 276 SUPERFAMILY SSF52402 2 276 1.45E-80 T 11-10-2018 AL538_22225 bb238be1a1daa266f3ed26d13dc81312 276 Pfam PF02540 NAD synthase 21 270 8.1E-64 T 11-10-2018 IPR022310 NAD/GMP synthase AL538_22225 bb238be1a1daa266f3ed26d13dc81312 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.527 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AL538_22225 bb238be1a1daa266f3ed26d13dc81312 276 Gene3D G3DSA:3.40.50.620 1 276 3.7E-82 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_02080 b1ce01542bdc07215cb66637124a2154 791 SUPERFAMILY SSF82866 158 382 2.35E-31 T 11-10-2018 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 Gene3D G3DSA:1.20.1640.10 182 396 5.0E-12 T 11-10-2018 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 Pfam PF03176 MMPL family 590 772 3.1E-14 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 Pfam PF03176 MMPL family 111 385 2.2E-21 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 SUPERFAMILY SSF82866 573 766 2.49E-31 T 11-10-2018 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 Gene3D G3DSA:1.20.1640.10 588 779 4.3E-17 T 11-10-2018 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 PRINTS PR00702 Acriflavin resistance protein family signature 225 248 4.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 PRINTS PR00702 Acriflavin resistance protein family signature 356 379 4.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_02080 b1ce01542bdc07215cb66637124a2154 791 PRINTS PR00702 Acriflavin resistance protein family signature 281 305 4.4E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Pfam PF01751 Toprim domain 4 132 1.3E-16 T 11-10-2018 IPR006171 TOPRIM domain AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 SMART SM00493 2 125 4.3E-28 T 11-10-2018 IPR006171 TOPRIM domain AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 630 1.3E-239 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 SMART SM00437 284 563 4.9E-91 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 SUPERFAMILY SSF56712 3 612 8.24E-185 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Pfam PF01131 DNA topoisomerase 159 598 1.1E-116 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Gene3D G3DSA:1.10.290.10 293 422 7.4E-167 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 651 64.444 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Gene3D G3DSA:2.70.20.10 218 493 7.4E-167 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 SMART SM00436 129 224 1.1E-30 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Gene3D G3DSA:3.40.50.140 2 157 7.9E-61 T 11-10-2018 AL538_04620 744353368817bbc6a84ec11c8d9815ca 654 Gene3D G3DSA:1.10.460.10 163 605 7.4E-167 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 Gene3D G3DSA:1.20.1250.20 1 222 3.6E-72 T 11-10-2018 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 Gene3D G3DSA:1.20.1250.20 223 455 6.7E-61 T 11-10-2018 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 227 440 5.9E-48 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 214 4.6E-58 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 Pfam PF00854 POT family 231 405 3.3E-31 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 Pfam PF00854 POT family 85 197 1.8E-29 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AL538_13640 b70de51c8488a47f43907ab3d787fb2b 462 SUPERFAMILY SSF103473 7 435 1.1E-40 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.0E-55 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.4E-25 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.142 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55653 60 148 1.02E-25 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 Gene3D G3DSA:3.10.430.100 61 149 1.3E-30 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL538_07725 5535257d2b31225bf4f66bb579f60fea 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SUPERFAMILY SSF55073 488 642 1.57E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 638 1.5E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SMART SM00028 252 285 47.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SMART SM00028 168 201 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SMART SM00028 208 241 0.81 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SMART SM00028 373 406 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Pfam PF13181 Tetratricopeptide repeat 255 281 0.05 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Gene3D G3DSA:3.30.70.270 470 642 2.6E-44 T 11-10-2018 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SUPERFAMILY SSF48452 164 283 1.14E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Gene3D G3DSA:1.25.40.10 253 456 2.3E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SMART SM00267 472 642 1.2E-44 T 11-10-2018 IPR000160 GGDEF domain AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Pfam PF13424 Tetratricopeptide repeat 172 239 2.7E-7 T 11-10-2018 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 1.1E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_27005 34ed070743a1e164a82fbad42d19131d 644 Gene3D G3DSA:1.25.40.10 67 252 1.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_27005 34ed070743a1e164a82fbad42d19131d 644 SUPERFAMILY SSF48452 254 408 3.4E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_06185 e023703fe84db6be93dce4a52060d71f 151 SUPERFAMILY SSF74942 84 151 5.36E-17 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AL538_06185 e023703fe84db6be93dce4a52060d71f 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.4E-20 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AL538_06185 e023703fe84db6be93dce4a52060d71f 151 Gene3D G3DSA:3.30.300.70 1 80 1.2E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AL538_06185 e023703fe84db6be93dce4a52060d71f 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.01 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AL538_06185 e023703fe84db6be93dce4a52060d71f 151 SUPERFAMILY SSF75420 2 83 1.31E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AL538_06185 e023703fe84db6be93dce4a52060d71f 151 Pfam PF02576 RimP N-terminal domain 12 83 9.4E-29 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AL538_22540 0e257876d2494a73d02f0d6de578ac27 329 Gene3D G3DSA:3.40.50.720 1 134 2.7E-37 T 11-10-2018 AL538_22540 0e257876d2494a73d02f0d6de578ac27 329 SUPERFAMILY SSF55347 127 289 5.89E-21 T 11-10-2018 AL538_22540 0e257876d2494a73d02f0d6de578ac27 329 Gene3D G3DSA:3.30.360.10 135 325 3.4E-50 T 11-10-2018 AL538_22540 0e257876d2494a73d02f0d6de578ac27 329 SUPERFAMILY SSF51735 2 134 4.1E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22540 0e257876d2494a73d02f0d6de578ac27 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 8.6E-25 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 SUPERFAMILY SSF100950 78 234 2.34E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.3E-45 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.3E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 Gene3D G3DSA:1.10.10.10 1 56 2.9E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 SMART SM00420 9 61 4.0E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 SUPERFAMILY SSF46785 4 66 1.8E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_11295 45b2bb752551ea90d2118bc649379d0b 253 SMART SM01134 73 234 8.4E-58 T 11-10-2018 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF47794 356 415 9.89E-17 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL538_06180 ced797c6513670806410b8b4968e9798 495 SMART SM00316 133 198 4.1E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_06180 ced797c6513670806410b8b4968e9798 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.1E-8 T 11-10-2018 AL538_06180 ced797c6513670806410b8b4968e9798 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 9.0E-126 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AL538_06180 ced797c6513670806410b8b4968e9798 495 Pfam PF08529 NusA N-terminal domain 4 123 1.0E-36 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:3.30.1480.10 1 129 1.1E-44 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF47794 429 492 1.08E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_06180 ced797c6513670806410b8b4968e9798 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF50249 132 199 1.2E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_06180 ced797c6513670806410b8b4968e9798 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.821 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF54814 201 278 9.81E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:1.10.150.20 431 490 7.9E-25 T 11-10-2018 AL538_06180 ced797c6513670806410b8b4968e9798 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 6.6E-22 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL538_06180 ced797c6513670806410b8b4968e9798 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.5E-18 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:2.40.50.140 135 198 3.6E-17 T 11-10-2018 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL538_06180 ced797c6513670806410b8b4968e9798 495 Gene3D G3DSA:1.10.150.20 352 421 1.4E-29 T 11-10-2018 AL538_06180 ced797c6513670806410b8b4968e9798 495 SUPERFAMILY SSF69705 1 126 1.15E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 PIRSF PIRSF000545 1 307 9.0E-146 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 Gene3D G3DSA:3.40.50.300 1 307 2.8E-94 T 11-10-2018 AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 SUPERFAMILY SSF52540 3 306 1.81E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 228 1.3E-12 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 4.0E-144 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL538_08715 14a09b2ba4f47ce410eea4ec1a3128e7 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 178.358 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AL538_15860 530f140692c77267a030bf9de535d4bf 460 SMART SM00840 341 402 1.2E-27 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 SUPERFAMILY SSF47323 316 459 2.48E-40 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_15860 530f140692c77267a030bf9de535d4bf 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 Gene3D G3DSA:1.20.120.640 306 460 1.7E-51 T 11-10-2018 AL538_15860 530f140692c77267a030bf9de535d4bf 460 Gene3D G3DSA:3.40.50.620 1 305 4.5E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_15860 530f140692c77267a030bf9de535d4bf 460 SUPERFAMILY SSF52374 1 313 1.05E-103 T 11-10-2018 AL538_15860 530f140692c77267a030bf9de535d4bf 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.5E-141 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.234 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 Pfam PF09190 DALR domain 341 402 1.1E-24 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AL538_15860 530f140692c77267a030bf9de535d4bf 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 3.3E-191 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 1.8E-78 T 11-10-2018 IPR004494 MauM/NapG ferredoxin-type protein AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.74 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 Gene3D G3DSA:3.30.70.20 60 136 3.7E-10 T 11-10-2018 AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 Gene3D G3DSA:3.30.70.20 139 223 8.4E-10 T 11-10-2018 AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 5.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 0.0012 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_17420 4f3b0ad758261ede4d49751d244e7f15 256 SUPERFAMILY SSF54862 63 209 1.05E-24 T 11-10-2018 AL538_03715 03077a42618f4fc7479ed3ac5d0d39fd 110 Gene3D G3DSA:3.30.70.100 42 102 6.3E-5 T 11-10-2018 AL538_03715 03077a42618f4fc7479ed3ac5d0d39fd 110 SUPERFAMILY SSF55008 45 83 9.21E-5 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_16170 08338780ae8ddd0e34a8ec5902922428 244 SUPERFAMILY SSF53448 2 223 2.32E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_16170 08338780ae8ddd0e34a8ec5902922428 244 Gene3D G3DSA:3.90.550.10 1 200 1.4E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_16170 08338780ae8ddd0e34a8ec5902922428 244 Pfam PF00535 Glycosyl transferase family 2 5 114 2.8E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 SMART SM00448 193 318 4.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 Pfam PF00072 Response regulator receiver domain 195 316 7.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 Gene3D G3DSA:3.40.50.2300 180 322 2.1E-29 T 11-10-2018 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 PIRSF PIRSF002867 1 324 4.9E-103 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 SMART SM00260 14 160 9.9E-26 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 Gene3D G3DSA:2.40.50.180 44 160 8.6E-30 T 11-10-2018 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 SUPERFAMILY SSF50341 7 165 3.14E-33 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 SUPERFAMILY SSF52172 193 320 9.96E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 Gene3D G3DSA:2.30.30.40 36 154 8.6E-30 T 11-10-2018 AL538_23580 ba560999a695fbdb650531391ed3ae7f 326 Pfam PF01584 CheW-like domain 37 162 2.6E-30 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 SUPERFAMILY SSF52402 189 412 6.84E-58 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.44 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.2E-83 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Gene3D G3DSA:3.40.50.880 6 201 5.4E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 7.1E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_12450 60beee4837a5113909469b6a2a2d7942 517 SUPERFAMILY SSF52317 9 200 8.1E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 SUPERFAMILY SSF54810 397 517 5.75E-51 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Gene3D G3DSA:3.30.300.10 398 517 1.0E-50 T 11-10-2018 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Pfam PF02540 NAD synthase 212 285 1.0E-7 T 11-10-2018 IPR022310 NAD/GMP synthase AL538_12450 60beee4837a5113909469b6a2a2d7942 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.9E-156 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AL538_12450 60beee4837a5113909469b6a2a2d7942 517 Gene3D G3DSA:3.40.50.620 202 397 4.0E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_17125 8ab555d5d51e2bb10891baa0f1acddbe 370 Pfam PF13439 Glycosyltransferase Family 4 25 183 1.4E-17 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL538_17125 8ab555d5d51e2bb10891baa0f1acddbe 370 SUPERFAMILY SSF53756 15 362 3.43E-72 T 11-10-2018 AL538_17125 8ab555d5d51e2bb10891baa0f1acddbe 370 Gene3D G3DSA:3.40.50.2000 180 352 8.8E-63 T 11-10-2018 AL538_17125 8ab555d5d51e2bb10891baa0f1acddbe 370 Gene3D G3DSA:3.40.50.2000 38 361 8.8E-63 T 11-10-2018 AL538_17125 8ab555d5d51e2bb10891baa0f1acddbe 370 Pfam PF00534 Glycosyl transferases group 1 191 338 9.4E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_19820 5df54aabead321bf8adc02de427f4a08 391 Gene3D G3DSA:3.40.640.10 62 284 2.2E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_19820 5df54aabead321bf8adc02de427f4a08 391 Pfam PF00155 Aminotransferase class I and II 72 376 6.8E-36 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_19820 5df54aabead321bf8adc02de427f4a08 391 SUPERFAMILY SSF53383 21 389 1.93E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_19820 5df54aabead321bf8adc02de427f4a08 391 Gene3D G3DSA:3.90.1150.10 27 378 2.2E-114 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20825 ba7dc89a237e511288707bb97a093a85 179 Gene3D G3DSA:3.90.79.10 2 176 8.7E-41 T 11-10-2018 AL538_20825 ba7dc89a237e511288707bb97a093a85 179 Pfam PF00293 NUDIX domain 49 152 2.0E-6 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_20825 ba7dc89a237e511288707bb97a093a85 179 SUPERFAMILY SSF55811 4 177 2.57E-36 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 560 578 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 365 654 5.3E-111 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 SUPERFAMILY SSF55594 1 88 4.97E-17 T 11-10-2018 IPR035895 HPr-like superfamily AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Gene3D G3DSA:3.50.30.10 122 343 5.6E-42 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 560 575 4.4E-21 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 625 4.4E-21 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 577 592 4.4E-21 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 406 425 4.4E-21 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Gene3D G3DSA:3.20.20.60 348 687 1.2E-111 T 11-10-2018 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 SUPERFAMILY SSF55804 690 831 4.32E-31 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 119 677 5.0E-147 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 692 830 4.6E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-6 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.5E-6 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.5E-6 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 SUPERFAMILY SSF51621 367 662 4.59E-99 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 SUPERFAMILY SSF47831 144 255 4.18E-16 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Pfam PF00381 PTS HPr component phosphorylation site 6 84 4.0E-14 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Gene3D G3DSA:3.30.1340.10 1 89 4.1E-15 T 11-10-2018 IPR035895 HPr-like superfamily AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Pfam PF05524 PEP-utilising enzyme, N-terminal 120 238 2.1E-12 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Gene3D G3DSA:3.40.930.10 688 831 3.0E-32 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 SUPERFAMILY SSF52009 237 353 7.06E-23 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Pfam PF00391 PEP-utilising enzyme, mobile domain 265 338 4.7E-16 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 Gene3D G3DSA:1.10.274.10 138 258 5.6E-42 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AL538_14990 cd92455ebdff3e02c7f303c3c1bc0ed8 835 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 297 308 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL538_05760 c8dce49dda71ccc7070124364d109241 445 Pfam PF00583 Acetyltransferase (GNAT) family 333 417 1.6E-6 T 11-10-2018 IPR000182 GNAT domain AL538_05760 c8dce49dda71ccc7070124364d109241 445 SUPERFAMILY SSF55729 300 425 1.57E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_05760 c8dce49dda71ccc7070124364d109241 445 Gene3D G3DSA:3.40.630.30 297 445 6.5E-35 T 11-10-2018 AL538_05760 c8dce49dda71ccc7070124364d109241 445 PIRSF PIRSF000423 1 445 7.9E-203 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL538_05760 c8dce49dda71ccc7070124364d109241 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 221.05 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL538_05760 c8dce49dda71ccc7070124364d109241 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 6.0E-199 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AL538_05760 c8dce49dda71ccc7070124364d109241 445 Pfam PF00696 Amino acid kinase family 25 270 1.3E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_05760 c8dce49dda71ccc7070124364d109241 445 Gene3D G3DSA:3.40.1160.10 7 296 1.1E-84 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_05760 c8dce49dda71ccc7070124364d109241 445 SUPERFAMILY SSF53633 4 294 1.19E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SUPERFAMILY SSF57783 675 718 4.93E-5 T 11-10-2018 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Gene3D G3DSA:3.40.50.140 1 154 3.2E-47 T 11-10-2018 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 684 722 1.2E-8 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 633 666 1.1E-10 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SMART SM00493 1 126 1.1E-13 T 11-10-2018 IPR006171 TOPRIM domain AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Gene3D G3DSA:1.10.460.10 160 615 5.3E-125 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Gene3D G3DSA:1.10.290.10 284 415 5.3E-125 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SMART SM00436 126 221 3.2E-8 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Gene3D G3DSA:3.30.65.10 621 676 3.5E-5 T 11-10-2018 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SUPERFAMILY SSF56712 1 620 5.76E-140 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SUPERFAMILY SSF57783 629 665 3.4E-9 T 11-10-2018 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Pfam PF01131 DNA topoisomerase 156 606 2.3E-85 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 7.5E-18 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 7.5E-18 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 401 417 7.5E-18 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 7.5E-18 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 528 542 7.5E-18 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Pfam PF01751 Toprim domain 3 131 8.1E-12 T 11-10-2018 IPR006171 TOPRIM domain AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 SMART SM00437 275 572 5.6E-49 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 Gene3D G3DSA:2.70.20.10 215 488 5.3E-125 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 675 1.3E-157 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AL538_04285 3a8fb68473feae6c63baa0122a37b392 734 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 327 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 176 199 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 215 234 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 110 130 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 90 107 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 241 260 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 17 34 1.5E-48 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 262 1.4E-45 T 11-10-2018 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 Gene3D G3DSA:3.40.50.720 1 263 3.3E-67 T 11-10-2018 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 14 262 3.6E-93 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 AL538_14140 ffb3d09601027c2183c9240188e1137b 263 SUPERFAMILY SSF51735 9 262 6.3E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 SUPERFAMILY SSF56047 2 129 4.58E-44 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 Pfam PF00410 Ribosomal protein S8 5 129 5.3E-47 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1490.10 73 130 3.3E-25 T 11-10-2018 AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 11-10-2018 AL538_10895 ce7a6130fe6694bc53b8dc869675ec10 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.099 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_04890 7581d8839036da9b44da5744f478f6de 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.23 T 11-10-2018 IPR022990 Uncharacterised protein family UPF0115 AL538_04890 7581d8839036da9b44da5744f478f6de 176 Gene3D G3DSA:3.30.1370.110 49 175 2.5E-27 T 11-10-2018 AL538_04890 7581d8839036da9b44da5744f478f6de 176 SMART SM00463 94 172 1.5E-15 T 11-10-2018 IPR002625 Smr domain AL538_04890 7581d8839036da9b44da5744f478f6de 176 Pfam PF01713 Smr domain 97 171 2.0E-17 T 11-10-2018 IPR002625 Smr domain AL538_04890 7581d8839036da9b44da5744f478f6de 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 11-10-2018 IPR036063 Smr domain superfamily AL538_07060 d871631e12d3f115f009761c650cf523 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_07060 d871631e12d3f115f009761c650cf523 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.5E-79 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AL538_07060 d871631e12d3f115f009761c650cf523 379 Gene3D G3DSA:1.10.530.10 190 370 1.8E-49 T 11-10-2018 AL538_07060 d871631e12d3f115f009761c650cf523 379 SUPERFAMILY SSF53955 186 371 2.73E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_07060 d871631e12d3f115f009761c650cf523 379 Pfam PF01464 Transglycosylase SLT domain 211 332 5.0E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_15475 cb071cd017031007ce07550f29ae47fa 269 SUPERFAMILY SSF56529 96 267 9.29E-35 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_15475 cb071cd017031007ce07550f29ae47fa 269 Pfam PF10370 Domain of unknown function (DUF2437) 26 73 6.3E-7 T 11-10-2018 IPR018833 Domain of unknown function DUF2437 AL538_15475 cb071cd017031007ce07550f29ae47fa 269 Gene3D G3DSA:3.90.850.10 80 268 9.4E-39 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_15475 cb071cd017031007ce07550f29ae47fa 269 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 267 1.3E-31 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL538_23680 cc7444d2475499c495a32910be9a09c0 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 3.8E-56 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_23680 cc7444d2475499c495a32910be9a09c0 262 SUPERFAMILY SSF52096 5 261 4.42E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_23680 cc7444d2475499c495a32910be9a09c0 262 Gene3D G3DSA:3.90.226.10 4 262 1.4E-79 T 11-10-2018 AL538_23680 cc7444d2475499c495a32910be9a09c0 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL538_19860 b015ea6a56c65acae421de733bf9694b 168 Pfam PF13673 Acetyltransferase (GNAT) domain 88 159 6.1E-10 T 11-10-2018 IPR000182 GNAT domain AL538_19860 b015ea6a56c65acae421de733bf9694b 168 Gene3D G3DSA:3.40.630.30 1 159 8.9E-32 T 11-10-2018 AL538_19860 b015ea6a56c65acae421de733bf9694b 168 SUPERFAMILY SSF55729 1 156 1.72E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.722 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 Gene3D G3DSA:1.10.520.20 2 106 3.4E-38 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 SUPERFAMILY SSF47928 3 105 9.68E-28 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.6E-64 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.2E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.2E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.2E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.2E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.2E-27 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09605 74fdd406c9aa3775355dfc394b2fd8bc 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 6.0E-52 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_21195 3b787905c7a786398d7be016efd84177 247 Pfam PF04205 FMN-binding domain 141 232 9.8E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_21195 3b787905c7a786398d7be016efd84177 247 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 243 1.5E-44 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL538_21195 3b787905c7a786398d7be016efd84177 247 SMART SM00900 138 236 4.0E-17 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_21195 3b787905c7a786398d7be016efd84177 247 PIRSF PIRSF009437 1 247 1.4E-51 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 AL538_04235 55e761901d2b0c1f88c0881089876ba9 776 SUPERFAMILY SSF52540 384 726 4.99E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04235 55e761901d2b0c1f88c0881089876ba9 776 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 161 349 3.6E-22 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AL538_21945 7926143d6554a2dfc3fc5037b78d8af7 177 Pfam PF01292 Prokaryotic cytochrome b561 9 175 2.7E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL538_21945 7926143d6554a2dfc3fc5037b78d8af7 177 SUPERFAMILY SSF81342 8 175 7.77E-30 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 167 178 2.0E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 147 162 2.0E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 180 195 2.0E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 195 210 2.0E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 SUPERFAMILY SSF46785 142 225 1.32E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 SMART SM00418 145 227 7.1E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 Gene3D G3DSA:1.10.10.10 133 228 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 129 4.4E-20 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 Gene3D G3DSA:3.40.50.2300 1 131 5.4E-36 T 11-10-2018 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 Pfam PF01022 Bacterial regulatory protein, arsR family 152 193 3.7E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 SUPERFAMILY SSF52788 2 129 9.42E-36 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL538_17410 c759cde7417014cbdc6e64303d5c4abe 247 SMART SM00226 4 132 5.8E-24 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 252 5.3E-13 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 4.1E-150 T 11-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 Gene3D G3DSA:1.10.260.40 1 61 1.6E-26 T 11-10-2018 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 Gene3D G3DSA:3.40.50.2300 155 327 3.5E-26 T 11-10-2018 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 SUPERFAMILY SSF53822 61 310 4.71E-38 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 11-10-2018 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 SUPERFAMILY SSF47413 1 58 1.69E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 3.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 Gene3D G3DSA:3.40.50.2300 62 154 2.5E-20 T 11-10-2018 AL538_23940 c06c377ebc49edc281ce27fa0950733c 331 SMART SM00354 1 73 1.5E-27 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 Pfam PF00849 RNA pseudouridylate synthase 68 189 3.7E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 Gene3D G3DSA:3.10.290.10 1 59 2.9E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 Gene3D G3DSA:3.30.70.1560 130 220 4.7E-49 T 11-10-2018 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 SUPERFAMILY SSF55174 4 96 8.41E-12 T 11-10-2018 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 Gene3D G3DSA:3.30.70.580 70 228 4.7E-49 T 11-10-2018 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 SMART SM00363 3 73 1.8E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 3.2E-54 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_03345 c7450992d5ef8b0dd899c7fd6d7abd10 312 SUPERFAMILY SSF55120 68 237 1.87E-42 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_12385 08953058271349bf918d372bac4016c9 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.165 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL538_12385 08953058271349bf918d372bac4016c9 432 SUPERFAMILY SSF53187 106 427 2.07E-101 T 11-10-2018 AL538_12385 08953058271349bf918d372bac4016c9 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 Pfam PF12404 Peptidase 5 81 3.6E-34 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL538_12385 08953058271349bf918d372bac4016c9 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 3.4E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 3.4E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 3.4E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.4E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 3.4E-45 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 Gene3D G3DSA:3.40.630.10 91 432 2.3E-107 T 11-10-2018 AL538_12385 08953058271349bf918d372bac4016c9 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 2.7E-103 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL538_12385 08953058271349bf918d372bac4016c9 432 PIRSF PIRSF036388 1 432 2.5E-223 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF01627 Hpt domain 1134 1205 6.8E-5 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SMART SM00062 33 244 1.3E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SMART SM00062 268 482 0.0066 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.40.190.10 51 233 4.1E-26 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.40.50.2300 980 1113 1.8E-31 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 887 4.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF00072 Response regulator receiver domain 995 1107 2.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SMART SM00388 667 732 1.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.30.565.10 731 892 1.9E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 394 481 6.0E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 843 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.40.190.10 264 478 3.5E-20 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF52172 993 1115 1.04E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SMART SM00448 993 1107 2.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF00512 His Kinase A (phospho-acceptor) domain 667 732 1.3E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF47226 1118 1216 9.94E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF55874 721 892 1.44E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 233 1.2E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SMART SM00387 779 890 6.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF47384 653 733 7.65E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:1.20.120.160 1115 1217 4.7E-9 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF53850 270 481 7.41E-14 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.40.190.10 354 444 3.5E-20 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:3.40.190.10 120 210 4.1E-26 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 SUPERFAMILY SSF53850 53 233 5.61E-25 T 11-10-2018 AL538_23535 578aa3219f3d6cc1e9032b6fc6f2c7d8 1218 Gene3D G3DSA:1.10.287.130 635 730 2.4E-20 T 11-10-2018 AL538_06430 94583c548bff6893fe545188156e38cf 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.866 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL538_06430 94583c548bff6893fe545188156e38cf 300 Gene3D G3DSA:3.30.1300.10 181 283 1.2E-26 T 11-10-2018 AL538_06430 94583c548bff6893fe545188156e38cf 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 6.6E-103 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL538_06430 94583c548bff6893fe545188156e38cf 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 2.0E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_06430 94583c548bff6893fe545188156e38cf 300 Gene3D G3DSA:3.40.50.620 1 179 3.3E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_06430 94583c548bff6893fe545188156e38cf 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.0E-99 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AL538_06430 94583c548bff6893fe545188156e38cf 300 SUPERFAMILY SSF52374 1 280 1.0E-105 T 11-10-2018 AL538_10585 16a3a697773751a20fa2cdbbedd7232a 354 Gene3D G3DSA:3.40.50.720 2 325 2.1E-138 T 11-10-2018 AL538_10585 16a3a697773751a20fa2cdbbedd7232a 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 1.5E-97 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_10585 16a3a697773751a20fa2cdbbedd7232a 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.8E-159 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AL538_10585 16a3a697773751a20fa2cdbbedd7232a 354 Gene3D G3DSA:3.90.25.10 201 334 2.1E-138 T 11-10-2018 AL538_10585 16a3a697773751a20fa2cdbbedd7232a 354 SUPERFAMILY SSF51735 1 337 2.53E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Gene3D G3DSA:3.40.50.10750 529 682 8.3E-134 T 11-10-2018 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.5E-132 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Gene3D G3DSA:3.40.50.10950 398 709 8.3E-134 T 11-10-2018 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Pfam PF07085 DRTGG domain 233 344 2.3E-27 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Gene3D G3DSA:3.40.1390.20 225 365 1.2E-13 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 SUPERFAMILY SSF53659 392 709 1.73E-95 T 11-10-2018 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.8E-125 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Pfam PF13500 AAA domain 3 229 3.2E-50 T 11-10-2018 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 SUPERFAMILY SSF52540 1 240 1.33E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 PIRSF PIRSF006107 1 714 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 SUPERFAMILY SSF75138 229 353 1.96E-24 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AL538_04050 b1f6c33e572bd60d638eb5e681b24f0c 721 Gene3D G3DSA:3.40.50.300 5 217 2.5E-13 T 11-10-2018 AL538_14955 b356db01b8db2a3100cb1ef4bcc1bd5e 356 SUPERFAMILY SSF74653 264 355 1.28E-14 T 11-10-2018 AL538_14955 b356db01b8db2a3100cb1ef4bcc1bd5e 356 Gene3D G3DSA:3.30.1150.10 254 353 9.4E-22 T 11-10-2018 AL538_14955 b356db01b8db2a3100cb1ef4bcc1bd5e 356 Pfam PF06519 TolA C-terminal 254 352 2.7E-34 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AL538_14955 b356db01b8db2a3100cb1ef4bcc1bd5e 356 TIGRFAM TIGR02794 tolA_full: protein TolA 13 353 9.5E-92 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 AL538_03650 05a41cc655883ba89313fd93dd41e500 213 Pfam PF13489 Methyltransferase domain 35 183 1.6E-15 T 11-10-2018 AL538_03650 05a41cc655883ba89313fd93dd41e500 213 Gene3D G3DSA:3.40.50.150 1 192 7.8E-24 T 11-10-2018 AL538_03650 05a41cc655883ba89313fd93dd41e500 213 SUPERFAMILY SSF53335 5 207 1.34E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_20765 aaefd6094b46a21253ea434012b48f64 132 Gene3D G3DSA:2.20.25.10 1 34 4.3E-20 T 11-10-2018 AL538_20765 aaefd6094b46a21253ea434012b48f64 132 Gene3D G3DSA:3.30.300.20 35 132 3.4E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_20765 aaefd6094b46a21253ea434012b48f64 132 Pfam PF02566 OsmC-like protein 29 127 1.0E-16 T 11-10-2018 IPR003718 OsmC/Ohr family AL538_20765 aaefd6094b46a21253ea434012b48f64 132 SUPERFAMILY SSF82784 1 131 1.44E-38 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 82 350 4.1E-49 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 Gene3D G3DSA:1.20.58.930 372 467 6.1E-236 T 11-10-2018 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.58 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 7.6E-268 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 SUPERFAMILY SSF51419 70 352 2.29E-64 T 11-10-2018 IPR029066 PLP-binding barrel AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 1.4E-62 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 Gene3D G3DSA:3.20.20.10 71 355 6.1E-236 T 11-10-2018 IPR029066 PLP-binding barrel AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 Gene3D G3DSA:2.40.37.10 18 576 6.1E-236 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PIRSF PIRSF001336 2 640 3.2E-251 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 1.4E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 1.4E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 1.4E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_20570 be0904f03336a329a4241c3ddd4300d9 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 1.4E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_25200 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 119 437 3.3E-141 T 11-10-2018 AL538_25200 459a3a579052b9fef80e1c0dd26b02cd 454 SUPERFAMILY SSF53850 34 334 8.25E-20 T 11-10-2018 AL538_25200 459a3a579052b9fef80e1c0dd26b02cd 454 Pfam PF13379 NMT1-like family 28 308 1.2E-105 T 11-10-2018 AL538_25200 459a3a579052b9fef80e1c0dd26b02cd 454 Gene3D G3DSA:3.40.190.10 34 432 3.3E-141 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:3.30.470.90 70 318 1.4E-101 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SUPERFAMILY SSF52113 596 669 2.8E-18 T 11-10-2018 IPR036420 BRCT domain superfamily AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SUPERFAMILY SSF47781 405 585 5.19E-60 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SUPERFAMILY SSF56091 4 317 5.12E-124 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:1.10.150.20 433 505 1.8E-29 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SMART SM00292 595 670 1.7E-10 T 11-10-2018 IPR001357 BRCT domain AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 1.8E-4 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SMART SM00532 4 449 4.1E-274 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 668 7.8E-14 T 11-10-2018 IPR001357 BRCT domain AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 8.7E-265 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SUPERFAMILY SSF50249 319 400 9.77E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.38 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:2.20.70.80 392 432 1.3E-19 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 435 7.9E-12 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:1.10.287.610 2 69 3.3E-28 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:2.40.50.140 319 391 4.4E-34 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:1.10.150.20 507 583 1.0E-29 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 7.3E-24 T 11-10-2018 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Gene3D G3DSA:3.40.50.10190 584 670 2.2E-27 T 11-10-2018 IPR036420 BRCT domain superfamily AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 PIRSF PIRSF001604 1 670 4.2E-256 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SMART SM00278 481 500 95.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SMART SM00278 545 564 670.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 SMART SM00278 447 466 23.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 2.2E-35 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AL538_13535 9c4e3cd13137d8760a1bfcc786c3221c 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 3.1E-134 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AL538_14925 a44d5fcc13de963b752e9d657a511f19 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 9.8E-109 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_14925 a44d5fcc13de963b752e9d657a511f19 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.2E-174 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_14925 a44d5fcc13de963b752e9d657a511f19 378 PIRSF PIRSF000267 2 377 6.5E-124 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_20125 0f52568d325008433591eabebaedfdaf 381 PIRSF PIRSF003085 8 380 1.3E-112 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL538_20125 0f52568d325008433591eabebaedfdaf 381 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 365 2.3E-88 T 11-10-2018 AL538_20125 0f52568d325008433591eabebaedfdaf 381 SUPERFAMILY SSF53335 111 369 1.82E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_20125 0f52568d325008433591eabebaedfdaf 381 Gene3D G3DSA:3.40.50.150 109 373 1.5E-95 T 11-10-2018 AL538_21540 380b3f306a756e071ea605a1259d24df 394 SUPERFAMILY SSF116734 2 195 2.94E-27 T 11-10-2018 AL538_21540 380b3f306a756e071ea605a1259d24df 394 Gene3D G3DSA:3.90.220.20 171 372 1.1E-74 T 11-10-2018 AL538_21540 380b3f306a756e071ea605a1259d24df 394 Pfam PF01420 Type I restriction modification DNA specificity domain 204 366 1.8E-9 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL538_21540 380b3f306a756e071ea605a1259d24df 394 Pfam PF01420 Type I restriction modification DNA specificity domain 3 176 7.2E-16 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL538_21540 380b3f306a756e071ea605a1259d24df 394 Gene3D G3DSA:3.90.220.20 3 390 1.1E-74 T 11-10-2018 AL538_21540 380b3f306a756e071ea605a1259d24df 394 SUPERFAMILY SSF116734 180 394 9.65E-37 T 11-10-2018 AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 SUPERFAMILY SSF51206 23 162 2.88E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 Gene3D G3DSA:1.10.10.10 165 247 3.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 SUPERFAMILY SSF46785 165 244 3.76E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.9E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 Gene3D G3DSA:2.60.120.10 43 164 3.7E-48 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 SMART SM00100 30 151 2.3E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 SMART SM00419 187 235 4.3E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_00740 bf59c3e3d03c124b2512e6c840e4b4cd 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 Pfam PF01430 Hsp33 protein 6 272 5.8E-80 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 Gene3D G3DSA:3.55.30.10 1 175 1.8E-63 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 SUPERFAMILY SSF64397 4 231 3.92E-75 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.208 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 Gene3D G3DSA:3.90.1280.10 225 284 6.2E-20 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 SUPERFAMILY SSF118352 223 281 1.83E-18 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 PIRSF PIRSF005261 1 284 4.0E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AL538_10240 6e70d63cb0c0cbeadce32841d7bf46c1 291 Gene3D G3DSA:1.10.287.480 178 224 1.1E-22 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 SUPERFAMILY SSF56322 13 518 1.24E-157 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 2.0E-226 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 Gene3D G3DSA:3.60.120.10 7 521 2.3E-185 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.3E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 Pfam PF00425 chorismate binding enzyme 246 506 3.1E-84 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 3.6E-14 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_03370 147a51752a35dd79d2a8e4ce905977f3 521 PIRSF PIRSF001373 3 521 2.2E-260 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_04815 1ee8a277e9958404e3b40445bdcf6b92 198 Gene3D G3DSA:3.30.70.1070 115 192 6.8E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_04815 1ee8a277e9958404e3b40445bdcf6b92 198 SUPERFAMILY SSF110997 121 194 2.62E-15 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_04815 1ee8a277e9958404e3b40445bdcf6b92 198 Pfam PF05036 Sporulation related domain 122 190 9.6E-12 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 Gene3D G3DSA:3.30.70.1530 19 90 6.2E-25 T 11-10-2018 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 6 193 5.9E-70 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 Pfam PF01514 Secretory protein of YscJ/FliF family 8 187 2.5E-23 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 Gene3D G3DSA:3.30.300.30 92 200 2.8E-40 T 11-10-2018 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.6E-29 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 1.6E-29 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 1.6E-29 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 1.6E-29 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_15160 02d0957f2752c3b266ba3ea8a1e98276 247 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 1.6E-29 T 11-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 7.1E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 7.1E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 7.1E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 7.1E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 Gene3D G3DSA:1.20.5.1030 67 123 1.6E-17 T 11-10-2018 IPR038379 SecE superfamily AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.376 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 1.5E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 1.6E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_08685 3ee09cc9c2fdebe7af4337680f82f23d 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 Gene3D G3DSA:1.10.10.10 1 87 9.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 Gene3D G3DSA:3.40.190.10 89 300 4.9E-38 T 11-10-2018 AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 Pfam PF03466 LysR substrate binding domain 94 303 3.4E-19 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 SUPERFAMILY SSF46785 3 81 1.11E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 SUPERFAMILY SSF53850 89 304 3.44E-30 T 11-10-2018 AL538_15415 941f1a6738d8994f8bc56a6fb19cf1f2 312 Gene3D G3DSA:3.40.190.10 171 276 4.9E-38 T 11-10-2018 AL538_01640 bf1bde69b4c2c0022b8a282c19ed14e7 220 PIRSF PIRSF028063 1 220 1.9E-139 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AL538_01640 bf1bde69b4c2c0022b8a282c19ed14e7 220 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 9.4E-35 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 AL538_14965 463eaca64422cb042038f427c4cf8816 173 Gene3D G3DSA:3.30.1330.60 46 173 1.0E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_14965 463eaca64422cb042038f427c4cf8816 173 SUPERFAMILY SSF103088 57 172 1.83E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_14965 463eaca64422cb042038f427c4cf8816 173 PRINTS PR01021 OMPA domain signature 73 95 1.7E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_14965 463eaca64422cb042038f427c4cf8816 173 PRINTS PR01021 OMPA domain signature 103 118 1.7E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_14965 463eaca64422cb042038f427c4cf8816 173 PRINTS PR01021 OMPA domain signature 118 134 1.7E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_14965 463eaca64422cb042038f427c4cf8816 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 1.2E-44 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AL538_14965 463eaca64422cb042038f427c4cf8816 173 Pfam PF00691 OmpA family 72 167 1.7E-22 T 11-10-2018 IPR006665 OmpA-like domain AL538_14965 463eaca64422cb042038f427c4cf8816 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL538_14965 463eaca64422cb042038f427c4cf8816 173 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 173 30.991 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 267 286 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 Pfam PF00266 Aminotransferase class-V 114 395 1.2E-32 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 7.1E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 Gene3D G3DSA:3.90.1150.10 70 455 4.6E-71 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 SUPERFAMILY SSF53383 58 462 1.06E-67 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_21485 3e132769042e4c34e2f97a2b3c609913 466 Gene3D G3DSA:3.40.640.10 83 353 4.6E-71 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 3.7E-44 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Gene3D G3DSA:3.40.190.10 6 219 2.5E-68 T 11-10-2018 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 2.3E-30 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.277 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Gene3D G3DSA:3.40.190.10 102 191 2.5E-68 T 11-10-2018 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 SUPERFAMILY SSF54913 225 297 2.78E-21 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 SUPERFAMILY SSF53850 5 222 6.33E-66 T 11-10-2018 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Gene3D G3DSA:3.30.70.120 225 298 6.0E-34 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 Pfam PF08029 HisG, C-terminal domain 222 295 2.0E-24 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL538_15800 68b048bda0a3ae72eacc4c3052783dde 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 2.0E-54 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 9.0E-167 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 5.1E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Pfam PF02780 Transketolase, C-terminal domain 544 654 3.3E-14 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 SUPERFAMILY SSF52922 534 663 3.0E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Gene3D G3DSA:3.40.50.970 2 326 2.2E-129 T 11-10-2018 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 SUPERFAMILY SSF52518 5 321 8.3E-116 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Gene3D G3DSA:3.40.50.920 539 664 3.9E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 Gene3D G3DSA:3.40.50.970 327 538 1.2E-84 T 11-10-2018 AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 SMART SM00861 355 527 4.9E-70 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_17715 ae324294bc8b5519f3da10ae173755e2 665 SUPERFAMILY SSF52518 345 527 5.89E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_24555 97a24e5c9e9894d46df27d004877f687 365 Gene3D G3DSA:3.40.47.10 1 361 8.7E-154 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_24555 97a24e5c9e9894d46df27d004877f687 365 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.1E-37 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_24555 97a24e5c9e9894d46df27d004877f687 365 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 8.6E-111 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_24555 97a24e5c9e9894d46df27d004877f687 365 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.7E-28 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_24555 97a24e5c9e9894d46df27d004877f687 365 SUPERFAMILY SSF53901 8 325 2.28E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_24555 97a24e5c9e9894d46df27d004877f687 365 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.414 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Gene3D G3DSA:3.40.228.10 341 413 1.6E-17 T 11-10-2018 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Gene3D G3DSA:2.40.40.20 665 812 1.7E-39 T 11-10-2018 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Gene3D G3DSA:3.40.50.740 414 621 6.3E-52 T 11-10-2018 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 SMART SM00926 50 110 2.4E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.4E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 2.6E-97 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Gene3D G3DSA:3.40.50.740 49 322 4.1E-81 T 11-10-2018 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 SUPERFAMILY SSF50692 636 806 1.68E-35 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 SUPERFAMILY SSF53706 51 692 1.01E-175 T 11-10-2018 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 11-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL538_16690 8063a9c7a22f4aebd814f5e801115d66 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 2.2E-24 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_07185 c66c454c87ab1d1640b307de78d033b6 251 SUPERFAMILY SSF88713 1 242 5.78E-69 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL538_07185 c66c454c87ab1d1640b307de78d033b6 251 Gene3D G3DSA:3.20.20.370 1 243 3.2E-72 T 11-10-2018 AL538_07185 c66c454c87ab1d1640b307de78d033b6 251 Pfam PF04794 YdjC-like protein 2 230 6.1E-54 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like AL538_07185 c66c454c87ab1d1640b307de78d033b6 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 38.135 T 11-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 Gene3D G3DSA:3.30.300.310 458 559 1.0E-29 T 11-10-2018 AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 Gene3D G3DSA:3.40.50.12780 9 457 9.5E-119 T 11-10-2018 AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 SUPERFAMILY SSF56801 13 553 1.57E-150 T 11-10-2018 AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 2.0E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_13865 884e3b932913ec565e7a6a2a566c4478 563 Pfam PF00501 AMP-binding enzyme 29 461 2.8E-108 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 SUPERFAMILY SSF53901 12 291 3.51E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.6E-266 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 SUPERFAMILY SSF53901 296 434 7.97E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 5.8E-63 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 Gene3D G3DSA:3.40.47.10 4 434 6.5E-110 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.3E-35 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 2.3E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL538_04910 f1f2672e892bcc1f337ebd0dfbc922cc 435 PIRSF PIRSF000429 8 435 1.6E-118 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_04455 a170fce82741bf645551a5bba17efb94 104 SUPERFAMILY SSF47413 9 65 6.57E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_04455 a170fce82741bf645551a5bba17efb94 104 Gene3D G3DSA:1.10.260.40 7 88 4.7E-7 T 11-10-2018 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 379 398 3.0E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 413 428 3.0E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 200 217 3.0E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 505 524 3.0E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 295 315 3.0E-38 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 Gene3D G3DSA:3.55.50.30 27 111 1.4E-29 T 11-10-2018 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 Pfam PF00263 Bacterial type II and III secretion system protein 366 526 1.6E-37 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 Gene3D G3DSA:3.30.1370.120 187 292 1.0E-9 T 11-10-2018 IPR038591 NolW-like superfamily AL538_15125 4017f2c6d6c91945454f21559140e52c 623 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 40 527 1.2E-151 T 11-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 Gene3D G3DSA:3.30.1370.120 112 180 5.8E-14 T 11-10-2018 IPR038591 NolW-like superfamily AL538_15125 4017f2c6d6c91945454f21559140e52c 623 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 472 505 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL538_15125 4017f2c6d6c91945454f21559140e52c 623 Pfam PF03958 Bacterial type II/III secretion system short domain 189 292 4.1E-15 T 11-10-2018 IPR005644 NolW-like AL538_12180 faeafc882f1724108d93538287e87594 84 Pfam PF00037 4Fe-4S binding domain 5 25 5.8E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_12180 faeafc882f1724108d93538287e87594 84 SUPERFAMILY SSF54862 4 72 4.93E-17 T 11-10-2018 AL538_12180 faeafc882f1724108d93538287e87594 84 Gene3D G3DSA:3.30.70.20 2 83 1.6E-33 T 11-10-2018 AL538_12180 faeafc882f1724108d93538287e87594 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Gene3D G3DSA:3.30.450.20 64 167 1.9E-53 T 11-10-2018 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 SMART SM00304 295 349 3.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 SMART SM00283 364 625 1.3E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 SUPERFAMILY SSF103190 64 176 1.33E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 SUPERFAMILY SSF58104 317 626 1.83E-73 T 11-10-2018 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Pfam PF02743 Cache domain 38 258 3.0E-27 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Gene3D G3DSA:3.30.450.20 51 269 1.9E-53 T 11-10-2018 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 590 7.1E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Gene3D G3DSA:1.10.287.950 294 626 2.3E-69 T 11-10-2018 AL538_08205 19e3eda654b79485abb6ee45e589b6d3 626 Pfam PF00672 HAMP domain 296 345 4.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.2E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 Gene3D G3DSA:3.40.50.300 3 326 5.5E-90 T 11-10-2018 AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 SUPERFAMILY SSF52540 5 252 9.49E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 Pfam PF00005 ABC transporter 26 181 8.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 SMART SM00382 34 231 2.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.5E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_06315 d76755c6ce86d3cbaa79c58da1b49925 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 Pfam PF12833 Helix-turn-helix domain 178 255 5.9E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 SUPERFAMILY SSF46689 207 256 2.28E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 SMART SM00342 172 254 6.1E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 8.7E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 8.7E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_26425 469079f9eb0c81aa6a0d1fb4fa672c8c 260 Gene3D G3DSA:1.10.10.60 151 258 2.3E-23 T 11-10-2018 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.7E-52 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 Pfam PF01245 Ribosomal protein L19 3 113 7.1E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.52 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 PIRSF PIRSF002191 1 117 1.1E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 SUPERFAMILY SSF50104 2 115 5.31E-48 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_06540 060c1a0f5db481e58834e5a41da89739 117 Gene3D G3DSA:2.30.30.790 3 117 1.6E-17 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.6E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.6E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06540 060c1a0f5db481e58834e5a41da89739 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.6E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10220 e130f6183c5a15916ce1de9944893b3b 144 SUPERFAMILY SSF69500 2 143 1.96E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AL538_10220 e130f6183c5a15916ce1de9944893b3b 144 Gene3D G3DSA:3.50.80.10 1 144 1.1E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AL538_10220 e130f6183c5a15916ce1de9944893b3b 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.575 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL538_10220 e130f6183c5a15916ce1de9944893b3b 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 1.7E-63 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL538_10220 e130f6183c5a15916ce1de9944893b3b 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 6.1E-51 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.53 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 Gene3D G3DSA:3.30.1330.10 1 143 1.1E-40 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.8E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 SUPERFAMILY SSF55326 3 137 1.57E-32 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 PIRSF PIRSF005303 1 320 3.8E-79 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 Gene3D G3DSA:3.90.650.10 144 320 2.7E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 4.3E-101 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 SUPERFAMILY SSF56042 141 307 1.64E-33 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AL538_12875 e20e8e6d4c9766caee267bdeecdb59ae 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 303 1.8E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 509 9.4E-126 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 Pfam PF05954 Phage late control gene D protein (GPD) 31 336 1.3E-50 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 28 493 4.9E-89 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 SUPERFAMILY SSF69279 19 189 9.35E-42 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 Gene3D G3DSA:3.55.50.10 103 194 4.2E-57 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 SUPERFAMILY SSF69349 436 578 1.02E-26 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 Gene3D G3DSA:2.40.50.230 351 451 4.2E-35 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 Gene3D G3DSA:2.30.110.50 25 337 4.2E-57 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 SUPERFAMILY SSF69255 361 446 5.49E-26 T 11-10-2018 AL538_17005 aafee8cc0626c92292e3f28c0114af8a 660 Gene3D G3DSA:3.30.1920.30 226 292 4.2E-57 T 11-10-2018 AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Gene3D G3DSA:3.30.450.40 12 166 2.4E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Gene3D G3DSA:3.20.20.450 371 628 1.6E-87 T 11-10-2018 IPR035919 EAL domain superfamily AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 359 4.1E-14 T 11-10-2018 IPR000160 GGDEF domain AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SUPERFAMILY SSF141868 377 626 2.62E-83 T 11-10-2018 IPR035919 EAL domain superfamily AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SMART SM00052 372 617 1.0E-94 T 11-10-2018 IPR001633 EAL domain AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SMART SM00065 14 165 9.3E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Gene3D G3DSA:3.30.70.270 189 362 5.4E-20 T 11-10-2018 AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Pfam PF13185 GAF domain 46 143 1.0E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SUPERFAMILY SSF55073 209 363 2.59E-18 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 357 4.3E-15 T 11-10-2018 IPR000160 GGDEF domain AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SMART SM00267 192 362 1.6E-7 T 11-10-2018 IPR000160 GGDEF domain AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 Pfam PF00563 EAL domain 380 612 8.1E-68 T 11-10-2018 IPR001633 EAL domain AL538_24195 dd2d85c0381441352b7c08eb3826769f 636 SUPERFAMILY SSF55781 17 162 2.04E-18 T 11-10-2018 AL538_25205 3c6a86385e0d4458dc0bb3963770dd1a 195 SMART SM01012 133 188 5.6E-19 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AL538_25205 3c6a86385e0d4458dc0bb3963770dd1a 195 Gene3D G3DSA:1.10.10.10 135 194 1.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25205 3c6a86385e0d4458dc0bb3963770dd1a 195 Pfam PF03861 ANTAR domain 136 188 2.4E-17 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 AL538_25205 3c6a86385e0d4458dc0bb3963770dd1a 195 SUPERFAMILY SSF52172 2 188 6.71E-25 T 11-10-2018 IPR011006 CheY-like superfamily AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Gene3D G3DSA:1.10.520.10 26 430 8.8E-218 T 11-10-2018 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Gene3D G3DSA:1.10.520.10 431 726 1.9E-139 T 11-10-2018 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Gene3D G3DSA:1.10.420.10 581 702 1.9E-139 T 11-10-2018 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Hamap MF_01961 Catalase-peroxidase [katG]. 5 726 39.585 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 4.2E-52 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 4.2E-52 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 4.2E-52 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 4.2E-52 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 4.2E-52 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 1.0E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 SUPERFAMILY SSF48113 435 726 2.5E-104 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Pfam PF00141 Peroxidase 66 395 5.1E-50 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Pfam PF00141 Peroxidase 404 701 1.3E-34 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 726 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 SUPERFAMILY SSF48113 17 429 1.77E-152 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AL538_15575 08f6e0e88495f922b09b91ed6f1e5746 726 Gene3D G3DSA:1.10.420.20 189 395 8.8E-218 T 11-10-2018 AL538_27815 68275b241cbcfe288be5a48695027c56 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 1.6E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 SUPERFAMILY SSF47413 1 51 2.44E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 8.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 SMART SM00354 1 74 3.2E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 3.2E-31 T 11-10-2018 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 Gene3D G3DSA:3.40.50.2300 79 319 1.2E-45 T 11-10-2018 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 SUPERFAMILY SSF53822 76 321 1.96E-42 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 Gene3D G3DSA:1.10.260.40 1 60 7.8E-18 T 11-10-2018 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_05910 d2781e0d837ffe1ecabd26027ec66a1a 328 Gene3D G3DSA:3.40.50.2300 159 321 1.2E-45 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 Gene3D G3DSA:3.30.420.40 13 302 9.4E-91 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 SUPERFAMILY SSF109604 312 500 2.83E-48 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 Gene3D G3DSA:1.10.3210.10 310 501 3.2E-59 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 SUPERFAMILY SSF53067 12 131 1.3E-36 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 5.3E-86 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 PIRSF PIRSF001267 2 501 3.3E-201 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 11 305 2.5E-101 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 Gene3D G3DSA:3.30.420.150 116 294 9.4E-91 T 11-10-2018 AL538_12210 ac020198c0487f454667d1ac5a2d6f3e 501 SUPERFAMILY SSF53067 136 308 3.35E-46 T 11-10-2018 AL538_12630 e98653cfc221c52d8e902ca9001dafd6 292 PIRSF PIRSF015558 1 286 8.9E-88 T 11-10-2018 IPR016634 WYL domain protein, s026 type AL538_12630 e98653cfc221c52d8e902ca9001dafd6 292 Pfam PF13280 WYL domain 119 267 9.0E-12 T 11-10-2018 IPR026881 WYL domain AL538_01925 ad10775618865d5bdcde1d0fc9d06318 351 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 23 349 30.686 T 11-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 AL538_01925 ad10775618865d5bdcde1d0fc9d06318 351 SUPERFAMILY SSF81345 27 346 4.58E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_01925 ad10775618865d5bdcde1d0fc9d06318 351 Gene3D G3DSA:1.10.3470.10 25 348 3.8E-93 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_01925 ad10775618865d5bdcde1d0fc9d06318 351 Pfam PF01032 FecCD transport family 45 346 3.3E-80 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_26040 b0818be03cc5e0581df589ac9236f50e 349 Gene3D G3DSA:1.10.10.800 175 272 1.8E-78 T 11-10-2018 AL538_26040 b0818be03cc5e0581df589ac9236f50e 349 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 46 236 7.7E-13 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AL538_26040 b0818be03cc5e0581df589ac9236f50e 349 SUPERFAMILY SSF53474 38 339 2.03E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_26040 b0818be03cc5e0581df589ac9236f50e 349 Gene3D G3DSA:3.40.50.1820 44 330 1.8E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 11-10-2018 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 SUPERFAMILY SSF50692 689 828 2.94E-42 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 11-10-2018 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.519 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 2.4E-88 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 3.7E-27 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Gene3D G3DSA:2.40.40.20 705 828 1.1E-45 T 11-10-2018 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 11-10-2018 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 SUPERFAMILY SSF53706 38 661 1.83E-200 T 11-10-2018 AL538_22670 acf745c25674a3d58c33e67802dbf0d6 829 SMART SM00926 41 95 1.9E-13 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 Gene3D G3DSA:3.30.420.40 3 315 4.0E-131 T 11-10-2018 AL538_11390 b0578983fcd276773232fefb36e7463f 338 SUPERFAMILY SSF53067 101 309 4.96E-43 T 11-10-2018 AL538_11390 b0578983fcd276773232fefb36e7463f 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 2.7E-123 T 11-10-2018 IPR017861 Kae1/TsaD family AL538_11390 b0578983fcd276773232fefb36e7463f 338 Gene3D G3DSA:3.30.420.40 129 293 4.0E-131 T 11-10-2018 AL538_11390 b0578983fcd276773232fefb36e7463f 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 AL538_11390 b0578983fcd276773232fefb36e7463f 338 Pfam PF00814 Glycoprotease family 24 307 3.8E-103 T 11-10-2018 IPR000905 Gcp-like domain AL538_11390 b0578983fcd276773232fefb36e7463f 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.684 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AL538_11390 b0578983fcd276773232fefb36e7463f 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 8.2E-134 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AL538_11390 b0578983fcd276773232fefb36e7463f 338 SUPERFAMILY SSF53067 3 123 6.47E-31 T 11-10-2018 AL538_03010 7fdecc53d4a59e93d5b9e09c2f67600e 155 Gene3D G3DSA:3.40.630.30 2 154 2.4E-16 T 11-10-2018 AL538_03010 7fdecc53d4a59e93d5b9e09c2f67600e 155 SUPERFAMILY SSF55729 1 137 9.22E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_03010 7fdecc53d4a59e93d5b9e09c2f67600e 155 Pfam PF00583 Acetyltransferase (GNAT) family 28 133 4.2E-8 T 11-10-2018 IPR000182 GNAT domain AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Gene3D G3DSA:3.90.199.10 34 483 2.9E-180 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.943 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 11-10-2018 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Gene3D G3DSA:2.120.10.90 502 740 1.0E-15 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 SUPERFAMILY SSF101904 499 743 6.54E-53 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Gene3D G3DSA:1.10.268.10 371 456 2.9E-180 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 SUPERFAMILY SSF56719 33 485 3.4E-156 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 636 0.059 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 6.0E-136 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 Gene3D G3DSA:3.30.1360.40 240 333 2.9E-180 T 11-10-2018 AL538_11505 74773ed0caf6615a5819f6627a2cd762 762 SMART SM00434 13 463 6.7E-234 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_03095 7c21d089b48940bf0711c51b13f40f8e 158 Pfam PF01047 MarR family 31 89 7.4E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_03095 7c21d089b48940bf0711c51b13f40f8e 158 Gene3D G3DSA:1.10.10.10 1 140 3.0E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03095 7c21d089b48940bf0711c51b13f40f8e 158 SMART SM00347 24 124 4.2E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_03095 7c21d089b48940bf0711c51b13f40f8e 158 SUPERFAMILY SSF46785 4 141 1.44E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 Pfam PF03466 LysR substrate binding domain 89 287 4.6E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 SUPERFAMILY SSF46785 5 86 5.1E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 SUPERFAMILY SSF53850 89 291 1.39E-23 T 11-10-2018 AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 Gene3D G3DSA:1.10.10.10 1 89 8.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09560 dc556e1da3c9ccd61a75698f32b94209 300 Gene3D G3DSA:3.40.190.290 93 277 1.1E-11 T 11-10-2018 AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Gene3D G3DSA:3.30.70.1450 229 288 1.8E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_16275 1b9b0fca5f243179685b99c117688ead 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_16275 1b9b0fca5f243179685b99c117688ead 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.1E-37 T 11-10-2018 IPR006512 YidE/YbjL duplication AL538_16275 1b9b0fca5f243179685b99c117688ead 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 171 2.1E-27 T 11-10-2018 IPR006512 YidE/YbjL duplication AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 8.3E-43 T 11-10-2018 IPR006512 YidE/YbjL duplication AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 3.0E-36 T 11-10-2018 IPR006512 YidE/YbjL duplication AL538_16275 1b9b0fca5f243179685b99c117688ead 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 57.876 T 11-10-2018 IPR023017 Transport protein YbjL, putative AL538_16275 1b9b0fca5f243179685b99c117688ead 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_01920 a4c6fbfb7e384d32348098b85132b8f6 255 Pfam PF00005 ABC transporter 15 168 4.4E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_01920 a4c6fbfb7e384d32348098b85132b8f6 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 44.551 T 11-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 AL538_01920 a4c6fbfb7e384d32348098b85132b8f6 255 SMART SM00382 22 217 4.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_01920 a4c6fbfb7e384d32348098b85132b8f6 255 Gene3D G3DSA:3.40.50.300 9 254 3.3E-52 T 11-10-2018 AL538_01920 a4c6fbfb7e384d32348098b85132b8f6 255 SUPERFAMILY SSF52540 16 231 2.54E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 SMART SM00072 3 187 1.4E-75 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 Gene3D G3DSA:3.30.63.10 37 96 5.2E-74 T 11-10-2018 AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.115 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 Pfam PF00625 Guanylate kinase 5 185 7.4E-62 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 5.8E-76 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 SUPERFAMILY SSF52540 3 189 2.13E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10395 d2266440d31ce76ea906dec5ec4797a9 207 Gene3D G3DSA:3.40.50.300 8 183 5.2E-74 T 11-10-2018 AL538_04080 096d458656afde184ec6cc274e507608 306 Gene3D G3DSA:1.10.3720.10 85 301 8.7E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04080 096d458656afde184ec6cc274e507608 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 8.1E-42 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_04080 096d458656afde184ec6cc274e507608 306 SUPERFAMILY SSF161098 89 291 5.23E-21 T 11-10-2018 IPR035906 MetI-like superfamily AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 SMART SM00963 113 193 2.2E-27 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 382 395 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 SMART SM00962 208 409 2.1E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 Gene3D G3DSA:1.20.120.140 110 407 1.1E-117 T 11-10-2018 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 SMART SM00382 207 399 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 SUPERFAMILY SSF52540 206 409 4.12E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 SUPERFAMILY SSF47364 108 187 1.31E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 136 408 1.1E-115 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 136 409 65.219 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 Gene3D G3DSA:3.40.50.300 205 397 1.1E-117 T 11-10-2018 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 Pfam PF02881 SRP54-type protein, helical bundle domain 128 189 1.3E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_08995 32a77272eacc99fb7677adf6fdf126e6 412 Pfam PF00448 SRP54-type protein, GTPase domain 209 408 1.3E-77 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Pfam PF00684 DnaJ central domain 145 205 3.3E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Gene3D G3DSA:1.10.287.110 1 111 8.1E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 SUPERFAMILY SSF57938 132 208 2.75E-23 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.87 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 PRINTS PR00625 DnaJ domain signature 7 25 6.4E-33 T 11-10-2018 IPR001623 DnaJ domain AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 PRINTS PR00625 DnaJ domain signature 62 81 6.4E-33 T 11-10-2018 IPR001623 DnaJ domain AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 PRINTS PR00625 DnaJ domain signature 25 40 6.4E-33 T 11-10-2018 IPR001623 DnaJ domain AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 PRINTS PR00625 DnaJ domain signature 42 62 6.4E-33 T 11-10-2018 IPR001623 DnaJ domain AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Pfam PF00226 DnaJ domain 5 67 6.4E-28 T 11-10-2018 IPR001623 DnaJ domain AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Gene3D G3DSA:2.60.260.20 253 360 9.0E-29 T 11-10-2018 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 SUPERFAMILY SSF49493 112 259 1.96E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Gene3D G3DSA:2.10.230.10 134 207 1.6E-25 T 11-10-2018 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 SUPERFAMILY SSF49493 257 342 7.19E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 SUPERFAMILY SSF46565 1 107 8.77E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 Pfam PF01556 DnaJ C terminal domain 119 331 1.9E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.3E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AL538_12735 13a804d6cc8d5ce81d9bbcb22ae39a25 377 SMART SM00271 4 62 3.0E-32 T 11-10-2018 IPR001623 DnaJ domain AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 PIRSF PIRSF000414 1 535 6.9E-229 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Gene3D G3DSA:3.40.140.20 224 380 2.8E-58 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 SMART SM00851 19 132 1.9E-61 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 535 3.3E-260 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Gene3D G3DSA:3.40.140.20 399 535 5.9E-60 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 466 3.1E-119 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 SMART SM00798 137 467 2.8E-219 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 SUPERFAMILY SSF53927 227 535 1.3E-130 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 535 45.918 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Gene3D G3DSA:3.40.50.1380 1 200 2.2E-87 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 Pfam PF02142 MGS-like domain 19 132 4.6E-31 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_08585 1ba728b9291db3a259eccf883d582cd8 535 SUPERFAMILY SSF52335 7 197 8.77E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 Gene3D G3DSA:3.40.1690.10 218 359 1.8E-57 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 SUPERFAMILY SSF160544 250 355 8.24E-40 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.3E-121 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 7.1E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 7.1E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 7.1E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 7.1E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 7.1E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_05045 fbe56366ccbbda7ecaa1a9d90b6cd160 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 4.9E-134 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 SUPERFAMILY SSF53850 88 295 1.76E-37 T 11-10-2018 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 SUPERFAMILY SSF46785 3 84 6.27E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 Gene3D G3DSA:3.40.190.10 88 292 1.5E-46 T 11-10-2018 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 Gene3D G3DSA:3.40.190.10 168 267 1.5E-46 T 11-10-2018 AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 Pfam PF03466 LysR substrate binding domain 93 296 2.1E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 Gene3D G3DSA:1.10.10.10 1 86 5.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22515 6fbc399eb638b7f806d6876d23f9f7d2 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 SUPERFAMILY SSF103088 184 310 3.14E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 SUPERFAMILY SSF56925 18 171 4.97E-29 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 292 9.9E-5 T 11-10-2018 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 255 272 9.9E-5 T 11-10-2018 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 293 313 9.9E-5 T 11-10-2018 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 Gene3D G3DSA:2.40.160.20 5 185 2.8E-38 T 11-10-2018 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 Gene3D G3DSA:3.30.1330.60 186 312 1.5E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01021 OMPA domain signature 255 271 3.4E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01021 OMPA domain signature 210 232 3.4E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 PRINTS PR01021 OMPA domain signature 240 255 3.4E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 Pfam PF01389 OmpA-like transmembrane domain 19 171 7.8E-32 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL538_13370 8a7295cd0fc3b600b0fbc829c7ab3d9b 319 Pfam PF00691 OmpA family 210 304 2.9E-23 T 11-10-2018 IPR006665 OmpA-like domain AL538_11445 62cdf135a78016e6e2c9ec8774810aeb 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 8.0E-66 T 11-10-2018 IPR002727 Protein of unknown function DUF47 AL538_11445 62cdf135a78016e6e2c9ec8774810aeb 228 SUPERFAMILY SSF109755 31 218 2.62E-15 T 11-10-2018 AL538_11445 62cdf135a78016e6e2c9ec8774810aeb 228 Pfam PF01865 Protein of unknown function DUF47 9 225 3.2E-64 T 11-10-2018 IPR018445 Putative phosphate transport regulator AL538_11445 62cdf135a78016e6e2c9ec8774810aeb 228 Gene3D G3DSA:1.20.58.220 2 227 9.8E-65 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 SUPERFAMILY SSF51569 4 424 4.76E-165 T 11-10-2018 AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 Gene3D G3DSA:3.20.20.70 8 416 6.8E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 Gene3D G3DSA:1.10.400.20 288 411 6.8E-174 T 11-10-2018 AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 PIRSF PIRSF009264 1 430 1.4E-193 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 2.3E-193 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL538_18965 5a1e58d9129177dbe17169b0f0cccffb 436 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 6.7E-201 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 7.7E-36 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Gene3D G3DSA:1.10.287.90 25 119 1.5E-25 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 SUPERFAMILY SSF46626 225 367 5.87E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 SUPERFAMILY SSF49503 121 260 4.81E-53 T 11-10-2018 IPR008972 Cupredoxin AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 SUPERFAMILY SSF81464 15 117 2.94E-28 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 2.7E-40 T 11-10-2018 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Gene3D G3DSA:2.60.40.420 120 259 2.3E-53 T 11-10-2018 IPR008972 Cupredoxin AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Gene3D G3DSA:1.10.760.10 263 387 3.7E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 38 255 3.8E-61 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 28 108 3.0E-16 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26210 2ad7fdf771fd7c1fb1f9a1b8879f9334 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 356 8.5E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_14795 7efb57c904d44b9de707c908705bced8 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 2.6E-152 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_14795 7efb57c904d44b9de707c908705bced8 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_14795 7efb57c904d44b9de707c908705bced8 405 Gene3D G3DSA:3.90.550.10 2 286 2.6E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14795 7efb57c904d44b9de707c908705bced8 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.094 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_14795 7efb57c904d44b9de707c908705bced8 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_14795 7efb57c904d44b9de707c908705bced8 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 AL538_14795 7efb57c904d44b9de707c908705bced8 405 Gene3D G3DSA:2.160.10.10 287 403 3.6E-32 T 11-10-2018 AL538_14795 7efb57c904d44b9de707c908705bced8 405 SUPERFAMILY SSF53448 4 358 1.48E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14795 7efb57c904d44b9de707c908705bced8 405 Pfam PF00483 Nucleotidyl transferase 6 273 7.2E-63 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL538_14795 7efb57c904d44b9de707c908705bced8 405 SUPERFAMILY SSF51161 292 403 9.42E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 Gene3D G3DSA:3.40.640.10 89 348 7.5E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 PIRSF PIRSF000521 7 158 2.3E-6 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 PIRSF PIRSF000521 150 452 8.6E-21 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 Gene3D G3DSA:3.90.1150.10 61 444 7.5E-118 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 SUPERFAMILY SSF53383 57 450 1.65E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_20890 e1ee574ade189cdafd7670b6fbd5463c 459 Pfam PF00202 Aminotransferase class-III 57 449 5.4E-85 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_19450 acc9c39576e1c07c81fe7e1473db08d1 492 Pfam PF14559 Tetratricopeptide repeat 122 183 4.6E-6 T 11-10-2018 AL538_19450 acc9c39576e1c07c81fe7e1473db08d1 492 SUPERFAMILY SSF48452 107 176 2.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_19450 acc9c39576e1c07c81fe7e1473db08d1 492 Gene3D G3DSA:1.25.40.10 52 204 2.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_19450 acc9c39576e1c07c81fe7e1473db08d1 492 Pfam PF04575 Protein of unknown function (DUF560) 200 492 2.6E-54 T 11-10-2018 IPR007655 Protein of unknown function DUF560 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 SUPERFAMILY SSF56176 4 268 4.49E-68 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Pfam PF01565 FAD binding domain 41 178 4.4E-10 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Gene3D G3DSA:3.30.1370.20 431 515 4.2E-39 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 PIRSF PIRSF000101 1 566 3.7E-297 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Gene3D G3DSA:3.30.43.10 1 96 5.5E-13 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Gene3D G3DSA:3.30.70.610 368 430 4.5E-18 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Gene3D G3DSA:3.30.70.610 264 345 3.5E-17 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 561 1.9E-136 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Gene3D G3DSA:3.30.465.10 100 263 1.1E-70 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 SUPERFAMILY SSF55103 271 561 1.53E-105 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL538_24715 518e1235b48551eb2e18beb4f4bc73d1 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 54.797 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 SUPERFAMILY SSF47413 3 60 2.42E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.3E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.3E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 Gene3D G3DSA:3.40.50.2300 161 323 9.7E-67 T 11-10-2018 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 SUPERFAMILY SSF53822 62 330 9.24E-51 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 Gene3D G3DSA:3.40.50.2300 78 319 9.7E-67 T 11-10-2018 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.8E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 SMART SM00354 2 72 4.7E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 Gene3D G3DSA:1.10.260.40 2 60 2.8E-23 T 11-10-2018 AL538_16225 694995f1ef2f88e3f3a4052d4197cfdc 353 Pfam PF13377 Periplasmic binding protein-like domain 171 328 6.7E-34 T 11-10-2018 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 Gene3D G3DSA:3.20.20.80 51 453 2.4E-72 T 11-10-2018 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 SMART SM00642 61 447 2.3E-34 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 Gene3D G3DSA:2.60.40.1180 454 538 3.0E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 SUPERFAMILY SSF51011 464 532 2.72E-6 T 11-10-2018 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 Pfam PF00128 Alpha amylase, catalytic domain 205 390 1.1E-14 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 Pfam PF00128 Alpha amylase, catalytic domain 87 174 1.2E-26 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_20175 cc25f62e6e5d4f0ca02501844280cca1 540 SUPERFAMILY SSF51445 55 457 3.02E-69 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 SMART SM00448 11 129 5.6E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 Gene3D G3DSA:1.25.40.10 194 291 9.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 SUPERFAMILY SSF52172 9 166 5.27E-18 T 11-10-2018 IPR011006 CheY-like superfamily AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 Pfam PF00072 Response regulator receiver domain 13 128 5.0E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 Gene3D G3DSA:3.40.50.2300 5 144 1.5E-17 T 11-10-2018 AL538_24950 d0cad1d1aa91abaebcfefd0bdb14af3d 514 SUPERFAMILY SSF48452 199 285 9.68E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_09400 bca3fd42f731064633dbae8f4be1d77b 184 SUPERFAMILY SSF51161 4 175 1.18E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_09400 bca3fd42f731064633dbae8f4be1d77b 184 Gene3D G3DSA:2.160.10.10 2 183 2.0E-54 T 11-10-2018 AL538_09400 bca3fd42f731064633dbae8f4be1d77b 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 3.5E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 6.4E-85 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 SUPERFAMILY SSF46548 105 233 4.88E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.9E-29 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 SUPERFAMILY SSF54292 1 104 6.63E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 Gene3D G3DSA:1.10.1060.10 105 236 1.1E-55 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 Gene3D G3DSA:3.10.20.30 1 104 2.2E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_13755 c8b7a907d12fec127a9887c92bc1bd25 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 11-10-2018 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 Gene3D G3DSA:3.20.20.80 259 636 2.5E-136 T 11-10-2018 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 1.4E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 SUPERFAMILY SSF55545 128 259 2.24E-23 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 Gene3D G3DSA:3.30.379.10 131 258 3.1E-21 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 SUPERFAMILY SSF51445 260 620 1.54E-128 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 248 1.1E-15 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal AL538_06335 938aca22b48b8b733b22c4f3d2d52af7 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 2.9E-118 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 PRINTS PR00207 Flagellin signature 111 134 1.4E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 PRINTS PR00207 Flagellin signature 76 95 1.4E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 PRINTS PR00207 Flagellin signature 37 54 1.4E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 Gene3D G3DSA:1.20.1330.10 50 234 1.3E-52 T 11-10-2018 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 203 282 2.7E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 SUPERFAMILY SSF64518 1 283 1.96E-80 T 11-10-2018 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 Gene3D G3DSA:1.10.8.410 235 283 1.4E-19 T 11-10-2018 AL538_21325 c527fcc769a49129f30b1dd89021e4c9 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 3.0E-45 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_12555 e219ca017ff0b9f7b311283e3a9824a9 680 Pfam PF13515 Fusaric acid resistance protein-like 376 496 1.7E-16 T 11-10-2018 AL538_12555 e219ca017ff0b9f7b311283e3a9824a9 680 Pfam PF12805 FUSC-like inner membrane protein yccS 71 329 1.4E-18 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal AL538_13810 aaf5a44125fa7b038ccc5aa2253a1592 76 SUPERFAMILY SSF46785 1 55 9.98E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13810 aaf5a44125fa7b038ccc5aa2253a1592 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 2.5E-13 T 11-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AL538_13810 aaf5a44125fa7b038ccc5aa2253a1592 76 Gene3D G3DSA:1.10.10.10 1 72 3.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 Pfam PF00230 Major intrinsic protein 2 222 2.8E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 Gene3D G3DSA:1.20.1080.10 1 228 2.6E-85 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.093 T 11-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 SUPERFAMILY SSF81338 2 227 5.76E-68 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_04765 712f7f529728ed4c2c40e61b91c85026 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 6.3E-61 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 1.3E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 SUPERFAMILY SSF52540 75 356 1.27E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 Gene3D G3DSA:3.40.50.300 1 220 8.8E-74 T 11-10-2018 AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 Gene3D G3DSA:3.40.50.300 221 424 2.0E-48 T 11-10-2018 AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 SMART SM00490 258 339 1.3E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 SMART SM00487 20 229 1.4E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_25630 eb88efe25c05fa66ba27d3f7502f7651 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.3E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:3.90.105.10 212 360 1.7E-133 T 11-10-2018 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:2.20.25.120 53 85 8.7E-56 T 11-10-2018 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 SUPERFAMILY SSF63882 192 362 4.32E-46 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 SUPERFAMILY SSF63867 512 590 2.49E-23 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 8.7E-48 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-31 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 SUPERFAMILY SSF52540 7 169 3.02E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:2.40.340.10 513 583 1.7E-133 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:3.40.50.300 10 165 8.7E-56 T 11-10-2018 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 7.1E-21 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:3.40.980.10 211 512 1.7E-133 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 PIRSF PIRSF036618 1 592 0.0 T 11-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Gene3D G3DSA:2.170.190.11 236 327 1.7E-133 T 11-10-2018 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 3.9E-42 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.9E-25 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 SMART SM00852 366 503 1.7E-39 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 SUPERFAMILY SSF53218 363 508 2.22E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_00580 c6902b90043467587c71a2c1f7ea4592 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 194 353 5.2E-37 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_28025 9030f94342cc88c1f6debcccb2e78a80 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.8E-7 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_28025 9030f94342cc88c1f6debcccb2e78a80 41 Pfam PF00444 Ribosomal protein L36 1 40 5.4E-16 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_28025 9030f94342cc88c1f6debcccb2e78a80 41 SUPERFAMILY SSF57840 1 40 2.09E-13 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_28025 9030f94342cc88c1f6debcccb2e78a80 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.072 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_28025 9030f94342cc88c1f6debcccb2e78a80 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Pfam PF02938 GAD domain 307 406 2.3E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Gene3D G3DSA:3.30.1360.30 271 420 2.1E-195 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 9.5E-265 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 SUPERFAMILY SSF55681 108 582 3.64E-100 T 11-10-2018 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.7E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 SUPERFAMILY SSF55261 288 419 1.03E-46 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 3.5E-104 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 SUPERFAMILY SSF50249 1 105 3.24E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Gene3D G3DSA:2.40.50.140 1 106 2.7E-34 T 11-10-2018 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.176 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 Gene3D G3DSA:3.30.930.10 118 578 2.1E-195 T 11-10-2018 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_14895 2aeb17d1b187c8fa582209f8f31f0544 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_09330 7f8eeb53086f00d0ab581f46567fb875 84 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 21 84 2.7E-16 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AL538_09330 7f8eeb53086f00d0ab581f46567fb875 84 Pfam PF02597 ThiS family 25 84 1.3E-12 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AL538_09330 7f8eeb53086f00d0ab581f46567fb875 84 Gene3D G3DSA:3.10.20.30 19 84 2.3E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_09330 7f8eeb53086f00d0ab581f46567fb875 84 SUPERFAMILY SSF54285 19 84 1.37E-14 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.5E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.5E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 SUPERFAMILY SSF100950 74 234 1.09E-32 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 SMART SM00420 6 58 2.2E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.4E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.2E-54 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 SUPERFAMILY SSF46785 5 69 1.3E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18970 d674a98deb416f2e1dae42d0127412c4 258 SMART SM01134 73 234 3.4E-71 T 11-10-2018 AL538_16860 366a664008cfa515209b30c22ffb1d27 256 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 16 246 9.7E-45 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_16860 366a664008cfa515209b30c22ffb1d27 256 Gene3D G3DSA:1.10.287.470 67 132 3.0E-38 T 11-10-2018 AL538_16860 366a664008cfa515209b30c22ffb1d27 256 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 244 8.0E-22 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_16860 366a664008cfa515209b30c22ffb1d27 256 Gene3D G3DSA:2.40.50.100 32 174 3.0E-38 T 11-10-2018 AL538_16860 366a664008cfa515209b30c22ffb1d27 256 SUPERFAMILY SSF111369 25 246 1.7E-23 T 11-10-2018 AL538_16860 366a664008cfa515209b30c22ffb1d27 256 Gene3D G3DSA:2.40.30.170 175 244 3.0E-38 T 11-10-2018 AL538_22990 b77b6bcd36020abcacc134e9650153e8 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 5.0E-8 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL538_22990 b77b6bcd36020abcacc134e9650153e8 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.7E-31 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AL538_20665 be0adf9de4c029277de43e27f0a3cdaf 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 6.8E-72 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_20665 be0adf9de4c029277de43e27f0a3cdaf 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 3.9E-208 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AL538_06460 72dfd7ca32b237f5521c3994628f28b9 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.8E-74 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 AL538_06460 72dfd7ca32b237f5521c3994628f28b9 176 SUPERFAMILY SSF53271 3 175 2.62E-56 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_06460 72dfd7ca32b237f5521c3994628f28b9 176 Gene3D G3DSA:3.40.50.2020 1 176 3.7E-67 T 11-10-2018 AL538_06460 72dfd7ca32b237f5521c3994628f28b9 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 4.9E-26 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL538_19415 66676e21a5980b0f5327f535b7cfe6e2 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.7E-140 T 11-10-2018 IPR021781 Protein of unknown function DUF3346 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 SUPERFAMILY SSF58104 248 557 4.84E-75 T 11-10-2018 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 SMART SM01049 44 133 1.0E-29 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 Pfam PF17200 Single Cache domain 2 47 189 1.4E-36 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 Gene3D G3DSA:1.10.287.950 228 557 3.1E-71 T 11-10-2018 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 Gene3D G3DSA:3.30.450.20 38 183 6.5E-53 T 11-10-2018 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 SMART SM00283 295 556 3.9E-61 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 SMART SM00304 226 280 4.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 523 9.7E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_10515 e68496c6fe0336c51e078ca2b56a3a24 557 Pfam PF00672 HAMP domain 230 276 5.4E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 9.3E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SUPERFAMILY SSF52540 440 747 6.85E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 11-10-2018 IPR004176 Clp, N-terminal AL538_14755 778c276823ecab44e84f70f3d62dc740 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Gene3D G3DSA:1.10.1780.10 1 143 1.5E-42 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SUPERFAMILY SSF81923 1 142 8.24E-59 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Gene3D G3DSA:1.10.8.60 656 755 9.1E-31 T 11-10-2018 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SMART SM00382 209 354 4.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SMART SM00382 490 657 5.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 2.0E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SUPERFAMILY SSF52540 171 429 1.28E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14755 778c276823ecab44e84f70f3d62dc740 756 SMART SM01086 656 745 5.3E-36 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_14755 778c276823ecab44e84f70f3d62dc740 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Gene3D G3DSA:1.10.8.60 354 441 2.1E-34 T 11-10-2018 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Gene3D G3DSA:3.40.50.300 160 353 2.1E-62 T 11-10-2018 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Gene3D G3DSA:3.40.50.300 442 655 3.7E-76 T 11-10-2018 AL538_14755 778c276823ecab44e84f70f3d62dc740 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 2.1E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_14885 4681626fd076b942265251a2d66c5dbf 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.293 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL538_14885 4681626fd076b942265251a2d66c5dbf 245 Gene3D G3DSA:3.40.50.150 21 245 1.1E-64 T 11-10-2018 AL538_14885 4681626fd076b942265251a2d66c5dbf 245 PIRSF PIRSF006325 4 245 8.5E-125 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL538_14885 4681626fd076b942265251a2d66c5dbf 245 Pfam PF13649 Methyltransferase domain 63 161 1.1E-13 T 11-10-2018 AL538_14885 4681626fd076b942265251a2d66c5dbf 245 SUPERFAMILY SSF53335 23 245 4.34E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_14885 4681626fd076b942265251a2d66c5dbf 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 9.1E-118 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 1.6E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 1.6E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 349 512 1.6E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 Pfam PF00672 HAMP domain 219 266 4.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 SMART SM00304 218 270 1.6E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 Gene3D G3DSA:1.10.287.950 217 547 2.5E-70 T 11-10-2018 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 SUPERFAMILY SSF58104 239 547 4.71E-70 T 11-10-2018 AL538_17290 654a7aafbe1ef51a27bead9ff68c3622 547 SMART SM00283 285 546 1.9E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_11325 87949886826969be3f263cec353df41e 214 SUPERFAMILY SSF56784 1 212 2.94E-46 T 11-10-2018 IPR036412 HAD-like superfamily AL538_11325 87949886826969be3f263cec353df41e 214 Gene3D G3DSA:3.40.50.1000 5 200 2.6E-49 T 11-10-2018 IPR023214 HAD superfamily AL538_11325 87949886826969be3f263cec353df41e 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 184 1.5E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11325 87949886826969be3f263cec353df41e 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 7.0E-32 T 11-10-2018 AL538_11325 87949886826969be3f263cec353df41e 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11325 87949886826969be3f263cec353df41e 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11325 87949886826969be3f263cec353df41e 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11325 87949886826969be3f263cec353df41e 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.4E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11325 87949886826969be3f263cec353df41e 214 Gene3D G3DSA:1.10.150.240 16 84 2.6E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Gene3D G3DSA:1.10.8.60 359 424 9.1E-20 T 11-10-2018 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 SUPERFAMILY SSF55781 7 167 1.09E-17 T 11-10-2018 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 SMART SM00065 20 168 2.7E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 SUPERFAMILY SSF46689 461 509 6.72E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Pfam PF00158 Sigma-54 interaction domain 188 354 1.3E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 SUPERFAMILY SSF52540 187 423 4.48E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 SMART SM00382 208 351 3.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Gene3D G3DSA:1.10.10.60 458 510 3.7E-9 T 11-10-2018 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Pfam PF01590 GAF domain 24 154 2.3E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Gene3D G3DSA:3.40.50.300 175 358 1.2E-62 T 11-10-2018 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_21955 a285ec66d18aa377fb0e2a7844243069 510 Gene3D G3DSA:3.30.450.40 4 172 4.2E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_07100 57a912760aa9aa03317913ca89628c86 541 Gene3D G3DSA:3.30.450.20 34 182 2.6E-30 T 11-10-2018 AL538_07100 57a912760aa9aa03317913ca89628c86 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 502 3.0E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_07100 57a912760aa9aa03317913ca89628c86 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.0E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_07100 57a912760aa9aa03317913ca89628c86 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.0E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_07100 57a912760aa9aa03317913ca89628c86 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 2.0E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_07100 57a912760aa9aa03317913ca89628c86 541 Gene3D G3DSA:1.10.287.950 218 540 8.7E-66 T 11-10-2018 AL538_07100 57a912760aa9aa03317913ca89628c86 541 SMART SM00283 277 538 8.7E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_07100 57a912760aa9aa03317913ca89628c86 541 SMART SM01049 30 124 2.3E-20 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_07100 57a912760aa9aa03317913ca89628c86 541 SUPERFAMILY SSF58104 250 539 9.81E-70 T 11-10-2018 AL538_07100 57a912760aa9aa03317913ca89628c86 541 Pfam PF17200 Single Cache domain 2 36 185 2.2E-33 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 Pfam PF00034 Cytochrome c 195 304 7.8E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 PIRSF PIRSF000294 12 328 9.7E-125 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 Gene3D G3DSA:1.10.760.10 37 310 1.9E-112 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 6.5E-49 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 SUPERFAMILY SSF46626 26 174 6.28E-48 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 SUPERFAMILY SSF46626 173 323 5.17E-41 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01375 535fa21e838581af1a9cdaeddcc3ffad 328 Gene3D G3DSA:1.10.760.10 39 186 1.9E-112 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_21490 7e107dfac9158fa609ec622f55e0387d 321 Gene3D G3DSA:3.40.190.10 34 177 9.1E-21 T 11-10-2018 AL538_21490 7e107dfac9158fa609ec622f55e0387d 321 Gene3D G3DSA:3.40.190.10 207 305 2.9E-11 T 11-10-2018 AL538_21490 7e107dfac9158fa609ec622f55e0387d 321 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 62 302 1.5E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_21490 7e107dfac9158fa609ec622f55e0387d 321 SMART SM00062 49 305 4.4E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_21490 7e107dfac9158fa609ec622f55e0387d 321 SUPERFAMILY SSF53850 21 303 9.78E-39 T 11-10-2018 AL538_12495 aa407443124db259cfefa675407aa893 422 PIRSF PIRSF001434 1 422 2.9E-127 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_12495 aa407443124db259cfefa675407aa893 422 SUPERFAMILY SSF53383 1 421 1.99E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_12495 aa407443124db259cfefa675407aa893 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_12495 aa407443124db259cfefa675407aa893 422 Gene3D G3DSA:3.40.640.10 1 285 7.7E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_12495 aa407443124db259cfefa675407aa893 422 Gene3D G3DSA:3.90.1150.10 289 422 1.2E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_12495 aa407443124db259cfefa675407aa893 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 4.5E-200 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AL538_12495 aa407443124db259cfefa675407aa893 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 2.4E-141 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.6E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 2.3E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.5E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 SUPERFAMILY SSF56645 1 240 1.44E-81 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Gene3D G3DSA:1.10.540.10 1 118 1.0E-36 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 SUPERFAMILY SSF47203 225 378 4.03E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Gene3D G3DSA:1.20.140.10 233 383 2.2E-54 T 11-10-2018 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 Gene3D G3DSA:2.40.110.10 121 232 1.4E-41 T 11-10-2018 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 PIRSF PIRSF016578 4 193 4.8E-12 T 11-10-2018 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 PIRSF PIRSF016578 207 382 2.5E-13 T 11-10-2018 AL538_23675 1999a6b0596caf726a8740fb53c9f84d 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 Gene3D G3DSA:3.30.70.20 217 276 1.9E-7 T 11-10-2018 AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 SUPERFAMILY SSF54862 96 277 4.69E-19 T 11-10-2018 AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 Pfam PF12801 4Fe-4S binding domain 82 127 4.8E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 Pfam PF12801 4Fe-4S binding domain 174 209 3.0E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17415 46eec2d11c8902224ba73ec7c480d58a 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 9.4E-111 T 11-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.2E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.2E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.2E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.3E-115 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 SUPERFAMILY SSF51735 2 245 7.96E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 7.6E-58 T 11-10-2018 AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 Gene3D G3DSA:3.40.50.720 1 245 3.7E-75 T 11-10-2018 AL538_22635 9be9a1c9a7298d986cb83394c0b980db 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0035 T 11-10-2018 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 Gene3D G3DSA:3.40.50.2300 7 146 1.2E-34 T 11-10-2018 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 SMART SM00421 154 211 8.7E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 SUPERFAMILY SSF46894 146 213 1.73E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_17220 14320c18147a2a0247103ddcdde5e940 222 Gene3D G3DSA:1.10.10.10 149 215 1.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07990 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_07990 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_07990 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_07990 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL538_07990 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AL538_07990 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site AL538_07990 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_07990 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_07990 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_07990 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AL538_07990 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_07990 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07990 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14740 c66ddbc935e243dfcf143c41664a2ca9 741 PIRSF PIRSF009407 1 741 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL538_14740 c66ddbc935e243dfcf143c41664a2ca9 741 Gene3D G3DSA:3.40.718.10 410 655 1.8E-9 T 11-10-2018 AL538_14740 c66ddbc935e243dfcf143c41664a2ca9 741 SUPERFAMILY SSF53659 5 740 0.0 T 11-10-2018 AL538_14740 c66ddbc935e243dfcf143c41664a2ca9 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL538_14740 c66ddbc935e243dfcf143c41664a2ca9 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AL538_17110 0a386e919c2342fcf0fa1473b711eabd 129 Gene3D G3DSA:3.40.50.300 4 129 4.5E-27 T 11-10-2018 AL538_17110 0a386e919c2342fcf0fa1473b711eabd 129 SUPERFAMILY SSF52540 5 103 2.37E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17110 0a386e919c2342fcf0fa1473b711eabd 129 Pfam PF13671 AAA domain 6 106 4.2E-14 T 11-10-2018 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 SUPERFAMILY SSF52313 6 232 8.11E-96 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.949 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.1E-107 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 Gene3D G3DSA:1.10.287.610 103 150 7.6E-92 T 11-10-2018 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 Gene3D G3DSA:3.40.50.10490 8 219 7.6E-92 T 11-10-2018 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05475 4a833ac850c267ae9ff32a0baa690e18 242 Pfam PF00318 Ribosomal protein S2 9 224 1.2E-93 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_02545 cb7e98c69f6b68b69c1206ba90472f10 159 SUPERFAMILY SSF52540 2 115 1.61E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_02545 cb7e98c69f6b68b69c1206ba90472f10 159 Gene3D G3DSA:3.40.50.300 1 154 1.1E-14 T 11-10-2018 AL538_09420 4e3bd19d839c61fc93456156e8634a32 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 8.3E-40 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL538_09420 4e3bd19d839c61fc93456156e8634a32 185 SUPERFAMILY SSF55821 3 182 1.28E-57 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL538_09420 4e3bd19d839c61fc93456156e8634a32 185 Pfam PF01300 Telomere recombination 9 185 3.2E-50 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AL538_09420 4e3bd19d839c61fc93456156e8634a32 185 Gene3D G3DSA:3.90.870.10 1 183 2.7E-62 T 11-10-2018 AL538_09420 4e3bd19d839c61fc93456156e8634a32 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.155 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AL538_13260 3562a3f41ef63be94b4d49513c7eef73 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 13 209 2.3E-38 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL538_13260 3562a3f41ef63be94b4d49513c7eef73 212 SUPERFAMILY SSF89392 27 210 3.81E-49 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL538_13260 3562a3f41ef63be94b4d49513c7eef73 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 2.6E-43 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL538_13260 3562a3f41ef63be94b4d49513c7eef73 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.887 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AL538_13260 3562a3f41ef63be94b4d49513c7eef73 212 Gene3D G3DSA:2.50.20.10 32 211 1.7E-51 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Gene3D G3DSA:1.10.287.470 181 248 1.7E-17 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Gene3D G3DSA:2.40.50.100 71 168 2.2E-9 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 SUPERFAMILY SSF111369 63 155 2.88E-7 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 235 321 3.9E-8 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Gene3D G3DSA:2.40.30.170 282 331 1.7E-17 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Gene3D G3DSA:1.10.287.470 100 167 2.2E-9 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Gene3D G3DSA:2.40.50.100 180 281 1.7E-17 T 11-10-2018 AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 Pfam PF13533 Biotin-lipoyl like 72 110 1.1E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_22455 d70d5b6baddc46307d346188d7a601c0 407 SUPERFAMILY SSF111369 199 295 2.75E-7 T 11-10-2018 AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 39.023 T 11-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 Gene3D G3DSA:1.20.1720.10 4 380 4.1E-71 T 11-10-2018 AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 SUPERFAMILY SSF103473 2 383 1.83E-49 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 Pfam PF07690 Major Facilitator Superfamily 10 339 4.0E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_18015 e993a7bf64c37c41fceaa7e24290c6bf 396 ProSitePatterns PS00782 Transcription factor TFIIB repeat signature. 66 81 - T 11-10-2018 IPR023486 Transcription factor TFIIB, conserved site Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-674695|Reactome: R-HSA-6807505|Reactome: R-HSA-73776|Reactome: R-HSA-73779|Reactome: R-HSA-75953|Reactome: R-HSA-76042 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 SUPERFAMILY SSF53850 91 322 6.52E-42 T 11-10-2018 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 Gene3D G3DSA:3.40.190.10 93 303 5.3E-98 T 11-10-2018 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 Gene3D G3DSA:3.40.190.10 167 267 5.3E-98 T 11-10-2018 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_15635 9a704b0dd6fab86c0b5890c3b0469eaa 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26935 87e8b4a0c9eba7b7e7e3744de5a159c6 152 Pfam PF01475 Ferric uptake regulator family 19 141 6.9E-11 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL538_26935 87e8b4a0c9eba7b7e7e3744de5a159c6 152 Gene3D G3DSA:1.10.10.10 2 88 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26935 87e8b4a0c9eba7b7e7e3744de5a159c6 152 Gene3D G3DSA:3.30.1490.190 90 152 9.1E-13 T 11-10-2018 AL538_26935 87e8b4a0c9eba7b7e7e3744de5a159c6 152 SUPERFAMILY SSF46785 15 147 1.54E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 110 144 3.3E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.086 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 1.1E-23 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.57 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Gene3D G3DSA:3.40.1390.10 1 99 4.0E-32 T 11-10-2018 AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 6.5E-115 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 SUPERFAMILY SSF51161 32 316 1.25E-82 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_05425 b3c12bdee2c7ea9a456ee302fd6ae3cb 343 Gene3D G3DSA:2.160.10.10 100 308 4.9E-62 T 11-10-2018 AL538_19945 afbee36dbcf23af06d9684583286c825 601 SUPERFAMILY SSF51445 5 487 2.35E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_19945 afbee36dbcf23af06d9684583286c825 601 Pfam PF00128 Alpha amylase, catalytic domain 268 432 3.4E-13 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_19945 afbee36dbcf23af06d9684583286c825 601 Pfam PF00128 Alpha amylase, catalytic domain 46 145 6.9E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_19945 afbee36dbcf23af06d9684583286c825 601 Gene3D G3DSA:3.20.20.80 2 190 1.4E-23 T 11-10-2018 AL538_19945 afbee36dbcf23af06d9684583286c825 601 SMART SM00642 9 486 1.8E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_19945 afbee36dbcf23af06d9684583286c825 601 Gene3D G3DSA:3.20.20.80 236 460 4.0E-42 T 11-10-2018 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 Gene3D G3DSA:3.40.50.300 327 573 8.7E-76 T 11-10-2018 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 Pfam PF00005 ABC transporter 356 502 7.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 4.5E-135 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 Gene3D G3DSA:1.20.1560.10 1 321 8.5E-27 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 SMART SM00382 365 549 1.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 SUPERFAMILY SSF52540 335 571 2.24E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 Pfam PF00664 ABC transporter transmembrane region 65 272 1.8E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_16385 b446df9c069c74d7fde34cf7a86740eb 573 SUPERFAMILY SSF90123 7 323 4.32E-40 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 SUPERFAMILY SSF51905 1 416 1.26E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 SUPERFAMILY SSF54373 270 360 1.57E-17 T 11-10-2018 AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 Gene3D G3DSA:3.50.50.60 95 404 8.5E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.9E-73 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 Gene3D G3DSA:3.30.9.10 134 362 8.5E-53 T 11-10-2018 AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 46.376 T 11-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AL538_12475 16ba8b3b27608c00caa0b5490957dfa8 418 Gene3D G3DSA:3.50.50.60 1 87 1.5E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 SUPERFAMILY SSF50621 244 398 6.07E-35 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.8E-8 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 1.8E-8 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 1.8E-8 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 Gene3D G3DSA:3.20.20.10 34 263 2.9E-47 T 11-10-2018 IPR029066 PLP-binding barrel AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 282 4.1E-32 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 Gene3D G3DSA:2.40.37.10 264 399 9.6E-40 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 1.6E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.6E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 1.6E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 1.6E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 SUPERFAMILY SSF51419 32 285 3.49E-62 T 11-10-2018 IPR029066 PLP-binding barrel AL538_23465 29d3eb7a282f3bc394c00471ccf352a0 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 8.0E-14 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 SUPERFAMILY SSF48008 77 204 1.1E-13 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 SMART SM00895 80 204 1.5E-7 T 11-10-2018 IPR011711 GntR, C-terminal AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 Gene3D G3DSA:1.10.10.10 4 71 3.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 SMART SM00345 12 70 3.7E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 Gene3D G3DSA:1.20.120.530 73 208 1.4E-14 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 2.1E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 SUPERFAMILY SSF46785 4 74 1.93E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22350 6f73d95f1f9b489688dafb66933fb6d3 217 Pfam PF07729 FCD domain 81 200 4.5E-16 T 11-10-2018 IPR011711 GntR, C-terminal AL538_16930 dc02f438c41b575bfc599454421dca6d 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 441 2.4E-105 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_16930 dc02f438c41b575bfc599454421dca6d 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.5E-97 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_06155 2800ae338145a0a147c5f175310de611 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 7.6E-13 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 Gene3D G3DSA:3.30.230.70 234 550 3.0E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_06155 2800ae338145a0a147c5f175310de611 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.171 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF50249 608 695 3.17E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_06155 2800ae338145a0a147c5f175310de611 710 Gene3D G3DSA:3.30.1370.10 551 622 1.5E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 3.7E-23 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF54211 299 493 3.85E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF55666 146 236 9.96E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 11-10-2018 AL538_06155 2800ae338145a0a147c5f175310de611 710 SMART SM00316 621 691 3.3E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_06155 2800ae338145a0a147c5f175310de611 710 PIRSF PIRSF005499 2 710 1.8E-297 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF55666 451 550 9.68E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF54211 5 145 4.1E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF00013 KH domain 557 615 1.6E-8 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 3.8E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.8E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF46915 240 321 4.71E-19 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AL538_06155 2800ae338145a0a147c5f175310de611 710 SUPERFAMILY SSF54791 553 630 1.06E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AL538_06155 2800ae338145a0a147c5f175310de611 710 SMART SM00322 553 618 3.6E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL538_06155 2800ae338145a0a147c5f175310de611 710 Gene3D G3DSA:3.30.230.70 2 229 2.5E-77 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_11085 9a386bc08dde1901e7e50bfeb9250bea 176 SUPERFAMILY SSF50324 3 174 6.41E-64 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL538_11085 9a386bc08dde1901e7e50bfeb9250bea 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.404 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL538_11085 9a386bc08dde1901e7e50bfeb9250bea 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 7.8E-51 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL538_11085 9a386bc08dde1901e7e50bfeb9250bea 176 Gene3D G3DSA:3.90.80.10 1 175 1.3E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL538_11085 9a386bc08dde1901e7e50bfeb9250bea 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 Gene3D G3DSA:3.40.30.10 11 202 2.0E-78 T 11-10-2018 AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 SUPERFAMILY SSF47616 82 208 1.99E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 Gene3D G3DSA:1.20.1050.10 89 193 2.0E-78 T 11-10-2018 AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_11560 9c04a1f9e4f2b1552ff5be3e78414e5f 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 194 1.0E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL538_19330 80f1db8063ea57cc0ee8a23181e29940 232 Gene3D G3DSA:3.40.50.300 1 229 4.0E-67 T 11-10-2018 AL538_19330 80f1db8063ea57cc0ee8a23181e29940 232 SUPERFAMILY SSF52540 1 223 6.52E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19330 80f1db8063ea57cc0ee8a23181e29940 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19330 80f1db8063ea57cc0ee8a23181e29940 232 Pfam PF00005 ABC transporter 21 169 8.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19330 80f1db8063ea57cc0ee8a23181e29940 232 SMART SM00382 30 219 5.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_18330 c640ff42876059983205b745d208c30b 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 9.9E-126 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL538_18330 c640ff42876059983205b745d208c30b 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 2.3E-190 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AL538_18330 c640ff42876059983205b745d208c30b 726 SUPERFAMILY SSF51445 163 717 2.95E-148 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_14640 0da254964c2496488bcebe2db23b1641 166 PIRSF PIRSF006272 1 166 1.3E-79 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL538_14640 0da254964c2496488bcebe2db23b1641 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 6.0E-92 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL538_14640 0da254964c2496488bcebe2db23b1641 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 38.06 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL538_14640 0da254964c2496488bcebe2db23b1641 166 SUPERFAMILY SSF116960 1 166 2.09E-64 T 11-10-2018 AL538_14640 0da254964c2496488bcebe2db23b1641 166 Gene3D G3DSA:1.10.3190.10 54 166 9.7E-37 T 11-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily AL538_14640 0da254964c2496488bcebe2db23b1641 166 Gene3D G3DSA:1.10.287.680 1 53 1.2E-32 T 11-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily AL538_14640 0da254964c2496488bcebe2db23b1641 166 Pfam PF03887 YfbU domain 1 166 5.0E-70 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU AL538_18935 4744012d6129735f822c1c00266aab42 401 SUPERFAMILY SSF51556 63 359 3.78E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_18935 4744012d6129735f822c1c00266aab42 401 Gene3D G3DSA:3.20.20.140 63 359 4.9E-127 T 11-10-2018 AL538_18935 4744012d6129735f822c1c00266aab42 401 SUPERFAMILY SSF51338 14 390 6.98E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_18935 4744012d6129735f822c1c00266aab42 401 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 15 385 4.3E-93 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL538_18935 4744012d6129735f822c1c00266aab42 401 PIRSF PIRSF038994 9 392 9.4E-124 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL538_18935 4744012d6129735f822c1c00266aab42 401 Pfam PF01979 Amidohydrolase family 60 388 2.2E-23 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_18935 4744012d6129735f822c1c00266aab42 401 Gene3D G3DSA:2.30.40.10 18 386 4.9E-127 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_20495 e94ae55926078bd5a8b0ec1ffca8ad49 390 Gene3D G3DSA:1.25.40.10 27 169 1.2E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20495 e94ae55926078bd5a8b0ec1ffca8ad49 390 Gene3D G3DSA:1.25.40.10 170 304 1.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20495 e94ae55926078bd5a8b0ec1ffca8ad49 390 Pfam PF13181 Tetratricopeptide repeat 340 368 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_20495 e94ae55926078bd5a8b0ec1ffca8ad49 390 Gene3D G3DSA:1.25.40.10 305 387 1.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20495 e94ae55926078bd5a8b0ec1ffca8ad49 390 SUPERFAMILY SSF48452 101 368 1.61E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 Gene3D G3DSA:3.40.190.290 93 284 1.9E-39 T 11-10-2018 AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 SUPERFAMILY SSF46785 4 89 6.96E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 SUPERFAMILY SSF53850 89 286 1.34E-30 T 11-10-2018 AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 Pfam PF03466 LysR substrate binding domain 89 285 2.0E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_03535 f75455b65f756d1d6da483e406f0f54b 286 Gene3D G3DSA:1.10.10.10 3 92 1.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26070 bc7e92ea0ae4d7d6b6f0d516f449b905 139 Gene3D G3DSA:1.10.260.40 2 66 1.8E-5 T 11-10-2018 AL538_26070 bc7e92ea0ae4d7d6b6f0d516f449b905 139 SUPERFAMILY SSF47413 2 61 1.46E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_19280 107835b5c190ce8a984abd66f9bab3b8 210 Gene3D G3DSA:2.160.10.10 1 207 5.9E-59 T 11-10-2018 AL538_19280 107835b5c190ce8a984abd66f9bab3b8 210 SUPERFAMILY SSF51161 50 200 7.21E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_19280 107835b5c190ce8a984abd66f9bab3b8 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_19280 107835b5c190ce8a984abd66f9bab3b8 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.2E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 Pfam PF03466 LysR substrate binding domain 90 293 4.9E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 64 1.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 Gene3D G3DSA:3.40.190.10 161 269 1.4E-46 T 11-10-2018 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 SUPERFAMILY SSF46785 9 112 4.08E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 Gene3D G3DSA:3.40.190.10 101 292 1.4E-46 T 11-10-2018 AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 Gene3D G3DSA:1.10.10.10 6 96 2.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12480 7bbbe8a6fcf33bc4db34ee5b81d3138c 300 SUPERFAMILY SSF53850 90 297 1.16E-25 T 11-10-2018 AL538_13600 a984b2b1f30118a71e5e9a67781a428f 181 SUPERFAMILY SSF56300 2 164 1.61E-36 T 11-10-2018 AL538_13600 a984b2b1f30118a71e5e9a67781a428f 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 167 1.8E-28 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AL538_13600 a984b2b1f30118a71e5e9a67781a428f 181 Gene3D G3DSA:3.60.21.10 1 181 1.0E-60 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_13600 a984b2b1f30118a71e5e9a67781a428f 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 2.6E-22 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AL538_21875 e315059b73e9eacb5f06f50101d49ef2 125 Gene3D G3DSA:3.90.1150.30 1 120 1.4E-12 T 11-10-2018 IPR038056 YjbR-like superfamily AL538_21875 e315059b73e9eacb5f06f50101d49ef2 125 Pfam PF04237 YjbR 12 103 1.6E-13 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AL538_21875 e315059b73e9eacb5f06f50101d49ef2 125 SUPERFAMILY SSF142906 1 118 1.01E-29 T 11-10-2018 IPR038056 YjbR-like superfamily AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 SUPERFAMILY SSF46785 1 93 3.3E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 Pfam PF12840 Helix-turn-helix domain 8 69 2.8E-11 T 11-10-2018 AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 SMART SM00418 8 88 5.8E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 Gene3D G3DSA:1.10.10.10 1 97 4.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 9.5E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 9.5E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26475 7dca25a6c90dee00336e9a4a09018fdc 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 9.5E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 SUPERFAMILY SSF51206 201 311 5.76E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 SMART SM00387 528 641 1.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 287 1.6E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 366 1.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 SUPERFAMILY SSF47384 335 371 2.16E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 640 3.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Gene3D G3DSA:2.60.120.10 180 318 5.2E-17 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 SUPERFAMILY SSF55874 484 639 2.88E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Gene3D G3DSA:3.30.565.10 492 645 2.3E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 Gene3D G3DSA:3.40.50.2300 2 144 5.8E-8 T 11-10-2018 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 4.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 4.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 4.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16330 562ddf49efb95bd5aacbea10fdf35b64 646 SUPERFAMILY SSF52172 3 143 1.1E-6 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 PIRSF PIRSF039085 4 243 1.9E-103 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 Gene3D G3DSA:3.40.50.300 5 244 9.5E-76 T 11-10-2018 AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 SMART SM00382 32 215 5.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 SUPERFAMILY SSF52540 8 237 1.18E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23975 c512a7aa399e324d02c6b7c60397fe7d 244 Pfam PF00005 ABC transporter 23 167 1.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 PIRSF PIRSF028774 1 362 7.7E-193 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.325 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 Gene3D G3DSA:3.30.70.2810 1 79 8.7E-33 T 11-10-2018 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 Gene3D G3DSA:3.40.50.150 178 358 3.2E-52 T 11-10-2018 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.6E-5 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 SUPERFAMILY SSF53335 186 298 1.56E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_12930 2ace6a3fa24cc4a44f10551874c27efd 363 Gene3D G3DSA:3.30.2300.20 80 177 1.9E-39 T 11-10-2018 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Gene3D G3DSA:3.40.50.150 89 433 1.6E-117 T 11-10-2018 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 1.1E-33 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 11-10-2018 IPR002792 TRAM domain AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.266 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 SUPERFAMILY SSF53335 77 438 1.38E-86 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Gene3D G3DSA:2.40.50.140 1 88 1.1E-28 T 11-10-2018 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 Gene3D G3DSA:3.40.1350.30 135 271 1.6E-117 T 11-10-2018 AL538_06765 61e2a97c6cffe8b9cc3a6d9185a85256 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 4.6E-128 T 11-10-2018 AL538_07835 a660179fb927537f54138c8549b66cb3 378 SUPERFAMILY SSF53187 3 377 1.43E-57 T 11-10-2018 AL538_07835 a660179fb927537f54138c8549b66cb3 378 Gene3D G3DSA:3.30.70.360 177 292 2.9E-79 T 11-10-2018 AL538_07835 a660179fb927537f54138c8549b66cb3 378 SUPERFAMILY SSF55031 177 290 1.47E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_07835 a660179fb927537f54138c8549b66cb3 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL538_07835 a660179fb927537f54138c8549b66cb3 378 Gene3D G3DSA:3.40.630.10 27 360 2.9E-79 T 11-10-2018 AL538_07835 a660179fb927537f54138c8549b66cb3 378 Pfam PF07687 Peptidase dimerisation domain 174 285 5.9E-26 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_07835 a660179fb927537f54138c8549b66cb3 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.7E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_07835 a660179fb927537f54138c8549b66cb3 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL538_07835 a660179fb927537f54138c8549b66cb3 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 65.691 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL538_07835 a660179fb927537f54138c8549b66cb3 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.3E-128 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AL538_16890 ae53e2f5ed1f238ca086b9af62e001f7 324 PIRSF PIRSF017082 1 324 2.2E-85 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL538_16890 ae53e2f5ed1f238ca086b9af62e001f7 324 SUPERFAMILY SSF53850 104 289 1.52E-9 T 11-10-2018 AL538_16890 ae53e2f5ed1f238ca086b9af62e001f7 324 Gene3D G3DSA:3.40.190.10 123 249 1.6E-59 T 11-10-2018 AL538_16890 ae53e2f5ed1f238ca086b9af62e001f7 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 1.0E-26 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 AL538_16890 ae53e2f5ed1f238ca086b9af62e001f7 324 Gene3D G3DSA:3.40.190.150 29 314 1.6E-59 T 11-10-2018 AL538_15040 6319c8195c51e0b8e857a9de528ce8c4 224 Gene3D G3DSA:3.40.50.1000 8 206 4.7E-51 T 11-10-2018 IPR023214 HAD superfamily AL538_15040 6319c8195c51e0b8e857a9de528ce8c4 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 8.0E-23 T 11-10-2018 AL538_15040 6319c8195c51e0b8e857a9de528ce8c4 224 Gene3D G3DSA:1.10.150.240 21 83 4.7E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_15040 6319c8195c51e0b8e857a9de528ce8c4 224 SUPERFAMILY SSF56784 6 206 1.49E-34 T 11-10-2018 IPR036412 HAD-like superfamily AL538_15040 6319c8195c51e0b8e857a9de528ce8c4 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 133 184 8.0E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 SUPERFAMILY SSF46785 5 61 4.6E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17745 93d8cc647271dc27f426c1daeef296af 258 SUPERFAMILY SSF100950 82 239 1.57E-19 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_17745 93d8cc647271dc27f426c1daeef296af 258 Pfam PF00455 DeoR C terminal sensor domain 83 238 3.5E-33 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_17745 93d8cc647271dc27f426c1daeef296af 258 Gene3D G3DSA:1.10.10.10 1 56 4.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17745 93d8cc647271dc27f426c1daeef296af 258 SMART SM01134 81 239 7.2E-36 T 11-10-2018 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 SMART SM00420 6 58 2.5E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17745 93d8cc647271dc27f426c1daeef296af 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 8.6E-31 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 SUPERFAMILY SSF63848 113 218 4.18E-30 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.112 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.3E-32 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 4.1E-78 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 Gene3D G3DSA:2.160.20.70 113 220 4.2E-31 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AL538_13885 306d48930c32b257ea01eff94e95ead6 220 Gene3D G3DSA:3.30.750.120 2 112 4.7E-34 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AL538_04215 5b8889a968c1908b4667c2b92e868556 119 Pfam PF05509 TraY domain 11 55 6.4E-16 T 11-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 SMART SM00490 265 344 1.1E-10 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 Gene3D G3DSA:3.40.50.300 1 168 2.0E-29 T 11-10-2018 AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 Gene3D G3DSA:3.40.50.300 209 367 2.7E-33 T 11-10-2018 AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 SMART SM00487 1 177 1.8E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 9.2E-24 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 SUPERFAMILY SSF52540 48 362 3.39E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16195 08b60e0f9485ed76156b0496074b85ac 583 Pfam PF00271 Helicase conserved C-terminal domain 239 342 6.5E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_06990 b3e98ad36141affdcd1894399d1f253f 368 Gene3D G3DSA:3.40.50.300 99 356 1.3E-86 T 11-10-2018 AL538_06990 b3e98ad36141affdcd1894399d1f253f 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.7E-125 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AL538_06990 b3e98ad36141affdcd1894399d1f253f 368 SUPERFAMILY SSF52540 4 334 1.7E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06990 b3e98ad36141affdcd1894399d1f253f 368 Pfam PF00437 Type II/IV secretion system protein 116 249 7.0E-36 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_06990 b3e98ad36141affdcd1894399d1f253f 368 Gene3D G3DSA:3.30.450.90 1 97 3.9E-22 T 11-10-2018 AL538_19845 668124df8545433dda0b52ee69947b6a 412 SUPERFAMILY SSF52540 68 351 1.82E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19845 668124df8545433dda0b52ee69947b6a 412 Gene3D G3DSA:3.40.50.300 1 202 3.5E-68 T 11-10-2018 AL538_19845 668124df8545433dda0b52ee69947b6a 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_19845 668124df8545433dda0b52ee69947b6a 412 SMART SM00490 250 331 7.8E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_19845 668124df8545433dda0b52ee69947b6a 412 Gene3D G3DSA:3.40.50.300 205 390 6.3E-44 T 11-10-2018 AL538_19845 668124df8545433dda0b52ee69947b6a 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 5.2E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_19845 668124df8545433dda0b52ee69947b6a 412 SMART SM00487 19 214 3.7E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_19845 668124df8545433dda0b52ee69947b6a 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 7.7E-26 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_25410 cfe3f8155359a95da3fee5f99500f409 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 9.1E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_25410 cfe3f8155359a95da3fee5f99500f409 222 SUPERFAMILY SSF161098 9 202 2.49E-30 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25410 cfe3f8155359a95da3fee5f99500f409 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 6.1E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_25410 cfe3f8155359a95da3fee5f99500f409 222 Gene3D G3DSA:1.10.3720.10 3 217 2.4E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL538_16575 9765bac113467203228e73e05e5657a9 294 SUPERFAMILY SSF53807 32 286 7.85E-46 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 182 197 5.0E-19 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 84 99 5.0E-19 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 53 71 5.0E-19 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 206 224 5.0E-19 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 270 283 5.0E-19 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 Gene3D G3DSA:3.40.50.1980 123 291 6.9E-49 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 Gene3D G3DSA:3.40.50.1980 31 120 2.7E-23 T 11-10-2018 AL538_16575 9765bac113467203228e73e05e5657a9 294 Pfam PF01497 Periplasmic binding protein 37 251 3.0E-24 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_28310 ad4d55357ac6a5b04e50d48b7a98f396 74 Pfam PF07191 zinc-ribbons 5 68 3.5E-27 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AL538_28310 ad4d55357ac6a5b04e50d48b7a98f396 74 Gene3D G3DSA:2.10.290.10 2 71 5.3E-27 T 11-10-2018 IPR029037 YfgJ-like AL538_28310 ad4d55357ac6a5b04e50d48b7a98f396 74 SUPERFAMILY SSF161187 4 70 5.75E-27 T 11-10-2018 AL538_28310 ad4d55357ac6a5b04e50d48b7a98f396 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 5.0E-28 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 SMART SM00155 126 152 5.3E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 SMART SM00155 347 374 0.079 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 SUPERFAMILY SSF56024 16 182 1.41E-26 T 11-10-2018 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 Pfam PF13091 PLD-like domain 251 401 6.9E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 Pfam PF13091 PLD-like domain 34 153 2.2E-7 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 Gene3D G3DSA:3.30.870.10 12 441 1.4E-165 T 11-10-2018 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 SUPERFAMILY SSF56024 248 424 2.88E-26 T 11-10-2018 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 PIRSF PIRSF000850 3 446 7.6E-213 T 11-10-2018 AL538_08735 87b43d09aca1a7a22f16eb58a764270c 446 Gene3D G3DSA:3.30.870.10 18 225 1.4E-165 T 11-10-2018 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 297 314 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 93 122 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 243 272 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 210 238 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 127 156 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 PRINTS PR00142 RecA protein signature 165 194 9.5E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 SMART SM00382 57 228 4.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 Gene3D G3DSA:3.30.250.10 268 326 4.0E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 11-10-2018 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 SUPERFAMILY SSF54752 269 325 1.1E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.4E-169 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AL538_06690 d648b4fc021b2d2217175dbc6f55d6d6 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.49 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_23285 b1b20d268d6e97dee4990be7603a8f6b 328 Pfam PF01551 Peptidase family M23 198 291 1.2E-30 T 11-10-2018 IPR016047 Peptidase M23 AL538_23285 b1b20d268d6e97dee4990be7603a8f6b 328 Gene3D G3DSA:3.10.450.350 69 166 1.8E-8 T 11-10-2018 AL538_23285 b1b20d268d6e97dee4990be7603a8f6b 328 Gene3D G3DSA:2.70.70.10 169 296 4.8E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_23285 b1b20d268d6e97dee4990be7603a8f6b 328 SUPERFAMILY SSF51261 67 296 3.98E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 Gene3D G3DSA:1.10.10.10 4 137 1.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 SMART SM00347 23 124 8.7E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 SUPERFAMILY SSF46785 13 136 2.06E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_06145 60abbefd226fe12facd0affcb17af7ad 137 Pfam PF01047 MarR family 31 88 4.7E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_24025 5b2f8d9f8d978c3a054626dbf9e9abfe 584 SUPERFAMILY SSF109604 398 570 9.11E-39 T 11-10-2018 AL538_24025 5b2f8d9f8d978c3a054626dbf9e9abfe 584 Pfam PF01966 HD domain 407 529 1.2E-17 T 11-10-2018 IPR006674 HD domain AL538_24025 5b2f8d9f8d978c3a054626dbf9e9abfe 584 Gene3D G3DSA:1.10.3210.10 382 583 1.2E-70 T 11-10-2018 AL538_24025 5b2f8d9f8d978c3a054626dbf9e9abfe 584 SMART SM00471 402 539 3.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 Gene3D G3DSA:1.10.10.60 57 111 5.8E-17 T 11-10-2018 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 SUPERFAMILY SSF55136 138 286 4.84E-26 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 Pfam PF12833 Helix-turn-helix domain 29 108 3.2E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 1.1E-27 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 Gene3D G3DSA:1.10.10.60 1 56 6.7E-16 T 11-10-2018 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 SMART SM00871 137 287 8.0E-17 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 SUPERFAMILY SSF46689 60 109 3.67E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 Gene3D G3DSA:3.20.80.10 138 287 1.8E-27 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 SMART SM00342 23 107 2.1E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 5.5E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 5.5E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_21935 825fb7c8917d5a9e97bc97ec7f249ad3 289 SUPERFAMILY SSF46689 7 57 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 Gene3D G3DSA:3.30.70.1630 26 187 4.1E-41 T 11-10-2018 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 144 1.1E-5 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 SUPERFAMILY SSF101790 237 320 2.22E-18 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 PIRSF PIRSF006487 158 318 0.22 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 PIRSF PIRSF006487 20 156 3.4E-5 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 Gene3D G3DSA:3.30.70.1400 29 115 4.1E-41 T 11-10-2018 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 Gene3D G3DSA:2.40.30.160 190 310 1.2E-33 T 11-10-2018 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.0E-25 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 43.389 T 11-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 AL538_06845 74ad118b9a12bc6d02a3e2a0ae52e558 322 SUPERFAMILY SSF103025 13 236 3.77E-56 T 11-10-2018 AL538_01930 811c4232c1f814a02e1a15aae1f5d3dd 342 SUPERFAMILY SSF53187 9 329 6.28E-76 T 11-10-2018 AL538_01930 811c4232c1f814a02e1a15aae1f5d3dd 342 Gene3D G3DSA:3.40.630.10 1 342 6.5E-122 T 11-10-2018 AL538_01930 811c4232c1f814a02e1a15aae1f5d3dd 342 PIRSF PIRSF017020 4 336 2.9E-127 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL538_01930 811c4232c1f814a02e1a15aae1f5d3dd 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.644 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AL538_01930 811c4232c1f814a02e1a15aae1f5d3dd 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 3.9E-69 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 SUPERFAMILY SSF53335 45 274 1.63E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.1E-109 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.852 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 PIRSF PIRSF000401 1 295 8.1E-100 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 Gene3D G3DSA:3.40.50.150 102 294 3.0E-57 T 11-10-2018 AL538_08485 97083cdc0a5c1de7711842e5320b542b 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 3.2E-105 T 11-10-2018 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 Gene3D G3DSA:3.40.190.10 162 261 1.3E-47 T 11-10-2018 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 Pfam PF03466 LysR substrate binding domain 87 287 1.5E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 Gene3D G3DSA:1.10.10.10 1 89 1.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 SUPERFAMILY SSF53850 86 291 9.41E-37 T 11-10-2018 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 Gene3D G3DSA:3.40.190.10 103 286 1.3E-47 T 11-10-2018 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 SUPERFAMILY SSF46785 2 86 1.68E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21750 2f7f8ac9324c3e0c480844db395bb0d7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 Gene3D G3DSA:3.40.190.10 103 288 1.2E-58 T 11-10-2018 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 Pfam PF03466 LysR substrate binding domain 91 291 2.3E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 Gene3D G3DSA:1.10.10.10 7 95 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 Gene3D G3DSA:3.40.190.10 163 261 1.2E-58 T 11-10-2018 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 SUPERFAMILY SSF53850 92 296 3.44E-38 T 11-10-2018 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12915 f8f0c9c1a7b791a713dfe00e63ba3ff6 306 SUPERFAMILY SSF46785 3 85 4.34E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01830 d9da41dffb642d935c56d050449f9e83 391 SUPERFAMILY SSF53335 105 380 1.98E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_01830 d9da41dffb642d935c56d050449f9e83 391 Gene3D G3DSA:3.40.50.150 100 380 1.3E-78 T 11-10-2018 AL538_01830 d9da41dffb642d935c56d050449f9e83 391 PIRSF PIRSF029038 56 391 2.4E-159 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL538_01830 d9da41dffb642d935c56d050449f9e83 391 Pfam PF05971 Protein of unknown function (DUF890) 66 380 3.4E-130 T 11-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AL538_01830 d9da41dffb642d935c56d050449f9e83 391 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 67 382 54.026 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Gene3D G3DSA:3.40.1190.10 97 299 3.3E-67 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 SUPERFAMILY SSF53623 98 297 3.14E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 355 7.6E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 SUPERFAMILY SSF53244 299 435 9.61E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Gene3D G3DSA:3.90.190.20 300 433 2.5E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Gene3D G3DSA:3.40.50.720 5 96 6.9E-20 T 11-10-2018 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 SUPERFAMILY SSF51984 9 97 9.55E-17 T 11-10-2018 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Pfam PF08245 Mur ligase middle domain 113 279 1.4E-31 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.273 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_11630 53838f2fbfc34e4cfe362e9c04c936bb 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 1.2E-131 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_03360 763b6db1b9d0b69cc84055ec8d185b4e 285 Gene3D G3DSA:3.20.20.140 3 250 1.2E-82 T 11-10-2018 AL538_03360 763b6db1b9d0b69cc84055ec8d185b4e 285 Pfam PF02811 PHP domain 4 158 3.0E-9 T 11-10-2018 IPR004013 PHP domain GO:0003824 AL538_03360 763b6db1b9d0b69cc84055ec8d185b4e 285 SUPERFAMILY SSF89550 1 275 2.88E-54 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL538_03360 763b6db1b9d0b69cc84055ec8d185b4e 285 SMART SM00481 3 70 1.3E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL538_03360 763b6db1b9d0b69cc84055ec8d185b4e 285 Gene3D G3DSA:1.10.150.650 98 169 1.2E-82 T 11-10-2018 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 1.2E-5 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 1.2E-5 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.2E-5 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 306 325 1.2E-5 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 Gene3D G3DSA:2.40.160.10 22 342 2.4E-53 T 11-10-2018 IPR023614 Porin domain superfamily AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 Pfam PF13609 Gram-negative porin 8 325 8.3E-17 T 11-10-2018 AL538_26250 040fd50a755694b833b6f779fb5f3d20 342 SUPERFAMILY SSF56935 22 341 3.66E-53 T 11-10-2018 AL538_18675 ea3b871cf75f06b9ff54cb7c35f92865 214 SUPERFAMILY SSF56925 23 214 1.12E-33 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_18675 ea3b871cf75f06b9ff54cb7c35f92865 214 Pfam PF03922 OmpW family 24 214 1.8E-70 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AL538_18675 ea3b871cf75f06b9ff54cb7c35f92865 214 Gene3D G3DSA:2.40.160.20 22 214 6.2E-81 T 11-10-2018 AL538_24045 92770fbd977f09fa587165741b32b37a 417 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_24045 92770fbd977f09fa587165741b32b37a 417 Gene3D G3DSA:3.40.50.300 213 417 1.4E-48 T 11-10-2018 AL538_24045 92770fbd977f09fa587165741b32b37a 417 SMART SM00490 257 338 3.0E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_24045 92770fbd977f09fa587165741b32b37a 417 SMART SM00487 22 221 4.4E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_24045 92770fbd977f09fa587165741b32b37a 417 SUPERFAMILY SSF52540 74 359 2.48E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24045 92770fbd977f09fa587165741b32b37a 417 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.4E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_24045 92770fbd977f09fa587165741b32b37a 417 Pfam PF00270 DEAD/DEAH box helicase 27 194 5.3E-56 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_24045 92770fbd977f09fa587165741b32b37a 417 Gene3D G3DSA:3.40.50.300 2 209 9.2E-78 T 11-10-2018 AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 SMART SM01134 75 236 1.4E-66 T 11-10-2018 AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 SUPERFAMILY SSF46785 7 73 2.14E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 Gene3D G3DSA:1.10.10.10 1 54 1.5E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 SUPERFAMILY SSF100950 76 236 1.02E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 Pfam PF00455 DeoR C terminal sensor domain 77 235 5.8E-50 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 SMART SM00420 8 60 3.9E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_18975 a79f54367ac5585b0b5f0d7aeaffaabf 256 Pfam PF08220 DeoR-like helix-turn-helix domain 8 63 2.5E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_27325 a09ece231c49fbeeb65462bd87600d58 217 Pfam PF12973 ChrR Cupin-like domain 127 211 1.3E-29 T 11-10-2018 IPR025979 ChrR-like cupin domain AL538_27325 a09ece231c49fbeeb65462bd87600d58 217 Pfam PF12973 ChrR Cupin-like domain 18 108 2.0E-40 T 11-10-2018 IPR025979 ChrR-like cupin domain AL538_27325 a09ece231c49fbeeb65462bd87600d58 217 SUPERFAMILY SSF51182 2 122 1.52E-35 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_27325 a09ece231c49fbeeb65462bd87600d58 217 SUPERFAMILY SSF51182 116 216 8.34E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_27325 a09ece231c49fbeeb65462bd87600d58 217 Gene3D G3DSA:2.60.120.10 1 159 7.1E-65 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_19700 8db93110063e3252223619dd8107250c 270 Gene3D G3DSA:1.10.10.60 163 269 1.6E-25 T 11-10-2018 AL538_19700 8db93110063e3252223619dd8107250c 270 SUPERFAMILY SSF46689 222 267 6.81E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19700 8db93110063e3252223619dd8107250c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19700 8db93110063e3252223619dd8107250c 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19700 8db93110063e3252223619dd8107250c 270 SMART SM00342 185 268 2.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19700 8db93110063e3252223619dd8107250c 270 Pfam PF12833 Helix-turn-helix domain 192 266 5.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19700 8db93110063e3252223619dd8107250c 270 SUPERFAMILY SSF46689 170 219 6.09E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 3.8E-159 T 11-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 Gene3D G3DSA:3.40.190.10 133 311 7.0E-79 T 11-10-2018 AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 SUPERFAMILY SSF53850 27 326 3.39E-63 T 11-10-2018 AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 Gene3D G3DSA:3.40.190.10 30 297 7.0E-79 T 11-10-2018 AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 295 1.8E-26 T 11-10-2018 AL538_20900 dfb78f7856ec7d0a17e886b5237a8702 336 PIRSF PIRSF002825 2 329 1.6E-79 T 11-10-2018 IPR026045 Ferric binding protein AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 SUPERFAMILY SSF64182 1 298 3.66E-67 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 Pfam PF02833 DHHA2 domain 180 297 4.6E-15 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 SMART SM01131 178 300 3.2E-33 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 Pfam PF01368 DHH family 2 142 4.1E-22 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 Gene3D G3DSA:3.90.1640.10 1 186 1.3E-63 T 11-10-2018 AL538_15945 e7ffa8fcd8704eadb69c5f3e1e62e87a 301 Gene3D G3DSA:3.10.310.20 187 301 2.8E-22 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL538_15215 6bcfade452abc583210cbff3a865b721 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 2.9E-31 T 11-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 AL538_15215 6bcfade452abc583210cbff3a865b721 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.5E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_15215 6bcfade452abc583210cbff3a865b721 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.5E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_15215 6bcfade452abc583210cbff3a865b721 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.5E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_15215 6bcfade452abc583210cbff3a865b721 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 7.7E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_15215 6bcfade452abc583210cbff3a865b721 88 PIRSF PIRSF004669 1 88 3.1E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 Pfam PF02803 Thiolase, C-terminal domain 270 399 3.3E-41 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.7E-100 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 5.9E-141 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 SUPERFAMILY SSF53901 4 270 7.07E-85 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 PIRSF PIRSF000429 1 401 4.8E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 Gene3D G3DSA:3.40.47.10 6 276 5.9E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 Gene3D G3DSA:3.40.47.10 126 398 5.9E-146 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 SUPERFAMILY SSF53901 271 400 4.43E-35 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_18445 7d69c0618df878d2caeaa10b3378df5d 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL538_22230 72aa7840e5013a3057862c7fa5542e2e 173 Gene3D G3DSA:3.40.50.620 1 173 4.7E-43 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_22230 72aa7840e5013a3057862c7fa5542e2e 173 Pfam PF01467 Cytidylyltransferase-like 7 144 1.2E-6 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_22230 72aa7840e5013a3057862c7fa5542e2e 173 SUPERFAMILY SSF52374 1 170 1.75E-24 T 11-10-2018 AL538_23470 b40bcb37d89fc6a21cd9958e3a447e9d 608 Pfam PF04183 IucA / IucC family 164 383 1.6E-49 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AL538_23470 b40bcb37d89fc6a21cd9958e3a447e9d 608 Gene3D G3DSA:1.10.340.60 499 568 4.2E-20 T 11-10-2018 AL538_23470 b40bcb37d89fc6a21cd9958e3a447e9d 608 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 589 8.8E-30 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82714 184 273 7.32E-23 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82693 136 332 6.8E-22 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82714 725 810 1.06E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 3.9E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82693 565 674 2.35E-22 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82866 299 500 1.83E-47 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82866 808 1035 5.23E-45 T 11-10-2018 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_22720 3357d8accaffa0094a36da7fb5d873a5 1050 SUPERFAMILY SSF82693 39 132 5.75E-26 T 11-10-2018 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 Gene3D G3DSA:3.20.10.10 113 271 2.9E-50 T 11-10-2018 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 SUPERFAMILY SSF56752 1 266 3.79E-68 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 Gene3D G3DSA:3.30.470.10 1 106 5.7E-25 T 11-10-2018 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 266 7.5E-103 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AL538_03880 253982bdac762e8d8b7922aea92e138b 271 Pfam PF01063 Amino-transferase class IV 24 247 9.7E-43 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AL538_12870 cd005adc565db92180fa95d2d880bb20 155 Pfam PF01029 NusB family 11 149 2.7E-35 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AL538_12870 cd005adc565db92180fa95d2d880bb20 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.065 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AL538_12870 cd005adc565db92180fa95d2d880bb20 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 8.9E-43 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AL538_12870 cd005adc565db92180fa95d2d880bb20 155 Gene3D G3DSA:1.10.940.10 3 155 8.1E-48 T 11-10-2018 IPR035926 NusB-like superfamily AL538_12870 cd005adc565db92180fa95d2d880bb20 155 SUPERFAMILY SSF48013 7 153 3.53E-39 T 11-10-2018 IPR035926 NusB-like superfamily AL538_11135 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11135 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 75 156 5.6E-34 T 11-10-2018 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 8.8E-22 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 1 74 7.9E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11135 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.6E-24 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 AL538_11135 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF47384 661 740 3.53E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 249 4.6E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Pfam PF00512 His Kinase A (phospho-acceptor) domain 675 738 2.5E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF52172 975 1108 5.12E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.30.565.10 741 899 7.4E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:1.20.120.160 1105 1205 1.5E-5 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SMART SM00388 674 739 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.40.50.2300 967 1104 2.1E-34 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF55874 728 896 3.93E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.30.450.20 535 663 2.9E-6 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF47226 1110 1202 4.97E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Pfam PF01627 Hpt domain 1142 1200 5.0E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 850 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 875 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 822 836 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 881 894 1.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.40.190.10 277 491 3.2E-15 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Pfam PF00072 Response regulator receiver domain 976 1092 1.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 790 896 7.6E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SMART SM00387 786 897 1.6E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:1.10.287.130 664 740 3.2E-18 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SMART SM00062 44 260 0.0065 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF53850 273 496 2.17E-14 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SUPERFAMILY SSF53850 45 249 1.52E-22 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 SMART SM00448 974 1094 1.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.40.190.10 35 253 2.0E-26 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.40.190.10 129 221 2.0E-26 T 11-10-2018 AL538_25840 32c95086eab2664a74b062a60afd4552 1207 Gene3D G3DSA:3.40.190.10 366 453 3.2E-15 T 11-10-2018 AL538_01270 552fee62794c8a65ab494171aa08ba65 156 SUPERFAMILY SSF110087 4 146 2.88E-22 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_01270 552fee62794c8a65ab494171aa08ba65 156 Gene3D G3DSA:2.60.40.1890 26 149 4.9E-17 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_01270 552fee62794c8a65ab494171aa08ba65 156 Pfam PF04314 Copper chaperone PCu(A)C 59 132 2.7E-14 T 11-10-2018 IPR007410 Copper chaperone PCuAC AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 3.4E-89 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 Gene3D G3DSA:3.40.630.10 1 249 1.7E-65 T 11-10-2018 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 Gene3D G3DSA:3.40.630.10 379 490 7.1E-24 T 11-10-2018 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 PIRSF PIRSF016599 5 489 1.7E-216 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 7.3E-182 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 4.0E-21 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 SUPERFAMILY SSF53187 15 486 4.1E-62 T 11-10-2018 AL538_12810 b136aec8de3be271a1d54de1d06900db 490 Pfam PF07687 Peptidase dimerisation domain 211 296 2.2E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_22150 df9d2c0139a6b4eea97495a2209f99a3 161 Gene3D G3DSA:3.10.129.10 2 161 4.6E-44 T 11-10-2018 AL538_22150 df9d2c0139a6b4eea97495a2209f99a3 161 Pfam PF03061 Thioesterase superfamily 22 97 8.3E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL538_22150 df9d2c0139a6b4eea97495a2209f99a3 161 SUPERFAMILY SSF54637 6 150 1.76E-41 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_03420 ec2d1164f4546302a7915305073c01f0 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.57 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL538_03420 ec2d1164f4546302a7915305073c01f0 190 Pfam PF04279 Intracellular septation protein A 1 174 2.5E-67 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL538_03420 ec2d1164f4546302a7915305073c01f0 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.4E-63 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL538_14780 cdf200734d90928a0627044e16c89bab 426 SUPERFAMILY SSF55205 1 424 8.37E-145 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL538_14780 cdf200734d90928a0627044e16c89bab 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 5.0E-156 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL538_14780 cdf200734d90928a0627044e16c89bab 426 PIRSF PIRSF000505 1 426 1.8E-155 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL538_14780 cdf200734d90928a0627044e16c89bab 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL538_14780 cdf200734d90928a0627044e16c89bab 426 Gene3D G3DSA:3.65.10.10 20 224 3.2E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL538_14780 cdf200734d90928a0627044e16c89bab 426 Gene3D G3DSA:3.65.10.10 242 419 3.2E-160 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL538_14780 cdf200734d90928a0627044e16c89bab 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 4.9E-142 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL538_14780 cdf200734d90928a0627044e16c89bab 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL538_14780 cdf200734d90928a0627044e16c89bab 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.494 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AL538_03945 e03930e89ed6fb011252087272e3d5e0 519 Pfam PF01740 STAS domain 417 503 9.3E-6 T 11-10-2018 IPR002645 STAS domain AL538_03945 e03930e89ed6fb011252087272e3d5e0 519 SUPERFAMILY SSF52091 416 498 7.26E-12 T 11-10-2018 IPR036513 STAS domain superfamily AL538_03945 e03930e89ed6fb011252087272e3d5e0 519 Gene3D G3DSA:3.30.750.24 409 499 3.1E-26 T 11-10-2018 IPR036513 STAS domain superfamily AL538_03945 e03930e89ed6fb011252087272e3d5e0 519 Pfam PF00916 Sulfate permease family 13 374 1.8E-56 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 SUPERFAMILY SSF52540 4 238 1.23E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 SMART SM00382 25 177 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 Gene3D G3DSA:1.10.8.60 177 260 5.1E-25 T 11-10-2018 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 8.1E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 8.1E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 Gene3D G3DSA:1.10.10.60 264 333 1.1E-7 T 11-10-2018 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 SUPERFAMILY SSF46689 219 332 9.41E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 Gene3D G3DSA:3.40.50.300 1 176 8.1E-58 T 11-10-2018 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 2.0E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 6.0E-166 T 11-10-2018 IPR014317 Transcription activator PspF AL538_15980 add3c800048c3ebdaf8df40fbe9fdef9 336 Pfam PF00158 Sigma-54 interaction domain 5 167 1.4E-57 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_00015 3ee6f667844ac89c046750d985d36081 127 SUPERFAMILY SSF47226 11 119 1.18E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_00015 3ee6f667844ac89c046750d985d36081 127 Pfam PF01627 Hpt domain 34 109 2.2E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_00015 3ee6f667844ac89c046750d985d36081 127 Gene3D G3DSA:1.20.120.160 4 119 5.9E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 4.0E-85 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.7E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 Gene3D G3DSA:3.40.50.880 1 193 8.3E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 11-10-2018 AL538_08015 fd2d168e0af745a4dab6caf4d42fea8e 195 SUPERFAMILY SSF52317 1 191 4.03E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_11235 730b4444e937686d84954e05e72f470a 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AL538_11235 730b4444e937686d84954e05e72f470a 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.294 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL538_11235 730b4444e937686d84954e05e72f470a 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 1.5E-136 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL538_11235 730b4444e937686d84954e05e72f470a 363 SMART SM01329 7 356 2.6E-203 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AL538_11235 730b4444e937686d84954e05e72f470a 363 Gene3D G3DSA:3.40.718.10 1 363 1.5E-157 T 11-10-2018 AL538_11235 730b4444e937686d84954e05e72f470a 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 4.6E-165 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AL538_11235 730b4444e937686d84954e05e72f470a 363 SUPERFAMILY SSF53659 4 361 2.11E-123 T 11-10-2018 AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 PRINTS PR00990 Ribokinase signature 22 41 1.0E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 PRINTS PR00990 Ribokinase signature 175 190 1.0E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 PRINTS PR00990 Ribokinase signature 214 225 1.0E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 2.1E-68 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 SUPERFAMILY SSF53613 1 305 2.81E-82 T 11-10-2018 IPR029056 Ribokinase-like AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 Gene3D G3DSA:3.40.1190.20 1 306 8.7E-96 T 11-10-2018 IPR029056 Ribokinase-like AL538_15330 b1f03b602e704b7d63dc7e03cef46b84 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_00850 52ba2a3f22c77366ffbe82212086f4b2 80 SUPERFAMILY SSF52833 1 73 7.95E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_00850 52ba2a3f22c77366ffbe82212086f4b2 80 Gene3D G3DSA:3.40.30.10 1 80 4.0E-21 T 11-10-2018 AL538_00850 52ba2a3f22c77366ffbe82212086f4b2 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 71 8.8E-19 T 11-10-2018 IPR008554 Glutaredoxin-like AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 Gene3D G3DSA:2.70.98.10 42 372 3.7E-215 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 Gene3D G3DSA:3.30.2080.10 319 809 3.7E-215 T 11-10-2018 AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 36 546 8.0E-110 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 Gene3D G3DSA:1.20.1610.10 478 684 3.7E-215 T 11-10-2018 AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 SUPERFAMILY SSF48208 284 792 9.07E-40 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 Gene3D G3DSA:1.20.1050.60 373 477 3.7E-215 T 11-10-2018 AL538_17775 609dfaf9eb434205a269e72280c1ac7d 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 6.3E-144 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL538_12905 d9d26df99a478cac287201a3711d8f2f 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AL538_12905 d9d26df99a478cac287201a3711d8f2f 315 Pfam PF00691 OmpA family 196 294 1.4E-17 T 11-10-2018 IPR006665 OmpA-like domain AL538_12905 d9d26df99a478cac287201a3711d8f2f 315 SUPERFAMILY SSF103088 183 300 3.4E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_12905 d9d26df99a478cac287201a3711d8f2f 315 Gene3D G3DSA:3.30.1330.60 154 302 1.7E-53 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 Gene3D G3DSA:1.10.443.10 98 310 2.4E-69 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 Pfam PF00589 Phage integrase family 105 305 2.5E-45 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 86 1.3E-22 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 Gene3D G3DSA:1.10.150.130 1 94 1.5E-28 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 SUPERFAMILY SSF56349 101 315 3.24E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_02930 18ca8570f60ba3f19a5bb2cca0de58b0 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 2.1E-151 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 AL538_10890 ea556bcdd8ce79a533e221010cf20bb0 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10890 ea556bcdd8ce79a533e221010cf20bb0 101 SUPERFAMILY SSF57716 2 101 9.27E-37 T 11-10-2018 AL538_10890 ea556bcdd8ce79a533e221010cf20bb0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10890 ea556bcdd8ce79a533e221010cf20bb0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.682 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AL538_10890 ea556bcdd8ce79a533e221010cf20bb0 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 11-10-2018 AL538_24910 9317d57a1bde27a9a14b6d8f1b141c0e 264 Pfam PF13672 Protein phosphatase 2C 20 211 2.2E-19 T 11-10-2018 AL538_24910 9317d57a1bde27a9a14b6d8f1b141c0e 264 SMART SM00332 1 235 2.1E-17 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_24910 9317d57a1bde27a9a14b6d8f1b141c0e 264 Gene3D G3DSA:3.60.40.10 2 240 4.3E-59 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_24910 9317d57a1bde27a9a14b6d8f1b141c0e 264 SUPERFAMILY SSF81606 8 237 3.4E-61 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_24910 9317d57a1bde27a9a14b6d8f1b141c0e 264 SMART SM00331 11 237 1.3E-21 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_22340 519405abb2a29eb2657ab35e38d40982 374 Gene3D G3DSA:3.20.20.120 120 373 6.4E-58 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_22340 519405abb2a29eb2657ab35e38d40982 374 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 37 126 4.7E-13 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL538_22340 519405abb2a29eb2657ab35e38d40982 374 Gene3D G3DSA:3.30.390.10 1 118 1.3E-24 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL538_22340 519405abb2a29eb2657ab35e38d40982 374 Pfam PF13378 Enolase C-terminal domain-like 156 361 2.0E-36 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AL538_22340 519405abb2a29eb2657ab35e38d40982 374 SUPERFAMILY SSF51604 114 368 4.22E-47 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_22340 519405abb2a29eb2657ab35e38d40982 374 SUPERFAMILY SSF54826 1 126 6.73E-20 T 11-10-2018 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 PIRSF PIRSF006092 1 158 1.2E-46 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Gene3D G3DSA:1.10.287.180 1 76 5.1E-32 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Gene3D G3DSA:3.10.50.30 77 159 2.2E-31 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 SUPERFAMILY SSF46557 3 78 7.32E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 SUPERFAMILY SSF54534 80 157 3.14E-19 T 11-10-2018 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.5E-26 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 54.143 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.089 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.1E-76 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AL538_10350 d41f123048c1875a4bd444a65a966cd2 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.6E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 PIRSF PIRSF001223 1 100 3.0E-47 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 SUPERFAMILY SSF54111 1 99 4.05E-44 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-40 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 Pfam PF00547 Urease, gamma subunit 1 99 9.1E-46 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 8.9E-50 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.863 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19205 d9045d013292eb14f51b72dae91d5f8b 100 Gene3D G3DSA:3.30.280.10 1 100 1.1E-45 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PIRSF PIRSF001480 18 410 5.1E-101 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 Gene3D G3DSA:2.60.120.10 322 403 6.5E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 5.0E-69 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 Pfam PF01238 Phosphomannose isomerase type I 23 379 2.9E-87 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 SUPERFAMILY SSF51182 19 395 3.2E-104 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_22000 1a66628289219c51ec9d400cec78fc52 410 Gene3D G3DSA:1.10.441.10 169 321 6.5E-129 T 11-10-2018 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 403 2.2E-88 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_22000 1a66628289219c51ec9d400cec78fc52 410 Gene3D G3DSA:2.60.120.10 26 296 6.5E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 SUPERFAMILY SSF51735 42 150 2.21E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 51.749 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 5.1E-97 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 80 5.0E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.2E-25 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_24200 bbc6e4adf15dd96dd3f8023b56f58c57 399 Gene3D G3DSA:3.40.50.720 1 397 5.1E-165 T 11-10-2018 AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 Gene3D G3DSA:3.30.70.20 96 158 1.3E-9 T 11-10-2018 AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 17 154 3.0E-42 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.939 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 1.1E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 Pfam PF13187 4Fe-4S dicluster domain 34 79 3.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 SUPERFAMILY SSF54862 31 158 1.0E-17 T 11-10-2018 AL538_22680 883b11e69c36562f81ff62b94c2ab83b 161 Gene3D G3DSA:3.30.70.20 29 82 1.8E-10 T 11-10-2018 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 SMART SM00342 182 264 4.3E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 2.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 2.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 SUPERFAMILY SSF46689 167 215 2.33E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 Pfam PF02311 AraC-like ligand binding domain 15 133 2.6E-20 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 Gene3D G3DSA:1.10.10.60 166 265 2.2E-26 T 11-10-2018 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 SUPERFAMILY SSF46689 218 263 1.21E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 SUPERFAMILY SSF51215 23 133 7.45E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_09255 fd4e2685f10590e4dab204e6fb0716ec 265 Pfam PF12833 Helix-turn-helix domain 192 264 1.5E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SMART SM00387 418 537 9.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SUPERFAMILY SSF55874 419 534 2.49E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 7.4E-9 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Gene3D G3DSA:3.30.450.20 35 164 1.6E-40 T 11-10-2018 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SUPERFAMILY SSF55890 322 390 1.44E-9 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SMART SM00091 213 279 8.0E-5 T 11-10-2018 IPR000014 PAS domain AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SUPERFAMILY SSF103190 40 168 1.88E-35 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Gene3D G3DSA:3.30.565.10 382 539 5.7E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Pfam PF00989 PAS fold 215 281 6.0E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Pfam PF17203 Single cache domain 3 36 167 8.1E-20 T 11-10-2018 IPR033463 Single cache domain 3 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Gene3D G3DSA:3.30.450.20 199 310 4.8E-22 T 11-10-2018 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 536 3.0E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 2.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01215 109e58f32a9794a2112b34c7aa8091b6 539 SUPERFAMILY SSF55785 215 306 3.66E-10 T 11-10-2018 IPR035965 PAS domain superfamily AL538_22805 5b684e5dddd17d4ee11cf16831055a17 387 Pfam PF12821 Threonine/Serine exporter, ThrE 257 377 3.8E-7 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE AL538_22805 5b684e5dddd17d4ee11cf16831055a17 387 Pfam PF06738 Putative threonine/serine exporter 95 230 2.6E-14 T 11-10-2018 IPR010619 Putative threonine/serine exporter AL538_01250 64258f9dbecb1abc7d98fbb99bef24d4 573 Pfam PF07510 Protein of unknown function (DUF1524) 428 562 2.5E-24 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AL538_01250 64258f9dbecb1abc7d98fbb99bef24d4 573 Pfam PF03235 Protein of unknown function DUF262 16 242 7.1E-36 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 3.5E-102 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 5.2E-28 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 231 9.9E-6 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 Gene3D G3DSA:1.10.287.1080 132 264 4.0E-44 T 11-10-2018 AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 SUPERFAMILY SSF101386 3 105 5.52E-25 T 11-10-2018 AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 Gene3D G3DSA:1.10.287.1080 2 126 2.8E-45 T 11-10-2018 AL538_06755 cba60a48d9463a6b9c5ee41fe7c194c0 265 SUPERFAMILY SSF101386 138 239 6.73E-23 T 11-10-2018 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 157 5.4E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 Pfam PF08281 Sigma-70, region 4 109 154 2.2E-9 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 Gene3D G3DSA:1.10.1740.10 1 75 1.1E-16 T 11-10-2018 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 SUPERFAMILY SSF88659 98 160 1.14E-9 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 SUPERFAMILY SSF88946 6 90 7.46E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 Gene3D G3DSA:1.10.10.10 76 162 3.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 Pfam PF04542 Sigma-70 region 2 11 76 6.4E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_26480 42d4d3977e3841c3bb2757ef6c2068c7 186 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 10 179 2.8E-56 T 11-10-2018 IPR014304 RNA polymerase sigma-Z type AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 SMART SM00387 351 463 9.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 SUPERFAMILY SSF55874 311 461 6.02E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 SUPERFAMILY SSF47384 236 308 3.92E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 3.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 1.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 SMART SM00388 246 312 1.9E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 Gene3D G3DSA:3.30.565.10 311 463 6.5E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_17185 65e81362a62e32cc07e0460eb7bbae52 464 Gene3D G3DSA:1.10.287.130 232 310 4.5E-15 T 11-10-2018 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SMART SM00448 3 115 2.9E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SMART SM00448 124 238 1.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Gene3D G3DSA:3.40.50.2300 120 251 7.5E-31 T 11-10-2018 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Gene3D G3DSA:3.40.50.2300 1 119 2.1E-17 T 11-10-2018 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Pfam PF00072 Response regulator receiver domain 5 104 3.9E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Pfam PF00072 Response regulator receiver domain 127 235 9.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 400 2.3E-30 T 11-10-2018 IPR000160 GGDEF domain AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SMART SM00267 244 404 3.4E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SUPERFAMILY SSF55073 260 402 1.33E-33 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SUPERFAMILY SSF52172 4 122 2.56E-18 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 SUPERFAMILY SSF52172 123 259 1.28E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 Gene3D G3DSA:3.30.70.270 252 404 8.4E-38 T 11-10-2018 AL538_05630 f007b41e26a8de85d720aca6eaf5d9ab 404 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 2.2E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 PIRSF PIRSF001413 1 396 4.9E-168 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.952 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.0E-194 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 SUPERFAMILY SSF53686 5 387 3.4E-141 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 9 204 2.3E-183 T 11-10-2018 AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 Gene3D G3DSA:3.40.50.1100 53 383 2.3E-183 T 11-10-2018 AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.3E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_03390 f605f2cf2511f2f79766c488f57ecfaa 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Gene3D G3DSA:3.30.450.20 144 259 6.6E-6 T 11-10-2018 AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Gene3D G3DSA:3.30.450.20 264 407 3.1E-23 T 11-10-2018 AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Pfam PF08448 PAS fold 285 395 1.6E-14 T 11-10-2018 IPR013656 PAS fold-4 AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 572 4.4E-48 T 11-10-2018 IPR000160 GGDEF domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SMART SM00267 401 577 3.1E-58 T 11-10-2018 IPR000160 GGDEF domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.1E-47 T 11-10-2018 IPR000160 GGDEF domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 1.0E-12 T 11-10-2018 IPR000014 PAS domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Pfam PF13188 PAS domain 40 78 0.014 T 11-10-2018 IPR000014 PAS domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 Gene3D G3DSA:3.30.70.270 414 579 3.6E-50 T 11-10-2018 AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SUPERFAMILY SSF55785 266 392 1.33E-17 T 11-10-2018 IPR035965 PAS domain superfamily AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SUPERFAMILY SSF55073 417 577 5.65E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SMART SM00091 38 104 110.0 T 11-10-2018 IPR000014 PAS domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SMART SM00091 279 346 0.004 T 11-10-2018 IPR000014 PAS domain AL538_11770 fd04c6aa9447717a755c1d825359f298 581 SMART SM00091 158 227 290.0 T 11-10-2018 IPR000014 PAS domain AL538_02185 a93a4ea6718c2f7868f16fce267f7d4e 227 SUPERFAMILY SSF103039 10 173 2.88E-23 T 11-10-2018 IPR028976 CheC-like superfamily AL538_02185 a93a4ea6718c2f7868f16fce267f7d4e 227 Gene3D G3DSA:3.40.1550.10 7 173 1.2E-19 T 11-10-2018 IPR028976 CheC-like superfamily AL538_02185 a93a4ea6718c2f7868f16fce267f7d4e 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 2.1E-117 T 11-10-2018 IPR024513 Protein of unknown function DUF3334 AL538_07275 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AL538_07275 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Gene3D G3DSA:3.30.70.970 1 131 6.3E-59 T 11-10-2018 IPR036701 RraB-like superfamily AL538_07275 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 PIRSF PIRSF018193 8 138 1.5E-58 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B AL538_07275 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 SUPERFAMILY SSF89946 8 126 3.14E-39 T 11-10-2018 IPR036701 RraB-like superfamily AL538_07275 395204d9c8e6c3ab3a1a3d1acd38d0c0 138 Pfam PF06877 Regulator of ribonuclease activity B 18 120 3.0E-34 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 9 244 3.7E-85 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 218 2.2E-49 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 Gene3D G3DSA:3.40.1010.10 8 124 5.6E-39 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 SUPERFAMILY SSF53790 4 252 5.89E-76 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL538_20145 6bf142a2aae3bef0ebbb3ea62719d9e2 263 Gene3D G3DSA:3.30.950.10 125 262 3.7E-46 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 SUPERFAMILY SSF52172 2 177 2.28E-40 T 11-10-2018 IPR011006 CheY-like superfamily AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Pfam PF00158 Sigma-54 interaction domain 134 299 2.9E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Gene3D G3DSA:1.10.10.60 398 442 1.8E-9 T 11-10-2018 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 SMART SM00448 1 108 6.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 SMART SM00382 153 296 5.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-31 T 11-10-2018 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Gene3D G3DSA:3.40.50.300 124 304 1.9E-65 T 11-10-2018 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Pfam PF00072 Response regulator receiver domain 2 108 5.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 SUPERFAMILY SSF46689 346 443 2.69E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 SUPERFAMILY SSF52540 133 376 2.66E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Pfam PF02954 Bacterial regulatory protein, Fis family 404 444 1.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_04125 436ef34fca7ec1c898a0ddcdfe704aae 453 Gene3D G3DSA:1.10.8.60 305 384 4.1E-24 T 11-10-2018 AL538_25310 167d380eda5d68f7c6aac04780a18e3f 158 Pfam PF04314 Copper chaperone PCu(A)C 33 141 7.7E-38 T 11-10-2018 IPR007410 Copper chaperone PCuAC AL538_25310 167d380eda5d68f7c6aac04780a18e3f 158 Gene3D G3DSA:2.60.40.1890 37 151 1.4E-37 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_25310 167d380eda5d68f7c6aac04780a18e3f 158 SUPERFAMILY SSF110087 7 148 1.24E-48 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 Pfam PF00563 EAL domain 526 759 2.2E-67 T 11-10-2018 IPR001633 EAL domain AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 SUPERFAMILY SSF141868 524 771 5.75E-84 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 SUPERFAMILY SSF55073 353 511 8.63E-53 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 506 5.5E-45 T 11-10-2018 IPR000160 GGDEF domain AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 SMART SM00267 337 509 1.2E-60 T 11-10-2018 IPR000160 GGDEF domain AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 348 504 3.3E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 SMART SM00052 519 764 4.9E-104 T 11-10-2018 IPR001633 EAL domain AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 Gene3D G3DSA:3.20.20.450 522 773 5.1E-94 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21495 e361736f51b6429f51d80c373c4ebd63 775 Gene3D G3DSA:3.30.70.270 342 521 2.0E-59 T 11-10-2018 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 Pfam PF08402 TOBE domain 273 345 5.1E-12 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 Gene3D G3DSA:2.40.50.940 223 346 5.6E-30 T 11-10-2018 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 Gene3D G3DSA:3.40.50.300 4 222 6.7E-65 T 11-10-2018 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 Pfam PF00005 ABC transporter 21 162 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 Gene3D G3DSA:2.40.50.140 280 337 5.6E-30 T 11-10-2018 AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 SMART SM00382 29 212 5.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 SUPERFAMILY SSF52540 4 243 4.64E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26890 8cc724093e16ec9e83fd07bf85b1dffc 385 SUPERFAMILY SSF50331 237 353 5.83E-27 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 8.0E-15 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 SUPERFAMILY SSF46977 425 524 2.62E-32 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 Gene3D G3DSA:1.20.58.100 425 535 7.5E-45 T 11-10-2018 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 SUPERFAMILY SSF56425 238 353 2.99E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 Gene3D G3DSA:3.50.50.60 10 404 5.8E-154 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.2E-211 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 PIRSF PIRSF000171 336 532 1.8E-14 T 11-10-2018 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 PIRSF PIRSF000171 1 266 3.7E-28 T 11-10-2018 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 Pfam PF00890 FAD binding domain 10 392 9.1E-101 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 Gene3D G3DSA:3.90.700.10 248 358 5.8E-154 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 SUPERFAMILY SSF51905 5 447 2.85E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.6E-9 T 11-10-2018 AL538_06830 5befd1600eaf883151000f9ecbefd5d7 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.6E-9 T 11-10-2018 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 Gene3D G3DSA:1.10.601.10 53 140 1.1E-37 T 11-10-2018 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 260 286 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PIRSF PIRSF000770 11 293 6.7E-36 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 92 105 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 Pfam PF04545 Sigma-70, region 4 237 288 2.1E-9 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PRINTS PR00046 Major sigma-70 factor signature 116 124 1.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PRINTS PR00046 Major sigma-70 factor signature 239 251 1.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PRINTS PR00046 Major sigma-70 factor signature 275 286 1.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PRINTS PR00046 Major sigma-70 factor signature 260 275 1.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 PRINTS PR00046 Major sigma-70 factor signature 92 105 1.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 290 1.4E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 SUPERFAMILY SSF88946 24 138 4.71E-39 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 Pfam PF04542 Sigma-70 region 2 65 132 2.2E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 Gene3D G3DSA:1.10.10.10 217 291 6.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 SUPERFAMILY SSF88659 199 291 1.55E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_22840 915ebe269eab4dbbda23e47424742fa2 296 Pfam PF00140 Sigma-70 factor, region 1.2 27 60 1.4E-7 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_10565 f354b142c686c3c1193edc2a8a2bfa90 255 Gene3D G3DSA:3.90.550.10 2 216 1.2E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10565 f354b142c686c3c1193edc2a8a2bfa90 255 SUPERFAMILY SSF53448 3 149 2.25E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10565 f354b142c686c3c1193edc2a8a2bfa90 255 Pfam PF00535 Glycosyl transferase family 2 8 106 9.9E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_06305 9fb4c90f9f9510cdf97f01dacf140777 328 Gene3D G3DSA:1.10.3720.10 87 327 9.6E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06305 9fb4c90f9f9510cdf97f01dacf140777 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 5.4E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_06305 9fb4c90f9f9510cdf97f01dacf140777 328 SUPERFAMILY SSF161098 93 324 1.74E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL538_02245 d0ba38750487a6910d22308ca2061a91 83 Pfam PF10387 Protein of unknown function (DUF2442) 6 79 6.1E-10 T 11-10-2018 IPR018841 Protein of unknown function DUF2442 AL538_02245 d0ba38750487a6910d22308ca2061a91 83 SUPERFAMILY SSF143880 4 67 7.19E-8 T 11-10-2018 IPR036782 NE0471-like, N-terminal AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 SUPERFAMILY SSF46689 235 284 3.23E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 SMART SM00342 199 282 1.4E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 Pfam PF12833 Helix-turn-helix domain 205 284 1.6E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 3.5E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 3.5E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_18605 deb2fc8167c58af5a4a7962fb3c8023e 288 Gene3D G3DSA:1.10.10.60 179 288 1.2E-26 T 11-10-2018 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 Gene3D G3DSA:3.40.50.620 13 332 2.9E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 Gene3D G3DSA:1.10.240.10 191 305 2.9E-98 T 11-10-2018 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 SUPERFAMILY SSF52374 12 337 2.73E-74 T 11-10-2018 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 Pfam PF00579 tRNA synthetases class I (W and Y) 10 292 1.5E-53 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 4.0E-69 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.0E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 2.0E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 2.0E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_15585 9853a0ae89a3e920a7a112c6745f6bc3 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 2.0E-22 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AL538_20530 28a1287f3180634b457f80e009c20f09 307 SUPERFAMILY SSF53807 20 296 9.32E-64 T 11-10-2018 AL538_20530 28a1287f3180634b457f80e009c20f09 307 Gene3D G3DSA:3.40.50.1980 30 178 6.4E-33 T 11-10-2018 AL538_20530 28a1287f3180634b457f80e009c20f09 307 Gene3D G3DSA:3.40.50.1980 190 296 3.4E-20 T 11-10-2018 AL538_20530 28a1287f3180634b457f80e009c20f09 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 293 2.0E-46 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00690 Adhesin family signature 58 71 1.3E-7 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00690 Adhesin family signature 238 256 1.3E-7 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00690 Adhesin family signature 185 206 1.3E-7 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00690 Adhesin family signature 71 88 1.3E-7 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00691 Adhesin B signature 52 70 4.5E-9 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00691 Adhesin B signature 127 146 4.5E-9 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00691 Adhesin B signature 234 251 4.5E-9 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00691 Adhesin B signature 71 90 4.5E-9 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_20530 28a1287f3180634b457f80e009c20f09 307 PRINTS PR00691 Adhesin B signature 27 48 4.5E-9 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_25680 62be3c2a1c8bcd53045c4e0e814e91e2 251 SUPERFAMILY SSF52540 2 227 1.61E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25680 62be3c2a1c8bcd53045c4e0e814e91e2 251 Gene3D G3DSA:3.40.50.300 1 249 2.0E-61 T 11-10-2018 AL538_25680 62be3c2a1c8bcd53045c4e0e814e91e2 251 Pfam PF00005 ABC transporter 19 164 2.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25680 62be3c2a1c8bcd53045c4e0e814e91e2 251 SMART SM00382 26 213 5.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25680 62be3c2a1c8bcd53045c4e0e814e91e2 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_23205 e6e2b052862339aaecaceb1f8fdde9a6 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 267 1.2E-20 T 11-10-2018 AL538_23205 e6e2b052862339aaecaceb1f8fdde9a6 326 Gene3D G3DSA:3.40.50.1000 121 321 1.3E-43 T 11-10-2018 IPR023214 HAD superfamily AL538_23205 e6e2b052862339aaecaceb1f8fdde9a6 326 SUPERFAMILY SSF56784 61 308 6.31E-25 T 11-10-2018 IPR036412 HAD-like superfamily AL538_12455 131d23fe773bc6afad8ecc75548cc985 507 Pfam PF03553 Na+/H+ antiporter family 161 469 5.9E-50 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 SUPERFAMILY SSF51366 4 218 1.67E-78 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 Gene3D G3DSA:3.20.20.70 5 221 4.8E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.4E-92 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.7E-100 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_07740 2465102902a1f9b6649cdab04033a5d2 223 PIRSF PIRSF001461 1 223 5.6E-107 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 567 7.3E-286 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 SUPERFAMILY SSF51338 422 477 1.4E-5 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 Gene3D G3DSA:2.30.40.10 3 480 1.0E-292 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 2.8E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 2.8E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 2.8E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 2.8E-34 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 Pfam PF01979 Amidohydrolase family 124 455 7.1E-74 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 6.3E-56 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 Hamap MF_01953 Urease subunit alpha [ureC]. 1 567 55.352 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 SUPERFAMILY SSF51556 129 567 4.95E-192 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_19195 19a4ac61ca39826677662a1b886b7286 567 Gene3D G3DSA:3.20.20.140 128 567 1.0E-292 T 11-10-2018 AL538_19195 19a4ac61ca39826677662a1b886b7286 567 SUPERFAMILY SSF51338 2 176 9.12E-61 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_24040 05263ee12937be68fcb32db4e5958a8d 198 PIRSF PIRSF011489 1 196 1.2E-80 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL538_24040 05263ee12937be68fcb32db4e5958a8d 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 7.0E-29 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AL538_11020 772c6c18ed4eafbadb34bc1271f64c77 205 Pfam PF01583 Adenylylsulphate kinase 31 185 5.5E-70 T 11-10-2018 AL538_11020 772c6c18ed4eafbadb34bc1271f64c77 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 193 6.7E-80 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL538_11020 772c6c18ed4eafbadb34bc1271f64c77 205 SUPERFAMILY SSF52540 25 195 1.25E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11020 772c6c18ed4eafbadb34bc1271f64c77 205 Gene3D G3DSA:3.40.50.300 9 205 7.0E-77 T 11-10-2018 AL538_11020 772c6c18ed4eafbadb34bc1271f64c77 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.19 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 SUPERFAMILY SSF88946 13 100 3.53E-12 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 SUPERFAMILY SSF88659 87 163 2.18E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 Pfam PF04542 Sigma-70 region 2 15 80 6.7E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 161 1.1E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 Gene3D G3DSA:1.10.10.10 94 167 4.4E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 Gene3D G3DSA:1.10.1740.10 1 77 8.8E-7 T 11-10-2018 AL538_19480 75bcaea176cd0b4547f2b7cfa5dcc7c5 172 Pfam PF08281 Sigma-70, region 4 111 161 1.4E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_06035 9485141460a7c97b491945c640b48821 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.5E-289 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_06035 9485141460a7c97b491945c640b48821 696 SUPERFAMILY SSF54211 477 596 1.14E-38 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_06035 9485141460a7c97b491945c640b48821 696 Gene3D G3DSA:3.30.230.10 482 685 1.4E-82 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_06035 9485141460a7c97b491945c640b48821 696 SUPERFAMILY SSF54980 601 690 1.76E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_06035 9485141460a7c97b491945c640b48821 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 Gene3D G3DSA:3.30.70.240 602 672 1.4E-82 T 11-10-2018 AL538_06035 9485141460a7c97b491945c640b48821 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.7E-29 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_06035 9485141460a7c97b491945c640b48821 696 SUPERFAMILY SSF54980 402 479 8.63E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_06035 9485141460a7c97b491945c640b48821 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 Gene3D G3DSA:3.40.50.300 1 291 6.5E-100 T 11-10-2018 AL538_06035 9485141460a7c97b491945c640b48821 696 SMART SM00838 598 685 3.7E-47 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AL538_06035 9485141460a7c97b491945c640b48821 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 101.884 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_06035 9485141460a7c97b491945c640b48821 696 SMART SM00889 478 596 1.3E-59 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 9.7E-60 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_06035 9485141460a7c97b491945c640b48821 696 SUPERFAMILY SSF52540 3 279 2.9E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06035 9485141460a7c97b491945c640b48821 696 Pfam PF03764 Elongation factor G, domain IV 477 595 4.0E-42 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AL538_06035 9485141460a7c97b491945c640b48821 696 Pfam PF14492 Elongation Factor G, domain II 402 475 6.5E-29 T 11-10-2018 AL538_06035 9485141460a7c97b491945c640b48821 696 SUPERFAMILY SSF50447 262 400 1.48E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06035 9485141460a7c97b491945c640b48821 696 Gene3D G3DSA:2.40.30.10 292 414 4.3E-44 T 11-10-2018 AL538_06035 9485141460a7c97b491945c640b48821 696 Gene3D G3DSA:3.30.70.870 431 481 6.2E-21 T 11-10-2018 AL538_06035 9485141460a7c97b491945c640b48821 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 7.5E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 SUPERFAMILY SSF56784 12 273 1.9E-66 T 11-10-2018 IPR036412 HAD-like superfamily AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 2.4E-60 T 11-10-2018 IPR000150 Cof family GO:0016787 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 3.3E-67 T 11-10-2018 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 11-10-2018 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 11-10-2018 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 2.2E-34 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 Gene3D G3DSA:3.40.50.1000 14 265 2.6E-75 T 11-10-2018 IPR023214 HAD superfamily AL538_09080 042242e7d431ebf655ca3d9dfe0731a9 274 Gene3D G3DSA:3.30.1240.10 91 195 2.6E-75 T 11-10-2018 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 Pfam PF07690 Major Facilitator Superfamily 36 396 7.3E-51 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 4.7E-141 T 11-10-2018 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 Gene3D G3DSA:1.20.1250.20 238 438 1.8E-44 T 11-10-2018 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 Gene3D G3DSA:1.20.1250.20 19 223 4.7E-52 T 11-10-2018 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AL538_24505 b99fb8dddccd50395057ab88232c5764 446 SUPERFAMILY SSF103473 14 431 6.54E-81 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_24505 b99fb8dddccd50395057ab88232c5764 446 PIRSF PIRSF002808 7 443 1.7E-142 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.8E-19 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 Gene3D G3DSA:3.40.50.2300 372 476 2.9E-36 T 11-10-2018 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 2.2E-169 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.2E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 6.8E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 SUPERFAMILY SSF52794 385 472 2.75E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 SUPERFAMILY SSF55804 506 645 2.88E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_11340 93f46bc449b48f4e4c1ed63f7afef996 650 Gene3D G3DSA:3.40.930.10 502 647 6.4E-51 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_04085 3218f29594b07491b3badd4095195b73 543 Gene3D G3DSA:3.40.190.10 42 524 9.0E-193 T 11-10-2018 AL538_04085 3218f29594b07491b3badd4095195b73 543 Gene3D G3DSA:3.90.76.10 72 195 9.0E-193 T 11-10-2018 AL538_04085 3218f29594b07491b3badd4095195b73 543 PIRSF PIRSF002741 1 543 4.5E-116 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_04085 3218f29594b07491b3badd4095195b73 543 Gene3D G3DSA:3.10.105.10 297 512 9.0E-193 T 11-10-2018 AL538_04085 3218f29594b07491b3badd4095195b73 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL538_04085 3218f29594b07491b3badd4095195b73 543 SUPERFAMILY SSF53850 35 530 2.17E-148 T 11-10-2018 AL538_04085 3218f29594b07491b3badd4095195b73 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 462 1.6E-92 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 SUPERFAMILY SSF51735 419 561 2.78E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 1.2E-74 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 Pfam PF02254 TrkA-N domain 422 534 9.0E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 Gene3D G3DSA:1.20.1530.20 2 399 3.2E-77 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 Gene3D G3DSA:3.40.50.720 419 579 5.9E-36 T 11-10-2018 AL538_26445 5723b61a3262e1cdcf5d1493a1d3d207 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.1E-57 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 5 419 5.8E-173 T 11-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 Gene3D G3DSA:1.25.40.80 135 294 5.4E-48 T 11-10-2018 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 SUPERFAMILY SSF52425 3 188 1.7E-35 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 Pfam PF00875 DNA photolyase 7 164 2.7E-26 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 PRINTS PR00147 DNA photolyase signature 380 394 4.6E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 PRINTS PR00147 DNA photolyase signature 321 337 4.6E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 PRINTS PR00147 DNA photolyase signature 341 359 4.6E-11 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 6.4E-41 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 Gene3D G3DSA:3.40.50.620 4 134 8.6E-23 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_20745 262e7ea696da16632244eb8167a01a3b 450 SUPERFAMILY SSF48173 193 421 1.1E-71 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL538_20745 262e7ea696da16632244eb8167a01a3b 450 Gene3D G3DSA:1.10.579.10 297 438 4.4E-52 T 11-10-2018 AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 Gene3D G3DSA:1.10.10.10 5 94 2.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 Gene3D G3DSA:3.40.190.290 96 295 1.0E-18 T 11-10-2018 AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.7E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 SUPERFAMILY SSF46785 6 101 2.14E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 Pfam PF03466 LysR substrate binding domain 92 291 5.1E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18240 d8efd24c32d21d4af09e45beb783a017 297 SUPERFAMILY SSF53850 92 292 1.46E-22 T 11-10-2018 AL538_11225 a39274029901fea5fdb6aece09ff9fee 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.984 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL538_11225 a39274029901fea5fdb6aece09ff9fee 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.0E-98 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AL538_11225 a39274029901fea5fdb6aece09ff9fee 200 SUPERFAMILY SSF52016 1 195 5.49E-60 T 11-10-2018 AL538_11225 a39274029901fea5fdb6aece09ff9fee 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AL538_11225 a39274029901fea5fdb6aece09ff9fee 200 Gene3D G3DSA:3.20.19.10 1 180 5.9E-77 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 145 432 3.3E-78 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 Gene3D G3DSA:2.60.40.10 880 964 5.7E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 PIRSF PIRSF036597 1 972 0.0 T 11-10-2018 IPR012045 Peptidase M6, unassigned InhA-related AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 PIRSF PIRSF036597 964 1010 0.14 T 11-10-2018 IPR012045 Peptidase M6, unassigned InhA-related AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 SUPERFAMILY SSF55486 307 365 1.39E-6 T 11-10-2018 AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 ProSitePatterns PS00018 EF-hand calcium-binding domain. 244 256 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AL538_01165 3222223e9f8ca8c62128fc9e6571da99 1011 Pfam PF05547 Immune inhibitor A peptidase M6 152 383 2.4E-15 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL538_11125 6554533c5f59a2533729b25fdffefa0d 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.4E-70 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 AL538_11125 6554533c5f59a2533729b25fdffefa0d 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 727 2.8E-212 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AL538_11125 6554533c5f59a2533729b25fdffefa0d 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 670 7.0E-76 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_11265 5c175297d31d35719b9bd2de26bfccc4 602 Pfam PF00501 AMP-binding enzyme 13 466 5.0E-101 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_11265 5c175297d31d35719b9bd2de26bfccc4 602 Gene3D G3DSA:3.40.50.12780 319 459 3.1E-34 T 11-10-2018 AL538_11265 5c175297d31d35719b9bd2de26bfccc4 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_11265 5c175297d31d35719b9bd2de26bfccc4 602 SUPERFAMILY SSF56801 7 596 3.79E-115 T 11-10-2018 AL538_11265 5c175297d31d35719b9bd2de26bfccc4 602 Gene3D G3DSA:3.40.50.12780 2 318 1.5E-54 T 11-10-2018 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 4.1E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 4.1E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 4.1E-25 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 439 1.1E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 Gene3D G3DSA:1.10.287.950 149 476 2.2E-66 T 11-10-2018 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 SUPERFAMILY SSF58104 165 474 3.92E-66 T 11-10-2018 AL538_24035 1e1f67b45749da2d146d0df096d07af5 476 SMART SM00283 213 474 1.8E-51 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 Gene3D G3DSA:3.40.50.300 2 241 1.1E-72 T 11-10-2018 AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 SMART SM00382 28 231 7.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.8E-9 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.6E-126 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 Pfam PF00005 ABC transporter 20 166 4.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 SUPERFAMILY SSF52540 3 237 3.59E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07365 05262e04a5287db0a6733ebdc9e85199 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 1.9E-5 T 11-10-2018 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 1.9E-5 T 11-10-2018 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 1.9E-5 T 11-10-2018 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 54.247 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 Gene3D G3DSA:3.40.50.150 7 236 4.4E-59 T 11-10-2018 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 SUPERFAMILY SSF53335 33 189 1.27E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_11875 1fdde7115edd1880cb7fe84119e48f2b 239 Pfam PF05175 Methyltransferase small domain 42 129 4.7E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 Gene3D G3DSA:3.40.50.150 7 239 1.5E-83 T 11-10-2018 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 Gene3D G3DSA:1.10.1020.10 57 156 1.5E-83 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 8.1E-95 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 SUPERFAMILY SSF53335 5 268 9.55E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 6.4E-68 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AL538_07745 b0f2dffacd9c2ab72084f797d7dc8c3e 279 PIRSF PIRSF000398 1 274 3.2E-73 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Pfam PF02811 PHP domain 8 172 2.2E-41 T 11-10-2018 IPR004013 PHP domain GO:0003824 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Gene3D G3DSA:2.40.50.140 984 1072 2.2E-9 T 11-10-2018 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 SUPERFAMILY SSF89550 5 263 1.16E-11 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 5.6E-11 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.6E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 SMART SM00481 7 74 3.2E-23 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 SUPERFAMILY SSF50249 978 1064 9.35E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Gene3D G3DSA:3.20.20.140 1 270 2.2E-90 T 11-10-2018 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.3E-173 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05400 8bc58e5c8c96b61a9326045a0ce18fcc 1159 Gene3D G3DSA:1.10.10.1600 433 510 3.5E-32 T 11-10-2018 AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 Pfam PF00263 Bacterial type II and III secretion system protein 346 523 3.2E-39 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 5.6E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 365 5.6E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 270 280 5.6E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 5.6E-17 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 Pfam PF07655 Secretin N-terminal domain 145 241 6.0E-25 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 Gene3D G3DSA:3.55.50.30 49 146 7.1E-11 T 11-10-2018 AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 SMART SM00965 93 141 4.0E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL538_07535 ad25dd538f02287692d0196d7773fcd7 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 236 523 4.6E-90 T 11-10-2018 IPR013358 Pilus biogenesis, MshL AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.727 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 Gene3D G3DSA:1.20.120.1460 250 325 3.3E-22 T 11-10-2018 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 Gene3D G3DSA:3.20.20.70 4 245 8.9E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 SUPERFAMILY SSF51395 6 319 2.2E-74 T 11-10-2018 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 1.8E-161 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 PIRSF PIRSF006621 1 323 3.4E-76 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_07680 4a61b06acb25732bc70ab9c3e481905a 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 2.1E-94 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_23960 7c561370274e713b0dd81938963870c9 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 2.5E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_23960 7c561370274e713b0dd81938963870c9 306 Gene3D G3DSA:1.10.3720.10 68 303 7.1E-52 T 11-10-2018 IPR035906 MetI-like superfamily AL538_23960 7c561370274e713b0dd81938963870c9 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 6.9E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_23960 7c561370274e713b0dd81938963870c9 306 SUPERFAMILY SSF161098 72 293 1.57E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20310 12d7369709fc95c8162138c715b2dec3 461 SUPERFAMILY SSF111283 7 459 1.44E-112 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL538_20310 12d7369709fc95c8162138c715b2dec3 461 PIRSF PIRSF004919 1 461 3.8E-115 T 11-10-2018 IPR025502 TldD AL538_20310 12d7369709fc95c8162138c715b2dec3 461 Gene3D G3DSA:3.30.2290.10 3 221 3.1E-19 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL538_20310 12d7369709fc95c8162138c715b2dec3 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 2.3E-61 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 381 7.7E-94 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 Pfam PF07559 Flagellar basal body protein FlaE 173 280 1.2E-23 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 397 2.4E-17 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 Gene3D G3DSA:2.60.98.20 144 281 4.7E-35 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 SUPERFAMILY SSF117143 73 360 2.62E-80 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_21045 e906567ceb3f8c3e449bb12e9f069901 399 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_21450 4144109800b7ed4be64c8ed76d9dbb03 127 SUPERFAMILY SSF54593 1 126 2.55E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_21450 4144109800b7ed4be64c8ed76d9dbb03 127 Gene3D G3DSA:3.10.180.10 7 126 5.9E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_21450 4144109800b7ed4be64c8ed76d9dbb03 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 5.8E-20 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 SMART SM00448 1 118 1.2E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 SUPERFAMILY SSF141868 140 379 8.5E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 Gene3D G3DSA:3.40.50.2300 2 130 1.1E-20 T 11-10-2018 AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 Pfam PF00072 Response regulator receiver domain 3 117 2.3E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 SMART SM00052 134 375 8.4E-61 T 11-10-2018 IPR001633 EAL domain AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 SUPERFAMILY SSF52172 1 123 1.85E-18 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 Gene3D G3DSA:3.20.20.450 138 380 2.3E-69 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25845 bbd0b5b143df114f6e9884ef2258966b 380 Pfam PF00563 EAL domain 140 370 5.9E-59 T 11-10-2018 IPR001633 EAL domain AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.9E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 SUPERFAMILY SSF53850 98 314 9.15E-25 T 11-10-2018 AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 Gene3D G3DSA:1.10.10.10 1 90 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 Gene3D G3DSA:3.40.190.10 180 281 1.2E-27 T 11-10-2018 AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 Gene3D G3DSA:3.40.190.10 99 310 1.2E-27 T 11-10-2018 AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 Pfam PF03466 LysR substrate binding domain 101 312 7.2E-12 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18020 7aa26eb1cf4a130fcb00296235b92446 323 SUPERFAMILY SSF46785 6 85 5.44E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18845 21a80f47462c2adc6cf05c63ba2ec98b 441 Gene3D G3DSA:2.40.170.10 66 441 2.8E-73 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AL538_18845 21a80f47462c2adc6cf05c63ba2ec98b 441 SUPERFAMILY SSF56935 66 441 5.49E-94 T 11-10-2018 AL538_18845 21a80f47462c2adc6cf05c63ba2ec98b 441 Pfam PF02264 LamB porin 68 441 1.5E-77 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_18845 21a80f47462c2adc6cf05c63ba2ec98b 441 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 347 429 8.0E-4 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_18845 21a80f47462c2adc6cf05c63ba2ec98b 441 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 94 193 1.0E-45 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 Pfam PF00691 OmpA family 87 182 1.1E-20 T 11-10-2018 IPR006665 OmpA-like domain AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 Gene3D G3DSA:3.30.1330.60 67 187 1.7E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 ProSitePatterns PS00018 EF-hand calcium-binding domain. 45 57 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 SUPERFAMILY SSF103647 26 75 1.57E-8 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 SUPERFAMILY SSF103088 60 187 4.84E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 PRINTS PR01021 OMPA domain signature 118 133 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 PRINTS PR01021 OMPA domain signature 133 149 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_01005 394f939c0e6013b3828127ed0ce9fa06 208 PRINTS PR01021 OMPA domain signature 88 110 2.2E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_00195 3637526f9622fcb6142d7f150b64a173 509 Gene3D G3DSA:3.40.720.10 35 401 2.0E-98 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_00195 3637526f9622fcb6142d7f150b64a173 509 Pfam PF00884 Sulfatase 35 360 1.3E-60 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_00195 3637526f9622fcb6142d7f150b64a173 509 Pfam PF14707 C-terminal region of aryl-sulfatase 399 459 5.8E-8 T 11-10-2018 AL538_00195 3637526f9622fcb6142d7f150b64a173 509 Gene3D G3DSA:3.30.1120.10 402 459 2.0E-98 T 11-10-2018 AL538_00195 3637526f9622fcb6142d7f150b64a173 509 SUPERFAMILY SSF53649 31 503 1.15E-119 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 SUPERFAMILY SSF46785 25 105 2.18E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 Gene3D G3DSA:3.40.50.150 172 356 4.4E-109 T 11-10-2018 AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 SUPERFAMILY SSF53335 107 346 9.41E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 Gene3D G3DSA:1.10.10.10 7 104 5.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 PIRSF PIRSF005739 9 350 5.7E-5 T 11-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 Gene3D G3DSA:1.20.58.1390 107 321 4.4E-109 T 11-10-2018 AL538_14120 5d3bd7ed5e5212813b2924d1bea256bc 361 Pfam PF00891 O-methyltransferase 118 340 8.1E-12 T 11-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AL538_21080 c99efe3de1627ab381948a47743910ed 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 181 2.7E-55 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL538_21080 c99efe3de1627ab381948a47743910ed 299 Gene3D G3DSA:1.20.1330.10 161 274 2.2E-32 T 11-10-2018 AL538_21080 c99efe3de1627ab381948a47743910ed 299 Gene3D G3DSA:1.20.1330.10 37 160 1.8E-38 T 11-10-2018 AL538_21080 c99efe3de1627ab381948a47743910ed 299 SUPERFAMILY SSF64518 1 297 3.66E-55 T 11-10-2018 AL538_21080 c99efe3de1627ab381948a47743910ed 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.9E-14 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SMART SM00649 9 141 2.4E-82 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:3.30.1550.10 2 72 3.3E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.534 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.7E-64 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.0E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF54747 3 73 4.84E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 2.0E-14 T 11-10-2018 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AL538_08675 1fd1bdd1f016a744bb714c8f5c6c6de1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AL538_18455 712ba748bf5ffdf03eb652d7f21d7556 225 Pfam PF01144 Coenzyme A transferase 14 206 1.1E-38 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AL538_18455 712ba748bf5ffdf03eb652d7f21d7556 225 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 11 214 2.3E-90 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AL538_18455 712ba748bf5ffdf03eb652d7f21d7556 225 Gene3D G3DSA:3.40.1080.10 6 219 8.4E-91 T 11-10-2018 AL538_18455 712ba748bf5ffdf03eb652d7f21d7556 225 SUPERFAMILY SSF100950 10 223 1.23E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_18455 712ba748bf5ffdf03eb652d7f21d7556 225 SMART SM00882 12 207 2.2E-63 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AL538_22630 ef22070e12d5a212a5b186705d43e62b 206 PIRSF PIRSF006324 1 206 8.0E-44 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_22630 ef22070e12d5a212a5b186705d43e62b 206 Pfam PF01810 LysE type translocator 15 205 7.9E-25 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Gene3D G3DSA:3.40.50.300 196 382 4.6E-61 T 11-10-2018 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Gene3D G3DSA:1.10.10.60 475 543 4.5E-13 T 11-10-2018 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Pfam PF00158 Sigma-54 interaction domain 213 377 4.3E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Gene3D G3DSA:1.10.8.60 383 463 1.5E-20 T 11-10-2018 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Pfam PF02954 Bacterial regulatory protein, Fis family 501 539 7.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 505 522 3.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 522 542 3.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 SMART SM00382 231 378 7.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 SUPERFAMILY SSF55781 10 179 1.44E-14 T 11-10-2018 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 SUPERFAMILY SSF52540 214 450 3.08E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Pfam PF13185 GAF domain 26 148 2.6E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 Gene3D G3DSA:3.30.450.40 4 173 2.8E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_23310 e003b51e97f2cb7fbe3dbd57ab02379a 545 SUPERFAMILY SSF46689 490 542 5.73E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 3.4E-112 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 Gene3D G3DSA:1.10.230.10 229 327 2.1E-117 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.0E-160 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PIRSF PIRSF001369 7 380 1.5E-115 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 SUPERFAMILY SSF48256 14 380 1.03E-124 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 Gene3D G3DSA:1.10.580.10 36 360 2.1E-117 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 203 231 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 130 143 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 256 276 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 181 196 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 313 329 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_17025 179d117b3abdb69a1fa20b04e4b19bbe 380 PRINTS PR00143 Citrate synthase signature 333 347 5.7E-36 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 4.2E-95 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 3.1E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.76 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 Gene3D G3DSA:2.160.10.10 1 196 1.8E-50 T 11-10-2018 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 PIRSF PIRSF000456 4 262 9.3E-96 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 AL538_05415 3d6881c2cc82de63653afb48df84043f 262 SUPERFAMILY SSF51161 1 262 7.45E-74 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_04315 896c87121b5459f975345764b6c18013 156 Gene3D G3DSA:3.40.50.2300 1 136 4.6E-23 T 11-10-2018 AL538_04315 896c87121b5459f975345764b6c18013 156 SMART SM00226 2 129 3.6E-7 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_04315 896c87121b5459f975345764b6c18013 156 SUPERFAMILY SSF52788 2 131 1.03E-22 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL538_04315 896c87121b5459f975345764b6c18013 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 93 6.5E-12 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_20580 37e12e9cab0a4fd9fdd3c6fae46398bf 142 SUPERFAMILY SSF50630 6 140 4.15E-42 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_20580 37e12e9cab0a4fd9fdd3c6fae46398bf 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 2.6E-31 T 11-10-2018 AL538_20580 37e12e9cab0a4fd9fdd3c6fae46398bf 142 Gene3D G3DSA:2.40.70.10 3 133 1.8E-32 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_04645 7a709a23ceb17b22e6bc78388b5a536f 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 1.7E-29 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 Pfam PF00551 Formyl transferase 6 182 1.7E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.7E-29 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 Gene3D G3DSA:3.10.25.10 210 314 1.1E-37 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 SUPERFAMILY SSF50486 208 310 2.55E-33 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 37.025 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 9.1E-108 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 Gene3D G3DSA:3.40.50.170 1 209 4.5E-87 T 11-10-2018 AL538_09460 e45a59f27e93f06a600707e5a4df4502 315 SUPERFAMILY SSF53328 5 210 1.05E-65 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AL538_19045 7a9d88fa33b7647e1345df7f059a84c1 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.7E-36 T 11-10-2018 IPR007335 Protein of unknown function DUF413 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 Gene3D G3DSA:3.40.190.10 132 335 1.1E-106 T 11-10-2018 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 SUPERFAMILY SSF53850 26 340 3.22E-84 T 11-10-2018 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 PIRSF PIRSF019574 1 343 4.8E-109 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 Gene3D G3DSA:3.40.190.10 32 306 1.1E-106 T 11-10-2018 AL538_00695 b0b4abbb9c5a0a3b78eddd9aa41236e5 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 2.8E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 SUPERFAMILY SSF47616 76 208 5.03E-43 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 3.1E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 1.2E-35 T 11-10-2018 IPR007494 Glutaredoxin 2, C-terminal AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 Gene3D G3DSA:1.20.1050.10 89 209 4.6E-26 T 11-10-2018 AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 2.2E-82 T 11-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 Gene3D G3DSA:3.40.30.10 8 84 1.0E-22 T 11-10-2018 AL538_21845 f01e11e47cc45f8431bf2709b15bf835 209 SUPERFAMILY SSF52833 1 69 8.9E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 SUPERFAMILY SSF46785 4 84 1.04E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 Gene3D G3DSA:3.40.190.10 91 292 6.1E-63 T 11-10-2018 AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 Gene3D G3DSA:3.40.190.10 164 265 6.1E-63 T 11-10-2018 AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 SUPERFAMILY SSF53850 90 297 1.18E-46 T 11-10-2018 AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 Gene3D G3DSA:1.10.10.10 3 89 2.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 Pfam PF03466 LysR substrate binding domain 89 294 1.2E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_17850 3f365cea25ff9dc8e7a07467b95bac62 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Gene3D G3DSA:2.60.40.1250 34 169 6.7E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 219 419 5.4E-18 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Gene3D G3DSA:3.40.30.10 484 611 4.5E-35 T 11-10-2018 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 611 38.63 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 SUPERFAMILY SSF74863 39 152 3.92E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Pfam PF13899 Thioredoxin-like 501 582 1.1E-14 T 11-10-2018 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 SUPERFAMILY SSF52833 493 609 2.28E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 ProSitePatterns PS00194 Thioredoxin family active site. 520 538 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_08405 a46d2dc6f695e44efbf3967a8523cfb7 611 Pfam PF11412 Disulphide bond corrector protein DsbC 41 150 8.2E-29 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL538_01885 e4f05cf1bd03907b1d57b8f2aafcf82a 257 SUPERFAMILY SSF81301 16 128 1.64E-9 T 11-10-2018 AL538_01885 e4f05cf1bd03907b1d57b8f2aafcf82a 257 Gene3D G3DSA:3.30.460.10 19 121 1.8E-6 T 11-10-2018 AL538_01885 e4f05cf1bd03907b1d57b8f2aafcf82a 257 Pfam PF01909 Nucleotidyltransferase domain 44 96 1.6E-4 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL538_25195 6ac5b8c3f5f57dfa2d1c2f0ffe6c9a13 321 Gene3D G3DSA:1.10.3720.10 104 307 8.2E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25195 6ac5b8c3f5f57dfa2d1c2f0ffe6c9a13 321 SUPERFAMILY SSF161098 105 302 3.79E-25 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25195 6ac5b8c3f5f57dfa2d1c2f0ffe6c9a13 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 299 4.2E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_07800 40a32a906d33969134e41f8521e9261b 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL538_07800 40a32a906d33969134e41f8521e9261b 242 Gene3D G3DSA:3.40.30.10 171 242 5.3E-23 T 11-10-2018 AL538_07800 40a32a906d33969134e41f8521e9261b 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 AL538_07800 40a32a906d33969134e41f8521e9261b 242 SUPERFAMILY SSF52833 2 241 2.99E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_07800 40a32a906d33969134e41f8521e9261b 242 Pfam PF08534 Redoxin 5 159 1.5E-31 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_07800 40a32a906d33969134e41f8521e9261b 242 Gene3D G3DSA:3.40.30.10 4 165 2.2E-61 T 11-10-2018 AL538_07800 40a32a906d33969134e41f8521e9261b 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.6E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_07800 40a32a906d33969134e41f8521e9261b 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.6E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_07800 40a32a906d33969134e41f8521e9261b 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.6E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_07800 40a32a906d33969134e41f8521e9261b 242 Pfam PF00462 Glutaredoxin 173 231 1.8E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_00760 f8e7d42bb565cb8269340a023c6e90ef 158 Pfam PF05751 FixH 7 147 2.8E-43 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH AL538_01030 d792f0f8868a611d15f72deded78217d 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 6.4E-13 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_01030 d792f0f8868a611d15f72deded78217d 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 94 108 0.21 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_01030 d792f0f8868a611d15f72deded78217d 204 Pfam PF12464 Maltose acetyltransferase 9 57 6.7E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_01030 d792f0f8868a611d15f72deded78217d 204 Gene3D G3DSA:2.160.10.10 1 201 3.1E-69 T 11-10-2018 AL538_01030 d792f0f8868a611d15f72deded78217d 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_01030 d792f0f8868a611d15f72deded78217d 204 SUPERFAMILY SSF51161 8 195 1.01E-55 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_01030 d792f0f8868a611d15f72deded78217d 204 SMART SM01266 3 58 6.0E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Gene3D G3DSA:3.30.479.20 145 260 1.3E-39 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 75.051 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 11-10-2018 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.7E-103 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 SUPERFAMILY SSF54713 56 138 6.38E-18 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Pfam PF00889 Elongation factor TS 71 261 2.0E-60 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 SUPERFAMILY SSF54713 142 279 4.97E-45 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Gene3D G3DSA:3.30.479.20 57 140 2.5E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AL538_05470 efead1f195c25e79ef2474ac0097c68a 281 Gene3D G3DSA:1.10.286.20 180 226 1.3E-39 T 11-10-2018 AL538_16025 d3be44e24817fcf05c1411f6d2a65db0 308 SUPERFAMILY SSF53474 27 305 1.06E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_16025 d3be44e24817fcf05c1411f6d2a65db0 308 Pfam PF00561 alpha/beta hydrolase fold 32 133 1.2E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_16025 d3be44e24817fcf05c1411f6d2a65db0 308 Gene3D G3DSA:3.40.50.1820 25 308 2.5E-88 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 PRINTS PR00050 Cold shock protein signature 28 37 1.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 PRINTS PR00050 Cold shock protein signature 43 61 1.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 PRINTS PR00050 Cold shock protein signature 7 22 1.4E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 7.4E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 PIRSF PIRSF002599 1 70 2.4E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 SUPERFAMILY SSF50249 4 69 8.08E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 SMART SM00357 6 70 1.1E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_26950 2a8974a92c0776734c01980fd5b9e768 70 Gene3D G3DSA:2.40.50.140 2 69 2.9E-29 T 11-10-2018 AL538_23120 7e36531752214bc4c3828352d17f7213 363 SMART SM00327 105 304 3.4E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_23120 7e36531752214bc4c3828352d17f7213 363 SUPERFAMILY SSF53300 103 300 9.35E-35 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_23120 7e36531752214bc4c3828352d17f7213 363 Gene3D G3DSA:3.40.50.410 105 304 1.9E-51 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_23120 7e36531752214bc4c3828352d17f7213 363 Pfam PF00092 von Willebrand factor type A domain 107 297 1.5E-25 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 Gene3D G3DSA:3.10.310.10 6 259 5.4E-84 T 11-10-2018 AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 Gene3D G3DSA:3.10.310.10 119 251 5.4E-84 T 11-10-2018 AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 PIRSF PIRSF016184 1 263 4.9E-51 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 261 1.4E-32 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 SUPERFAMILY SSF54506 1 263 6.28E-73 T 11-10-2018 AL538_26435 8e68868a570ee40eb77a204e76287ff7 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 5.1E-54 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 Gene3D G3DSA:3.30.110.10 88 183 1.4E-38 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 Gene3D G3DSA:3.10.20.80 12 87 2.4E-29 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 SUPERFAMILY SSF55200 95 183 7.85E-34 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 19 183 1.1E-70 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 181 7.5E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 183 29.871 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 SUPERFAMILY SSF54364 16 90 5.1E-26 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL538_02125 d7ba881c347d8e149dad0e1faedd2a94 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 88 1.2E-27 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AL538_10120 e91cf2701f06fd1cb14f952afcc609f6 254 Gene3D G3DSA:3.20.20.140 1 254 4.1E-80 T 11-10-2018 AL538_10120 e91cf2701f06fd1cb14f952afcc609f6 254 Pfam PF01026 TatD related DNase 2 252 1.9E-63 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_10120 e91cf2701f06fd1cb14f952afcc609f6 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 5.2E-70 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AL538_10120 e91cf2701f06fd1cb14f952afcc609f6 254 PIRSF PIRSF005902 1 254 8.7E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 AL538_10120 e91cf2701f06fd1cb14f952afcc609f6 254 SUPERFAMILY SSF51556 1 253 2.68E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 SUPERFAMILY SSF109998 39 247 9.81E-39 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 Gene3D G3DSA:1.10.4030.30 240 373 3.0E-35 T 11-10-2018 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 Pfam PF13624 SurA N-terminal domain 1 166 4.6E-51 T 11-10-2018 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.6E-24 T 11-10-2018 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 Gene3D G3DSA:1.10.4030.30 42 176 2.0E-15 T 11-10-2018 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 Gene3D G3DSA:3.10.50.40 269 363 3.0E-35 T 11-10-2018 AL538_14270 b1f7f96e57521ee0b844833197a856e9 619 SUPERFAMILY SSF54534 225 361 5.95E-32 T 11-10-2018 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.368 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.7E-35 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.3E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.3E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 SUPERFAMILY SSF143800 1 68 1.18E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 Pfam PF01197 Ribosomal protein L31 1 66 1.1E-32 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10815 f6138d398ead9667b403b757b4ac80b2 73 Gene3D G3DSA:2.30.170.50 1 71 1.2E-33 T 11-10-2018 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 272 297 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 398 6.4E-95 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 Pfam PF01238 Phosphomannose isomerase type I 12 369 1.1E-80 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 Gene3D G3DSA:1.10.441.10 164 317 3.1E-128 T 11-10-2018 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 140 148 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PIRSF PIRSF001480 8 407 1.3E-99 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 272 291 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 253 272 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 140 163 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 291 310 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 237 252 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 95 116 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 2.4E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 Gene3D G3DSA:2.60.120.10 16 292 3.1E-128 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 SUPERFAMILY SSF51182 9 389 2.9E-99 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_24510 428a6ccbb9ea3922a1de32df5be9bc2c 407 Gene3D G3DSA:2.60.120.10 318 399 3.1E-128 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 4.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 4.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 4.4E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 135 3.6E-6 T 11-10-2018 IPR000014 PAS domain AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 Gene3D G3DSA:1.10.10.10 162 229 1.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 2.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 SUPERFAMILY SSF55785 24 135 9.95E-14 T 11-10-2018 IPR035965 PAS domain superfamily AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 SMART SM00421 168 225 1.1E-6 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 Gene3D G3DSA:3.30.450.20 21 140 8.0E-16 T 11-10-2018 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 SUPERFAMILY SSF46894 163 230 3.1E-13 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_19560 0d85e22e31a736f0ecb2f00ac5a9fe4d 251 Pfam PF08448 PAS fold 25 136 7.2E-25 T 11-10-2018 IPR013656 PAS fold-4 AL538_01685 bd0db6e1ebe72d66752007135fbdfc7a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 4.4E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_01685 bd0db6e1ebe72d66752007135fbdfc7a 306 SUPERFAMILY SSF161098 91 290 9.42E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL538_01685 bd0db6e1ebe72d66752007135fbdfc7a 306 Gene3D G3DSA:1.10.3720.10 84 301 1.0E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_18640 879dec93c32a50b7dedf2dfc618dc426 255 SUPERFAMILY SSF46785 96 153 7.1E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Pfam PF17128 Domain of unknown function (DUF5107) 40 344 7.0E-67 T 11-10-2018 IPR033396 Domain of unknown function DUF5107 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Gene3D G3DSA:1.25.40.10 569 670 1.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Pfam PF13181 Tetratricopeptide repeat 573 600 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 SUPERFAMILY SSF48452 745 1008 1.21E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Gene3D G3DSA:1.25.40.10 890 1036 1.6E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 SMART SM00028 745 778 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 SMART SM00028 569 602 7.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 SUPERFAMILY SSF48452 482 626 5.22E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Gene3D G3DSA:1.25.40.10 702 877 3.1E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23445 adb2f5fcc3b5f51efeed408e0e955205 1104 Gene3D G3DSA:1.25.40.10 459 562 9.3E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_22570 5b603bbb7bb3a9157beb3c03846c6ee3 365 Gene3D G3DSA:3.40.50.2300 180 359 2.5E-150 T 11-10-2018 AL538_22570 5b603bbb7bb3a9157beb3c03846c6ee3 365 Pfam PF13407 Periplasmic binding protein domain 69 324 7.7E-16 T 11-10-2018 IPR025997 Periplasmic binding protein AL538_22570 5b603bbb7bb3a9157beb3c03846c6ee3 365 SUPERFAMILY SSF53822 27 364 6.34E-87 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_22570 5b603bbb7bb3a9157beb3c03846c6ee3 365 Gene3D G3DSA:3.40.50.2300 33 363 2.5E-150 T 11-10-2018 AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 SUPERFAMILY SSF53901 210 391 7.88E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 Gene3D G3DSA:3.40.47.10 49 243 5.1E-30 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 SUPERFAMILY SSF53901 7 236 2.62E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 100 236 2.3E-20 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 SMART SM00825 Beta-ketoacyl synthase 64 338 4.5E-9 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 348 4.5E-26 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL538_14045 f1e7571905e5603ad249eeb759f6627a 395 Gene3D G3DSA:3.40.47.10 246 389 4.6E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Gene3D G3DSA:3.40.50.300 281 551 1.3E-67 T 11-10-2018 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 SUPERFAMILY SSF52540 310 518 1.6E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Pfam PF12848 ABC transporter 224 297 8.8E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Gene3D G3DSA:1.10.287.380 555 638 7.4E-29 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 SUPERFAMILY SSF52540 3 244 2.36E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Gene3D G3DSA:3.40.50.300 4 279 1.1E-68 T 11-10-2018 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 SMART SM00382 28 230 7.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00845 f8474cdf5f9421238adbd887310733cd 639 SMART SM00382 344 514 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Pfam PF00005 ABC transporter 19 185 6.6E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 8.6E-22 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AL538_00845 f8474cdf5f9421238adbd887310733cd 639 Pfam PF00005 ABC transporter 336 469 3.8E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 PIRSF PIRSF000156 1 887 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 Gene3D G3DSA:3.40.50.920 707 887 7.6E-70 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 SUPERFAMILY SSF52922 702 886 1.54E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 SUPERFAMILY SSF52518 474 701 1.88E-97 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 2.0E-9 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 SUPERFAMILY SSF52518 56 469 3.4E-139 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 Gene3D G3DSA:3.40.50.970 472 706 2.7E-111 T 11-10-2018 AL538_06480 7fd77b0a1aa462c71845fecb19dc912a 887 Gene3D G3DSA:3.40.50.970 55 471 3.3E-131 T 11-10-2018 AL538_00290 1f53d66ddb268eec91bc1f738396d7d9 160 Gene3D G3DSA:3.10.450.430 15 160 2.9E-48 T 11-10-2018 AL538_00290 1f53d66ddb268eec91bc1f738396d7d9 160 Pfam PF10980 Protein of unknown function (DUF2787) 29 158 3.8E-42 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 Gene3D G3DSA:1.10.287.950 203 535 2.8E-74 T 11-10-2018 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 Pfam PF00672 HAMP domain 205 252 1.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 SMART SM00283 272 533 1.1E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 SUPERFAMILY SSF58104 230 534 3.14E-73 T 11-10-2018 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 500 5.5E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_16045 7e901c47889a0ae9e431ea53d66b8edd 535 SMART SM00304 204 257 1.8E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_19515 cc3c56ab1ed0bbb87472121d32087798 194 Pfam PF03358 NADPH-dependent FMN reductase 13 137 3.4E-14 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL538_19515 cc3c56ab1ed0bbb87472121d32087798 194 SUPERFAMILY SSF52218 2 191 1.31E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_19515 cc3c56ab1ed0bbb87472121d32087798 194 Gene3D G3DSA:3.40.50.360 1 193 1.9E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_19635 7d63383f8835381b4eb670b106125c26 333 SUPERFAMILY SSF55909 27 321 3.6E-38 T 11-10-2018 AL538_19635 7d63383f8835381b4eb670b106125c26 333 Pfam PF02274 Amidinotransferase 31 326 1.2E-61 T 11-10-2018 AL538_19635 7d63383f8835381b4eb670b106125c26 333 PIRSF PIRSF028188 8 329 3.0E-154 T 11-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type AL538_19635 7d63383f8835381b4eb670b106125c26 333 Gene3D G3DSA:3.75.10.10 24 321 6.6E-45 T 11-10-2018 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.464 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 Gene3D G3DSA:3.30.260.10 138 410 1.5E-236 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 SUPERFAMILY SSF52029 185 376 1.73E-82 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 SUPERFAMILY SSF48592 7 521 1.6E-75 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 7.7E-254 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.1E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 Gene3D G3DSA:3.50.7.10 173 379 1.5E-236 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 SUPERFAMILY SSF54849 137 203 3.66E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AL538_08340 9671f9ed84b32e0a803c41fda928fc46 548 Gene3D G3DSA:1.10.560.10 8 521 1.5E-236 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.2E-36 T 11-10-2018 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 SMART SM00354 1 71 3.7E-32 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 SUPERFAMILY SSF47413 1 60 9.64E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 SUPERFAMILY SSF53822 61 330 2.36E-81 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 Gene3D G3DSA:3.40.50.2300 63 321 3.4E-72 T 11-10-2018 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 Gene3D G3DSA:3.40.50.2300 160 326 3.4E-72 T 11-10-2018 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 Gene3D G3DSA:1.10.260.40 1 59 1.6E-21 T 11-10-2018 AL538_05875 d2d8487736bc3ce45fe526f65497c00c 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.9E-57 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Gene3D G3DSA:3.90.226.10 1 312 2.6E-90 T 11-10-2018 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 SUPERFAMILY SSF48179 496 604 1.11E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 SUPERFAMILY SSF51735 315 496 2.66E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 SUPERFAMILY SSF48179 625 715 3.74E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Gene3D G3DSA:3.40.50.720 314 497 1.2E-64 T 11-10-2018 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 SUPERFAMILY SSF52096 2 305 2.42E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 206 5.7E-39 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.373 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Gene3D G3DSA:1.10.1040.50 498 710 1.4E-73 T 11-10-2018 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 5.2E-6 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_09770 edea20d7a3fd503ab3834867f26e01fd 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 6.3E-25 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AL538_13605 e707feff208ec4cab87dc47ffafcfd2b 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.3E-24 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AL538_13605 e707feff208ec4cab87dc47ffafcfd2b 92 Pfam PF10262 Rdx family 6 78 5.2E-31 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type AL538_13605 e707feff208ec4cab87dc47ffafcfd2b 92 SUPERFAMILY SSF52833 5 87 6.93E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_13605 e707feff208ec4cab87dc47ffafcfd2b 92 Gene3D G3DSA:3.40.30.10 2 92 4.3E-39 T 11-10-2018 AL538_10505 a2c2eb7f6a10b20b0dc5ec1a4a5d35a9 196 SUPERFAMILY SSF48498 81 191 6.67E-11 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_10505 a2c2eb7f6a10b20b0dc5ec1a4a5d35a9 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_10505 a2c2eb7f6a10b20b0dc5ec1a4a5d35a9 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.262 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 AL538_10505 a2c2eb7f6a10b20b0dc5ec1a4a5d35a9 196 SUPERFAMILY SSF46689 5 78 1.5E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_10505 a2c2eb7f6a10b20b0dc5ec1a4a5d35a9 196 Gene3D G3DSA:1.10.357.10 3 196 8.4E-78 T 11-10-2018 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL538_06670 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 SUPERFAMILY SSF55816 424 643 2.22E-24 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 Pfam PF02872 5'-nucleotidase, C-terminal domain 437 601 2.9E-18 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 PRINTS PR01607 Apyrase family signature 243 260 9.9E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 PRINTS PR01607 Apyrase family signature 583 602 9.9E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 PRINTS PR01607 Apyrase family signature 62 80 9.9E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 PRINTS PR01607 Apyrase family signature 332 352 9.9E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 PRINTS PR01607 Apyrase family signature 483 506 9.9E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 SUPERFAMILY SSF56300 58 390 5.29E-61 T 11-10-2018 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 Gene3D G3DSA:3.60.21.10 56 398 3.4E-65 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 Gene3D G3DSA:3.90.780.10 422 648 7.2E-38 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_12975 a8e63b91762fceb59dd7ff10121d300f 731 Pfam PF00149 Calcineurin-like phosphoesterase 66 285 1.9E-8 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 284 5.5E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 253 268 5.5E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 Pfam PF12833 Helix-turn-helix domain 209 285 1.9E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 Gene3D G3DSA:1.10.10.60 183 294 7.6E-26 T 11-10-2018 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 SMART SM00342 202 284 5.2E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19170 2b2a29015127e9edb21968a848cfb76f 300 SUPERFAMILY SSF46689 237 286 2.69E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_11060 d5324c620dde9f0ca945a0703d20fa71 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 1.3E-68 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_11060 d5324c620dde9f0ca945a0703d20fa71 212 SUPERFAMILY SSF55068 2 207 1.44E-80 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_11060 d5324c620dde9f0ca945a0703d20fa71 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.772 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_11060 d5324c620dde9f0ca945a0703d20fa71 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 1.8E-68 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_11060 d5324c620dde9f0ca945a0703d20fa71 212 Gene3D G3DSA:3.30.1060.10 3 212 6.0E-93 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 Gene3D G3DSA:3.90.640.10 336 378 1.5E-11 T 11-10-2018 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 SUPERFAMILY SSF53067 207 447 2.59E-33 T 11-10-2018 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 SUPERFAMILY SSF53067 1 205 2.04E-24 T 11-10-2018 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 Pfam PF00012 Hsp70 protein 129 259 8.8E-10 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_25315 36db573a4c755222e1769501d3fc26e4 450 Gene3D G3DSA:3.30.420.40 379 433 1.5E-11 T 11-10-2018 AL538_02985 f31b3cbd26a4e5118ce4f5b7c8036422 179 SUPERFAMILY SSF111126 1 176 2.3E-51 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AL538_02985 f31b3cbd26a4e5118ce4f5b7c8036422 179 Gene3D G3DSA:3.90.1520.10 1 178 1.1E-57 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL538_02985 f31b3cbd26a4e5118ce4f5b7c8036422 179 Pfam PF07700 Haem-NO-binding 2 162 1.1E-39 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 SUPERFAMILY SSF109755 10 225 1.05E-69 T 11-10-2018 AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 11-10-2018 IPR026022 PhoU domain AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 128 210 2.1E-16 T 11-10-2018 IPR026022 PhoU domain AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 2 117 5.6E-41 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.4E-75 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 PIRSF PIRSF003107 4 223 7.4E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AL538_12235 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 118 230 3.1E-34 T 11-10-2018 IPR038078 PhoU-like domain superfamily AL538_20320 b5767593b54343007fdf8011f6ddecfe 199 Gene3D G3DSA:3.40.1280.10 1 199 4.1E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_20320 b5767593b54343007fdf8011f6ddecfe 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 27.532 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL538_20320 b5767593b54343007fdf8011f6ddecfe 199 SUPERFAMILY SSF75217 1 198 9.94E-67 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_20320 b5767593b54343007fdf8011f6ddecfe 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 3.7E-66 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 Pfam PF12833 Helix-turn-helix domain 199 276 4.2E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 SUPERFAMILY SSF46689 179 226 3.85E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 SMART SM00342 193 276 6.8E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.9E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.9E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 SUPERFAMILY SSF46689 229 277 5.82E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_15110 f54686fcc343ecbe67402ec58b6820ca 286 Gene3D G3DSA:1.10.10.60 172 284 4.8E-29 T 11-10-2018 AL538_21030 5994940a7b54d2ec90a68b484ebde206 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL538_21030 5994940a7b54d2ec90a68b484ebde206 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_21030 5994940a7b54d2ec90a68b484ebde206 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 2.3E-34 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL538_21030 5994940a7b54d2ec90a68b484ebde206 120 PIRSF PIRSF002889 1 120 1.4E-33 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL538_18635 c1abceadbb59282c405aa0a2f03d5938 896 SUPERFAMILY SSF48208 247 891 3.17E-77 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_18635 c1abceadbb59282c405aa0a2f03d5938 896 Pfam PF01204 Trehalase 684 877 2.5E-8 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AL538_18635 c1abceadbb59282c405aa0a2f03d5938 896 Gene3D G3DSA:2.70.98.50 35 278 5.6E-73 T 11-10-2018 AL538_18635 c1abceadbb59282c405aa0a2f03d5938 896 Gene3D G3DSA:1.10.287.100 279 317 2.9E-10 T 11-10-2018 AL538_07130 d2c224d682256e575cc931110a847033 477 Gene3D G3DSA:3.40.605.10 18 466 1.2E-166 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 SUPERFAMILY SSF53720 16 474 2.88E-154 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 Gene3D G3DSA:3.40.309.10 256 443 1.2E-166 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 Pfam PF00171 Aldehyde dehydrogenase family 19 470 4.2E-159 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL538_07130 d2c224d682256e575cc931110a847033 477 PIRSF PIRSF036492 28 474 2.3E-83 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 SUPERFAMILY SSF53067 255 497 7.92E-85 T 11-10-2018 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 4.7E-86 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.2E-225 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 Gene3D G3DSA:3.30.420.40 255 501 7.6E-93 T 11-10-2018 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.185 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 SUPERFAMILY SSF53067 5 256 6.29E-94 T 11-10-2018 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 Gene3D G3DSA:3.30.420.40 2 254 1.4E-112 T 11-10-2018 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 PIRSF PIRSF000538 4 503 3.1E-177 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL538_05835 689d6e65cccb2f4384735f61d0261098 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 1.0E-59 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL538_14480 8a26ad089df14ee26f0ac7dba5b3e191 244 SUPERFAMILY SSF75217 96 243 1.24E-33 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_14480 8a26ad089df14ee26f0ac7dba5b3e191 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 9.1E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_14480 8a26ad089df14ee26f0ac7dba5b3e191 244 SUPERFAMILY SSF55315 4 93 4.24E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL538_14480 8a26ad089df14ee26f0ac7dba5b3e191 244 Gene3D G3DSA:3.30.1330.30 1 94 3.4E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL538_14480 8a26ad089df14ee26f0ac7dba5b3e191 244 Gene3D G3DSA:3.40.1280.10 96 244 6.7E-40 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 157 6.6E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 SUPERFAMILY SSF53671 14 322 4.37E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 Gene3D G3DSA:3.40.50.1370 147 309 3.3E-104 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 18 320 3.9E-97 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00102 Ornithine carbamoyltransferase signature 60 74 2.7E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00102 Ornithine carbamoyltransferase signature 133 147 2.7E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00102 Ornithine carbamoyltransferase signature 301 312 2.7E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00102 Ornithine carbamoyltransferase signature 93 106 2.7E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 275 284 1.2E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 62 81 1.2E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 310 1.2E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 144 155 1.2E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 167 320 2.8E-44 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL538_19730 77650f71911aa84b1ba1c33d207e85da 348 Gene3D G3DSA:3.40.50.1370 24 318 3.3E-104 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_10850 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10850 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AL538_10850 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10850 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10850 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10850 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 1.5E-48 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07730 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 SMART SM00304 353 403 87.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 SMART SM00304 296 350 2.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 SUPERFAMILY SSF58104 318 627 3.4E-78 T 11-10-2018 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 594 6.8E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Gene3D G3DSA:3.30.450.20 53 269 6.8E-28 T 11-10-2018 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Pfam PF02743 Cache domain 42 257 9.3E-24 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Pfam PF00672 HAMP domain 300 347 3.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Gene3D G3DSA:3.30.450.20 66 171 6.8E-28 T 11-10-2018 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 SMART SM00283 365 626 1.5E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_20010 7226fe1b5bdd73ebb54d4631071bcdd7 628 Gene3D G3DSA:1.10.287.950 296 628 1.0E-75 T 11-10-2018 AL538_17285 c78c0c34ea2100b5080ca9ce0714a1f9 273 Gene3D G3DSA:3.40.190.10 100 233 1.3E-82 T 11-10-2018 AL538_17285 c78c0c34ea2100b5080ca9ce0714a1f9 273 SUPERFAMILY SSF53850 16 273 4.01E-73 T 11-10-2018 AL538_17285 c78c0c34ea2100b5080ca9ce0714a1f9 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 9.0E-76 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL538_17285 c78c0c34ea2100b5080ca9ce0714a1f9 273 Gene3D G3DSA:3.40.190.10 30 264 1.3E-82 T 11-10-2018 AL538_17285 c78c0c34ea2100b5080ca9ce0714a1f9 273 Pfam PF12849 PBP superfamily domain 23 259 1.3E-40 T 11-10-2018 IPR024370 PBP domain AL538_20055 c333af7f02ec02039cb63d907baa0fd2 510 SUPERFAMILY SSF103473 203 422 4.05E-5 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_20055 c333af7f02ec02039cb63d907baa0fd2 510 Gene3D G3DSA:1.20.1250.20 2 186 2.1E-7 T 11-10-2018 AL538_20055 c333af7f02ec02039cb63d907baa0fd2 510 SUPERFAMILY SSF103473 5 185 5.89E-10 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_16920 7e428f6e25017922ec342b138a8c280b 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 767 4.4E-35 T 11-10-2018 IPR009612 ImcF-related AL538_16920 7e428f6e25017922ec342b138a8c280b 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 885 1079 1.7E-44 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL538_16920 7e428f6e25017922ec342b138a8c280b 1129 Pfam PF14331 ImcF-related N-terminal domain 173 418 1.2E-53 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AL538_16920 7e428f6e25017922ec342b138a8c280b 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 135 1126 2.7E-142 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AL538_10525 b599e7839223f9d627e9532763988061 78 Pfam PF00830 Ribosomal L28 family 3 62 2.6E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10525 b599e7839223f9d627e9532763988061 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.372 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10525 b599e7839223f9d627e9532763988061 78 Gene3D G3DSA:2.30.170.40 2 78 4.9E-33 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10525 b599e7839223f9d627e9532763988061 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 8.7E-28 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10525 b599e7839223f9d627e9532763988061 78 SUPERFAMILY SSF143800 2 76 4.91E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 Gene3D G3DSA:1.20.1050.10 88 203 6.9E-15 T 11-10-2018 AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 74 7.9E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 SUPERFAMILY SSF47616 74 193 1.91E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 Gene3D G3DSA:3.40.30.10 1 87 3.6E-13 T 11-10-2018 AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 SUPERFAMILY SSF52833 1 96 1.91E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_10000 f9413f2a94f19d174e19d4fb5414ba01 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 110 177 3.1E-11 T 11-10-2018 AL538_17480 90584a8e9028de0a4b5feba60d6a8cc5 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 2.3E-102 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL538_17480 90584a8e9028de0a4b5feba60d6a8cc5 563 Pfam PF02652 L-lactate permease 7 550 7.2E-106 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AL538_04505 e4f992886dbff5529030fd419a9a71ef 213 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 105 207 2.6E-26 T 11-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 AL538_04505 e4f992886dbff5529030fd419a9a71ef 213 Gene3D G3DSA:2.10.109.10 96 212 1.6E-25 T 11-10-2018 AL538_04505 e4f992886dbff5529030fd419a9a71ef 213 Gene3D G3DSA:1.10.260.40 12 76 2.2E-7 T 11-10-2018 AL538_04505 e4f992886dbff5529030fd419a9a71ef 213 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 17 77 5.4E-13 T 11-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AL538_01225 ed09fd3b5aaf7ff2458d318d746a0a93 471 SUPERFAMILY SSF56954 8 446 5.36E-69 T 11-10-2018 AL538_01225 ed09fd3b5aaf7ff2458d318d746a0a93 471 Pfam PF02321 Outer membrane efflux protein 265 446 1.0E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_01225 ed09fd3b5aaf7ff2458d318d746a0a93 471 Pfam PF02321 Outer membrane efflux protein 28 242 6.2E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_01225 ed09fd3b5aaf7ff2458d318d746a0a93 471 Gene3D G3DSA:1.20.1600.10 23 458 2.4E-65 T 11-10-2018 AL538_25910 122431465c4c29e435422b607dbb34e2 357 Gene3D G3DSA:3.30.450.20 56 174 1.1E-13 T 11-10-2018 AL538_25910 122431465c4c29e435422b607dbb34e2 357 Pfam PF13426 PAS domain 75 170 3.9E-8 T 11-10-2018 IPR000014 PAS domain AL538_25910 122431465c4c29e435422b607dbb34e2 357 Gene3D G3DSA:3.30.70.270 175 336 9.5E-49 T 11-10-2018 AL538_25910 122431465c4c29e435422b607dbb34e2 357 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 66 179 4.4E-11 T 11-10-2018 IPR000014 PAS domain AL538_25910 122431465c4c29e435422b607dbb34e2 357 SUPERFAMILY SSF55785 75 180 7.33E-11 T 11-10-2018 IPR035965 PAS domain superfamily AL538_25910 122431465c4c29e435422b607dbb34e2 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 334 6.9E-45 T 11-10-2018 IPR000160 GGDEF domain AL538_25910 122431465c4c29e435422b607dbb34e2 357 SMART SM00267 172 336 5.4E-44 T 11-10-2018 IPR000160 GGDEF domain AL538_25910 122431465c4c29e435422b607dbb34e2 357 SUPERFAMILY SSF55073 188 334 9.42E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_25910 122431465c4c29e435422b607dbb34e2 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 332 2.9E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_11545 eac050978016b50b4d91267074c7d15b 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL538_11545 eac050978016b50b4d91267074c7d15b 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 6.7E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AL538_11545 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:1.20.5.510 1 40 1.4E-5 T 11-10-2018 AL538_11545 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL538_11545 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL538_11545 eac050978016b50b4d91267074c7d15b 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AL538_11545 eac050978016b50b4d91267074c7d15b 196 Gene3D G3DSA:2.102.10.10 43 190 1.3E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_11545 eac050978016b50b4d91267074c7d15b 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.6E-74 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AL538_11545 eac050978016b50b4d91267074c7d15b 196 SUPERFAMILY SSF50022 30 189 1.89E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 7.8E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 Gene3D G3DSA:3.40.190.10 30 250 3.1E-72 T 11-10-2018 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 SUPERFAMILY SSF53850 3 255 1.13E-69 T 11-10-2018 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 SMART SM00079 28 253 1.8E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 Gene3D G3DSA:3.40.190.10 114 211 3.1E-72 T 11-10-2018 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 2.5E-81 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 SMART SM00062 28 254 7.4E-70 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_14680 d40fcaa8e052be6d4b2572fb24fc09fe 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Gene3D G3DSA:3.40.1190.10 81 314 8.4E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Gene3D G3DSA:3.90.190.20 315 453 1.8E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 4.3E-138 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 SUPERFAMILY SSF53623 100 313 1.31E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Gene3D G3DSA:3.40.1390.10 1 80 3.0E-29 T 11-10-2018 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Pfam PF01225 Mur ligase family, catalytic domain 24 80 2.2E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 SUPERFAMILY SSF63418 1 96 4.32E-26 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 SUPERFAMILY SSF53244 316 450 1.19E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.651 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Pfam PF08245 Mur ligase middle domain 105 295 7.9E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_11620 a16e60a8f6403e08137ac19dd547f295 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 396 1.2E-12 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_11025 c869caa1f628b6afc1d4349d3e75b760 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 8.9E-87 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AL538_11025 c869caa1f628b6afc1d4349d3e75b760 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 5.3E-110 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 AL538_05355 2e7bf027d415a395eca8c44fed573f95 251 Pfam PF08241 Methyltransferase domain 70 125 9.8E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_05355 2e7bf027d415a395eca8c44fed573f95 251 SUPERFAMILY SSF53335 73 212 1.89E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_05355 2e7bf027d415a395eca8c44fed573f95 251 Gene3D G3DSA:3.40.50.150 57 179 5.7E-15 T 11-10-2018 AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 Gene3D G3DSA:2.170.130.10 36 162 1.6E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 693 1.0E-94 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 Gene3D G3DSA:2.40.170.20 163 694 7.4E-102 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 151 2.7E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 SUPERFAMILY SSF56935 18 694 5.5E-117 T 11-10-2018 AL538_20465 b5a924438574ab1da987eb0f4b41fbdf 694 Pfam PF00593 TonB dependent receptor 245 693 2.0E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 4.2E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 165 2.9E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 Gene3D G3DSA:3.40.50.1000 12 184 2.0E-52 T 11-10-2018 IPR023214 HAD superfamily AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 171 3.0E-17 T 11-10-2018 AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 Gene3D G3DSA:1.10.260.80 24 75 2.0E-52 T 11-10-2018 AL538_22900 64ec51956d2e81ddf3216b708e0fc6c7 204 SUPERFAMILY SSF56784 10 198 1.16E-32 T 11-10-2018 IPR036412 HAD-like superfamily AL538_18400 a799a23f56fe88a2a722d7720a90b13a 289 Gene3D G3DSA:2.60.120.10 123 278 1.0E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_18400 a799a23f56fe88a2a722d7720a90b13a 289 Pfam PF04962 KduI/IolB family 14 273 1.7E-70 T 11-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL538_18400 a799a23f56fe88a2a722d7720a90b13a 289 SUPERFAMILY SSF51182 23 258 1.52E-36 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_18400 a799a23f56fe88a2a722d7720a90b13a 289 Gene3D G3DSA:2.60.120.10 16 122 8.8E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 SUPERFAMILY SSF51905 1 365 3.35E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.3E-64 T 11-10-2018 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 7.3E-71 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 Gene3D G3DSA:3.50.50.60 144 261 1.7E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.3E-214 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 PIRSF PIRSF000350 1 445 5.2E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_09995 2e04139169cfd54a1f06f27be006d51d 451 Gene3D G3DSA:3.50.50.60 5 315 1.7E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 Gene3D G3DSA:2.40.128.20 11 172 3.8E-52 T 11-10-2018 IPR012674 Calycin AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 3.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 PIRSF PIRSF036893 1 173 8.7E-46 T 11-10-2018 IPR022271 Lipocalin, ApoD type AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 Pfam PF08212 Lipocalin-like domain 32 171 1.0E-38 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL538_24775 a2de49163e619e257da648cc1dd10e7c 173 SUPERFAMILY SSF50814 7 172 4.05E-50 T 11-10-2018 IPR012674 Calycin AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 Pfam PF01494 FAD binding domain 5 347 1.7E-28 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 SUPERFAMILY SSF51905 5 385 7.92E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 6.3E-139 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 11-10-2018 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 11-10-2018 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 11-10-2018 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 11-10-2018 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 Gene3D G3DSA:3.30.9.50 80 270 4.9E-125 T 11-10-2018 AL538_06860 2f1e8cccbee8e8fed40425a870822362 402 Gene3D G3DSA:3.50.50.60 6 339 4.9E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 SUPERFAMILY SSF53335 26 257 3.72E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 258 2.8E-102 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.178 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 1.6E-82 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL538_10090 e1b6260aac4e835a73e6a6aaeeb2c198 259 Gene3D G3DSA:3.40.50.150 39 259 1.0E-74 T 11-10-2018 AL538_17785 33df6fb2377370fabdb1adf32b02d3e9 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 1.7E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_17785 33df6fb2377370fabdb1adf32b02d3e9 121 Gene3D G3DSA:3.10.180.10 8 121 1.3E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_17785 33df6fb2377370fabdb1adf32b02d3e9 121 SUPERFAMILY SSF54593 12 120 1.75E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 Pfam PF04399 Glutaredoxin 2, C terminal domain 98 226 3.1E-26 T 11-10-2018 IPR007494 Glutaredoxin 2, C-terminal AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 80 4.2E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 Gene3D G3DSA:3.40.30.10 1 104 5.2E-9 T 11-10-2018 AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 Gene3D G3DSA:1.20.1050.10 105 228 1.3E-25 T 11-10-2018 AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 SUPERFAMILY SSF47616 93 226 1.09E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_26840 cac52c0b59ac7070ae49933dc77532ef 235 SUPERFAMILY SSF52833 1 81 2.28E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25885 f029f47aaf1a591c877acad1beb9d6aa 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 307 3.2E-147 T 11-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AL538_25885 f029f47aaf1a591c877acad1beb9d6aa 312 SUPERFAMILY SSF53850 20 296 3.26E-89 T 11-10-2018 AL538_25885 f029f47aaf1a591c877acad1beb9d6aa 312 Gene3D G3DSA:3.40.190.100 109 218 9.2E-97 T 11-10-2018 AL538_25885 f029f47aaf1a591c877acad1beb9d6aa 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 2.9E-61 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AL538_25885 f029f47aaf1a591c877acad1beb9d6aa 312 Gene3D G3DSA:3.40.190.10 28 289 9.2E-97 T 11-10-2018 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 Pfam PF00027 Cyclic nucleotide-binding domain 21 100 8.0E-11 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 Gene3D G3DSA:2.60.120.10 4 131 5.8E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 SUPERFAMILY SSF51206 16 132 3.93E-16 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 5.5E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 Gene3D G3DSA:3.30.565.10 290 444 5.3E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 SMART SM00387 329 440 1.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 Gene3D G3DSA:1.10.287.130 132 238 2.4E-10 T 11-10-2018 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 5.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 5.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 5.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 5.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 SMART SM00100 1 121 1.2E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_16480 44a339ecf37a6a08aef6930b5bee676d 445 SUPERFAMILY SSF55874 297 437 2.62E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_02100 bfec4df914ec5d52f1bb62efb1e461f4 104 Gene3D G3DSA:3.30.110.70 1 104 4.8E-33 T 11-10-2018 AL538_02100 bfec4df914ec5d52f1bb62efb1e461f4 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.233 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL538_02100 bfec4df914ec5d52f1bb62efb1e461f4 104 Pfam PF01906 Putative heavy-metal-binding 1 103 1.3E-39 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AL538_02100 bfec4df914ec5d52f1bb62efb1e461f4 104 SUPERFAMILY SSF117782 1 103 9.16E-38 T 11-10-2018 IPR035439 UPF0145 domain superfamily AL538_17070 0894e1babbab39d637c3283191f96f8e 232 SUPERFAMILY SSF52402 1 211 9.48E-67 T 11-10-2018 AL538_17070 0894e1babbab39d637c3283191f96f8e 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.101 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL538_17070 0894e1babbab39d637c3283191f96f8e 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.7E-85 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL538_17070 0894e1babbab39d637c3283191f96f8e 232 Gene3D G3DSA:3.40.50.620 1 230 3.5E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_17070 0894e1babbab39d637c3283191f96f8e 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 2.7E-83 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL538_17070 0894e1babbab39d637c3283191f96f8e 232 PIRSF PIRSF006293 1 225 3.8E-84 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 PIRSF PIRSF006004 3 366 4.9E-144 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 Gene3D G3DSA:1.10.150.530 1 67 8.0E-26 T 11-10-2018 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 3.9E-161 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 Gene3D G3DSA:3.20.20.70 68 338 3.9E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 Pfam PF04055 Radical SAM superfamily 109 283 1.7E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 SUPERFAMILY SSF102114 103 312 4.05E-13 T 11-10-2018 AL538_12395 8aaac82c14906c7d7fc0c5d2523a6c70 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.819 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AL538_13025 bd34df2731c0f38a49fdd00c6db63b44 508 SUPERFAMILY SSF46894 9 112 2.72E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_13025 bd34df2731c0f38a49fdd00c6db63b44 508 Gene3D G3DSA:1.10.10.10 4 115 1.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13025 bd34df2731c0f38a49fdd00c6db63b44 508 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 6.8E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_13025 bd34df2731c0f38a49fdd00c6db63b44 508 SMART SM00862 31 111 2.5E-8 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 381 2.8E-149 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 199 213 1.5E-39 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 252 1.5E-39 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 269 285 1.5E-39 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 311 322 1.5E-39 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 286 303 1.5E-39 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 Pfam PF00117 Glutamine amidotransferase class-I 202 377 3.2E-47 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.9E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00097 Anthranilate synthase component II signature 269 280 1.2E-5 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00097 Anthranilate synthase component II signature 354 367 1.2E-5 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00097 Anthranilate synthase component II signature 241 250 1.2E-5 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 383 48.807 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 354 367 4.0E-11 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 250 4.0E-11 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 PRINTS PR00096 Glutamine amidotransferase superfamily signature 269 280 4.0E-11 T 11-10-2018 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 SUPERFAMILY SSF52317 158 382 3.52E-63 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 Gene3D G3DSA:3.50.30.20 3 156 2.1E-60 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 Gene3D G3DSA:3.40.50.880 157 383 1.9E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 SUPERFAMILY SSF52021 5 139 1.31E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11685 6e7eacae4c344fc30cd63780a769f6f6 384 SMART SM01097 3 133 2.4E-93 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 SUPERFAMILY SSF55060 178 294 4.89E-33 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 Gene3D G3DSA:3.30.70.890 174 283 9.8E-89 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PIRSF PIRSF000676 1 316 8.4E-81 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 1.9E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 11-10-2018 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 11-10-2018 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 11-10-2018 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 11-10-2018 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 11-10-2018 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 Pfam PF08544 GHMP kinases C terminal 218 291 1.9E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.09 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.1E-109 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 Gene3D G3DSA:3.30.230.10 5 173 9.8E-89 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_11815 a1fec7a0f44429cdd1b66d63b84c3713 318 SUPERFAMILY SSF54211 3 191 1.29E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Gene3D G3DSA:3.40.50.740 86 566 1.1E-214 T 11-10-2018 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 SUPERFAMILY SSF50692 672 813 1.97E-40 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 814 0.0 T 11-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Gene3D G3DSA:2.40.40.20 651 809 7.7E-45 T 11-10-2018 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-24 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.9E-104 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Gene3D G3DSA:3.40.228.10 178 643 1.1E-214 T 11-10-2018 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 Gene3D G3DSA:3.90.55.10 83 617 1.1E-214 T 11-10-2018 AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 7.2E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_20265 4dd2de7c6acb4fb096719ef26f9edfc1 815 SUPERFAMILY SSF53706 47 667 6.54E-162 T 11-10-2018 AL538_02955 ab61671be634dd3097fe67c3ff4c22e9 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 8.6E-49 T 11-10-2018 IPR021147 Protein of unknown function DUF697 AL538_02955 ab61671be634dd3097fe67c3ff4c22e9 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 55 339 5.3E-73 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 AL538_02955 ab61671be634dd3097fe67c3ff4c22e9 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.421 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Gene3D G3DSA:2.40.50.140 47 140 2.1E-13 T 11-10-2018 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 5.1E-239 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 5.9E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Pfam PF17191 RecG wedge domain 14 172 2.0E-21 T 11-10-2018 IPR033454 RecG, wedge domain AL538_10375 9eada901bd2a1debdda405f804c83e94 693 SUPERFAMILY SSF52540 292 653 2.61E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10375 9eada901bd2a1debdda405f804c83e94 693 SMART SM00490 505 589 1.2E-21 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 1.8E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 SUPERFAMILY SSF50249 9 174 4.28E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_10375 9eada901bd2a1debdda405f804c83e94 693 SUPERFAMILY SSF52540 200 453 9.21E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Gene3D G3DSA:3.40.50.300 208 450 4.2E-83 T 11-10-2018 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 Gene3D G3DSA:3.40.50.300 457 630 9.1E-53 T 11-10-2018 AL538_10375 9eada901bd2a1debdda405f804c83e94 693 SMART SM00487 265 459 4.6E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_01995 25d4a86dc4a71109748c92da4107d925 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.579 T 11-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 Gene3D G3DSA:3.40.140.10 29 179 1.9E-44 T 11-10-2018 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 PIRSF PIRSF006334 14 295 2.4E-109 T 11-10-2018 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 64 142 7.5E-12 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL538_01995 25d4a86dc4a71109748c92da4107d925 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.7E-42 T 11-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 Gene3D G3DSA:3.40.140.10 180 295 1.9E-26 T 11-10-2018 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 SUPERFAMILY SSF53927 152 287 4.51E-37 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 7.3E-101 T 11-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AL538_01995 25d4a86dc4a71109748c92da4107d925 295 SUPERFAMILY SSF53927 1 147 5.69E-41 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 325 8.5E-99 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 SUPERFAMILY SSF53335 4 328 2.08E-92 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 Gene3D G3DSA:3.90.120.10 146 315 3.6E-116 T 11-10-2018 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 323 1.9E-83 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 Gene3D G3DSA:3.40.50.150 6 321 3.6E-116 T 11-10-2018 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 1.0E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 151 164 1.0E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 105 119 1.0E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_13910 9d3f1f7b63a46693d87384b40775160c 337 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 66 78 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 Gene3D G3DSA:3.40.50.1000 2 310 2.5E-167 T 11-10-2018 IPR023214 HAD superfamily AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 5.7E-83 T 11-10-2018 AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 Gene3D G3DSA:1.10.150.210 115 177 2.5E-167 T 11-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 8.6E-14 T 11-10-2018 AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 8.9E-27 T 11-10-2018 AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 SUPERFAMILY SSF56784 104 311 1.12E-48 T 11-10-2018 IPR036412 HAD-like superfamily AL538_06050 a05663e01998c38b1c4ea8d18ce15f1a 326 Gene3D G3DSA:3.30.70.2020 8 322 2.5E-167 T 11-10-2018 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 Pfam PF00924 Mechanosensitive ion channel 138 341 9.6E-56 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 SUPERFAMILY SSF82689 252 351 6.15E-19 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 Gene3D G3DSA:2.30.30.60 196 248 3.5E-10 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 SUPERFAMILY SSF82861 97 179 2.48E-14 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 Gene3D G3DSA:3.30.70.100 249 346 2.5E-14 T 11-10-2018 AL538_17495 d25597b1db0538ddf970896e6b056eb2 367 SUPERFAMILY SSF50182 180 247 6.54E-18 T 11-10-2018 IPR010920 LSM domain superfamily AL538_27080 4281c61c3d79555927535b51ed5da6f2 268 SUPERFAMILY SSF81345 40 237 5.49E-10 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_27080 4281c61c3d79555927535b51ed5da6f2 268 Pfam PF00950 ABC 3 transport family 4 240 2.0E-11 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL538_03200 4f469444998645f4d6d8643e38834e5f 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 3.0E-26 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_03200 4f469444998645f4d6d8643e38834e5f 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_03200 4f469444998645f4d6d8643e38834e5f 228 Gene3D G3DSA:3.30.70.20 76 228 2.4E-55 T 11-10-2018 AL538_03200 4f469444998645f4d6d8643e38834e5f 228 Gene3D G3DSA:3.30.70.20 26 75 6.6E-6 T 11-10-2018 AL538_03200 4f469444998645f4d6d8643e38834e5f 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 1.9E-130 T 11-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AL538_03200 4f469444998645f4d6d8643e38834e5f 228 SUPERFAMILY SSF54862 40 220 1.15E-63 T 11-10-2018 AL538_03200 4f469444998645f4d6d8643e38834e5f 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.068 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_17625 c7d45729b97036b9428bf8f377a1ef24 217 SUPERFAMILY SSF52499 4 209 3.4E-26 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_17625 c7d45729b97036b9428bf8f377a1ef24 217 Gene3D G3DSA:3.40.50.850 7 212 1.5E-35 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_17625 c7d45729b97036b9428bf8f377a1ef24 217 Pfam PF00857 Isochorismatase family 10 209 1.8E-33 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL538_16635 f501f7344e25d9960ed119875c8e50fa 242 SUPERFAMILY SSF48150 53 198 1.57E-40 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL538_16635 f501f7344e25d9960ed119875c8e50fa 242 Gene3D G3DSA:1.10.340.30 51 172 5.6E-19 T 11-10-2018 AL538_16635 f501f7344e25d9960ed119875c8e50fa 242 Pfam PF03352 Methyladenine glycosylase 56 151 9.6E-16 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Gene3D G3DSA:3.40.50.300 1 293 2.1E-86 T 11-10-2018 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Gene3D G3DSA:3.40.50.300 301 571 6.8E-87 T 11-10-2018 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 SMART SM00382 32 231 7.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09900 6e09caef7cc7014ec60889608458eab7 571 SMART SM00382 338 534 3.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Pfam PF00005 ABC transporter 330 483 1.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 SUPERFAMILY SSF52540 304 553 1.33E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Pfam PF00005 ABC transporter 24 181 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 SUPERFAMILY SSF52540 3 253 8.95E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.3E-4 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 281 3.0E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_09900 6e09caef7cc7014ec60889608458eab7 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17105 4ddaad204c9d3adc0d2d7783beda7c64 1458 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1132 1411 2.6E-37 T 11-10-2018 IPR031161 Peptidase family M60 domain AL538_17105 4ddaad204c9d3adc0d2d7783beda7c64 1458 Gene3D G3DSA:1.10.390.30 1259 1425 3.5E-11 T 11-10-2018 AL538_17105 4ddaad204c9d3adc0d2d7783beda7c64 1458 Pfam PF17291 N-terminal domain of M60-like peptidases 1020 1107 2.4E-13 T 11-10-2018 IPR035423 M60-like domain, N-terminal AL538_17105 4ddaad204c9d3adc0d2d7783beda7c64 1458 Pfam PF13322 Domain of unknown function (DUF4092) 397 533 2.4E-32 T 11-10-2018 IPR025385 Domain of unknown function DUF4092 AL538_17105 4ddaad204c9d3adc0d2d7783beda7c64 1458 SMART SM01276 1033 1331 1.2E-74 T 11-10-2018 IPR031161 Peptidase family M60 domain AL538_09730 2af9c38956da91008b313253d82c9bd7 305 Gene3D G3DSA:3.30.930.10 1 215 3.2E-110 T 11-10-2018 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 SUPERFAMILY SSF55681 8 293 6.96E-133 T 11-10-2018 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 Gene3D G3DSA:1.20.58.180 216 298 7.0E-34 T 11-10-2018 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 1.5E-148 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 1.4E-169 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_09730 2af9c38956da91008b313253d82c9bd7 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.592 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 SUPERFAMILY SSF52467 181 382 1.76E-40 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 575 1.1E-24 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Gene3D G3DSA:3.40.50.970 395 591 6.8E-34 T 11-10-2018 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 SUPERFAMILY SSF52518 1 210 6.45E-29 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 SUPERFAMILY SSF52518 399 584 4.07E-40 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Gene3D G3DSA:3.40.50.970 8 197 4.0E-27 T 11-10-2018 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 352 8.1E-30 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 4.8E-33 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 620 1.6E-260 T 11-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 AL538_18415 660ec8efcc89f49878f6f30cacd0dcc1 623 Gene3D G3DSA:3.40.50.1220 212 394 5.3E-36 T 11-10-2018 AL538_02990 cf82e371001347a41d2e116f7a8f4dc3 199 Pfam PF00293 NUDIX domain 39 161 1.3E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_02990 cf82e371001347a41d2e116f7a8f4dc3 199 Gene3D G3DSA:3.90.79.10 20 195 9.9E-48 T 11-10-2018 AL538_02990 cf82e371001347a41d2e116f7a8f4dc3 199 SUPERFAMILY SSF55811 37 189 7.45E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_05530 5e3206c2b852d3c4157156c61dc3496b 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.71 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AL538_05530 5e3206c2b852d3c4157156c61dc3496b 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 9.9E-48 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 AL538_08615 8950fb1b7cc294eb52c22fcd1dc9106d 307 SUPERFAMILY SSF52283 25 120 1.93E-7 T 11-10-2018 AL538_08615 8950fb1b7cc294eb52c22fcd1dc9106d 307 SUPERFAMILY SSF51735 93 273 5.27E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_08615 8950fb1b7cc294eb52c22fcd1dc9106d 307 Gene3D G3DSA:3.40.50.720 91 276 5.3E-94 T 11-10-2018 AL538_08615 8950fb1b7cc294eb52c22fcd1dc9106d 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 5.1E-47 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_08615 8950fb1b7cc294eb52c22fcd1dc9106d 307 Gene3D G3DSA:3.40.50.720 34 299 5.3E-94 T 11-10-2018 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 SUPERFAMILY SSF52374 340 471 5.07E-23 T 11-10-2018 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 2.7E-127 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 1.0E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 4.5E-61 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 Gene3D G3DSA:3.40.50.620 322 474 9.4E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_11470 877946aa7df32ca379690b4d600bdc04 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 1.4E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_11470 877946aa7df32ca379690b4d600bdc04 476 Pfam PF01467 Cytidylyltransferase-like 345 468 4.9E-14 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 Gene3D G3DSA:3.40.1190.20 6 310 3.8E-112 T 11-10-2018 IPR029056 Ribokinase-like AL538_11470 877946aa7df32ca379690b4d600bdc04 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.845 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 AL538_11470 877946aa7df32ca379690b4d600bdc04 476 SUPERFAMILY SSF53613 12 303 5.46E-59 T 11-10-2018 IPR029056 Ribokinase-like AL538_17945 1e1e4ddd5ab61493e5df803547d1674c 324 Gene3D G3DSA:1.10.10.800 173 252 3.3E-59 T 11-10-2018 AL538_17945 1e1e4ddd5ab61493e5df803547d1674c 324 Gene3D G3DSA:3.40.50.1820 49 306 3.3E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17945 1e1e4ddd5ab61493e5df803547d1674c 324 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 34 174 4.7E-12 T 11-10-2018 IPR010520 UPF0255 family AL538_17945 1e1e4ddd5ab61493e5df803547d1674c 324 SUPERFAMILY SSF53474 33 324 5.57E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_07900 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 11-10-2018 AL538_07900 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07900 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_07900 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_19995 4c15ed12b3d5583a8ffab5e9de954ea7 140 Pfam PF02566 OsmC-like protein 38 133 3.8E-18 T 11-10-2018 IPR003718 OsmC/Ohr family AL538_19995 4c15ed12b3d5583a8ffab5e9de954ea7 140 Gene3D G3DSA:3.30.300.20 44 140 2.6E-32 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_19995 4c15ed12b3d5583a8ffab5e9de954ea7 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 2.2E-52 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AL538_19995 4c15ed12b3d5583a8ffab5e9de954ea7 140 SUPERFAMILY SSF82784 1 135 2.75E-42 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AL538_19995 4c15ed12b3d5583a8ffab5e9de954ea7 140 Gene3D G3DSA:2.20.25.10 1 43 1.6E-21 T 11-10-2018 AL538_15375 b0e5c34b66d0dfebb295b3c8a488037b 221 Pfam PF06226 Protein of unknown function (DUF1007) 16 216 2.5E-46 T 11-10-2018 IPR010412 Protein of unknown function DUF1007 AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 Pfam PF06969 HemN C-terminal domain 314 374 5.0E-9 T 11-10-2018 IPR010723 HemN, C-terminal AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 1.6E-137 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 Pfam PF04055 Radical SAM superfamily 11 181 1.3E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 SMART SM00729 6 227 5.7E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 Gene3D G3DSA:3.80.30.20 2 305 2.3E-96 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_07030 4193d1a7ed3845364795589af6e75c3a 390 SUPERFAMILY SSF102114 4 386 3.79E-110 T 11-10-2018 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 SUPERFAMILY SSF46785 5 85 1.71E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 Gene3D G3DSA:3.40.190.290 95 261 8.8E-10 T 11-10-2018 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 SUPERFAMILY SSF53850 93 281 2.71E-13 T 11-10-2018 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 Gene3D G3DSA:1.10.10.10 3 89 5.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 Pfam PF03466 LysR substrate binding domain 96 246 2.2E-9 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26035 56b5def570280ff03bd805c16b17f1d0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.8E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.6E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 Pfam PF00106 short chain dehydrogenase 3 190 8.8E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 Gene3D G3DSA:3.40.50.720 2 228 6.2E-56 T 11-10-2018 AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 SUPERFAMILY SSF51735 4 222 4.8E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0095 T 11-10-2018 AL538_26495 3a8486d90aa221a9e73030d0768489b6 259 PIRSF PIRSF000126 1 258 2.9E-67 T 11-10-2018 AL538_12045 5469ba99cbc2b4cd1141682be79be1ff 370 Gene3D G3DSA:3.30.420.40 146 329 7.5E-133 T 11-10-2018 AL538_12045 5469ba99cbc2b4cd1141682be79be1ff 370 Gene3D G3DSA:3.30.420.40 12 364 7.5E-133 T 11-10-2018 AL538_12045 5469ba99cbc2b4cd1141682be79be1ff 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.979 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AL538_12045 5469ba99cbc2b4cd1141682be79be1ff 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 1.3E-168 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 AL538_12045 5469ba99cbc2b4cd1141682be79be1ff 370 SUPERFAMILY SSF53067 6 343 3.74E-26 T 11-10-2018 AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.034 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 7.7E-161 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 PIRSF PIRSF000525 5 367 2.9E-153 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 Pfam PF00266 Aminotransferase class-V 11 355 1.9E-61 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 SUPERFAMILY SSF53383 10 365 6.81E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 Gene3D G3DSA:3.90.1150.10 265 367 2.2E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_16340 a7167edbdeba4b667fa442b2f662beec 367 Gene3D G3DSA:3.40.640.10 24 264 1.7E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 467 1.9E-19 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 Gene3D G3DSA:3.30.1360.60 403 484 1.1E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 Pfam PF00367 phosphotransferase system, EIIB 409 442 8.3E-15 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 479 3.8E-192 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 420 437 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 SUPERFAMILY SSF55604 406 479 3.01E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_14335 7bfd7646f43b9bacfc7fa37ce114d3c2 484 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.9E-71 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 9.4E-62 T 11-10-2018 AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.0E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.4E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 Gene3D G3DSA:3.40.50.720 1 243 2.4E-80 T 11-10-2018 AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0028 T 11-10-2018 AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_20250 82eeaabf012574cdbb3658b874b9a059 243 SUPERFAMILY SSF51735 3 242 1.06E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_19155 630da18a6833ee65e1e48bf3e31f33a0 334 Gene3D G3DSA:1.10.3470.10 5 334 5.8E-91 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_19155 630da18a6833ee65e1e48bf3e31f33a0 334 Pfam PF01032 FecCD transport family 18 332 2.7E-86 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_19155 630da18a6833ee65e1e48bf3e31f33a0 334 SUPERFAMILY SSF81345 5 332 4.71E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_03280 9ec0b589695be73d57730532574c3bc8 963 SUPERFAMILY SSF53383 42 464 1.79E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 2.5E-60 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Gene3D G3DSA:3.40.640.10 575 843 2.3E-139 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Pfam PF00202 Aminotransferase class-III 51 464 2.2E-93 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Gene3D G3DSA:3.40.640.10 87 355 7.7E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Gene3D G3DSA:1.20.1650.10 463 560 2.2E-44 T 11-10-2018 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 SUPERFAMILY SSF53383 502 957 1.97E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Gene3D G3DSA:3.90.1150.10 38 462 7.7E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 Gene3D G3DSA:3.90.1150.10 561 952 2.3E-139 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_03280 9ec0b589695be73d57730532574c3bc8 963 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 33 466 2.4E-159 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 SUPERFAMILY SSF102114 34 277 2.16E-7 T 11-10-2018 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 PIRSF PIRSF000371 1 293 5.5E-97 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 Pfam PF04055 Radical SAM superfamily 29 225 1.5E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 Gene3D G3DSA:3.80.30.10 118 285 2.3E-27 T 11-10-2018 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 SUPERFAMILY SSF54862 28 141 2.23E-14 T 11-10-2018 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 Pfam PF13353 4Fe-4S single cluster domain 21 179 2.7E-8 T 11-10-2018 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 Gene3D G3DSA:3.20.20.70 8 72 3.6E-11 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_16510 3f2fce55763dc2ecbc3aa38d42df7a28 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 3.3E-128 T 11-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SMART SM00533 283 590 1.6E-106 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SUPERFAMILY SSF52540 566 797 5.8E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06700 407317b44e5c39886d829b4fe890a10c 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Pfam PF01624 MutS domain I 8 119 4.6E-41 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Gene3D G3DSA:1.10.1420.10 386 502 1.6E-104 T 11-10-2018 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Pfam PF05188 MutS domain II 128 253 5.2E-30 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SUPERFAMILY SSF53150 114 266 2.09E-40 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SUPERFAMILY SSF55271 4 113 6.15E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Pfam PF05192 MutS domain III 269 558 1.7E-40 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Gene3D G3DSA:3.40.1170.10 1 121 7.6E-52 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Pfam PF00488 MutS domain V 609 796 1.2E-86 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Gene3D G3DSA:3.40.50.300 567 850 2.6E-100 T 11-10-2018 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Gene3D G3DSA:1.10.1420.10 266 558 1.6E-104 T 11-10-2018 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.189 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SUPERFAMILY SSF48334 267 564 1.7E-91 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AL538_06700 407317b44e5c39886d829b4fe890a10c 853 PIRSF PIRSF037677 1 180 3.0E-26 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 PIRSF PIRSF037677 189 830 9.7E-130 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Gene3D G3DSA:3.30.420.110 127 261 8.4E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 Pfam PF05190 MutS family domain IV 427 517 1.3E-30 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AL538_06700 407317b44e5c39886d829b4fe890a10c 853 SMART SM00534 606 793 2.7E-119 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AL538_16080 1e068558d6ff4e28360371ecd790d527 215 Pfam PF00005 ABC transporter 22 163 8.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16080 1e068558d6ff4e28360371ecd790d527 215 SMART SM00382 28 214 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16080 1e068558d6ff4e28360371ecd790d527 215 Gene3D G3DSA:3.40.50.300 1 204 3.7E-52 T 11-10-2018 AL538_16080 1e068558d6ff4e28360371ecd790d527 215 SUPERFAMILY SSF52540 10 199 3.25E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 PIRSF PIRSF000089 6 321 2.2E-108 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 SUPERFAMILY SSF52467 199 320 4.36E-49 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 Gene3D G3DSA:3.40.50.1220 196 321 5.4E-58 T 11-10-2018 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 3.1E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 Pfam PF01012 Electron transfer flavoprotein domain 8 171 1.9E-36 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 265 291 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 SUPERFAMILY SSF52402 8 193 3.21E-45 T 11-10-2018 AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 Gene3D G3DSA:3.40.50.620 8 195 2.5E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_25345 ba43d6bf29404d09f74093f04f700b22 321 SMART SM00893 8 194 4.7E-41 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 Gene3D G3DSA:3.30.70.100 1 96 4.7E-34 T 11-10-2018 AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 SMART SM00450 113 214 1.0E-22 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 Pfam PF00581 Rhodanese-like domain 117 210 3.8E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 SUPERFAMILY SSF52821 94 240 1.11E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.816 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AL538_18175 ee148f7932710cc3d37e93e4da9d4ce5 326 Gene3D G3DSA:3.40.250.10 97 253 3.4E-52 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 SUPERFAMILY SSF56300 32 364 9.59E-97 T 11-10-2018 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 SUPERFAMILY SSF55816 366 542 6.93E-53 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 2.2E-35 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 Gene3D G3DSA:3.60.21.10 30 365 2.3E-127 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 487 506 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 36 54 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 242 265 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 420 443 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 287 307 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 PRINTS PR01607 Apyrase family signature 211 228 6.1E-52 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 Gene3D G3DSA:3.90.780.10 366 552 1.1E-59 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_13295 1ee62307ea0ca6d6aee999bfa60c635d 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.1E-22 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_01595 82c6cced5df020fca3b0ada313fdd6de 121 Pfam PF07883 Cupin domain 29 94 1.2E-14 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL538_01595 82c6cced5df020fca3b0ada313fdd6de 121 Gene3D G3DSA:2.60.120.10 1 104 7.0E-33 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01595 82c6cced5df020fca3b0ada313fdd6de 121 SUPERFAMILY SSF51182 1 106 1.73E-27 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_26400 aa59a1fa612bf5aeb76a8488b0b2020d 122 Gene3D G3DSA:1.10.10.10 5 122 7.7E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26400 aa59a1fa612bf5aeb76a8488b0b2020d 122 Pfam PF01638 HxlR-like helix-turn-helix 31 116 5.7E-24 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AL538_26400 aa59a1fa612bf5aeb76a8488b0b2020d 122 SUPERFAMILY SSF46785 17 119 8.65E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 SUPERFAMILY SSF53244 331 479 1.68E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Pfam PF08245 Mur ligase middle domain 132 312 4.2E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Gene3D G3DSA:3.40.1190.10 116 330 7.3E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Pfam PF01225 Mur ligase family, catalytic domain 30 126 1.4E-28 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 27 484 43.954 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 SUPERFAMILY SSF51984 28 114 1.57E-29 T 11-10-2018 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Gene3D G3DSA:3.90.190.20 331 487 1.3E-49 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 SUPERFAMILY SSF53623 113 327 1.3E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 30 478 4.0E-188 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Gene3D G3DSA:3.40.50.720 28 115 5.3E-34 T 11-10-2018 AL538_11645 3d2c53fb667ebd74336efedceef3f80c 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 422 3.6E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_16660 9faa0711123b66a58d741d683c5548b0 513 SUPERFAMILY SSF55073 362 511 1.1E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_16660 9faa0711123b66a58d741d683c5548b0 513 Pfam PF03924 CHASE domain 84 271 5.4E-24 T 11-10-2018 IPR006189 CHASE domain AL538_16660 9faa0711123b66a58d741d683c5548b0 513 Gene3D G3DSA:3.30.70.270 351 512 5.9E-43 T 11-10-2018 AL538_16660 9faa0711123b66a58d741d683c5548b0 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 507 1.5E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_16660 9faa0711123b66a58d741d683c5548b0 513 SMART SM01079 75 274 7.8E-31 T 11-10-2018 IPR006189 CHASE domain AL538_16660 9faa0711123b66a58d741d683c5548b0 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 510 1.1E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_16660 9faa0711123b66a58d741d683c5548b0 513 Gene3D G3DSA:3.30.450.350 84 299 1.1E-5 T 11-10-2018 AL538_16660 9faa0711123b66a58d741d683c5548b0 513 SMART SM00267 346 512 7.7E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Gene3D G3DSA:3.40.50.300 131 314 1.1E-60 T 11-10-2018 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Gene3D G3DSA:1.10.8.60 315 379 4.2E-20 T 11-10-2018 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 SMART SM00382 164 307 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 SUPERFAMILY SSF46689 389 440 6.87E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Gene3D G3DSA:1.10.10.60 386 442 9.3E-14 T 11-10-2018 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.5E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Gene3D G3DSA:3.40.50.2300 1 130 3.8E-35 T 11-10-2018 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 SMART SM00448 2 114 7.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 SUPERFAMILY SSF52172 2 188 1.85E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Pfam PF00072 Response regulator receiver domain 4 114 2.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 4.2E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_14235 34af7e69d04757fa9acb1f9edbe749d6 445 SUPERFAMILY SSF52540 144 373 4.48E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03105 add33b35f76db44c3749a867efe51ee6 451 SUPERFAMILY SSF55874 322 443 2.49E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_03105 add33b35f76db44c3749a867efe51ee6 451 Pfam PF17200 Single Cache domain 2 45 192 3.0E-42 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_03105 add33b35f76db44c3749a867efe51ee6 451 PIRSF PIRSF037314 1 451 2.6E-188 T 11-10-2018 IPR017171 Signal transduction histidine kinase, MctS AL538_03105 add33b35f76db44c3749a867efe51ee6 451 Gene3D G3DSA:3.30.450.20 28 203 1.4E-47 T 11-10-2018 AL538_03105 add33b35f76db44c3749a867efe51ee6 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 3.1E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_03105 add33b35f76db44c3749a867efe51ee6 451 SMART SM01049 42 133 1.1E-33 T 11-10-2018 IPR033480 Single Cache domain 2 AL538_03105 add33b35f76db44c3749a867efe51ee6 451 Pfam PF07730 Histidine kinase 250 315 6.6E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL538_03105 add33b35f76db44c3749a867efe51ee6 451 SMART SM00387 353 447 1.6E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_03105 add33b35f76db44c3749a867efe51ee6 451 Gene3D G3DSA:3.30.565.10 313 447 3.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Pfam PF00270 DEAD/DEAH box helicase 30 195 1.9E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.724 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 SMART SM00487 25 223 1.7E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 SUPERFAMILY SSF52540 74 361 2.76E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 SMART SM00490 259 340 1.3E-34 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Pfam PF03880 DbpA RNA binding domain 475 542 5.8E-16 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Gene3D G3DSA:3.40.50.300 215 434 2.0E-53 T 11-10-2018 AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Gene3D G3DSA:3.30.70.330 476 545 1.4E-9 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL538_25490 d571b69bdf9e3b19a23f5837d24e2037 643 Gene3D G3DSA:3.40.50.300 1 211 4.3E-74 T 11-10-2018 AL538_16000 576034449b4f3263229a1705530bc437 343 SUPERFAMILY SSF111369 47 264 1.83E-31 T 11-10-2018 AL538_16000 576034449b4f3263229a1705530bc437 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 9.1E-85 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_16000 576034449b4f3263229a1705530bc437 343 Gene3D G3DSA:2.40.50.100 56 188 2.1E-74 T 11-10-2018 AL538_16000 576034449b4f3263229a1705530bc437 343 Gene3D G3DSA:1.10.287.470 90 149 2.1E-74 T 11-10-2018 AL538_16000 576034449b4f3263229a1705530bc437 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 251 1.6E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_16000 576034449b4f3263229a1705530bc437 343 Gene3D G3DSA:2.40.420.20 35 334 2.1E-74 T 11-10-2018 AL538_16000 576034449b4f3263229a1705530bc437 343 Gene3D G3DSA:2.40.30.170 41 267 2.1E-74 T 11-10-2018 AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 4.0E-22 T 11-10-2018 IPR011491 Flagellar hook protein FlgE AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 1.9E-95 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 Pfam PF00460 Flagella basal body rod protein 3 32 6.3E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 3.7E-16 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 SUPERFAMILY SSF117143 78 398 7.59E-69 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL538_13450 1a7b4df0d1dd0c8a5f0b6b67e8d5df7b 437 Gene3D G3DSA:2.60.98.20 154 318 3.0E-22 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily AL538_00830 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_00830 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_00830 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 172 8.8E-66 T 11-10-2018 AL538_00830 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_00830 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 Gene3D G3DSA:1.10.357.10 1 193 3.2E-59 T 11-10-2018 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.0E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 SUPERFAMILY SSF48498 80 192 4.45E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 SUPERFAMILY SSF46689 2 74 7.7E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22060 de278e60d1ec714eaaf49db63f0197d9 195 Pfam PF16925 Bacterial transcriptional repressor C-terminal 102 183 1.2E-8 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL538_10170 9b6b1523ffd7cb1975fd5bb7303a01d6 334 SUPERFAMILY SSF51556 3 325 2.35E-75 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_10170 9b6b1523ffd7cb1975fd5bb7303a01d6 334 Gene3D G3DSA:3.20.20.140 1 334 9.2E-97 T 11-10-2018 AL538_10170 9b6b1523ffd7cb1975fd5bb7303a01d6 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 7.7E-90 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AL538_10170 9b6b1523ffd7cb1975fd5bb7303a01d6 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.912 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 AL538_10170 9b6b1523ffd7cb1975fd5bb7303a01d6 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 1.2E-120 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AL538_17975 d6175f23bf7db8c22861cf3d8739a8b7 224 Gene3D G3DSA:3.20.20.70 1 220 5.0E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17975 d6175f23bf7db8c22861cf3d8739a8b7 224 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 211 4.3E-44 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_17975 d6175f23bf7db8c22861cf3d8739a8b7 224 SUPERFAMILY SSF51569 3 216 1.57E-61 T 11-10-2018 AL538_17975 d6175f23bf7db8c22861cf3d8739a8b7 224 ProSitePatterns PS01054 Transaldolase signature 1. 25 33 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 SUPERFAMILY SSF51905 3 382 2.59E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 1.8E-125 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 Gene3D G3DSA:3.50.50.60 5 336 1.3E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.3E-10 T 11-10-2018 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.3E-10 T 11-10-2018 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.3E-10 T 11-10-2018 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.3E-10 T 11-10-2018 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 5.2E-149 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 Gene3D G3DSA:3.30.9.50 81 270 1.3E-95 T 11-10-2018 AL538_06865 269ce4d4c5c0575dae4e0f3092039abf 392 Pfam PF01494 FAD binding domain 4 337 5.1E-24 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL538_21610 b100ee492690be4d9df47796f68a177d 286 SUPERFAMILY SSF48452 172 257 3.36E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_21610 b100ee492690be4d9df47796f68a177d 286 Gene3D G3DSA:1.25.40.10 97 265 7.3E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_21610 b100ee492690be4d9df47796f68a177d 286 SMART SM00028 186 219 3.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_21610 b100ee492690be4d9df47796f68a177d 286 SMART SM00028 220 253 0.0093 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SMART SM00852 14 158 4.7E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.4E-84 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.6E-33 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 Gene3D G3DSA:3.40.980.10 2 170 2.6E-51 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 4.1E-36 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 PIRSF PIRSF006443 1 166 5.5E-66 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 SUPERFAMILY SSF53218 7 168 6.15E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_04105 71410dfe8b9ef7eb5f7657d4e5df55e2 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 9.4E-177 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 SUPERFAMILY SSF69336 1214 1465 2.09E-87 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 SUPERFAMILY SSF51395 434 1191 3.25E-249 T 11-10-2018 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Gene3D G3DSA:2.160.20.60 1200 1468 1.5E-101 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Pfam PF04898 Glutamate synthase central domain 458 738 6.8E-102 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Pfam PF01493 GXGXG motif 1236 1419 1.2E-73 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 SUPERFAMILY SSF56235 13 429 9.26E-149 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 5.5E-152 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL538_11750 16abc4babf440254f3dc5d789d9f34c4 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 Gene3D G3DSA:1.10.10.10 5 91 6.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_27025 d9fd7db049a145437eda09941d10cc70 299 SUPERFAMILY SSF46785 5 111 1.28E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_27025 d9fd7db049a145437eda09941d10cc70 299 SUPERFAMILY SSF53850 92 296 2.17E-38 T 11-10-2018 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.7E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_27025 d9fd7db049a145437eda09941d10cc70 299 Pfam PF03466 LysR substrate binding domain 91 296 2.8E-32 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_27025 d9fd7db049a145437eda09941d10cc70 299 Gene3D G3DSA:3.40.190.290 93 297 7.2E-57 T 11-10-2018 AL538_18520 8f7f4aee1e273e3f503ffdf908b468c4 615 Gene3D G3DSA:1.10.1370.20 320 499 2.3E-10 T 11-10-2018 AL538_18520 8f7f4aee1e273e3f503ffdf908b468c4 615 Gene3D G3DSA:1.10.1370.30 23 307 1.2E-7 T 11-10-2018 AL538_18520 8f7f4aee1e273e3f503ffdf908b468c4 615 SUPERFAMILY SSF55486 3 550 1.63E-73 T 11-10-2018 AL538_18520 8f7f4aee1e273e3f503ffdf908b468c4 615 Pfam PF01432 Peptidase family M3 283 540 1.9E-17 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL538_19320 94e49acd7e7c732daa14225ef2686003 261 PIRSF PIRSF028205 1 258 7.9E-116 T 11-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 AL538_19320 94e49acd7e7c732daa14225ef2686003 261 Gene3D G3DSA:2.50.20.10 28 255 4.1E-40 T 11-10-2018 AL538_19320 94e49acd7e7c732daa14225ef2686003 261 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 254 5.1E-37 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL538_17335 44156b7561c319f346281a5648dc7fcf 308 Gene3D G3DSA:2.40.440.10 27 306 1.5E-86 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL538_17335 44156b7561c319f346281a5648dc7fcf 308 SUPERFAMILY SSF54106 47 91 3.01E-7 T 11-10-2018 AL538_17335 44156b7561c319f346281a5648dc7fcf 308 Pfam PF03734 L,D-transpeptidase catalytic domain 103 238 2.5E-23 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL538_17335 44156b7561c319f346281a5648dc7fcf 308 SUPERFAMILY SSF141523 100 238 8.11E-31 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL538_17335 44156b7561c319f346281a5648dc7fcf 308 SMART SM00257 47 91 3.4E-4 T 11-10-2018 IPR018392 LysM domain AL538_17335 44156b7561c319f346281a5648dc7fcf 308 Pfam PF01476 LysM domain 48 91 1.1E-7 T 11-10-2018 IPR018392 LysM domain AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 1.3E-32 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.3E-45 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 9.2E-116 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 SUPERFAMILY SSF117143 93 222 2.35E-36 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 2.7E-27 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_21055 90aa5bcd5c6105e664843a4c54d6aa7f 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_16365 59ab2e517da0dacf302ca52993fd9c63 316 SMART SM00530 5 68 3.3E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_16365 59ab2e517da0dacf302ca52993fd9c63 316 Gene3D G3DSA:1.10.260.40 1 66 8.4E-12 T 11-10-2018 AL538_16365 59ab2e517da0dacf302ca52993fd9c63 316 Pfam PF01381 Helix-turn-helix 6 65 2.4E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_16365 59ab2e517da0dacf302ca52993fd9c63 316 SUPERFAMILY SSF47413 1 71 1.23E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Pfam PF00672 HAMP domain 300 346 3.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Gene3D G3DSA:3.30.450.20 48 268 4.6E-55 T 11-10-2018 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Gene3D G3DSA:3.30.450.20 60 168 4.6E-55 T 11-10-2018 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Gene3D G3DSA:1.10.287.950 297 627 2.8E-72 T 11-10-2018 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 6.8E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 6.8E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 6.8E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 SMART SM00304 353 403 5.3 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 SMART SM00304 296 350 6.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Pfam PF02743 Cache domain 40 258 1.7E-33 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 593 3.3E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 SMART SM00283 365 626 2.7E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 SUPERFAMILY SSF103190 89 175 6.54E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_03085 6afbccd897b962fbcaeed8e5ef3e90d9 627 SUPERFAMILY SSF58104 318 627 6.8E-76 T 11-10-2018 AL538_26640 ef924cf041c658563563877592131785 423 SMART SM01119 314 410 4.3E-31 T 11-10-2018 IPR026956 D-serine dehydratase-like domain AL538_26640 ef924cf041c658563563877592131785 423 Gene3D G3DSA:3.20.20.10 54 284 2.2E-135 T 11-10-2018 IPR029066 PLP-binding barrel AL538_26640 ef924cf041c658563563877592131785 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 259 9.4E-16 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_26640 ef924cf041c658563563877592131785 423 Pfam PF14031 Putative serine dehydratase domain 314 408 4.0E-14 T 11-10-2018 IPR026956 D-serine dehydratase-like domain AL538_26640 ef924cf041c658563563877592131785 423 SUPERFAMILY SSF51419 52 283 1.59E-32 T 11-10-2018 IPR029066 PLP-binding barrel AL538_26640 ef924cf041c658563563877592131785 423 Gene3D G3DSA:2.40.37.20 38 423 2.2E-135 T 11-10-2018 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 SUPERFAMILY SSF58104 369 668 6.67E-58 T 11-10-2018 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 632 3.2E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 Gene3D G3DSA:1.10.287.950 339 668 2.3E-57 T 11-10-2018 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 SMART SM00283 405 667 2.4E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 1.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 1.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_00520 8cf1bc6f13404822cc40c11a8b4fb057 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 1.2E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_17435 69c10ba9bf8dd6ab72aef81e38847a19 91 Pfam PF14542 GCN5-related N-acetyl-transferase 15 89 3.3E-21 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AL538_17435 69c10ba9bf8dd6ab72aef81e38847a19 91 Gene3D G3DSA:3.40.630.30 2 91 4.9E-22 T 11-10-2018 AL538_17435 69c10ba9bf8dd6ab72aef81e38847a19 91 SUPERFAMILY SSF55729 2 90 5.25E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 Gene3D G3DSA:3.30.1330.60 69 206 6.1E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 SUPERFAMILY SSF103088 90 203 1.01E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 PRINTS PR01021 OMPA domain signature 148 164 7.1E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 PRINTS PR01021 OMPA domain signature 103 125 7.1E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 PRINTS PR01021 OMPA domain signature 133 148 7.1E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_22775 bec6b5e34c0ddc6b07b09f65dddd916f 207 Pfam PF00691 OmpA family 103 197 3.3E-16 T 11-10-2018 IPR006665 OmpA-like domain AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 0.0012 T 11-10-2018 AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 Gene3D G3DSA:3.40.50.720 1 239 1.9E-81 T 11-10-2018 AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 2.1E-61 T 11-10-2018 AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 SUPERFAMILY SSF51735 4 238 2.57E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27065 76dd9c898340a091cf5bff4e1abc902d 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13120 0ee350793bdf0ef41bc66f1ee8606c25 365 SUPERFAMILY SSF52540 119 320 2.17E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13120 0ee350793bdf0ef41bc66f1ee8606c25 365 Gene3D G3DSA:3.40.50.300 117 323 4.0E-73 T 11-10-2018 AL538_13120 0ee350793bdf0ef41bc66f1ee8606c25 365 Pfam PF02562 PhoH-like protein 120 323 1.7E-94 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AL538_01720 906079e4cf998e2f25bab5f0defa0bdb 171 Gene3D G3DSA:2.60.20.10 80 170 1.3E-16 T 11-10-2018 AL538_01720 906079e4cf998e2f25bab5f0defa0bdb 171 SUPERFAMILY SSF49695 90 169 1.12E-12 T 11-10-2018 IPR011024 Gamma-crystallin-like AL538_01720 906079e4cf998e2f25bab5f0defa0bdb 171 Pfam PF00030 Beta/Gamma crystallin 92 169 7.2E-7 T 11-10-2018 IPR001064 Beta/gamma crystallin AL538_01720 906079e4cf998e2f25bab5f0defa0bdb 171 SMART SM00247 91 169 0.0048 T 11-10-2018 IPR001064 Beta/gamma crystallin AL538_15265 827c882d6549c6a0e4f495b8e34c284e 112 Gene3D G3DSA:1.25.40.10 2 111 3.3E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_15265 827c882d6549c6a0e4f495b8e34c284e 112 PIRSF PIRSF017117 1 110 1.4E-41 T 11-10-2018 IPR016684 Type III secretion system chaperone, YscY AL538_15265 827c882d6549c6a0e4f495b8e34c284e 112 SUPERFAMILY SSF48452 5 109 8.86E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_15265 827c882d6549c6a0e4f495b8e34c284e 112 Pfam PF14559 Tetratricopeptide repeat 19 73 2.3E-8 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 Gene3D G3DSA:3.30.390.120 314 376 5.2E-8 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 Gene3D G3DSA:3.50.50.60 6 278 3.2E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.0E-12 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 1.0E-12 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 1.0E-12 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 1.0E-12 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 SUPERFAMILY SSF51905 2 187 1.46E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 Gene3D G3DSA:3.50.50.60 108 242 3.2E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 284 3.3E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 SUPERFAMILY SSF51905 144 303 5.7E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.7E-20 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.7E-20 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.7E-20 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.7E-20 T 11-10-2018 AL538_21965 eef482e1da22f92ae411390ffcd3ea7e 382 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 1.7E-20 T 11-10-2018 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 Gene3D G3DSA:3.30.1490.20 102 163 1.4E-16 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 Gene3D G3DSA:3.30.470.20 164 375 4.2E-73 T 11-10-2018 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 3.9E-106 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 SUPERFAMILY SSF52440 1 88 1.73E-16 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 Pfam PF02222 ATP-grasp domain 101 274 1.9E-51 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 SUPERFAMILY SSF56059 92 295 5.66E-56 T 11-10-2018 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.854 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 Gene3D G3DSA:3.40.50.20 1 80 3.2E-18 T 11-10-2018 AL538_09430 e12946f118d93b68be1c7a6e7f560077 377 SUPERFAMILY SSF51246 299 373 2.28E-19 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL538_15550 6d10101e091f0d4b6ea7cbc6a5ee50e2 310 Pfam PF00294 pfkB family carbohydrate kinase 5 302 5.1E-55 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_15550 6d10101e091f0d4b6ea7cbc6a5ee50e2 310 SUPERFAMILY SSF53613 1 301 3.59E-74 T 11-10-2018 IPR029056 Ribokinase-like AL538_15550 6d10101e091f0d4b6ea7cbc6a5ee50e2 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_15550 6d10101e091f0d4b6ea7cbc6a5ee50e2 310 Gene3D G3DSA:3.40.1190.20 2 307 1.8E-80 T 11-10-2018 IPR029056 Ribokinase-like AL538_20980 f852fe0fe0c26b437d20a7ac088e01f1 494 Pfam PF07690 Major Facilitator Superfamily 10 423 1.8E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_20980 f852fe0fe0c26b437d20a7ac088e01f1 494 Gene3D G3DSA:1.20.1250.20 7 475 1.7E-61 T 11-10-2018 AL538_20980 f852fe0fe0c26b437d20a7ac088e01f1 494 SUPERFAMILY SSF103473 8 474 4.19E-19 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 SUPERFAMILY SSF52172 5 127 1.85E-25 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 2.8E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 Gene3D G3DSA:1.10.10.10 134 196 2.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 SUPERFAMILY SSF46894 134 193 3.74E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 Gene3D G3DSA:3.40.50.2300 1 133 7.4E-25 T 11-10-2018 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 SMART SM00448 4 117 4.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 Pfam PF00072 Response regulator receiver domain 7 117 2.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23545 387135322cba8b0a5a7bb79e3ac5d236 198 SMART SM00421 139 196 2.0E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_15895 a784252b560797c7cb258d6a3ab1c6c7 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 1.2E-113 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL538_15895 a784252b560797c7cb258d6a3ab1c6c7 286 Gene3D G3DSA:1.20.1080.10 27 280 1.8E-95 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_15895 a784252b560797c7cb258d6a3ab1c6c7 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 4.0E-77 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL538_15895 a784252b560797c7cb258d6a3ab1c6c7 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL538_15895 a784252b560797c7cb258d6a3ab1c6c7 286 Pfam PF01226 Formate/nitrite transporter 14 275 3.4E-74 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL538_21970 b2d9efcbe4a138daafef2aa58c3ec51d 112 PIRSF PIRSF020632 3 112 1.1E-62 T 11-10-2018 IPR014510 Tellurite resistance predicted, YeaR AL538_21970 b2d9efcbe4a138daafef2aa58c3ec51d 112 SUPERFAMILY SSF51197 4 101 2.06E-32 T 11-10-2018 AL538_21970 b2d9efcbe4a138daafef2aa58c3ec51d 112 Gene3D G3DSA:2.60.120.10 1 112 1.0E-47 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_21970 b2d9efcbe4a138daafef2aa58c3ec51d 112 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 4.4E-26 T 11-10-2018 IPR015392 Domain of unknown function DUF1971 AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 Gene3D G3DSA:3.40.50.300 4 200 9.6E-49 T 11-10-2018 AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 177 5.2E-37 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 PIRSF PIRSF005624 1 202 1.3E-47 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 SUPERFAMILY SSF52540 4 196 4.65E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 46.738 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AL538_19180 795d62123fd2b01e3f63dda5c7b6d346 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 5 198 6.5E-102 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 SUPERFAMILY SSF64518 1 375 2.35E-94 T 11-10-2018 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 5.2E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Gene3D G3DSA:1.20.1330.10 44 326 8.8E-77 T 11-10-2018 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Gene3D G3DSA:3.30.70.2120 174 274 8.8E-77 T 11-10-2018 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Gene3D G3DSA:1.10.8.410 327 375 2.8E-20 T 11-10-2018 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Pfam PF07196 Flagellin hook IN motif 194 247 2.8E-9 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_05160 c0fcf2e7d2d5f4f56111afc0979c6000 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PIRSF PIRSF002111 1 534 1.9E-217 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 358 444 1.8E-23 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 363 447 6.27E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 445 528 1.6E-18 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03765 90868c7c1110ba19e394b78e745360da 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 11-10-2018 AL538_03765 90868c7c1110ba19e394b78e745360da 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.6E-230 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 190 260 6.0E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 275 347 1.8E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 103 171 1.2E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 362 434 1.9E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 449 520 1.9E-18 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SMART SM00316 19 87 0.0012 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03765 90868c7c1110ba19e394b78e745360da 556 SUPERFAMILY SSF50249 429 540 8.21E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_19345 ac9a8bba7c487155a4a5c1ff06b517d1 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 270 1.1E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_19345 ac9a8bba7c487155a4a5c1ff06b517d1 349 SUPERFAMILY SSF111369 41 243 1.96E-17 T 11-10-2018 AL538_19345 ac9a8bba7c487155a4a5c1ff06b517d1 349 Gene3D G3DSA:2.40.50.100 42 173 1.9E-19 T 11-10-2018 AL538_19345 ac9a8bba7c487155a4a5c1ff06b517d1 349 Gene3D G3DSA:2.40.30.170 212 328 1.8E-18 T 11-10-2018 AL538_19345 ac9a8bba7c487155a4a5c1ff06b517d1 349 Gene3D G3DSA:1.10.287.470 77 171 1.9E-19 T 11-10-2018 AL538_14135 a1761e638019deb2c164ca16d84ad72c 239 SUPERFAMILY SSF53955 74 190 1.31E-11 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_14135 a1761e638019deb2c164ca16d84ad72c 239 Gene3D G3DSA:1.10.530.10 78 193 1.3E-8 T 11-10-2018 AL538_14135 a1761e638019deb2c164ca16d84ad72c 239 Pfam PF01464 Transglycosylase SLT domain 94 145 5.0E-5 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_00775 b6517272b18b37bf7905b2f7c76a0093 206 Gene3D G3DSA:1.10.760.10 46 206 6.9E-72 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00775 b6517272b18b37bf7905b2f7c76a0093 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 9.3E-82 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL538_00775 b6517272b18b37bf7905b2f7c76a0093 206 SUPERFAMILY SSF46626 21 202 1.43E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_00775 b6517272b18b37bf7905b2f7c76a0093 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 2.3E-81 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL538_19270 e42ef2098b72efb50a156636f71285be 172 Gene3D G3DSA:3.40.1280.10 8 150 9.2E-18 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_19270 e42ef2098b72efb50a156636f71285be 172 Pfam PF00588 SpoU rRNA Methylase family 8 140 7.7E-19 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_19270 e42ef2098b72efb50a156636f71285be 172 SUPERFAMILY SSF75217 6 145 3.99E-26 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 Pfam PF00520 Ion transport protein 24 235 9.2E-31 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 Gene3D G3DSA:1.10.287.70 23 237 2.8E-57 T 11-10-2018 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 SUPERFAMILY SSF81324 22 235 7.07E-53 T 11-10-2018 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 84 104 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 178 200 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 16 44 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 120 146 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 149 172 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 207 233 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_04560 46ec4e6942c5bfa16ee6f0fa087627a0 282 PRINTS PR00169 Potassium channel signature 58 81 1.7E-37 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_27620 3a323b9d751bdc88fce3d696dfd9ae36 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.1E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SUPERFAMILY SSF81301 52 171 4.36E-20 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SUPERFAMILY SSF55021 796 860 3.24E-10 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Pfam PF01909 Nucleotidyltransferase domain 57 109 1.2E-7 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 4.2E-35 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SMART SM00471 447 594 5.0E-10 T 11-10-2018 IPR003607 HD/PDEase domain AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SUPERFAMILY SSF109604 418 588 5.02E-14 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Pfam PF01842 ACT domain 802 848 6.1E-8 T 11-10-2018 IPR002912 ACT domain AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Gene3D G3DSA:1.10.3210.10 435 580 9.4E-9 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SUPERFAMILY SSF55021 689 748 1.23E-8 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 PIRSF PIRSF006288 7 874 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 SUPERFAMILY SSF81593 187 310 2.82E-9 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Pfam PF01966 HD domain 452 584 1.5E-13 T 11-10-2018 IPR006674 HD domain AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Gene3D G3DSA:3.30.70.260 795 873 1.0E-5 T 11-10-2018 AL538_05485 6ebd88f0b17dbbb1d22f9e5a24e57534 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 339.497 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AL538_24595 1a006ed71545988136136c37cf31850e 723 Gene3D G3DSA:2.40.170.20 167 723 1.8E-46 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_24595 1a006ed71545988136136c37cf31850e 723 SUPERFAMILY SSF56935 38 721 2.78E-90 T 11-10-2018 AL538_24595 1a006ed71545988136136c37cf31850e 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 721 3.0E-84 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_24595 1a006ed71545988136136c37cf31850e 723 Pfam PF00593 TonB dependent receptor 248 720 9.8E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_24595 1a006ed71545988136136c37cf31850e 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 154 2.0E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_24595 1a006ed71545988136136c37cf31850e 723 Gene3D G3DSA:2.170.130.10 45 163 1.8E-22 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_08975 140d92c2c0ccb86bec221a9c7e59afb0 106 SMART SM00450 7 102 5.8E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_08975 140d92c2c0ccb86bec221a9c7e59afb0 106 Gene3D G3DSA:3.40.250.10 1 101 2.3E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_08975 140d92c2c0ccb86bec221a9c7e59afb0 106 Pfam PF00581 Rhodanese-like domain 13 98 3.0E-11 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_08975 140d92c2c0ccb86bec221a9c7e59afb0 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.899 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 AL538_08975 140d92c2c0ccb86bec221a9c7e59afb0 106 SUPERFAMILY SSF52821 1 105 9.04E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_21345 069988ec3a01850214f84eb51ce70073 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 2.6E-59 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AL538_21345 069988ec3a01850214f84eb51ce70073 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.1E-23 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_21345 069988ec3a01850214f84eb51ce70073 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.1E-23 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_21345 069988ec3a01850214f84eb51ce70073 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.1E-23 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_21345 069988ec3a01850214f84eb51ce70073 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.1E-23 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_21345 069988ec3a01850214f84eb51ce70073 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 3.1E-61 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_27020 c1be7820889911ec125978ea2b63d9bf 320 Gene3D G3DSA:3.40.50.360 1 189 3.7E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_27020 c1be7820889911ec125978ea2b63d9bf 320 Pfam PF02525 Flavodoxin-like fold 3 173 5.2E-39 T 11-10-2018 IPR003680 Flavodoxin-like fold AL538_27020 c1be7820889911ec125978ea2b63d9bf 320 SUPERFAMILY SSF52218 1 180 1.48E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_27020 c1be7820889911ec125978ea2b63d9bf 320 SUPERFAMILY SSF54427 208 312 1.41E-8 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_01530 722f38d86dea552cc34e54082cce75d3 352 SUPERFAMILY SSF55729 33 117 6.31E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_01530 722f38d86dea552cc34e54082cce75d3 352 SUPERFAMILY SSF52374 148 338 8.76E-25 T 11-10-2018 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 Gene3D G3DSA:3.40.50.620 147 326 1.7E-22 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_01530 722f38d86dea552cc34e54082cce75d3 352 SMART SM00764 149 335 2.2E-118 T 11-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 149 207 6.8E-12 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 Pfam PF08218 Citrate lyase ligase C-terminal domain 149 335 7.1E-78 T 11-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 9 339 7.5E-132 T 11-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 PIRSF PIRSF005751 3 350 5.2E-132 T 11-10-2018 IPR005216 Citrate lyase ligase GO:0008771 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 Gene3D G3DSA:3.40.630.30 10 140 1.2E-8 T 11-10-2018 AL538_01530 722f38d86dea552cc34e54082cce75d3 352 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 338 2.0E-71 T 11-10-2018 AL538_15380 8f2b77ee002d5a3faa0e84465738b012 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 7.3E-66 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_15380 8f2b77ee002d5a3faa0e84465738b012 434 Pfam PF01554 MatE 14 174 4.3E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_15380 8f2b77ee002d5a3faa0e84465738b012 434 Pfam PF01554 MatE 244 396 1.7E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_15380 8f2b77ee002d5a3faa0e84465738b012 434 PIRSF PIRSF006603 4 434 2.0E-50 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_25120 1bf45b62ea9121710a3e3ae23b9cb93d 190 Pfam PF04264 YceI-like domain 25 188 1.8E-15 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL538_25120 1bf45b62ea9121710a3e3ae23b9cb93d 190 SMART SM00867 24 189 7.8E-19 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL538_25120 1bf45b62ea9121710a3e3ae23b9cb93d 190 Gene3D G3DSA:2.40.128.110 21 190 1.9E-44 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL538_25120 1bf45b62ea9121710a3e3ae23b9cb93d 190 SUPERFAMILY SSF101874 24 190 3.01E-24 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL538_25120 1bf45b62ea9121710a3e3ae23b9cb93d 190 PIRSF PIRSF029811 1 190 1.3E-49 T 11-10-2018 IPR027016 Uncharacterised protein with YceI domain AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 Gene3D G3DSA:3.40.50.1360 1 266 1.0E-118 T 11-10-2018 AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 223 7.9E-21 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 7.4E-139 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 SUPERFAMILY SSF100950 1 263 4.28E-103 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_19055 ba15ed495590f7362943aa0c793ded0f 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.724 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 AL538_06175 1d175d022dab761314829b5e476437e4 895 ProSitePatterns PS01176 Initiation factor 2 signature. 845 867 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL538_06175 1d175d022dab761314829b5e476437e4 895 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 894 4.2E-285 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL538_06175 1d175d022dab761314829b5e476437e4 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 369 5.7E-14 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL538_06175 1d175d022dab761314829b5e476437e4 895 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.3E-7 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AL538_06175 1d175d022dab761314829b5e476437e4 895 Gene3D G3DSA:3.40.50.300 391 565 5.9E-70 T 11-10-2018 AL538_06175 1d175d022dab761314829b5e476437e4 895 SUPERFAMILY SSF46955 3 50 2.93E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_06175 1d175d022dab761314829b5e476437e4 895 SUPERFAMILY SSF50447 796 892 1.16E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06175 1d175d022dab761314829b5e476437e4 895 Gene3D G3DSA:3.40.50.10050 689 795 1.9E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AL538_06175 1d175d022dab761314829b5e476437e4 895 Pfam PF00009 Elongation factor Tu GTP binding domain 398 554 4.6E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_06175 1d175d022dab761314829b5e476437e4 895 SUPERFAMILY SSF50447 568 649 3.95E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06175 1d175d022dab761314829b5e476437e4 895 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 398 552 2.5E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_06175 1d175d022dab761314829b5e476437e4 895 SUPERFAMILY SSF52540 393 559 4.34E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06175 1d175d022dab761314829b5e476437e4 895 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.9E-16 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AL538_06175 1d175d022dab761314829b5e476437e4 895 SUPERFAMILY SSF52156 672 801 1.7E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AL538_06175 1d175d022dab761314829b5e476437e4 895 Gene3D G3DSA:3.30.56.50 2 50 2.5E-23 T 11-10-2018 AL538_06175 1d175d022dab761314829b5e476437e4 895 Gene3D G3DSA:2.40.30.10 796 893 1.0E-34 T 11-10-2018 AL538_06175 1d175d022dab761314829b5e476437e4 895 Pfam PF11987 Translation-initiation factor 2 679 784 8.2E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AL538_06175 1d175d022dab761314829b5e476437e4 895 Gene3D G3DSA:2.40.30.10 566 684 2.1E-40 T 11-10-2018 AL538_06175 1d175d022dab761314829b5e476437e4 895 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 892 17.602 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 Pfam PF00005 ABC transporter 369 512 4.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 Pfam PF00664 ABC transporter transmembrane region 25 292 3.5E-42 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 SUPERFAMILY SSF52540 346 580 4.49E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 Gene3D G3DSA:1.20.1560.10 1 334 1.0E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 5.3E-177 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 Gene3D G3DSA:3.40.50.300 341 593 2.0E-64 T 11-10-2018 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 SUPERFAMILY SSF90123 5 330 8.37E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 SMART SM00382 375 594 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16390 5b1e7c10b532276b4dc03a9b0e1ce264 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 5.3E-21 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 8.4E-23 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Gene3D G3DSA:1.10.4030.30 25 271 3.6E-69 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 SUPERFAMILY SSF109998 24 195 3.14E-38 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Gene3D G3DSA:3.10.50.40 274 415 1.0E-38 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 SUPERFAMILY SSF54534 278 380 5.23E-29 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Hamap MF_01183 Chaperone SurA [surA]. 7 423 31.901 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 SUPERFAMILY SSF54534 172 270 5.69E-25 T 11-10-2018 AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Pfam PF09312 SurA N-terminal domain 24 141 2.1E-43 T 11-10-2018 IPR015391 SurA N-terminal AL538_11205 fbc8337f1299c9ee4dcd7c0ae0925efc 427 Gene3D G3DSA:3.10.50.40 171 270 3.6E-69 T 11-10-2018 AL538_03915 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_03915 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_03915 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_03915 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL538_14535 3259746905a0268f29141a2ac72e35b5 130 Gene3D G3DSA:2.60.40.3230 18 130 3.9E-28 T 11-10-2018 IPR038483 YcfL-like superfamily AL538_14535 3259746905a0268f29141a2ac72e35b5 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.3E-29 T 11-10-2018 IPR010824 Protein of unknown function DUF1425 AL538_01570 606a008e6cc4a35c928e4d8451549a66 119 SUPERFAMILY SSF46785 6 77 4.57E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 Gene3D G3DSA:3.30.70.580 62 228 3.8E-56 T 11-10-2018 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 Gene3D G3DSA:3.30.70.1560 127 210 3.8E-56 T 11-10-2018 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 Pfam PF01479 S4 domain 1 46 7.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.6E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 SMART SM00363 1 59 2.4E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 Gene3D G3DSA:3.10.290.10 1 61 1.9E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 SUPERFAMILY SSF55120 60 228 8.48E-44 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 SUPERFAMILY SSF55174 1 86 2.94E-13 T 11-10-2018 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_16200 a722f15677a1eb31edce6e6cc16f8883 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 3.8E-49 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_14340 b48905891243ec4409689e8b0d884f62 294 Gene3D G3DSA:3.40.190.10 103 288 9.1E-41 T 11-10-2018 AL538_14340 b48905891243ec4409689e8b0d884f62 294 Pfam PF03466 LysR substrate binding domain 92 291 1.8E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_14340 b48905891243ec4409689e8b0d884f62 294 SUPERFAMILY SSF46785 8 83 2.6E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14340 b48905891243ec4409689e8b0d884f62 294 Gene3D G3DSA:1.10.10.10 6 92 3.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14340 b48905891243ec4409689e8b0d884f62 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_14340 b48905891243ec4409689e8b0d884f62 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_14340 b48905891243ec4409689e8b0d884f62 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_14340 b48905891243ec4409689e8b0d884f62 294 SUPERFAMILY SSF53850 92 293 5.79E-31 T 11-10-2018 AL538_14340 b48905891243ec4409689e8b0d884f62 294 Gene3D G3DSA:3.40.190.10 163 262 9.1E-41 T 11-10-2018 AL538_14340 b48905891243ec4409689e8b0d884f62 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 Pfam PF00691 OmpA family 107 200 4.0E-22 T 11-10-2018 IPR006665 OmpA-like domain AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 SUPERFAMILY SSF103088 101 205 1.57E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 PRINTS PR01021 OMPA domain signature 151 167 1.2E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 PRINTS PR01021 OMPA domain signature 136 151 1.2E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 PRINTS PR01021 OMPA domain signature 107 129 1.2E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_25965 7a2db65895942aec1df0a62f3e8ba21d 226 Gene3D G3DSA:3.30.1330.60 73 214 4.8E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_06400 74e80fc8041803449a01422a3749b423 238 Gene3D G3DSA:3.40.1350.60 81 237 1.9E-54 T 11-10-2018 AL538_06400 74e80fc8041803449a01422a3749b423 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 228 8.8E-78 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL538_06400 74e80fc8041803449a01422a3749b423 238 Pfam PF03749 Sugar fermentation stimulation protein 13 230 5.7E-76 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL538_06400 74e80fc8041803449a01422a3749b423 238 Gene3D G3DSA:2.40.50.580 1 80 1.2E-28 T 11-10-2018 AL538_06400 74e80fc8041803449a01422a3749b423 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.859 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein AL538_17685 7ed327d8667003b038c1471a4103033b 129 SUPERFAMILY SSF54593 1 128 2.69E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_17685 7ed327d8667003b038c1471a4103033b 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 2.7E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_17685 7ed327d8667003b038c1471a4103033b 129 Gene3D G3DSA:3.10.180.10 1 129 6.1E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_24905 813704e1fd96ebbf1ace67cfa4126f96 373 Pfam PF06812 ImpA, N-terminal, type VI secretion system 15 144 1.7E-30 T 11-10-2018 IPR010657 ImpA, N-terminal AL538_24905 813704e1fd96ebbf1ace67cfa4126f96 373 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 366 1.5E-79 T 11-10-2018 IPR017740 Type VI secretion system-associated, ImpA AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 SUPERFAMILY SSF55486 4 576 1.69E-94 T 11-10-2018 AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 Gene3D G3DSA:1.10.1370.20 219 598 8.4E-110 T 11-10-2018 AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 Pfam PF08439 Oligopeptidase F 106 174 2.7E-11 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 Gene3D G3DSA:1.20.140.70 21 169 4.9E-11 T 11-10-2018 AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 Pfam PF01432 Peptidase family M3 335 580 1.8E-23 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL538_01935 f05ead3f73e1450e6f2ac15963aa6110 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 2.6E-202 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AL538_10495 c883c00678ad64fc5aa48b67c8e59306 213 Gene3D G3DSA:3.40.50.2020 1 213 8.8E-80 T 11-10-2018 AL538_10495 c883c00678ad64fc5aa48b67c8e59306 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.261 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_10495 c883c00678ad64fc5aa48b67c8e59306 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.4E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL538_10495 c883c00678ad64fc5aa48b67c8e59306 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 8.4E-70 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_10495 c883c00678ad64fc5aa48b67c8e59306 213 SUPERFAMILY SSF53271 2 212 2.13E-50 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-276 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 SUPERFAMILY SSF53795 230 541 7.98E-128 T 11-10-2018 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 6.3E-212 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 SUPERFAMILY SSF68923 11 228 7.5E-89 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 Gene3D G3DSA:2.170.8.10 49 351 1.5E-236 T 11-10-2018 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 Gene3D G3DSA:3.40.449.10 25 235 1.5E-236 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.346 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 Gene3D G3DSA:3.90.228.20 236 526 1.5E-236 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL538_10235 b7cebf6d0abc4b99690117af59401fa7 542 PIRSF PIRSF006294 4 541 1.5E-228 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AL538_03005 658bf4cab12936636f03488f2313ec32 571 SMART SM00052 345 571 5.4E-17 T 11-10-2018 IPR001633 EAL domain AL538_03005 658bf4cab12936636f03488f2313ec32 571 SUPERFAMILY SSF141868 357 567 4.71E-48 T 11-10-2018 IPR035919 EAL domain superfamily AL538_03005 658bf4cab12936636f03488f2313ec32 571 Pfam PF00563 EAL domain 358 567 3.1E-40 T 11-10-2018 IPR001633 EAL domain AL538_03005 658bf4cab12936636f03488f2313ec32 571 Gene3D G3DSA:3.20.20.450 347 569 3.2E-46 T 11-10-2018 IPR035919 EAL domain superfamily AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:3.40.50.300 213 408 1.8E-60 T 11-10-2018 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00271 Helicase conserved C-terminal domain 229 333 4.7E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00956 414 517 1.7E-49 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 11-10-2018 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00490 253 334 9.3E-29 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF52540 211 458 1.42E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:1.10.10.10 409 519 5.6E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.9E-187 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SUPERFAMILY SSF52540 17 202 8.88E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 6.6E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.9E-251 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF09382 RQC domain 409 517 2.6E-35 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Gene3D G3DSA:3.40.50.300 7 211 1.3E-80 T 11-10-2018 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 Pfam PF16124 RecQ zinc-binding 346 407 4.6E-18 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00341 533 611 2.1E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AL538_09245 cdc3395999d9e64ebcbc79e97b21bc66 611 SMART SM00487 25 221 1.1E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_23970 3c519b041d4aee43ea544febcba144fe 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 5.8E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_23970 3c519b041d4aee43ea544febcba144fe 265 SUPERFAMILY SSF161098 60 245 2.35E-45 T 11-10-2018 IPR035906 MetI-like superfamily AL538_23970 3c519b041d4aee43ea544febcba144fe 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 3.0E-26 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_23970 3c519b041d4aee43ea544febcba144fe 265 Gene3D G3DSA:1.10.3720.10 49 260 2.0E-53 T 11-10-2018 IPR035906 MetI-like superfamily AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 1.4E-66 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 SUPERFAMILY SSF46955 4 124 2.09E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.7E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.7E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.7E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 SMART SM00422 3 71 5.5E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 Pfam PF09278 MerR, DNA binding 45 109 9.6E-17 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_21600 d8292a1e7997c3a1027efd7817ccdb7d 143 Gene3D G3DSA:1.10.1660.10 1 126 5.3E-32 T 11-10-2018 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Pfam PF08180 B melanoma antigen family 9 36 1.8E-15 T 11-10-2018 IPR012530 B melanoma antigen-like AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 547 2.3E-113 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Pfam PF03572 Peptidase family S41 356 525 2.9E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 SMART SM00228 246 323 7.7E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 SMART SM00245 326 527 1.3E-62 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 SUPERFAMILY SSF52096 166 531 1.01E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 662 9.4E-39 T 11-10-2018 IPR020992 Tail specific protease, C-terminal AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Gene3D G3DSA:3.90.226.10 324 544 1.9E-57 T 11-10-2018 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 319 6.5E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 SUPERFAMILY SSF50156 217 336 3.51E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_00885 9b8a3bf8a7ad64d568a5b56ee14f6f63 664 Gene3D G3DSA:2.30.42.10 236 320 6.4E-12 T 11-10-2018 AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.103 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.5E-51 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.6E-31 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 11-10-2018 AL538_10920 dc8e1b2b869c12c3d75eecb65f278b23 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 1.4E-109 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.214 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 SUPERFAMILY SSF102114 27 118 1.16E-5 T 11-10-2018 AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 Gene3D G3DSA:3.20.20.70 1 222 2.0E-52 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 PIRSF PIRSF000370 1 222 3.6E-69 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AL538_17065 087a6e0144dfdbbbdee7fa1c447de13e 222 Pfam PF13394 4Fe-4S single cluster domain 23 126 2.8E-10 T 11-10-2018 AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 3.7E-45 T 11-10-2018 IPR012660 Thioesterase, putative AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 Pfam PF13673 Acetyltransferase (GNAT) domain 63 144 1.9E-11 T 11-10-2018 IPR000182 GNAT domain AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 Gene3D G3DSA:3.10.129.10 147 298 1.6E-47 T 11-10-2018 AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 SUPERFAMILY SSF55729 2 155 1.44E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 SUPERFAMILY SSF54637 154 296 4.71E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 3.6E-52 T 11-10-2018 IPR012660 Thioesterase, putative AL538_10225 4ed954a8089080fa7e7dc1707f315a64 305 Gene3D G3DSA:3.40.630.30 3 145 9.0E-28 T 11-10-2018 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.762 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 Gene3D G3DSA:1.10.150.130 14 108 4.1E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 SUPERFAMILY SSF56349 116 302 1.62E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 SUPERFAMILY SSF47823 16 107 5.3E-12 T 11-10-2018 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 Gene3D G3DSA:1.10.443.10 121 298 1.7E-56 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 3.6E-108 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 Pfam PF00589 Phage integrase family 122 290 1.6E-48 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_09110 053dd2efa074a3a7f0c44894c01bce4f 313 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 8.1E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL538_23455 cad8d1fec981d3abf52095302726a03f 406 Gene3D G3DSA:1.10.10.10 9 80 7.6E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23455 cad8d1fec981d3abf52095302726a03f 406 Gene3D G3DSA:3.30.420.40 212 359 3.1E-51 T 11-10-2018 AL538_23455 cad8d1fec981d3abf52095302726a03f 406 Gene3D G3DSA:3.30.420.40 120 211 3.1E-51 T 11-10-2018 AL538_23455 cad8d1fec981d3abf52095302726a03f 406 Pfam PF12802 MarR family 25 67 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_23455 cad8d1fec981d3abf52095302726a03f 406 SUPERFAMILY SSF46785 19 73 1.18E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23455 cad8d1fec981d3abf52095302726a03f 406 SUPERFAMILY SSF53067 91 363 5.99E-31 T 11-10-2018 AL538_23455 cad8d1fec981d3abf52095302726a03f 406 Pfam PF00480 ROK family 99 396 3.2E-37 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_18930 4364a4af3961480665e25443c777e6d5 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_18930 4364a4af3961480665e25443c777e6d5 284 Gene3D G3DSA:3.20.20.70 2 284 1.1E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_18930 4364a4af3961480665e25443c777e6d5 284 SUPERFAMILY SSF51569 3 283 1.9E-100 T 11-10-2018 AL538_18930 4364a4af3961480665e25443c777e6d5 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 5.2E-101 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_18930 4364a4af3961480665e25443c777e6d5 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 3.7E-99 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_18930 4364a4af3961480665e25443c777e6d5 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 1.3E-148 T 11-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AL538_18930 4364a4af3961480665e25443c777e6d5 284 PIRSF PIRSF001359 1 284 3.5E-110 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF52540 18 235 2.32E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.899 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50447 242 324 5.3E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 1.9E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 233 3.3E-45 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:3.40.50.300 6 239 1.1E-71 T 11-10-2018 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 SUPERFAMILY SSF50465 332 434 5.76E-30 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 5.2E-199 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 331 434 3.6E-29 T 11-10-2018 AL538_11010 d318c3f903e96c0876765cd13d1c919d 476 Gene3D G3DSA:2.40.30.10 242 327 6.1E-27 T 11-10-2018 AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 SUPERFAMILY SSF53850 92 301 1.23E-31 T 11-10-2018 AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 Gene3D G3DSA:1.10.10.10 3 89 2.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 Gene3D G3DSA:3.40.190.10 92 299 6.0E-38 T 11-10-2018 AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 SUPERFAMILY SSF46785 6 86 3.2E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 Pfam PF03466 LysR substrate binding domain 98 304 9.8E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.0E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16515 8766e1d36d620a77e1c45e1820fa36bc 318 Gene3D G3DSA:3.40.190.10 177 275 6.0E-38 T 11-10-2018 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 Gene3D G3DSA:3.20.70.20 78 742 9.6E-156 T 11-10-2018 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.3E-11 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.3E-120 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.7E-174 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.1E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 SUPERFAMILY SSF51998 222 738 2.99E-164 T 11-10-2018 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 SUPERFAMILY SSF48168 10 221 3.66E-74 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03240 11d86542b3289bd4c89aaa82f0c2eef0 760 Pfam PF03477 ATP cone domain 6 92 1.6E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL538_06585 8c3b42cc44aa3ca4fc8334a0863dd49a 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 220.715 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL538_06585 8c3b42cc44aa3ca4fc8334a0863dd49a 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 9.9E-168 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL538_06585 8c3b42cc44aa3ca4fc8334a0863dd49a 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 1.3E-208 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL538_06585 8c3b42cc44aa3ca4fc8334a0863dd49a 522 SUPERFAMILY SSF55931 4 513 1.24E-200 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL538_06585 8c3b42cc44aa3ca4fc8334a0863dd49a 522 Gene3D G3DSA:3.30.590.20 17 522 4.5E-192 T 11-10-2018 AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 Pfam PF01769 Divalent cation transporter 319 440 1.7E-22 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 Gene3D G3DSA:3.10.580.10 133 258 2.1E-33 T 11-10-2018 AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 Gene3D G3DSA:1.10.357.20 274 447 1.0E-45 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 Pfam PF03448 MgtE intracellular N domain 35 135 1.3E-14 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 SUPERFAMILY SSF54631 139 272 7.58E-13 T 11-10-2018 AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 SUPERFAMILY SSF161093 276 446 3.27E-46 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 SMART SM00924 34 137 7.8E-14 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL538_22445 e1833cf8c227d979e5ff7c478158941d 448 SUPERFAMILY SSF158791 33 134 1.96E-14 T 11-10-2018 AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 Gene3D G3DSA:3.40.190.290 92 287 1.6E-69 T 11-10-2018 AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 Pfam PF03466 LysR substrate binding domain 88 288 7.7E-49 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 Gene3D G3DSA:1.10.10.10 3 91 7.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 7.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 SUPERFAMILY SSF53850 89 288 7.78E-49 T 11-10-2018 AL538_18740 9a1d53526670ef890f3dba22cb0933a7 289 SUPERFAMILY SSF46785 4 87 8.79E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05990 d01890712529e4354767f1b2d3617469 484 Pfam PF04972 BON domain 99 153 2.2E-8 T 11-10-2018 IPR007055 BON domain AL538_05990 d01890712529e4354767f1b2d3617469 484 Pfam PF00263 Bacterial type II and III secretion system protein 256 419 1.4E-38 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_05990 d01890712529e4354767f1b2d3617469 484 Pfam PF13629 Pilus formation protein N terminal region 26 95 3.7E-19 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AL538_05990 d01890712529e4354767f1b2d3617469 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 3.7E-11 T 11-10-2018 IPR001775 GspD/PilQ family AL538_05990 d01890712529e4354767f1b2d3617469 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 251 275 3.7E-11 T 11-10-2018 IPR001775 GspD/PilQ family AL538_05990 d01890712529e4354767f1b2d3617469 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 422 3.7E-11 T 11-10-2018 IPR001775 GspD/PilQ family AL538_05990 d01890712529e4354767f1b2d3617469 484 PRINTS PR00811 Bacterial general secretion pathway protein D signature 385 403 3.7E-11 T 11-10-2018 IPR001775 GspD/PilQ family AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 SUPERFAMILY SSF50249 2 63 4.06E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Pfam PF01330 RuvA N terminal domain 2 62 3.8E-21 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Gene3D G3DSA:1.10.150.20 67 143 1.1E-25 T 11-10-2018 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.8E-17 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 SMART SM00278 108 127 0.071 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 SMART SM00278 73 92 540.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.571 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 SUPERFAMILY SSF46929 158 203 8.89E-13 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Gene3D G3DSA:2.40.50.140 1 65 5.5E-28 T 11-10-2018 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 SUPERFAMILY SSF47781 66 136 1.67E-19 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 7.5E-14 T 11-10-2018 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 Gene3D G3DSA:1.10.8.10 157 204 3.2E-24 T 11-10-2018 AL538_14910 5d966ae7b0be2e00e8382591343ce619 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.7E-64 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AL538_20875 92e2f0e81e0ec20ab1c71d663532453a 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.5E-35 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_20875 92e2f0e81e0ec20ab1c71d663532453a 147 Gene3D G3DSA:3.40.930.10 1 147 6.8E-57 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_20875 92e2f0e81e0ec20ab1c71d663532453a 147 SUPERFAMILY SSF55804 1 146 2.88E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_20875 92e2f0e81e0ec20ab1c71d663532453a 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 Gene3D G3DSA:3.30.2350.10 85 316 1.5E-72 T 11-10-2018 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 9.7E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 SMART SM00363 18 83 2.8E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 Gene3D G3DSA:3.10.290.10 2 76 2.9E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 2.4E-105 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 SUPERFAMILY SSF55120 77 316 2.47E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_12115 049e40f28b9bc1acb3bfeeb421acdfe1 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 11-10-2018 AL538_20290 633772ec61ff736da10e2fa604c75c20 316 Gene3D G3DSA:3.40.190.10 109 209 4.3E-72 T 11-10-2018 AL538_20290 633772ec61ff736da10e2fa604c75c20 316 Gene3D G3DSA:3.40.190.10 28 303 4.3E-72 T 11-10-2018 AL538_20290 633772ec61ff736da10e2fa604c75c20 316 SUPERFAMILY SSF53850 29 311 4.18E-49 T 11-10-2018 AL538_20290 633772ec61ff736da10e2fa604c75c20 316 Pfam PF09084 NMT1/THI5 like 37 248 5.2E-70 T 11-10-2018 IPR015168 SsuA/THI5-like AL538_08395 07957371e8a6792cce72c03c18cb8548 483 Pfam PF10415 Fumarase C C-terminus 421 473 3.4E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_08395 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08395 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08395 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08395 07957371e8a6792cce72c03c18cb8548 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08395 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.40.30 421 470 1.6E-28 T 11-10-2018 AL538_08395 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.20.200.10 153 420 5.6E-113 T 11-10-2018 AL538_08395 07957371e8a6792cce72c03c18cb8548 483 SUPERFAMILY SSF48557 14 467 5.89E-144 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_08395 07957371e8a6792cce72c03c18cb8548 483 Gene3D G3DSA:1.10.275.10 16 152 1.2E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_08395 07957371e8a6792cce72c03c18cb8548 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 4.4E-252 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AL538_08395 07957371e8a6792cce72c03c18cb8548 483 Pfam PF00206 Lyase 23 355 1.1E-101 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL538_08395 07957371e8a6792cce72c03c18cb8548 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 SUPERFAMILY SSF81343 1 126 2.83E-52 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 PIRSF PIRSF000180 1 127 1.3E-57 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-54 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Gene3D G3DSA:1.20.1300.10 1 127 2.1E-47 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08275 0d4573e1a65e4a321ebb6a41eb1c8e24 127 Pfam PF02300 Fumarate reductase subunit C 2 126 7.4E-49 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 AL538_23475 14ec5391afac91bf6f30bc06fc29b5e4 399 Gene3D G3DSA:1.20.1250.20 205 391 1.9E-18 T 11-10-2018 AL538_23475 14ec5391afac91bf6f30bc06fc29b5e4 399 Gene3D G3DSA:1.20.1250.20 2 188 4.2E-19 T 11-10-2018 AL538_23475 14ec5391afac91bf6f30bc06fc29b5e4 399 SUPERFAMILY SSF103473 5 386 2.09E-43 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_23475 14ec5391afac91bf6f30bc06fc29b5e4 399 Pfam PF07690 Major Facilitator Superfamily 9 272 2.4E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_04775 b300d75eef051062c64be346e7b10f93 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 4.9E-40 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL538_04775 b300d75eef051062c64be346e7b10f93 109 Gene3D G3DSA:3.30.1310.10 1 109 6.4E-48 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AL538_04775 b300d75eef051062c64be346e7b10f93 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.7E-35 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL538_04775 b300d75eef051062c64be346e7b10f93 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.388 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL538_04775 b300d75eef051062c64be346e7b10f93 109 PIRSF PIRSF004555 3 109 2.3E-40 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AL538_04775 b300d75eef051062c64be346e7b10f93 109 SUPERFAMILY SSF82607 11 103 1.7E-36 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.0E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.0E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.0E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.815 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 Pfam PF01197 Ribosomal protein L31 1 79 8.6E-28 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 Gene3D G3DSA:2.30.170.50 1 84 6.0E-25 T 11-10-2018 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.7E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_05570 63ce56ec1cc7f697a59f95fb816ea052 86 SUPERFAMILY SSF143800 1 81 1.88E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11245 c815d29b8adc9756d1d2b49aad022a4e 262 Pfam PF08239 Bacterial SH3 domain 132 183 8.5E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL538_11245 c815d29b8adc9756d1d2b49aad022a4e 262 Gene3D G3DSA:2.30.30.40 124 187 1.5E-9 T 11-10-2018 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11385 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.6E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 Gene3D G3DSA:3.30.230.70 13 238 4.4E-63 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.5E-111 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.75 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 3.0E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 SUPERFAMILY SSF55666 153 236 5.5E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 SUPERFAMILY SSF54211 1 181 7.09E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_10490 e8617b65ee2b989d3aaafeffde6876f1 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AL538_19080 14243197819788510fe978e148767288 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 267 8.8E-67 T 11-10-2018 AL538_19080 14243197819788510fe978e148767288 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 11-10-2018 AL538_19080 14243197819788510fe978e148767288 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AL538_19080 14243197819788510fe978e148767288 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 2.3E-20 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_19080 14243197819788510fe978e148767288 273 SUPERFAMILY SSF56784 1 270 2.99E-65 T 11-10-2018 IPR036412 HAD-like superfamily AL538_19080 14243197819788510fe978e148767288 273 Gene3D G3DSA:3.40.50.1000 3 267 9.8E-63 T 11-10-2018 IPR023214 HAD superfamily AL538_19080 14243197819788510fe978e148767288 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 267 4.6E-56 T 11-10-2018 IPR000150 Cof family GO:0016787 AL538_19080 14243197819788510fe978e148767288 273 Gene3D G3DSA:3.30.1240.10 82 195 9.8E-63 T 11-10-2018 AL538_04510 d94135b8c0561360bc3325e728e325ca 316 Pfam PF07804 HipA-like C-terminal domain 20 264 1.4E-10 T 11-10-2018 IPR012893 HipA-like, C-terminal AL538_04510 d94135b8c0561360bc3325e728e325ca 316 Gene3D G3DSA:1.10.1070.20 110 314 3.4E-32 T 11-10-2018 AL538_00570 12f3361d88798eb37574b90c513bec33 302 Pfam PF00480 ROK family 2 300 1.3E-71 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_00570 12f3361d88798eb37574b90c513bec33 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.854 T 11-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 AL538_00570 12f3361d88798eb37574b90c513bec33 302 Gene3D G3DSA:3.30.420.40 119 290 2.4E-99 T 11-10-2018 AL538_00570 12f3361d88798eb37574b90c513bec33 302 SUPERFAMILY SSF53067 1 299 2.54E-55 T 11-10-2018 AL538_00570 12f3361d88798eb37574b90c513bec33 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_00570 12f3361d88798eb37574b90c513bec33 302 Gene3D G3DSA:3.30.420.40 4 297 2.4E-99 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Pfam PF00550 Phosphopantetheine attachment site 979 1041 8.2E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Gene3D G3DSA:3.30.559.10 14 209 6.2E-50 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Pfam PF13193 AMP-binding enzyme C-terminal domain 877 953 2.2E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Gene3D G3DSA:3.30.559.30 210 436 4.2E-61 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SUPERFAMILY SSF53474 1047 1309 3.01E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 491 893 1.7E-135 T 11-10-2018 IPR010071 Amino acid adenylation domain AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Gene3D G3DSA:3.40.50.12780 455 863 1.6E-138 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SUPERFAMILY SSF56801 433 991 1.7E-165 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SUPERFAMILY SSF47336 973 1043 2.88E-18 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 ProSitePatterns PS00455 Putative AMP-binding domain signature. 613 624 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Gene3D G3DSA:3.40.50.1820 969 1311 8.0E-98 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1002 1017 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Pfam PF00668 Condensation domain 9 430 1.1E-64 T 11-10-2018 IPR001242 Condensation domain AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SUPERFAMILY SSF52777 193 458 1.45E-39 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Pfam PF00501 AMP-binding enzyme 477 869 3.6E-105 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SUPERFAMILY SSF52777 14 170 5.0E-34 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Gene3D G3DSA:3.30.300.30 864 968 7.8E-35 T 11-10-2018 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 Pfam PF00975 Thioesterase domain 1067 1296 2.7E-29 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AL538_14165 21c48d901cd0984afca968f01b90b1be 1315 SMART SM00823 Phosphopantetheine attachment site 978 1047 0.0018 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AL538_10420 7a7f124bc3e7b42e091c82dc1f691a0a 453 PIRSF PIRSF037714 2 453 5.7E-170 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL538_10420 7a7f124bc3e7b42e091c82dc1f691a0a 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.4E-28 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 Pfam PF13746 4Fe-4S dicluster domain 236 340 1.5E-41 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 288 299 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 57 485 9.4E-174 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 Gene3D G3DSA:2.60.40.10 371 487 3.1E-47 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 SUPERFAMILY SSF54862 121 350 2.69E-32 T 11-10-2018 AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 Pfam PF12801 4Fe-4S binding domain 111 150 2.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_09500 217797725cd034f90a7640d6fc0de5b4 487 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 372 484 1.5E-29 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 Gene3D G3DSA:1.10.10.10 1 92 1.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 SUPERFAMILY SSF53850 89 293 5.97E-30 T 11-10-2018 AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 Pfam PF03466 LysR substrate binding domain 89 291 8.6E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 Gene3D G3DSA:3.40.190.290 93 294 2.0E-22 T 11-10-2018 AL538_17500 d4eb24a22ae4ccd3213fb0c0388d26dd 294 SUPERFAMILY SSF46785 2 109 4.63E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 59.649 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 SUPERFAMILY SSF54373 292 474 3.83E-60 T 11-10-2018 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 533 2.1E-233 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 SUPERFAMILY SSF51905 1 533 1.57E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Gene3D G3DSA:4.10.450.10 38 198 2.6E-175 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 PIRSF PIRSF000137 1 541 8.9E-145 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Gene3D G3DSA:1.10.1220.110 97 150 2.6E-175 T 11-10-2018 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Gene3D G3DSA:3.30.410.40 151 471 2.6E-175 T 11-10-2018 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Gene3D G3DSA:3.50.50.60 5 530 2.6E-175 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Pfam PF05199 GMC oxidoreductase 388 526 3.2E-39 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AL538_25890 18972b4e0d79b29ad6a75c77d8f5be00 569 Pfam PF00732 GMC oxidoreductase 5 297 9.6E-89 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Gene3D G3DSA:3.90.1570.30 186 336 7.0E-27 T 11-10-2018 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 SUPERFAMILY SSF52540 468 740 1.24E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Gene3D G3DSA:3.40.50.300 338 518 2.8E-48 T 11-10-2018 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Pfam PF00271 Helicase conserved C-terminal domain 616 717 4.4E-9 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 208 321 7.0E-8 T 11-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Gene3D G3DSA:3.40.50.300 526 759 2.8E-52 T 11-10-2018 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Pfam PF04851 Type III restriction enzyme, res subunit 356 503 3.0E-34 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 Pfam PF08463 EcoEI R protein C-terminal 967 1110 4.5E-13 T 11-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 SMART SM00487 351 535 6.8E-16 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_21530 a0bdbdf735b284afcd977968e70f69dd 1119 SUPERFAMILY SSF52540 316 523 4.22E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.0E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 Pfam PF00459 Inositol monophosphatase family 2 260 1.8E-64 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 SUPERFAMILY SSF56655 1 259 2.09E-79 T 11-10-2018 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.1E-35 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.1E-35 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.1E-35 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.1E-35 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 Gene3D G3DSA:3.40.190.80 142 266 9.5E-36 T 11-10-2018 AL538_12335 0cf5a42d3afc87f81f392406f4d57a57 267 Gene3D G3DSA:3.30.540.10 1 140 2.7E-48 T 11-10-2018 AL538_17445 fd3ecc2a0be338f7985d002e9715fe64 542 SMART SM00283 280 541 2.1E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17445 fd3ecc2a0be338f7985d002e9715fe64 542 SUPERFAMILY SSF58104 233 542 4.19E-71 T 11-10-2018 AL538_17445 fd3ecc2a0be338f7985d002e9715fe64 542 SMART SM00304 213 265 1.1E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17445 fd3ecc2a0be338f7985d002e9715fe64 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 508 1.8E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17445 fd3ecc2a0be338f7985d002e9715fe64 542 Gene3D G3DSA:1.10.287.950 213 542 9.8E-72 T 11-10-2018 AL538_21135 f4e102500b9bcb83ae747d06642164fd 237 SUPERFAMILY SSF53335 3 143 1.22E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_21135 f4e102500b9bcb83ae747d06642164fd 237 Pfam PF08241 Methyltransferase domain 39 127 8.9E-19 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_21135 f4e102500b9bcb83ae747d06642164fd 237 Gene3D G3DSA:3.40.50.150 5 232 1.4E-30 T 11-10-2018 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 Gene3D G3DSA:2.60.300.12 2 107 4.6E-38 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.4E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.5E-26 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 SUPERFAMILY SSF89360 1 96 1.83E-34 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AL538_12360 9ef414d8e49267b9b6ade86f7cc8fd07 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.7E-56 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AL538_02510 09a07714f1fbf3cc813b77b13a126969 225 Pfam PF01844 HNH endonuclease 154 204 1.3E-12 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL538_02510 09a07714f1fbf3cc813b77b13a126969 225 Gene3D G3DSA:3.30.40.60 127 222 1.7E-7 T 11-10-2018 AL538_02510 09a07714f1fbf3cc813b77b13a126969 225 SMART SM00507 141 200 1.9E-10 T 11-10-2018 IPR003615 HNH nuclease AL538_24415 5f863b65b417508e71a8215a1b43b454 398 Gene3D G3DSA:3.90.1150.10 14 392 2.0E-137 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 SUPERFAMILY SSF53383 1 398 1.52E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_24415 5f863b65b417508e71a8215a1b43b454 398 Pfam PF00155 Aminotransferase class I and II 30 392 1.8E-66 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 Gene3D G3DSA:3.40.640.10 48 315 2.0E-137 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 5.3E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 5.3E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 5.3E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_24415 5f863b65b417508e71a8215a1b43b454 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 5.3E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_10555 ae35432691fb9647c97a04048c44ff92 311 SMART SM00672 93 302 9.9E-5 T 11-10-2018 IPR006598 Lipopolysaccharide-modifying protein AL538_10555 ae35432691fb9647c97a04048c44ff92 311 Pfam PF05686 Glycosyl transferase family 90 140 286 5.4E-15 T 11-10-2018 IPR006598 Lipopolysaccharide-modifying protein AL538_01445 2bb869a5d32cf96022a65f1ff46d9a1c 394 SUPERFAMILY SSF103473 9 385 1.05E-49 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_01445 2bb869a5d32cf96022a65f1ff46d9a1c 394 Gene3D G3DSA:1.20.1250.20 5 189 1.5E-26 T 11-10-2018 AL538_01445 2bb869a5d32cf96022a65f1ff46d9a1c 394 Gene3D G3DSA:1.20.1250.20 201 388 2.2E-12 T 11-10-2018 AL538_01445 2bb869a5d32cf96022a65f1ff46d9a1c 394 Pfam PF07690 Major Facilitator Superfamily 23 303 3.7E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_06230 72008020599a983d6165114d2ed35cef 157 SUPERFAMILY SSF46557 2 75 1.7E-24 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.1E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 Gene3D G3DSA:3.10.50.30 75 157 1.2E-30 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 Gene3D G3DSA:1.10.287.180 1 74 1.5E-24 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 7.3E-24 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.6E-53 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 SUPERFAMILY SSF54534 81 156 1.57E-24 T 11-10-2018 AL538_06230 72008020599a983d6165114d2ed35cef 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.609 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AL538_06230 72008020599a983d6165114d2ed35cef 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AL538_06230 72008020599a983d6165114d2ed35cef 157 PIRSF PIRSF006092 1 157 2.6E-47 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 Gene3D G3DSA:1.20.120.920 96 292 1.7E-86 T 11-10-2018 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 14 298 17.86 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 273 2.2E-112 T 11-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 Gene3D G3DSA:3.100.10.20 1 95 4.4E-39 T 11-10-2018 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 Pfam PF01867 CRISPR associated protein Cas1 127 245 4.2E-11 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AL538_00340 7c1b81b79d0bd524f667ece482c2867c 306 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 133 264 2.6E-31 T 11-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 SUPERFAMILY SSF52425 4 194 2.62E-45 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 1.1E-57 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 PRINTS PR00147 DNA photolyase signature 336 354 2.5E-6 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 PRINTS PR00147 DNA photolyase signature 316 332 2.5E-6 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 Pfam PF00875 DNA photolyase 6 134 8.7E-24 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 SUPERFAMILY SSF48173 191 468 1.28E-80 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 Gene3D G3DSA:3.40.50.620 1 130 2.6E-29 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 Gene3D G3DSA:1.25.40.80 168 278 2.7E-15 T 11-10-2018 AL538_18185 73f62a870824fea7b8cc00e5fb3d3d87 493 Gene3D G3DSA:1.10.579.10 291 479 8.2E-60 T 11-10-2018 AL538_08890 7c5ab904000b4850124031bde7cee840 149 Pfam PF10980 Protein of unknown function (DUF2787) 15 138 1.5E-32 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_08890 7c5ab904000b4850124031bde7cee840 149 Gene3D G3DSA:3.10.450.430 1 141 2.0E-26 T 11-10-2018 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 Gene3D G3DSA:3.40.630.10 28 406 8.2E-126 T 11-10-2018 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 PIRSF PIRSF001235 9 415 1.8E-117 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 SUPERFAMILY SSF55031 218 332 4.93E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 Gene3D G3DSA:3.30.70.360 218 331 8.2E-126 T 11-10-2018 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 SUPERFAMILY SSF53187 11 410 3.43E-72 T 11-10-2018 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 408 2.2E-115 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 AL538_15460 f517cda3fbfdcf9e7c14fce065a7d6fd 415 Pfam PF01546 Peptidase family M20/M25/M40 82 409 5.8E-23 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 SUPERFAMILY SSF63411 530 750 4.03E-18 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 SUPERFAMILY SSF63411 57 270 9.53E-44 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 SUPERFAMILY SSF63411 353 479 1.13E-7 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Gene3D G3DSA:3.30.830.10 51 273 3.6E-62 T 11-10-2018 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Gene3D G3DSA:3.30.830.10 538 748 1.0E-9 T 11-10-2018 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Pfam PF05193 Peptidase M16 inactive domain 702 871 1.4E-11 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Pfam PF05193 Peptidase M16 inactive domain 227 403 8.2E-15 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Gene3D G3DSA:3.30.830.10 291 480 6.9E-12 T 11-10-2018 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 85 108 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Pfam PF00675 Insulinase (Peptidase family M16) 66 186 2.6E-33 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL538_26735 29072eff4bba82855aee84e8b8897faa 948 SUPERFAMILY SSF63411 804 947 2.37E-9 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_26735 29072eff4bba82855aee84e8b8897faa 948 Gene3D G3DSA:3.30.830.10 772 948 1.4E-8 T 11-10-2018 AL538_02090 2a91fa533c37052dddc821894642592b 269 Gene3D G3DSA:1.10.260.40 2 68 6.5E-6 T 11-10-2018 AL538_02090 2a91fa533c37052dddc821894642592b 269 SMART SM00530 12 66 9.8E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_02090 2a91fa533c37052dddc821894642592b 269 SUPERFAMILY SSF47413 5 70 4.07E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_02090 2a91fa533c37052dddc821894642592b 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 1.5E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 SUPERFAMILY SSF53067 8 221 2.46E-59 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 7.1E-151 T 11-10-2018 IPR020823 Cell division protein FtsA AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Gene3D G3DSA:3.30.420.40 13 379 4.4E-111 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Gene3D G3DSA:3.90.640.10 235 300 4.4E-111 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.196 T 11-10-2018 IPR020823 Cell division protein FtsA AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Gene3D G3DSA:3.30.1490.110 87 169 4.4E-111 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Gene3D G3DSA:3.30.420.40 197 359 4.4E-111 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 Pfam PF14450 Cell division protein FtsA 207 381 6.4E-24 T 11-10-2018 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 PIRSF PIRSF003101 1 420 4.3E-146 T 11-10-2018 IPR020823 Cell division protein FtsA AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 SMART SM00842 10 196 6.1E-95 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AL538_11655 03f543252e4bf2b5a33499b436e936f0 420 SUPERFAMILY SSF53067 198 384 2.36E-45 T 11-10-2018 AL538_02925 427d0f9a418d511c897eb8e1c0bb5c40 195 Pfam PF12464 Maltose acetyltransferase 12 57 6.7E-7 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_02925 427d0f9a418d511c897eb8e1c0bb5c40 195 Gene3D G3DSA:2.160.10.10 3 189 1.6E-63 T 11-10-2018 AL538_02925 427d0f9a418d511c897eb8e1c0bb5c40 195 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_02925 427d0f9a418d511c897eb8e1c0bb5c40 195 SUPERFAMILY SSF51161 10 191 1.52E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_02925 427d0f9a418d511c897eb8e1c0bb5c40 195 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 9.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_21040 4bea5acd0675cebbc83afebfe9b4faa0 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 7.6E-18 T 11-10-2018 IPR005648 Flagellar hook capping protein AL538_21040 4bea5acd0675cebbc83afebfe9b4faa0 227 Gene3D G3DSA:2.60.40.4070 111 190 8.4E-18 T 11-10-2018 AL538_21040 4bea5acd0675cebbc83afebfe9b4faa0 227 Pfam PF13861 FlgD Tudor-like domain 94 223 5.6E-11 T 11-10-2018 IPR025963 FlgD Tudor-like domain AL538_21040 4bea5acd0675cebbc83afebfe9b4faa0 227 Pfam PF13860 FlgD Ig-like domain 111 183 4.6E-10 T 11-10-2018 IPR025965 FlgD Ig-like domain AL538_21040 4bea5acd0675cebbc83afebfe9b4faa0 227 Gene3D G3DSA:2.30.30.910 100 222 8.4E-18 T 11-10-2018 AL538_21050 eb8fc3d5e9c8c76a22b7b27a630c1417 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.6E-31 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_21050 eb8fc3d5e9c8c76a22b7b27a630c1417 243 SUPERFAMILY SSF117143 77 175 1.31E-11 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_21050 eb8fc3d5e9c8c76a22b7b27a630c1417 243 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 220 2.4E-54 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AL538_21050 eb8fc3d5e9c8c76a22b7b27a630c1417 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 1.2E-15 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_21050 eb8fc3d5e9c8c76a22b7b27a630c1417 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 SUPERFAMILY SSF46589 14 99 4.24E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 9.2E-25 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.4E-111 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 4.2E-106 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 Gene3D G3DSA:3.30.930.10 7 327 5.1E-126 T 11-10-2018 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.953 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AL538_02060 3be93889eb97407ac81035c0952a1be8 327 SUPERFAMILY SSF55681 92 327 2.74E-82 T 11-10-2018 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 SUPERFAMILY SSF53383 16 399 3.5E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 7.8E-150 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 PIRSF PIRSF000521 172 402 1.8E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 PIRSF PIRSF000521 28 155 5.2E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.466 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 Pfam PF00202 Aminotransferase class-III 22 399 3.2E-128 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 Gene3D G3DSA:3.40.640.10 59 304 4.5E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 Gene3D G3DSA:3.90.1150.10 25 392 4.5E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_08010 0620bdd7c34c831387b3e032f65dc3a6 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 4.2E-207 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 SUPERFAMILY SSF53807 12 291 5.4E-78 T 11-10-2018 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 Gene3D G3DSA:3.40.50.1980 21 179 2.1E-48 T 11-10-2018 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 PRINTS PR00690 Adhesin family signature 63 80 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 PRINTS PR00690 Adhesin family signature 232 250 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 PRINTS PR00690 Adhesin family signature 179 200 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 PRINTS PR00690 Adhesin family signature 50 63 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 4.0E-60 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL538_13790 2c5ebbea75c0c4638e756721c092c195 293 Gene3D G3DSA:3.40.50.1980 180 293 2.3E-40 T 11-10-2018 AL538_26110 4b4324ad0b7ba8734d7288040da0c44f 701 Gene3D G3DSA:2.120.10.30 103 257 5.1E-5 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_26110 4b4324ad0b7ba8734d7288040da0c44f 701 SUPERFAMILY SSF101898 43 233 1.05E-13 T 11-10-2018 AL538_26110 4b4324ad0b7ba8734d7288040da0c44f 701 TIGRFAM TIGR04456 LruC_dom: LruC domain 440 691 1.8E-85 T 11-10-2018 IPR031025 LruC domain AL538_26110 4b4324ad0b7ba8734d7288040da0c44f 701 Pfam PF16130 Domain of unknown function (DUF4842) 473 690 2.6E-60 T 11-10-2018 IPR032295 Domain of unknown function DUF4842 AL538_21035 375bbf9e00ac8b8513daaf7012371438 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 140 1.5E-8 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_21035 375bbf9e00ac8b8513daaf7012371438 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_21035 375bbf9e00ac8b8513daaf7012371438 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 3.5E-40 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.0E-39 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 Gene3D G3DSA:3.30.2310.10 140 227 2.2E-19 T 11-10-2018 AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 11-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 Gene3D G3DSA:2.40.30.70 1 139 9.3E-43 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 8.0E-48 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AL538_05575 391bc35ab26e8fc92086596384dc05dd 231 SUPERFAMILY SSF118196 1 226 1.83E-78 T 11-10-2018 IPR036413 YaeB-like superfamily AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 SUPERFAMILY SSF46561 1 61 2.09E-23 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.306 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 Gene3D G3DSA:1.10.287.310 1 63 1.6E-31 T 11-10-2018 AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10865 580cdffbfc77cf4dc978ab7b0d9205e9 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.8E-25 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.7E-157 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.448 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11625 87a9ce0823185ee44fbdf042656ccc1f 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.8E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AL538_10860 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 90 2.7E-25 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 Gene3D G3DSA:1.20.5.440 97 140 3.7E-15 T 11-10-2018 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 1.0E-26 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 137 20.814 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 SUPERFAMILY SSF51344 8 92 3.27E-21 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 94 138 3.2E-9 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 Gene3D G3DSA:2.60.15.10 8 96 3.7E-26 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 139 2.1E-38 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23175 c83bd014b5373c6814ab6fa3c8138d6f 145 SUPERFAMILY SSF46604 94 141 2.62E-11 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23620 4138fee9c60215ceeeb977b60884c832 469 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 12 441 2.2E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23620 4138fee9c60215ceeeb977b60884c832 469 SUPERFAMILY SSF81442 7 465 9.29E-106 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23620 4138fee9c60215ceeeb977b60884c832 469 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 460 1.7E-178 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL538_23620 4138fee9c60215ceeeb977b60884c832 469 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23620 4138fee9c60215ceeeb977b60884c832 469 Gene3D G3DSA:1.20.210.10 2 469 1.6E-179 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_12950 df009cc81b064904a7782ba84241fd24 521 Gene3D G3DSA:3.30.70.270 348 521 2.0E-41 T 11-10-2018 AL538_12950 df009cc81b064904a7782ba84241fd24 521 SMART SM00267 351 521 5.1E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_12950 df009cc81b064904a7782ba84241fd24 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 519 1.6E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_12950 df009cc81b064904a7782ba84241fd24 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 4.1E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_12950 df009cc81b064904a7782ba84241fd24 521 SUPERFAMILY SSF55073 366 519 2.67E-35 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 9.4E-128 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 163.873 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 Pfam PF14489 QueF-like protein 194 270 1.4E-26 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 SUPERFAMILY SSF55620 184 267 5.63E-10 T 11-10-2018 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.7E-48 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 Gene3D G3DSA:3.30.1130.10 143 281 1.6E-62 T 11-10-2018 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 PIRSF PIRSF004750 6 281 5.0E-130 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AL538_12960 99fcfb0f38e813b7ac2abfdf84e18a14 281 Gene3D G3DSA:3.30.1130.10 21 138 1.7E-45 T 11-10-2018 AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 Pfam PF02195 ParB-like nuclease domain 43 130 7.8E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 Gene3D G3DSA:1.10.10.2830 117 230 2.4E-34 T 11-10-2018 AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 Gene3D G3DSA:3.90.1530.30 53 116 2.3E-26 T 11-10-2018 AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 9.9E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 SMART SM00470 40 130 2.5E-35 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AL538_09630 3a80aeaa39d6755e4fd6596e886d45ed 293 SUPERFAMILY SSF110849 44 174 2.88E-32 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 Gene3D G3DSA:1.10.150.130 102 214 1.9E-30 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 SUPERFAMILY SSF56349 106 386 3.53E-61 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 Gene3D G3DSA:3.30.160.390 7 95 1.3E-27 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 Gene3D G3DSA:1.10.443.10 215 387 1.6E-18 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 Pfam PF00589 Phage integrase family 214 376 3.4E-27 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_12675 3129c50255c533aec56b9ce04fbe4639 412 Pfam PF13356 Arm DNA-binding domain 8 95 2.1E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL538_17600 1a674360011ff475bf0d76c93342f5c8 115 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 110 3.0E-37 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AL538_17600 1a674360011ff475bf0d76c93342f5c8 115 Pfam PF06942 GlpM protein 6 112 7.4E-48 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC AL538_24250 145fa85c50b0f8888932686b2020da40 723 Gene3D G3DSA:2.40.170.20 172 723 2.2E-111 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_24250 145fa85c50b0f8888932686b2020da40 723 SUPERFAMILY SSF56935 19 723 7.33E-108 T 11-10-2018 AL538_24250 145fa85c50b0f8888932686b2020da40 723 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 723 3.4E-138 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AL538_24250 145fa85c50b0f8888932686b2020da40 723 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 723 1.9E-113 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AL538_24250 145fa85c50b0f8888932686b2020da40 723 Pfam PF00593 TonB dependent receptor 258 721 1.7E-54 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_24250 145fa85c50b0f8888932686b2020da40 723 Gene3D G3DSA:2.170.130.10 28 157 4.3E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_24250 145fa85c50b0f8888932686b2020da40 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 152 2.1E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_16130 f75bd6662804a7fd3d1831307e74351f 496 Pfam PF01740 STAS domain 400 486 6.1E-7 T 11-10-2018 IPR002645 STAS domain AL538_16130 f75bd6662804a7fd3d1831307e74351f 496 Gene3D G3DSA:3.30.750.24 386 484 2.8E-24 T 11-10-2018 IPR036513 STAS domain superfamily AL538_16130 f75bd6662804a7fd3d1831307e74351f 496 SUPERFAMILY SSF52091 393 483 1.96E-12 T 11-10-2018 IPR036513 STAS domain superfamily AL538_16130 f75bd6662804a7fd3d1831307e74351f 496 Pfam PF00916 Sulfate permease family 142 354 1.1E-31 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AL538_15465 1c6251e53ab8d3feb100df89f6c2412d 463 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 458 3.1E-80 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL538_01410 9f0fa8d50dbe684bb7583bf0ba9bf50f 248 Pfam PF00929 Exonuclease 59 229 1.9E-17 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_01410 9f0fa8d50dbe684bb7583bf0ba9bf50f 248 SMART SM00479 57 238 2.1E-27 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_01410 9f0fa8d50dbe684bb7583bf0ba9bf50f 248 Gene3D G3DSA:3.30.420.10 53 237 3.4E-36 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_01410 9f0fa8d50dbe684bb7583bf0ba9bf50f 248 SUPERFAMILY SSF53098 50 237 6.25E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 438 1.8E-16 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 SUPERFAMILY SSF53738 204 311 2.59E-22 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 2.0E-41 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 309 3.9E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 SUPERFAMILY SSF55957 432 554 8.5E-16 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 SUPERFAMILY SSF53738 28 232 1.02E-44 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Gene3D G3DSA:3.40.120.10 33 184 6.4E-47 T 11-10-2018 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Gene3D G3DSA:3.40.120.10 203 321 1.6E-21 T 11-10-2018 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 2.6E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 2.6E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 2.6E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Gene3D G3DSA:3.30.310.50 445 554 1.2E-8 T 11-10-2018 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 486 543 1.3E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 Gene3D G3DSA:3.40.120.10 322 441 3.9E-28 T 11-10-2018 AL538_26215 c61eb8066e85d1ec51bb2abe8d0a6946 564 SUPERFAMILY SSF53738 301 443 9.03E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_08050 b358b24f039f3966189d50d694621e73 828 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AL538_08050 b358b24f039f3966189d50d694621e73 828 SUPERFAMILY SSF50249 145 244 2.1E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08050 b358b24f039f3966189d50d694621e73 828 SUPERFAMILY SSF50249 227 650 1.03E-143 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08050 b358b24f039f3966189d50d694621e73 828 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.8E-274 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL538_08050 b358b24f039f3966189d50d694621e73 828 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 1.5E-12 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain AL538_08050 b358b24f039f3966189d50d694621e73 828 Gene3D G3DSA:2.40.50.140 77 155 1.7E-11 T 11-10-2018 AL538_08050 b358b24f039f3966189d50d694621e73 828 SMART SM00357 90 152 1.1E-11 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_08050 b358b24f039f3966189d50d694621e73 828 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.158 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AL538_08050 b358b24f039f3966189d50d694621e73 828 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 8.7E-256 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL538_08050 b358b24f039f3966189d50d694621e73 828 SUPERFAMILY SSF50249 651 738 5.0E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08050 b358b24f039f3966189d50d694621e73 828 Gene3D G3DSA:2.40.50.140 653 764 4.4E-27 T 11-10-2018 AL538_08050 b358b24f039f3966189d50d694621e73 828 SMART SM00316 650 733 3.8E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_08050 b358b24f039f3966189d50d694621e73 828 Pfam PF00575 S1 RNA binding domain 650 731 6.8E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_08050 b358b24f039f3966189d50d694621e73 828 Pfam PF08206 Ribonuclease B OB domain 91 151 5.2E-21 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL538_08050 b358b24f039f3966189d50d694621e73 828 SMART SM00955 267 595 5.1E-183 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL538_08050 b358b24f039f3966189d50d694621e73 828 SUPERFAMILY SSF50249 71 154 2.62E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08050 b358b24f039f3966189d50d694621e73 828 Pfam PF00773 RNB domain 267 594 2.1E-108 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 SUPERFAMILY SSF55604 6 82 1.83E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 1.9E-23 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 464 1.2E-196 T 11-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 Gene3D G3DSA:3.30.1360.60 1 78 1.2E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 1.1E-50 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 1.0E-94 T 11-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 AL538_15325 f2f246bc3df4a6067f153b223421ea9f 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.0E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 Gene3D G3DSA:2.115.10.20 38 350 8.0E-115 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 SUPERFAMILY SSF75005 33 341 5.65E-99 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 361 455 7.3E-12 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 41 54 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 SMART SM00640 41 444 7.7E-141 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 SUPERFAMILY SSF49899 343 459 1.27E-18 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 Gene3D G3DSA:2.60.120.560 351 456 8.0E-115 T 11-10-2018 AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 25 455 2.8E-186 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 AL538_15335 a5d81b67c344c005bdfb0483ee8b60fd 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 41 341 9.2E-96 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.2E-150 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Pfam PF01493 GXGXG motif 1267 1452 1.5E-83 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 SUPERFAMILY SSF51395 452 1221 2.04E-267 T 11-10-2018 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Pfam PF04898 Glutamate synthase central domain 472 756 5.3E-117 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 SUPERFAMILY SSF69336 1235 1498 3.14E-95 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 SUPERFAMILY SSF56235 21 447 7.72E-153 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Gene3D G3DSA:2.160.20.60 1239 1510 3.1E-109 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11760 75b5b5d86b19c31149a301ef863f7f11 1516 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-185 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 5.4E-17 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 Gene3D G3DSA:3.40.1030.10 71 325 2.6E-125 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 SUPERFAMILY SSF47648 5 71 5.23E-19 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 1.7E-129 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 335 40.065 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 SUPERFAMILY SSF52418 74 333 3.4E-95 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 Gene3D G3DSA:1.20.970.10 14 187 2.6E-125 T 11-10-2018 AL538_03380 afd00db1f80445ef1ab5131695c6998c 336 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 1.3E-106 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_09550 ecdbaf52add374acab94ff748899c183 613 Pfam PF00920 Dehydratase family 34 604 2.3E-222 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09550 ecdbaf52add374acab94ff748899c183 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09550 ecdbaf52add374acab94ff748899c183 613 Gene3D G3DSA:3.50.30.80 421 573 8.4E-56 T 11-10-2018 AL538_09550 ecdbaf52add374acab94ff748899c183 613 SUPERFAMILY SSF52016 421 608 1.57E-61 T 11-10-2018 AL538_09550 ecdbaf52add374acab94ff748899c183 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 4.4E-269 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09550 ecdbaf52add374acab94ff748899c183 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09550 ecdbaf52add374acab94ff748899c183 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.385 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_09550 ecdbaf52add374acab94ff748899c183 613 SUPERFAMILY SSF143975 3 420 1.44E-137 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AL538_12800 7c263b4e77efde4e475fa7a2ee34f1f0 356 Gene3D G3DSA:3.40.630.10 15 320 1.0E-92 T 11-10-2018 AL538_12800 7c263b4e77efde4e475fa7a2ee34f1f0 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 3.7E-72 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_12800 7c263b4e77efde4e475fa7a2ee34f1f0 356 SUPERFAMILY SSF53187 22 319 1.52E-77 T 11-10-2018 AL538_12800 7c263b4e77efde4e475fa7a2ee34f1f0 356 PIRSF PIRSF039012 3 325 9.6E-95 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 469 1.8E-77 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.3E-39 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.5E-35 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_03845 8a8a0807b42c02284d52bc0b2823dea8 486 SUPERFAMILY SSF161070 3 475 7.19E-149 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 6.8E-63 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 PIRSF PIRSF001394 1 505 3.8E-216 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 Pfam PF05683 Fumarase C-terminus 289 490 1.1E-83 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 SUPERFAMILY SSF117457 317 489 8.11E-64 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 3.5E-51 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 5.3E-98 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AL538_02970 8b94a967b0e2a520ea643d024512b079 505 Gene3D G3DSA:3.20.130.10 305 490 2.6E-62 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 SUPERFAMILY SSF53955 153 200 7.87E-5 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 1.5E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 Pfam PF10135 Rod binding protein 53 102 2.4E-15 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 Gene3D G3DSA:2.10.70.40 197 248 2.7E-46 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 SMART SM00047 146 307 1.3E-50 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 4.7E-31 T 11-10-2018 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 2.9E-126 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AL538_13475 16a5154361822dcacab8a3c9bebb2471 308 Gene3D G3DSA:1.10.530.10 163 301 2.7E-46 T 11-10-2018 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 Gene3D G3DSA:3.30.920.10 1 104 8.4E-38 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 SUPERFAMILY SSF55387 1 103 2.44E-38 T 11-10-2018 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 SMART SM01219 1 104 9.3E-54 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 Pfam PF01491 Frataxin-like domain 1 100 4.8E-29 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.371 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09135 176628418b4744d6198f76d3b8c32abb 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 3.8E-42 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 SMART SM00382 210 390 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09530 cab31ab0a85568ba422536898e6d1687 507 Gene3D G3DSA:3.40.50.300 191 499 8.0E-56 T 11-10-2018 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 SUPERFAMILY SSF54211 2 169 2.88E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_09530 cab31ab0a85568ba422536898e6d1687 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 5.0E-90 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AL538_09530 cab31ab0a85568ba422536898e6d1687 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 7.5E-30 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AL538_09530 cab31ab0a85568ba422536898e6d1687 507 SUPERFAMILY SSF52540 187 501 2.93E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09530 cab31ab0a85568ba422536898e6d1687 507 Gene3D G3DSA:3.30.230.10 1 167 1.5E-7 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_09530 cab31ab0a85568ba422536898e6d1687 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 9.1E-212 T 11-10-2018 IPR004482 Mg chelatase-related protein AL538_09530 cab31ab0a85568ba422536898e6d1687 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 5.0E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 5.0E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 5.0E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 5.0E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AL538_09530 cab31ab0a85568ba422536898e6d1687 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 4.9E-49 T 11-10-2018 AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 4.1E-35 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 SUPERFAMILY SSF51419 1 228 1.44E-82 T 11-10-2018 IPR029066 PLP-binding barrel AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 Gene3D G3DSA:3.20.20.10 1 236 4.3E-89 T 11-10-2018 IPR029066 PLP-binding barrel AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.0E-89 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 PIRSF PIRSF004848 1 236 8.4E-79 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL538_07000 f166b3a22b260f6137f32548f9b6c63f 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.204 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 2.0E-124 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 11-10-2018 IPR028976 CheC-like superfamily AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 PIRSF PIRSF002888 1 328 4.9E-92 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 SUPERFAMILY SSF101801 247 322 4.45E-14 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 SUPERFAMILY SSF103039 4 230 5.49E-21 T 11-10-2018 IPR028976 CheC-like superfamily AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AL538_05075 a77c051ddce31a0ca47c355ec5e46db8 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 2.6E-17 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_26710 9c7a86798504330ad2f982ec2278072a 142 Pfam PF05932 Tir chaperone protein (CesT) family 8 112 1.7E-12 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_26710 9c7a86798504330ad2f982ec2278072a 142 Gene3D G3DSA:3.30.1460.10 1 135 2.8E-40 T 11-10-2018 AL538_26710 9c7a86798504330ad2f982ec2278072a 142 SUPERFAMILY SSF69635 4 127 8.63E-38 T 11-10-2018 AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 PRINTS PR00394 RHS protein signature 1026 1046 5.6E-10 T 11-10-2018 IPR001826 RHS protein AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 PRINTS PR00394 RHS protein signature 1079 1099 5.6E-10 T 11-10-2018 IPR001826 RHS protein AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 PRINTS PR00394 RHS protein signature 1102 1121 5.6E-10 T 11-10-2018 IPR001826 RHS protein AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 Gene3D G3DSA:3.90.930.1 412 559 5.4E-6 T 11-10-2018 AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1059 1134 5.3E-26 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 Gene3D G3DSA:2.180.10.10 715 1134 4.9E-37 T 11-10-2018 AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 Pfam PF05593 RHS Repeat 957 993 3.8E-5 T 11-10-2018 IPR031325 RHS repeat AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 Pfam PF03527 RHS protein 1032 1068 7.5E-14 T 11-10-2018 IPR001826 RHS protein AL538_24840 0b7df20ec494d291cb6d9eb17f0d200f 1412 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 957 993 2.2E-4 T 11-10-2018 IPR006530 YD repeat AL538_06505 285e187d87c36ed210d56f67b08f8041 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_06505 285e187d87c36ed210d56f67b08f8041 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 5.8E-12 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL538_06505 285e187d87c36ed210d56f67b08f8041 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 5.8E-12 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL538_06505 285e187d87c36ed210d56f67b08f8041 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.6E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_06505 285e187d87c36ed210d56f67b08f8041 146 Pfam PF00114 Pilin (bacterial filament) 41 143 1.2E-10 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AL538_06505 285e187d87c36ed210d56f67b08f8041 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 5.0E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_06505 285e187d87c36ed210d56f67b08f8041 146 Gene3D G3DSA:3.30.700.10 12 145 1.2E-29 T 11-10-2018 AL538_06505 285e187d87c36ed210d56f67b08f8041 146 SUPERFAMILY SSF54523 12 143 1.88E-25 T 11-10-2018 AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 PIRSF PIRSF006223 2 109 4.2E-40 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 SUPERFAMILY SSF69721 2 109 6.41E-41 T 11-10-2018 IPR025526 DsrC-like domain superfamily AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 Gene3D G3DSA:3.30.1420.10 2 38 1.7E-12 T 11-10-2018 AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 Gene3D G3DSA:1.10.10.370 39 109 1.4E-30 T 11-10-2018 AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 2.1E-49 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL538_00975 29ad3cd079d49e0c51ee78399cf2ea4a 109 Pfam PF04358 DsrC like protein 4 109 1.2E-43 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE AL538_06565 5c31382371777c0ed1eaa1bb57e93d39 264 Pfam PF01578 Cytochrome C assembly protein 39 262 4.0E-46 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 Pfam PF05175 Methyltransferase small domain 200 373 1.8E-54 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 Gene3D G3DSA:3.40.50.150 188 380 3.7E-44 T 11-10-2018 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 Pfam PF08468 Methyltransferase small domain N-terminal 47 165 6.2E-7 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 PIRSF PIRSF037565 1 377 9.8E-171 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 Gene3D G3DSA:3.40.50.150 8 182 1.5E-50 T 11-10-2018 AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 SUPERFAMILY SSF53335 196 370 1.72E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_05680 7d97a3c19bfd77dc4270f93557bb067a 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.789 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 AL538_02020 f10460774e6ac0442aa57087ad601c20 292 Pfam PF03547 Membrane transport protein 145 284 7.6E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL538_20480 eca0c09d63aeb8e1c431ee7ad0b09697 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 63 177 8.1E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 368 389 0.0039 T 11-10-2018 IPR020008 GlyGly-CTERM domain AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 SMART SM00020 25 315 9.5E-22 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 Gene3D G3DSA:2.40.10.10 45 159 1.0E-16 T 11-10-2018 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 Gene3D G3DSA:2.40.10.10 160 318 1.4E-23 T 11-10-2018 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 Pfam PF00089 Trypsin 45 315 9.5E-27 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 3.9E-15 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 3.9E-15 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 3.9E-15 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AL538_12295 3e946ad85d18eaa9b332fc4e3384d343 390 SUPERFAMILY SSF50494 48 319 4.47E-39 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 4.4E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 4.4E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 334 4.4E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 4.4E-13 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 Pfam PF00209 Sodium:neurotransmitter symporter family 149 446 1.9E-32 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 Pfam PF00209 Sodium:neurotransmitter symporter family 9 119 2.0E-22 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_16040 9ed5900c642cb37f3146fb67181071f3 475 SUPERFAMILY SSF161070 9 456 3.01E-129 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL538_20930 932724a78c54a4edbd5b57ccc0fa3ede 303 Pfam PF04393 Protein of unknown function (DUF535) 27 294 8.5E-79 T 11-10-2018 IPR007488 Protein of unknown function DUF535 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 PIRSF PIRSF001563 6 420 1.1E-105 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 Pfam PF08245 Mur ligase middle domain 54 193 9.7E-7 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 5.8E-104 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 339 7.3E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 SUPERFAMILY SSF53244 288 416 1.04E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 SUPERFAMILY SSF53623 14 285 5.89E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 Gene3D G3DSA:3.90.190.20 288 419 1.3E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AL538_04820 9ffe5a71369b024a8c0e270d0fe7dea8 420 Gene3D G3DSA:3.40.1190.10 1 287 4.7E-91 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AL538_24850 688fbc0fb65b0848415f5a8680961042 96 Gene3D G3DSA:2.60.200.60 1 53 3.7E-11 T 11-10-2018 AL538_24850 688fbc0fb65b0848415f5a8680961042 96 Gene3D G3DSA:2.60.200.60 54 95 3.2E-12 T 11-10-2018 AL538_24850 688fbc0fb65b0848415f5a8680961042 96 Pfam PF05488 PAAR motif 18 85 5.0E-24 T 11-10-2018 IPR008727 PAAR motif AL538_08225 05b68189b704e80d034d988047e28e46 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 2.1E-59 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.146 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_08225 05b68189b704e80d034d988047e28e46 154 Gene3D G3DSA:3.10.420.10 4 154 2.5E-58 T 11-10-2018 IPR035958 SecB-like superfamily AL538_08225 05b68189b704e80d034d988047e28e46 154 SUPERFAMILY SSF54611 4 143 3.71E-52 T 11-10-2018 IPR035958 SecB-like superfamily AL538_08225 05b68189b704e80d034d988047e28e46 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.8E-55 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AL538_03170 165a7e7e7d577b6ff2adf17ab1c20e01 198 Gene3D G3DSA:3.40.50.10990 6 174 4.4E-64 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_03170 165a7e7e7d577b6ff2adf17ab1c20e01 198 SUPERFAMILY SSF142695 19 172 6.8E-55 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_03170 165a7e7e7d577b6ff2adf17ab1c20e01 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.169 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_03170 165a7e7e7d577b6ff2adf17ab1c20e01 198 Pfam PF00925 GTP cyclohydrolase II 19 171 1.4E-59 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_27185 f81c27ce118dbda8783a5b8eb723995d 188 Pfam PF09374 Predicted Peptidoglycan domain 112 178 7.8E-17 T 11-10-2018 IPR018537 Peptidoglycan binding domain AL538_27185 f81c27ce118dbda8783a5b8eb723995d 188 Pfam PF05838 Glycosyl hydrolase 108 21 108 5.4E-23 T 11-10-2018 IPR008565 Protein of unknown function DUF847 AL538_27185 f81c27ce118dbda8783a5b8eb723995d 188 Gene3D G3DSA:1.20.141.10 16 186 5.4E-38 T 11-10-2018 AL538_27185 f81c27ce118dbda8783a5b8eb723995d 188 SUPERFAMILY SSF53955 16 180 1.63E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_17800 f3d6632862ce1024cf0534d1ee295538 116 Pfam PF00581 Rhodanese-like domain 31 111 1.2E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_17800 f3d6632862ce1024cf0534d1ee295538 116 SMART SM00450 24 116 1.5E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_17800 f3d6632862ce1024cf0534d1ee295538 116 Gene3D G3DSA:3.40.250.10 25 116 1.5E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_17800 f3d6632862ce1024cf0534d1ee295538 116 SUPERFAMILY SSF52821 6 108 1.14E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 Gene3D G3DSA:1.20.1560.10 10 319 3.7E-40 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 SUPERFAMILY SSF90123 13 316 1.7E-45 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 Pfam PF00664 ABC transporter transmembrane region 27 283 1.4E-20 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 Gene3D G3DSA:3.40.50.300 325 556 3.0E-52 T 11-10-2018 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 SMART SM00382 358 549 1.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 Pfam PF00005 ABC transporter 351 498 8.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_18585 d19c797fe0c070bc8dfdf30c5b780614 556 SUPERFAMILY SSF52540 332 547 1.13E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 Pfam PF12838 4Fe-4S dicluster domain 117 155 1.0E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 Pfam PF12838 4Fe-4S dicluster domain 47 90 6.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 Gene3D G3DSA:3.30.70.20 37 101 1.1E-12 T 11-10-2018 AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 Gene3D G3DSA:3.30.70.20 104 160 4.9E-10 T 11-10-2018 AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 SUPERFAMILY SSF54862 41 162 1.57E-20 T 11-10-2018 AL538_16710 ab263e960cfa126d7a35ddc569447b03 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_13130 6321ee74260676f13b05dc054c301a1b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 1.5E-17 T 11-10-2018 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.5E-17 T 11-10-2018 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 1.5E-17 T 11-10-2018 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.5E-17 T 11-10-2018 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 Gene3D G3DSA:3.50.50.60 5 338 6.8E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_13130 6321ee74260676f13b05dc054c301a1b 391 Pfam PF01494 FAD binding domain 4 340 7.6E-27 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 SUPERFAMILY SSF51905 3 383 5.61E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_13130 6321ee74260676f13b05dc054c301a1b 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 2.1E-109 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AL538_13130 6321ee74260676f13b05dc054c301a1b 391 Gene3D G3DSA:3.30.9.50 80 274 6.8E-97 T 11-10-2018 AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 SUPERFAMILY SSF53067 85 391 8.1E-56 T 11-10-2018 AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 Pfam PF00480 ROK family 86 390 5.9E-77 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 Gene3D G3DSA:3.30.420.40 207 376 5.8E-94 T 11-10-2018 AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13660 f450696ca39086f970d1dae27e8d6c50 404 Gene3D G3DSA:3.30.420.40 90 384 5.8E-94 T 11-10-2018 AL538_07410 60f7990bce41385c8154f32961630bdb 320 Gene3D G3DSA:3.40.50.720 25 317 1.5E-110 T 11-10-2018 AL538_07410 60f7990bce41385c8154f32961630bdb 320 SUPERFAMILY SSF51735 103 290 5.21E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07410 60f7990bce41385c8154f32961630bdb 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_07410 60f7990bce41385c8154f32961630bdb 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_07410 60f7990bce41385c8154f32961630bdb 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 317 1.2E-24 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL538_07410 60f7990bce41385c8154f32961630bdb 320 SUPERFAMILY SSF52283 4 139 4.35E-33 T 11-10-2018 AL538_07410 60f7990bce41385c8154f32961630bdb 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 8.5E-55 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_07410 60f7990bce41385c8154f32961630bdb 320 Gene3D G3DSA:3.40.50.720 99 288 1.5E-110 T 11-10-2018 AL538_28495 02ca80e93ad1125144cd9289260bee69 116 Pfam PF01809 Haemolytic domain 3 67 9.7E-9 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28495 02ca80e93ad1125144cd9289260bee69 116 SMART SM01234 1 55 0.002 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_17570 e8ced8ae0505714c9f42672e6db7bf76 128 SUPERFAMILY SSF52402 3 124 3.1E-23 T 11-10-2018 AL538_17570 e8ced8ae0505714c9f42672e6db7bf76 128 Pfam PF00582 Universal stress protein family 3 108 4.6E-14 T 11-10-2018 IPR006016 UspA AL538_17570 e8ced8ae0505714c9f42672e6db7bf76 128 PIRSF PIRSF006276 1 128 4.9E-35 T 11-10-2018 IPR006015 Universal stress protein A AL538_17570 e8ced8ae0505714c9f42672e6db7bf76 128 Gene3D G3DSA:3.40.50.620 2 128 5.9E-29 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_23815 c5e9572ec8f5bef48c9946c93b53fa66 154 SUPERFAMILY SSF49478 15 60 9.42E-5 T 11-10-2018 AL538_26910 e5fce8ca95f44036a1ae1ad2fb3ecf1a 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 303 4.8E-64 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_26910 e5fce8ca95f44036a1ae1ad2fb3ecf1a 304 Gene3D G3DSA:1.20.1510.10 18 231 3.9E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_26910 e5fce8ca95f44036a1ae1ad2fb3ecf1a 304 Pfam PF01545 Cation efflux family 23 231 1.5E-37 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_26910 e5fce8ca95f44036a1ae1ad2fb3ecf1a 304 SUPERFAMILY SSF161111 14 232 1.26E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 2.3E-238 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 Gene3D G3DSA:1.10.580.10 57 411 6.8E-151 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PIRSF PIRSF001369 38 429 7.4E-175 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 296 316 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 379 393 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 219 234 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 241 269 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 359 375 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 PRINTS PR00143 Citrate synthase signature 165 178 2.7E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 SUPERFAMILY SSF48256 4 428 8.24E-170 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 Gene3D G3DSA:2.20.28.60 1 50 3.8E-26 T 11-10-2018 AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 Gene3D G3DSA:1.10.230.10 268 376 6.8E-151 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AL538_13735 a558c1c59e36c031e1dbbba7b6bc83f6 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 3.6E-135 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 Gene3D G3DSA:1.10.260.40 1 58 8.9E-23 T 11-10-2018 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 SMART SM00354 1 71 3.6E-38 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.2E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 Gene3D G3DSA:3.40.50.2300 164 286 9.5E-63 T 11-10-2018 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 SUPERFAMILY SSF53822 58 316 8.25E-59 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 Gene3D G3DSA:3.40.50.2300 65 309 9.5E-63 T 11-10-2018 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 Pfam PF13377 Periplasmic binding protein-like domain 170 328 2.2E-26 T 11-10-2018 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 SUPERFAMILY SSF47413 1 60 6.22E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_15320 2b8197f8b1a620aadd6d0f436a1ffd24 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_01365 b995538a782767f6b6fa549793180a2d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01365 b995538a782767f6b6fa549793180a2d 294 SUPERFAMILY SSF53850 90 290 2.95E-35 T 11-10-2018 AL538_01365 b995538a782767f6b6fa549793180a2d 294 Gene3D G3DSA:3.40.190.290 91 289 9.7E-49 T 11-10-2018 AL538_01365 b995538a782767f6b6fa549793180a2d 294 SUPERFAMILY SSF46785 3 86 1.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01365 b995538a782767f6b6fa549793180a2d 294 Gene3D G3DSA:1.10.10.10 2 89 3.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01365 b995538a782767f6b6fa549793180a2d 294 Pfam PF03466 LysR substrate binding domain 90 289 1.2E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_20955 69ae5eb31688195bc191b96053065971 291 Gene3D G3DSA:3.40.190.10 102 285 5.3E-42 T 11-10-2018 AL538_20955 69ae5eb31688195bc191b96053065971 291 Gene3D G3DSA:1.10.10.10 6 96 2.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20955 69ae5eb31688195bc191b96053065971 291 Gene3D G3DSA:3.40.190.10 162 260 5.3E-42 T 11-10-2018 AL538_20955 69ae5eb31688195bc191b96053065971 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20955 69ae5eb31688195bc191b96053065971 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20955 69ae5eb31688195bc191b96053065971 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20955 69ae5eb31688195bc191b96053065971 291 SUPERFAMILY SSF46785 3 84 2.09E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20955 69ae5eb31688195bc191b96053065971 291 Pfam PF03466 LysR substrate binding domain 89 289 3.2E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_20955 69ae5eb31688195bc191b96053065971 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20955 69ae5eb31688195bc191b96053065971 291 SUPERFAMILY SSF53850 92 290 9.41E-29 T 11-10-2018 AL538_07325 443f2a56e1aaca7573117b1c3f96f858 212 PIRSF PIRSF004649 1 212 3.3E-57 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL538_07325 443f2a56e1aaca7573117b1c3f96f858 212 Gene3D G3DSA:3.10.450.710 25 204 4.1E-39 T 11-10-2018 AL538_07325 443f2a56e1aaca7573117b1c3f96f858 212 Pfam PF05494 MlaC protein 33 200 2.1E-46 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL538_09735 9892b3a47af197477fa575205f2e2d52 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 4.2E-20 T 11-10-2018 IPR001727 Gdt1 family AL538_09735 9892b3a47af197477fa575205f2e2d52 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.3E-20 T 11-10-2018 IPR001727 Gdt1 family AL538_02190 981d22e442341800244f62d97e1c4a1e 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 11-10-2018 IPR024498 Domain of unknown function DUF2786 AL538_02190 981d22e442341800244f62d97e1c4a1e 231 PIRSF PIRSF028111 1 228 5.8E-85 T 11-10-2018 IPR016868 Bacteriophage B3, Orf5 AL538_16945 9e4fce31b0ff61a1751c54a81b69d7b8 242 SUPERFAMILY SSF53850 36 239 5.27E-18 T 11-10-2018 AL538_16945 9e4fce31b0ff61a1751c54a81b69d7b8 242 Gene3D G3DSA:3.40.190.10 43 239 2.4E-7 T 11-10-2018 AL538_16945 9e4fce31b0ff61a1751c54a81b69d7b8 242 Gene3D G3DSA:3.40.190.10 119 211 2.4E-7 T 11-10-2018 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 SUPERFAMILY SSF51735 1 173 6.68E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 2.0E-15 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 Gene3D G3DSA:3.40.50.720 6 329 3.6E-121 T 11-10-2018 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 Gene3D G3DSA:3.30.360.10 153 312 3.6E-121 T 11-10-2018 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 SUPERFAMILY SSF55347 154 308 1.83E-50 T 11-10-2018 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.911 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.3E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 SMART SM00859 3 146 1.2E-43 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_07830 b3d91e646f9a6e23dbc0f1cb50133090 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.0E-119 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_04695 817144f7a3d73e532b4bde16eacdb23c 632 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AL538_04695 817144f7a3d73e532b4bde16eacdb23c 632 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 501 3.6E-147 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_04695 817144f7a3d73e532b4bde16eacdb23c 632 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 4.8E-159 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_10570 a0773bc368c1da3d6a9e1fddae4d12aa 361 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 316 1.5E-52 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL538_10570 a0773bc368c1da3d6a9e1fddae4d12aa 361 Gene3D G3DSA:3.40.50.2000 4 154 3.4E-24 T 11-10-2018 AL538_10570 a0773bc368c1da3d6a9e1fddae4d12aa 361 Gene3D G3DSA:3.40.50.2000 167 356 8.9E-36 T 11-10-2018 AL538_10570 a0773bc368c1da3d6a9e1fddae4d12aa 361 SUPERFAMILY SSF53756 9 353 1.22E-77 T 11-10-2018 AL538_04655 14f4b61ed5ab2ff87517925d011bf8cc 147 Pfam PF01641 SelR domain 25 143 6.0E-54 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_04655 14f4b61ed5ab2ff87517925d011bf8cc 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 21 144 4.8E-58 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_04655 14f4b61ed5ab2ff87517925d011bf8cc 147 SUPERFAMILY SSF51316 19 146 6.8E-59 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_04655 14f4b61ed5ab2ff87517925d011bf8cc 147 Gene3D G3DSA:2.170.150.20 3 147 3.1E-61 T 11-10-2018 AL538_04655 14f4b61ed5ab2ff87517925d011bf8cc 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 22 145 37.638 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_25565 c4269d2c5c1cb69f120fc426b63a22d4 204 SUPERFAMILY SSF53041 1 156 1.7E-29 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AL538_25565 c4269d2c5c1cb69f120fc426b63a22d4 204 SMART SM00857 2 156 7.2E-40 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_25565 c4269d2c5c1cb69f120fc426b63a22d4 204 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL538_25565 c4269d2c5c1cb69f120fc426b63a22d4 204 Gene3D G3DSA:3.40.50.1390 2 163 2.3E-32 T 11-10-2018 AL538_25565 c4269d2c5c1cb69f120fc426b63a22d4 204 Pfam PF00239 Resolvase, N terminal domain 4 156 2.0E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 SUPERFAMILY SSF51215 31 156 2.22E-17 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 Pfam PF12833 Helix-turn-helix domain 196 273 1.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 Gene3D G3DSA:1.10.10.60 233 275 2.0E-14 T 11-10-2018 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 Pfam PF02311 AraC-like ligand binding domain 18 150 5.4E-27 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 SMART SM00342 190 272 2.0E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 Gene3D G3DSA:1.10.10.60 170 232 2.5E-15 T 11-10-2018 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 SUPERFAMILY SSF46689 174 224 1.34E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_26230 98b63bf1a4f86503d749821ee3ad6072 275 SUPERFAMILY SSF46689 227 274 2.2E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 SMART SM00079 24 244 0.0063 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 SMART SM00062 24 245 2.2E-75 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 Gene3D G3DSA:3.40.190.10 91 204 1.1E-28 T 11-10-2018 AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 SUPERFAMILY SSF53850 1 246 9.72E-58 T 11-10-2018 AL538_09685 19ae0b573c98a3360700c1aaf3624c9c 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 4.5E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_21310 623b1abde2acbd685024f2a24c4a83ac 128 SUPERFAMILY SSF101116 9 126 6.15E-36 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AL538_21310 623b1abde2acbd685024f2a24c4a83ac 128 Pfam PF02561 Flagellar protein FliS 7 122 8.0E-33 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_21310 623b1abde2acbd685024f2a24c4a83ac 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 4.7E-25 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_21310 623b1abde2acbd685024f2a24c4a83ac 128 Gene3D G3DSA:1.20.120.340 1 127 2.4E-36 T 11-10-2018 AL538_21310 623b1abde2acbd685024f2a24c4a83ac 128 PIRSF PIRSF039090 1 128 1.8E-40 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_26160 8f2f8b49b4a36f6fff039f2bb9a459a1 350 SUPERFAMILY SSF51569 6 347 7.12E-137 T 11-10-2018 AL538_26160 8f2f8b49b4a36f6fff039f2bb9a459a1 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.8E-169 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_26160 8f2f8b49b4a36f6fff039f2bb9a459a1 350 Pfam PF00793 DAHP synthetase I family 38 337 1.4E-105 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_26160 8f2f8b49b4a36f6fff039f2bb9a459a1 350 Gene3D G3DSA:3.20.20.70 1 349 3.4E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_26160 8f2f8b49b4a36f6fff039f2bb9a459a1 350 PIRSF PIRSF001361 1 350 5.5E-161 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 SMART SM00850 145 239 3.9E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 Gene3D G3DSA:3.40.50.2300 1 130 3.9E-29 T 11-10-2018 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 SMART SM00448 2 112 2.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 SUPERFAMILY SSF52172 1 140 7.68E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 Pfam PF00072 Response regulator receiver domain 5 112 5.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.8E-21 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AL538_12015 b7881f38a9f3bb81f78024c8085e0052 242 Gene3D G3DSA:2.40.50.1020 159 241 2.0E-9 T 11-10-2018 AL538_20630 46df2fb4f544d97d5ce1721a31a0054c 678 SUPERFAMILY SSF101898 351 635 4.18E-7 T 11-10-2018 AL538_20630 46df2fb4f544d97d5ce1721a31a0054c 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 1.3E-150 T 11-10-2018 IPR008557 Protein of unknown function DUF839 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 SUPERFAMILY SSF52096 317 529 7.23E-41 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 Gene3D G3DSA:3.90.226.10 315 539 3.1E-162 T 11-10-2018 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 Gene3D G3DSA:3.40.1750.10 186 497 3.1E-162 T 11-10-2018 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 Pfam PF01343 Peptidase family S49 391 541 6.8E-46 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 Pfam PF01343 Peptidase family S49 138 294 1.6E-31 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.8E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.2E-195 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 Gene3D G3DSA:3.90.226.10 94 314 3.1E-162 T 11-10-2018 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 PIRSF PIRSF001217 8 616 2.7E-229 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AL538_04635 5a1c791e4ba61ffc4ba111a2662e254e 616 SUPERFAMILY SSF52096 43 284 4.39E-30 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_12025 cc76667a7a936560cce5bbad966c149a 494 Pfam PF02554 Carbon starvation protein CstA 4 144 2.0E-33 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AL538_12025 cc76667a7a936560cce5bbad966c149a 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 3.5E-22 T 11-10-2018 IPR025299 CstA, C-terminal domain AL538_06435 e1e1dc89b92bab385c51c1f5ea9c8320 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 3.7E-129 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_06435 e1e1dc89b92bab385c51c1f5ea9c8320 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 299 8.0E-70 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_06435 e1e1dc89b92bab385c51c1f5ea9c8320 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 44.517 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_06435 e1e1dc89b92bab385c51c1f5ea9c8320 309 PIRSF PIRSF026649 4 306 8.8E-77 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_04580 c644846bc57c545b221e972fa7a85bc9 449 Gene3D G3DSA:1.20.120.160 328 441 5.8E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_04580 c644846bc57c545b221e972fa7a85bc9 449 Pfam PF01627 Hpt domain 351 428 7.4E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_04580 c644846bc57c545b221e972fa7a85bc9 449 SUPERFAMILY SSF47226 327 442 1.05E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_00180 f666728438d4604b4d24ea5743648f48 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 173 200 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL538_00180 f666728438d4604b4d24ea5743648f48 333 Gene3D G3DSA:3.40.50.720 57 323 1.1E-83 T 11-10-2018 AL538_00180 f666728438d4604b4d24ea5743648f48 333 Gene3D G3DSA:3.40.50.720 120 313 1.1E-83 T 11-10-2018 AL538_00180 f666728438d4604b4d24ea5743648f48 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 59 132 8.9E-13 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL538_00180 f666728438d4604b4d24ea5743648f48 333 SUPERFAMILY SSF52283 55 159 4.54E-20 T 11-10-2018 AL538_00180 f666728438d4604b4d24ea5743648f48 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 133 311 3.5E-58 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_00180 f666728438d4604b4d24ea5743648f48 333 SUPERFAMILY SSF51735 127 312 6.5E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04300 043883fd9da422cc50502a2ef5110e7f 570 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 190 331 2.0E-8 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_04300 043883fd9da422cc50502a2ef5110e7f 570 Pfam PF12793 Sugar transport-related sRNA regulator N-term 18 107 2.6E-18 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL538_04300 043883fd9da422cc50502a2ef5110e7f 570 SUPERFAMILY SSF53850 144 568 8.38E-28 T 11-10-2018 AL538_04300 043883fd9da422cc50502a2ef5110e7f 570 Gene3D G3DSA:3.40.190.10 126 369 2.3E-17 T 11-10-2018 AL538_07945 6e32289e7b9e7b67a2759175a0ed7abd 191 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.0E-12 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_07945 6e32289e7b9e7b67a2759175a0ed7abd 191 Gene3D G3DSA:3.10.50.40 3 154 2.2E-58 T 11-10-2018 AL538_07945 6e32289e7b9e7b67a2759175a0ed7abd 191 Gene3D G3DSA:2.40.10.330 71 121 2.2E-58 T 11-10-2018 AL538_07945 6e32289e7b9e7b67a2759175a0ed7abd 191 SUPERFAMILY SSF54534 2 139 1.0E-34 T 11-10-2018 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 SUPERFAMILY SSF63411 470 694 5.33E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 1.1E-24 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Pfam PF05193 Peptidase M16 inactive domain 648 823 3.5E-9 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Gene3D G3DSA:3.30.830.10 618 877 2.2E-108 T 11-10-2018 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 SUPERFAMILY SSF63411 4 227 1.75E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Gene3D G3DSA:3.30.830.10 470 852 2.2E-108 T 11-10-2018 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 SUPERFAMILY SSF63411 703 902 8.49E-45 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Gene3D G3DSA:3.30.830.10 1 228 1.1E-86 T 11-10-2018 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 SUPERFAMILY SSF63411 232 468 1.03E-80 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 3.2E-81 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Gene3D G3DSA:3.30.830.10 239 468 3.8E-73 T 11-10-2018 AL538_04900 d2a0a920d27f53f77f1ca3a9824f1f84 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 2.2E-39 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01021 OMPA domain signature 215 237 5.5E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01021 OMPA domain signature 245 260 5.5E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01021 OMPA domain signature 260 276 5.5E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 Gene3D G3DSA:3.30.1330.60 207 323 1.4E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 SUPERFAMILY SSF103088 205 315 7.06E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 Pfam PF00691 OmpA family 214 309 3.1E-25 T 11-10-2018 IPR006665 OmpA-like domain AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 260 277 3.5E-10 T 11-10-2018 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 278 297 3.5E-10 T 11-10-2018 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 298 318 3.5E-10 T 11-10-2018 AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 SUPERFAMILY SSF56925 22 179 2.62E-33 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 Pfam PF13505 Outer membrane protein beta-barrel domain 6 179 2.2E-23 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_26165 9c212c08945ca027aa1ce959dadce9c0 327 Gene3D G3DSA:2.40.160.20 9 206 3.2E-42 T 11-10-2018 AL538_09540 52809d942ecce88697151d13a28f8a8e 94 Pfam PF13710 ACT domain 12 73 2.6E-20 T 11-10-2018 AL538_09540 52809d942ecce88697151d13a28f8a8e 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 70 4.0E-4 T 11-10-2018 AL538_09540 52809d942ecce88697151d13a28f8a8e 94 SUPERFAMILY SSF55021 3 76 1.5E-10 T 11-10-2018 AL538_09540 52809d942ecce88697151d13a28f8a8e 94 Gene3D G3DSA:3.30.70.260 1 89 2.3E-11 T 11-10-2018 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 Gene3D G3DSA:1.10.287.1050 1 81 1.0E-20 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 PIRSF PIRSF002096 1 133 6.9E-43 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 SUPERFAMILY SSF81273 91 133 7.85E-11 T 11-10-2018 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 SMART SM00528 86 133 1.4E-22 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 SUPERFAMILY SSF81273 3 55 1.18E-11 T 11-10-2018 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 Pfam PF00816 H-NS histone family 37 126 3.2E-16 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL538_00085 88344e2340c2769b4a0cd9e2ab318eaa 133 Gene3D G3DSA:4.10.430.10 90 133 2.1E-20 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AL538_15255 a6db0200974e4a1270cd553eb038ef6d 124 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 1.3E-4 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_15255 a6db0200974e4a1270cd553eb038ef6d 124 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 121 2.8E-50 T 11-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 AL538_15255 a6db0200974e4a1270cd553eb038ef6d 124 SUPERFAMILY SSF69635 2 121 2.12E-45 T 11-10-2018 AL538_15255 a6db0200974e4a1270cd553eb038ef6d 124 Gene3D G3DSA:3.30.1460.10 1 124 1.3E-44 T 11-10-2018 AL538_26490 d4e65608c262bbce22cea2a230c8f18e 371 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 47 335 5.9E-39 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AL538_26490 d4e65608c262bbce22cea2a230c8f18e 371 Gene3D G3DSA:3.60.60.10 44 360 1.0E-72 T 11-10-2018 AL538_26490 d4e65608c262bbce22cea2a230c8f18e 371 SUPERFAMILY SSF56235 47 339 2.78E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_17795 71e80846093a2f2705c642309929264b 203 Pfam PF01810 LysE type translocator 13 202 3.8E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_17795 71e80846093a2f2705c642309929264b 203 PIRSF PIRSF006324 1 203 1.6E-48 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 Pfam PF00210 Ferritin-like domain 20 158 4.8E-24 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 5.3E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 5.3E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 5.3E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 SUPERFAMILY SSF47240 4 158 1.56E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 Gene3D G3DSA:1.20.1260.10 2 158 1.2E-53 T 11-10-2018 IPR012347 Ferritin-like AL538_22895 1ba8be09083c2724b276b3ee6fa9bd1d 159 PIRSF PIRSF005900 1 159 1.5E-45 T 11-10-2018 IPR002177 DNA-binding protein Dps AL538_12715 4454cdf3c3b3ee6d3b2575536a0df161 294 Gene3D G3DSA:3.40.50.10330 23 289 7.3E-94 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AL538_12715 4454cdf3c3b3ee6d3b2575536a0df161 294 Pfam PF01513 ATP-NAD kinase 8 273 6.2E-71 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL538_12715 4454cdf3c3b3ee6d3b2575536a0df161 294 SUPERFAMILY SSF111331 8 290 8.37E-94 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AL538_12715 4454cdf3c3b3ee6d3b2575536a0df161 294 Gene3D G3DSA:2.60.200.30 129 266 7.3E-94 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL538_12715 4454cdf3c3b3ee6d3b2575536a0df161 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.335 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AL538_19905 e2660c78d1be3e28d0896fab2f22d740 129 Gene3D G3DSA:3.10.180.10 1 128 4.8E-41 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_19905 e2660c78d1be3e28d0896fab2f22d740 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 1.6E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_19905 e2660c78d1be3e28d0896fab2f22d740 129 SUPERFAMILY SSF54593 3 128 2.42E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_03480 7b9d7a1bc989c646447b91c9f61e10ed 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 3.4E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AL538_03480 7b9d7a1bc989c646447b91c9f61e10ed 127 Gene3D G3DSA:3.30.1330.40 1 127 2.7E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_03480 7b9d7a1bc989c646447b91c9f61e10ed 127 Pfam PF01042 Endoribonuclease L-PSP 7 125 7.3E-43 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_03480 7b9d7a1bc989c646447b91c9f61e10ed 127 SUPERFAMILY SSF55298 2 126 7.38E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_18355 3a2c8339a8edcd8446d2e21815dad551 203 Pfam PF02630 SCO1/SenC 47 176 9.7E-30 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_18355 3a2c8339a8edcd8446d2e21815dad551 203 SUPERFAMILY SSF52833 47 195 6.66E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_18355 3a2c8339a8edcd8446d2e21815dad551 203 Gene3D G3DSA:3.40.30.10 23 197 3.6E-36 T 11-10-2018 AL538_19630 79e97276157542b75b715b36eaad112d 612 Gene3D G3DSA:3.40.50.300 351 604 3.2E-92 T 11-10-2018 AL538_19630 79e97276157542b75b715b36eaad112d 612 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19630 79e97276157542b75b715b36eaad112d 612 SMART SM00382 386 577 1.1E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_19630 79e97276157542b75b715b36eaad112d 612 Pfam PF00005 ABC transporter 378 531 1.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19630 79e97276157542b75b715b36eaad112d 612 SUPERFAMILY SSF90123 28 344 7.85E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_19630 79e97276157542b75b715b36eaad112d 612 Gene3D G3DSA:1.20.1560.10 8 335 4.9E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_19630 79e97276157542b75b715b36eaad112d 612 Pfam PF00664 ABC transporter transmembrane region 41 308 2.9E-17 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_19630 79e97276157542b75b715b36eaad112d 612 SUPERFAMILY SSF52540 353 601 3.06E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06115 ccfa0b466d00d6ab9808f3ca5478f907 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 3.7E-10 T 11-10-2018 AL538_06115 ccfa0b466d00d6ab9808f3ca5478f907 167 SUPERFAMILY SSF55729 1 127 4.97E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_06115 ccfa0b466d00d6ab9808f3ca5478f907 167 Gene3D G3DSA:3.40.630.30 1 167 1.3E-46 T 11-10-2018 AL538_24070 50ab3bc31be0b1b49001063dc33faa11 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.753 T 11-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AL538_24070 50ab3bc31be0b1b49001063dc33faa11 189 Pfam PF04264 YceI-like domain 25 183 1.6E-35 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL538_24070 50ab3bc31be0b1b49001063dc33faa11 189 Gene3D G3DSA:2.40.128.110 23 189 6.1E-49 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL538_24070 50ab3bc31be0b1b49001063dc33faa11 189 SUPERFAMILY SSF101874 23 188 1.96E-49 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AL538_24070 50ab3bc31be0b1b49001063dc33faa11 189 SMART SM00867 24 187 2.7E-62 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL538_23945 ce682e3f20fda8efe7b7948eba0d65c6 317 SUPERFAMILY SSF56219 7 314 1.1E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_23945 ce682e3f20fda8efe7b7948eba0d65c6 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 45 306 2.8E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_23945 ce682e3f20fda8efe7b7948eba0d65c6 317 Gene3D G3DSA:3.60.10.10 2 310 1.3E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 5.4E-94 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 Gene3D G3DSA:3.20.20.70 138 284 1.4E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 PIRSF PIRSF006250 16 295 1.5E-100 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 2.7E-27 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.4E-57 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 Gene3D G3DSA:3.90.1170.20 21 293 1.4E-125 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 SUPERFAMILY SSF51690 130 294 2.51E-59 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL538_06495 caaf1ffbf335585dbb29e16184bce25e 295 SUPERFAMILY SSF54675 15 128 1.96E-33 T 11-10-2018 AL538_24235 983482660871347aab8f71a21f83cc23 251 SUPERFAMILY SSF88713 7 249 5.56E-92 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL538_24235 983482660871347aab8f71a21f83cc23 251 Pfam PF03746 LamB/YcsF family 9 246 9.4E-95 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AL538_24235 983482660871347aab8f71a21f83cc23 251 Gene3D G3DSA:3.20.20.370 6 251 3.8E-98 T 11-10-2018 AL538_24235 983482660871347aab8f71a21f83cc23 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.301 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 Gene3D G3DSA:3.40.190.290 91 293 7.7E-66 T 11-10-2018 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 Gene3D G3DSA:1.10.10.10 3 86 1.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 Pfam PF03466 LysR substrate binding domain 89 289 2.8E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 6.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 SUPERFAMILY SSF53850 89 296 2.33E-45 T 11-10-2018 AL538_24720 e3361cfb5d1df02050df35186cf8b9a4 300 SUPERFAMILY SSF46785 3 111 1.36E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13825 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF55190 2 96 3.4E-22 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF47323 455 577 1.77E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.8E-162 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.40.50.620 108 454 1.7E-108 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_13825 d2285a999fe88b23118704f8a372c457 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.6E-200 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:1.10.730.10 455 577 1.0E-35 T 11-10-2018 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.172 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 SMART SM00836 461 577 2.1E-41 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL538_13825 d2285a999fe88b23118704f8a372c457 577 SMART SM01016 5 87 2.0E-28 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Gene3D G3DSA:3.30.1360.70 1 106 1.4E-33 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 Pfam PF05746 DALR anticodon binding domain 461 577 3.7E-36 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AL538_13825 d2285a999fe88b23118704f8a372c457 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_13825 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AL538_13825 d2285a999fe88b23118704f8a372c457 577 SUPERFAMILY SSF52374 111 454 1.29E-93 T 11-10-2018 AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 SMART SM00490 257 338 4.1E-31 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 SMART SM00487 20 219 3.5E-63 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 Gene3D G3DSA:3.40.50.300 215 424 7.2E-45 T 11-10-2018 AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 493 50.884 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 Pfam PF00270 DEAD/DEAH box helicase 26 194 2.9E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 Gene3D G3DSA:3.40.50.300 1 209 9.3E-77 T 11-10-2018 AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 SUPERFAMILY SSF52540 73 359 1.02E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21890 0d9facc71e86d44360df1ba712be4f64 526 Pfam PF00271 Helicase conserved C-terminal domain 232 338 6.6E-27 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_23360 718a307333f58f01a4a45c8b51a4b13d 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 3.1E-56 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_23360 718a307333f58f01a4a45c8b51a4b13d 168 PIRSF PIRSF028301 1 168 8.1E-63 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_23360 718a307333f58f01a4a45c8b51a4b13d 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 2.3E-58 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_21205 ccde0f098dfd1ab06a0e8615169ada2e 265 SUPERFAMILY SSF81301 11 131 7.36E-9 T 11-10-2018 AL538_21205 ccde0f098dfd1ab06a0e8615169ada2e 265 Pfam PF04439 Streptomycin adenylyltransferase 11 176 6.9E-6 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase AL538_21205 ccde0f098dfd1ab06a0e8615169ada2e 265 Gene3D G3DSA:3.30.460.10 10 141 2.0E-19 T 11-10-2018 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 SUPERFAMILY SSF46785 6 145 1.02E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 Gene3D G3DSA:1.10.10.10 2 146 6.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 SMART SM00347 33 134 2.1E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 Pfam PF01047 MarR family 46 97 6.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 5.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 5.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 5.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_15450 b518c99ca0b1e4d863e5bcaf956968fc 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 5.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01870 220cb0544ffad60c869f9335d2d04f7b 403 SUPERFAMILY SSF103473 9 395 3.27E-53 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_01870 220cb0544ffad60c869f9335d2d04f7b 403 Pfam PF07690 Major Facilitator Superfamily 16 352 5.5E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_01870 220cb0544ffad60c869f9335d2d04f7b 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_01870 220cb0544ffad60c869f9335d2d04f7b 403 Gene3D G3DSA:1.20.1250.20 5 390 2.5E-44 T 11-10-2018 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.559 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 SUPERFAMILY SSF50475 11 211 4.49E-64 T 11-10-2018 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 5.1E-89 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 9.5E-23 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 3.6E-19 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 Gene3D G3DSA:2.30.110.10 13 211 1.8E-75 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_19555 b27d5b565e7cdf952e5982f08f71af81 211 PIRSF PIRSF000190 1 211 4.6E-81 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 SUPERFAMILY SSF51419 27 284 1.74E-82 T 11-10-2018 IPR029066 PLP-binding barrel AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 2.9E-71 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 Gene3D G3DSA:2.40.37.10 17 404 5.0E-152 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 1.7E-167 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 SUPERFAMILY SSF50621 261 414 4.81E-53 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 5.2E-26 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.338 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_09125 c12bda4f3b5ca34413d7cf2745b93e18 417 Gene3D G3DSA:3.20.20.10 35 277 5.0E-152 T 11-10-2018 IPR029066 PLP-binding barrel AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 Gene3D G3DSA:3.40.190.10 81 176 7.4E-16 T 11-10-2018 AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 Gene3D G3DSA:3.40.190.10 179 265 1.5E-9 T 11-10-2018 AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 SUPERFAMILY SSF46785 1 87 1.26E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 Gene3D G3DSA:1.10.10.10 1 80 3.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 SUPERFAMILY SSF53850 87 291 9.34E-30 T 11-10-2018 AL538_09825 6b420f82af6322b8a5304e33a3b7f72c 296 Pfam PF03466 LysR substrate binding domain 87 289 3.2E-33 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_22065 04c4a650a3bced61742f847092d73730 106 PIRSF PIRSF029143 3 106 6.9E-47 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL538_22065 04c4a650a3bced61742f847092d73730 106 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 4 105 29.969 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL538_22065 04c4a650a3bced61742f847092d73730 106 SMART SM01022 8 106 2.7E-26 T 11-10-2018 IPR007374 ASCH domain AL538_22065 04c4a650a3bced61742f847092d73730 106 SUPERFAMILY SSF88697 5 105 7.95E-32 T 11-10-2018 IPR015947 PUA-like superfamily AL538_22065 04c4a650a3bced61742f847092d73730 106 Pfam PF04266 ASCH domain 9 105 1.1E-14 T 11-10-2018 IPR007374 ASCH domain AL538_22065 04c4a650a3bced61742f847092d73730 106 Gene3D G3DSA:2.30.130.30 3 105 2.2E-44 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Gene3D G3DSA:3.30.565.10 2 215 1.2E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Gene3D G3DSA:3.30.230.10 216 389 7.3E-58 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 11-10-2018 IPR006171 TOPRIM domain AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 SMART SM00433 34 622 2.5E-217 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Gene3D G3DSA:3.40.50.670 390 621 5.7E-93 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 SUPERFAMILY SSF54211 217 382 3.03E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 6.7E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 SUPERFAMILY SSF55874 5 215 2.73E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.0E-124 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.019 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 SMART SM00387 27 173 4.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Pfam PF00204 DNA gyrase B 218 384 1.2E-42 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-58 T 11-10-2018 AL538_11500 40d5c3075bc960560751da6dc5cb5a93 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-58 T 11-10-2018 AL538_01505 958d0b108ce2740442d1571a3a5c6324 319 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 319 158.085 T 11-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL538_01505 958d0b108ce2740442d1571a3a5c6324 319 Gene3D G3DSA:1.10.4200.10 60 309 2.2E-9 T 11-10-2018 AL538_01505 958d0b108ce2740442d1571a3a5c6324 319 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 34 305 2.5E-104 T 11-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL538_01505 958d0b108ce2740442d1571a3a5c6324 319 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 36 304 3.0E-80 T 11-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 4.3E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 Gene3D G3DSA:1.10.287.470 90 176 2.8E-54 T 11-10-2018 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 6.7E-35 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 Gene3D G3DSA:2.40.30.170 45 307 2.8E-54 T 11-10-2018 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 SUPERFAMILY SSF111369 49 254 9.81E-16 T 11-10-2018 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 Gene3D G3DSA:2.40.50.100 56 216 2.8E-54 T 11-10-2018 AL538_03615 00596237ae78320e83f42fe6ac96cd5a 378 Gene3D G3DSA:2.40.420.20 40 367 2.8E-54 T 11-10-2018 AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 Gene3D G3DSA:3.30.360.10 139 267 7.4E-95 T 11-10-2018 AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 SUPERFAMILY SSF55347 125 289 3.6E-36 T 11-10-2018 AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 SUPERFAMILY SSF51735 2 146 7.71E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 236 4.5E-14 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 Gene3D G3DSA:3.40.50.720 4 317 7.4E-95 T 11-10-2018 AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 5.3E-126 T 11-10-2018 IPR030827 Inositol 2-dehydrogenase AL538_18380 79b0c1d16a3fe9915d1dea87d0bcbd30 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 113 8.4E-19 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_19455 b0ab41c397bb40cd7c788e20bf0a7e3b 241 Gene3D G3DSA:2.40.160.90 115 241 1.5E-17 T 11-10-2018 AL538_19455 b0ab41c397bb40cd7c788e20bf0a7e3b 241 SUPERFAMILY SSF56925 91 240 2.75E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_19455 b0ab41c397bb40cd7c788e20bf0a7e3b 241 Pfam PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B 119 240 1.8E-9 T 11-10-2018 IPR001677 Transferrin-binding protein, C-lobe/N-lobe beta barrel domain AL538_22435 8a9520a33b0d04571b67e2edd5ca0eb6 425 SUPERFAMILY SSF51556 54 372 1.02E-104 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_22435 8a9520a33b0d04571b67e2edd5ca0eb6 425 Pfam PF07969 Amidohydrolase family 43 403 4.6E-53 T 11-10-2018 IPR013108 Amidohydrolase 3 AL538_22435 8a9520a33b0d04571b67e2edd5ca0eb6 425 Gene3D G3DSA:2.30.40.10 8 409 2.7E-177 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_22435 8a9520a33b0d04571b67e2edd5ca0eb6 425 Gene3D G3DSA:3.20.20.140 55 362 2.7E-177 T 11-10-2018 AL538_22435 8a9520a33b0d04571b67e2edd5ca0eb6 425 SUPERFAMILY SSF51338 1 76 6.48E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_23510 aec032ae9bb04cd22492a3363879496e 323 SUPERFAMILY SSF81345 4 319 3.01E-81 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_23510 aec032ae9bb04cd22492a3363879496e 323 Pfam PF01032 FecCD transport family 15 319 9.8E-95 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_23510 aec032ae9bb04cd22492a3363879496e 323 Gene3D G3DSA:1.10.3470.10 2 322 1.0E-96 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF49452 19 171 2.0E-28 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Gene3D G3DSA:2.60.40.1130 181 296 6.8E-31 T 11-10-2018 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 3.7E-17 T 11-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF51011 978 1092 5.18E-39 T 11-10-2018 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Gene3D G3DSA:2.60.40.10 303 409 4.6E-30 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF51445 407 975 2.84E-127 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SMART SM00642 552 948 8.4E-4 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 2.1E-63 T 11-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 11-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Gene3D G3DSA:2.60.40.1180 1010 1093 5.7E-27 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF81296 309 412 2.8E-21 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Gene3D G3DSA:3.20.20.80 410 1009 2.9E-216 T 11-10-2018 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF81296 1102 1148 5.6E-5 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 1.9E-13 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 SUPERFAMILY SSF81296 171 296 2.66E-30 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_18495 3a3b47ef45f92ba39da9c48fdf0873b9 1329 Gene3D G3DSA:2.60.40.1110 34 170 1.1E-29 T 11-10-2018 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 Gene3D G3DSA:1.10.10.60 428 485 2.3E-23 T 11-10-2018 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 PIRSF PIRSF000774 1 488 2.6E-152 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 Pfam PF04963 Sigma-54 factor, core binding domain 127 316 3.5E-60 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 PRINTS PR00045 Sigma-54 factor signature 403 414 7.6E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 PRINTS PR00045 Sigma-54 factor signature 387 399 7.6E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 PRINTS PR00045 Sigma-54 factor signature 199 216 7.6E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 PRINTS PR00045 Sigma-54 factor signature 461 479 7.6E-32 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 Gene3D G3DSA:1.10.10.1330 129 250 1.0E-25 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 3.0E-157 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AL538_07370 02af0aff38775ba7e27f9b9e1d4c9115 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 3.8E-72 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 660 677 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 Gene3D G3DSA:2.40.170.20 142 677 3.8E-76 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 SUPERFAMILY SSF56935 18 677 1.39E-81 T 11-10-2018 AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 134 2.5E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 Gene3D G3DSA:2.170.130.10 33 140 1.2E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_19915 c9258c5a27247433a08a5ee7a07a7476 677 Pfam PF00593 TonB dependent receptor 246 676 7.8E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_05315 ee3f4b9a77b2ed18598607d181b0078e 281 Gene3D G3DSA:3.60.20.10 1 259 5.2E-99 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_05315 ee3f4b9a77b2ed18598607d181b0078e 281 SUPERFAMILY SSF56235 2 253 1.46E-51 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_05315 ee3f4b9a77b2ed18598607d181b0078e 281 Pfam PF13230 Glutamine amidotransferases class-II 1 259 3.8E-114 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Pfam PF00210 Ferritin-like domain 8 143 9.7E-41 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.1E-82 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 23 43 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 86 106 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 44 64 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 107 127 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 3 22 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 65 85 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PRINTS PR00601 Bacterioferritin signature 128 149 6.3E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 SUPERFAMILY SSF47240 1 153 6.67E-56 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 Gene3D G3DSA:1.20.1260.10 1 158 5.1E-72 T 11-10-2018 IPR012347 Ferritin-like AL538_07875 0839bf8a2cc26b968ea83f0a6f7dd7e3 158 PIRSF PIRSF002560 1 157 1.1E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 591 1.1E-267 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 SUPERFAMILY SSF89000 297 462 9.42E-51 T 11-10-2018 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 SUPERFAMILY SSF51569 1 300 5.68E-89 T 11-10-2018 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 SUPERFAMILY SSF51230 519 596 1.7E-20 T 11-10-2018 IPR011053 Single hybrid motif AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 Pfam PF00364 Biotin-requiring enzyme 531 595 8.0E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 Gene3D G3DSA:3.20.20.70 1 464 5.8E-172 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 553 570 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 Pfam PF00682 HMGL-like 6 270 1.2E-59 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 Pfam PF02436 Conserved carboxylase domain 292 495 3.5E-58 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL538_06610 ed2d781c09d19b7ed18e160ce3aa1a4b 597 Gene3D G3DSA:2.40.50.100 524 597 9.5E-23 T 11-10-2018 AL538_25850 64aef4cf72a683ef3982add22578d912 560 SUPERFAMILY SSF52172 12 147 2.13E-24 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25850 64aef4cf72a683ef3982add22578d912 560 SMART SM00448 14 132 2.3E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25850 64aef4cf72a683ef3982add22578d912 560 SUPERFAMILY SSF48452 176 304 3.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25850 64aef4cf72a683ef3982add22578d912 560 Gene3D G3DSA:1.25.40.10 141 308 9.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25850 64aef4cf72a683ef3982add22578d912 560 PIRSF PIRSF011521 7 548 4.3E-184 T 11-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB AL538_25850 64aef4cf72a683ef3982add22578d912 560 Gene3D G3DSA:3.40.50.2300 3 140 8.4E-22 T 11-10-2018 AL538_25850 64aef4cf72a683ef3982add22578d912 560 Pfam PF00072 Response regulator receiver domain 16 132 7.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 SUPERFAMILY SSF51905 15 329 1.57E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 1.4E-28 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 1.4E-28 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 1.4E-28 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 1.4E-28 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.4E-28 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PIRSF PIRSF000350 2 473 5.2E-70 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 12 476 65.199 T 11-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 SUPERFAMILY SSF55424 354 473 1.89E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 467 9.9E-30 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.30.390.30 355 474 1.9E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.50.50.60 168 286 2.0E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Gene3D G3DSA:3.50.50.60 17 343 2.0E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 66 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 6.6E-52 T 11-10-2018 AL538_08930 c21b0287b4aa0e14c1377893cba2e21e 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 336 1.2E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Gene3D G3DSA:3.30.70.20 136 186 5.4E-9 T 11-10-2018 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 PIRSF PIRSF005784 3 188 1.4E-86 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Pfam PF04060 Putative Fe-S cluster 44 75 7.0E-15 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 4.2E-87 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Gene3D G3DSA:1.10.15.40 38 87 5.4E-8 T 11-10-2018 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.2E-18 T 11-10-2018 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 SUPERFAMILY SSF54862 37 173 9.95E-31 T 11-10-2018 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Gene3D G3DSA:3.30.70.20 91 132 5.4E-6 T 11-10-2018 AL538_04150 c45c0e69ab4dae636974a3ba25aa2ada 197 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.169 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 AL538_20200 17d3fd09067b3f184d49ddd595a739d0 123 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 119 5.3E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_20200 17d3fd09067b3f184d49ddd595a739d0 123 Gene3D G3DSA:1.10.760.10 26 123 4.2E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_20200 17d3fd09067b3f184d49ddd595a739d0 123 PRINTS PR00605 Class IC cytochrome C signature 97 119 2.6E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_20200 17d3fd09067b3f184d49ddd595a739d0 123 PRINTS PR00605 Class IC cytochrome C signature 44 55 2.6E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AL538_20200 17d3fd09067b3f184d49ddd595a739d0 123 SUPERFAMILY SSF46626 22 122 4.09E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 PIRSF PIRSF006769 9 372 2.5E-118 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 SUPERFAMILY SSF53597 155 366 2.66E-52 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 Pfam PF01872 RibD C-terminal domain 158 360 4.1E-47 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 Gene3D G3DSA:3.40.140.10 3 151 5.0E-47 T 11-10-2018 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 Gene3D G3DSA:3.40.430.10 152 373 9.0E-63 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 1.0E-122 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 110 7.9E-21 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 3.4E-52 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AL538_12850 24f51d33b27ed078205b8c84c50ad780 374 SUPERFAMILY SSF53927 14 156 5.02E-48 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_26630 967ece4911f16d486448a9e026e36d76 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 9.9E-23 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_26630 967ece4911f16d486448a9e026e36d76 130 Gene3D G3DSA:3.30.1330.40 16 129 4.4E-32 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_26630 967ece4911f16d486448a9e026e36d76 130 SUPERFAMILY SSF55298 18 127 2.83E-31 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_06685 123d5b489091169c7a969221b35539fb 155 Gene3D G3DSA:1.10.10.10 104 151 1.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06685 123d5b489091169c7a969221b35539fb 155 Pfam PF02631 RecX family 34 150 1.8E-29 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AL538_06685 123d5b489091169c7a969221b35539fb 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.725 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AL538_06685 123d5b489091169c7a969221b35539fb 155 Gene3D G3DSA:1.10.10.10 58 101 1.2E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06685 123d5b489091169c7a969221b35539fb 155 Gene3D G3DSA:1.10.10.10 11 50 5.8E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10360 01992779f860c26358a532f30014b5d3 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_10360 01992779f860c26358a532f30014b5d3 430 Gene3D G3DSA:1.10.287.130 167 277 1.7E-23 T 11-10-2018 AL538_10360 01992779f860c26358a532f30014b5d3 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 4.5E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_10360 01992779f860c26358a532f30014b5d3 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_10360 01992779f860c26358a532f30014b5d3 430 Pfam PF00672 HAMP domain 169 217 6.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_10360 01992779f860c26358a532f30014b5d3 430 SMART SM00304 169 221 4.6E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_10360 01992779f860c26358a532f30014b5d3 430 SMART SM00387 321 430 1.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_10360 01992779f860c26358a532f30014b5d3 430 SUPERFAMILY SSF55874 285 429 5.11E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_10360 01992779f860c26358a532f30014b5d3 430 SMART SM00388 222 282 2.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_10360 01992779f860c26358a532f30014b5d3 430 Gene3D G3DSA:3.30.565.10 284 430 4.9E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_10360 01992779f860c26358a532f30014b5d3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_10360 01992779f860c26358a532f30014b5d3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_10360 01992779f860c26358a532f30014b5d3 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 3.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_04565 2f602a17f9db116ff782359a2668d545 371 SUPERFAMILY SSF55347 133 354 1.87E-77 T 11-10-2018 AL538_04565 2f602a17f9db116ff782359a2668d545 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 4.1E-187 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_04565 2f602a17f9db116ff782359a2668d545 371 Gene3D G3DSA:3.30.360.10 134 350 4.7E-144 T 11-10-2018 AL538_04565 2f602a17f9db116ff782359a2668d545 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 120 5.1E-22 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_04565 2f602a17f9db116ff782359a2668d545 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.475 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_04565 2f602a17f9db116ff782359a2668d545 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.2E-56 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_04565 2f602a17f9db116ff782359a2668d545 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_04565 2f602a17f9db116ff782359a2668d545 371 Gene3D G3DSA:3.40.50.720 3 356 4.7E-144 T 11-10-2018 AL538_04565 2f602a17f9db116ff782359a2668d545 371 SUPERFAMILY SSF51735 1 146 3.58E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04565 2f602a17f9db116ff782359a2668d545 371 PIRSF PIRSF000148 1 371 9.6E-65 T 11-10-2018 AL538_04565 2f602a17f9db116ff782359a2668d545 371 SMART SM00859 2 121 4.7E-24 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 7.8E-37 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 Gene3D G3DSA:3.40.930.10 2 148 2.3E-43 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 6.3E-38 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 3.0E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 SUPERFAMILY SSF52794 525 618 3.49E-29 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 1.2E-27 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 SUPERFAMILY SSF55804 1 148 6.8E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 Pfam PF02378 Phosphotransferase system, EIIC 189 446 8.5E-12 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 Gene3D G3DSA:3.40.50.2300 519 622 4.5E-34 T 11-10-2018 AL538_22025 5c36fe6a40478b3d0de4419762a45dae 623 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 177 497 5.9E-77 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 Gene3D G3DSA:2.30.110.50 15 335 1.4E-63 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 Gene3D G3DSA:2.40.50.230 363 465 5.9E-43 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 Gene3D G3DSA:3.55.50.10 109 199 1.4E-63 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 7.2E-164 T 11-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 SUPERFAMILY SSF69279 199 371 2.38E-12 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 SUPERFAMILY SSF69279 12 195 1.98E-41 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 Pfam PF05954 Phage late control gene D protein (GPD) 31 335 2.1E-65 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 Gene3D G3DSA:3.30.1920.30 230 293 1.4E-63 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 SUPERFAMILY SSF69349 450 602 8.63E-36 T 11-10-2018 AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 3.7E-108 T 11-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL538_24855 7c3d68ff8efa24465e0457d2bf57b614 611 SUPERFAMILY SSF69255 372 460 1.39E-33 T 11-10-2018 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 SUPERFAMILY SSF46894 153 250 1.96E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 249 2.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 SMART SM00448 20 131 5.3E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 Gene3D G3DSA:3.40.50.2300 5 139 5.0E-36 T 11-10-2018 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 SMART SM00862 173 249 5.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 SUPERFAMILY SSF52172 21 152 2.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 Gene3D G3DSA:1.10.10.10 140 253 6.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21475 e569a9bc57d31d80f81a8aff95423444 253 Pfam PF00072 Response regulator receiver domain 22 131 2.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17430 7438eb9f6faeb0f8a3c880e01601bbef 329 SMART SM00587 112 269 6.6E-4 T 11-10-2018 IPR015897 CHK kinase-like AL538_17430 7438eb9f6faeb0f8a3c880e01601bbef 329 Pfam PF01636 Phosphotransferase enzyme family 38 240 1.0E-9 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL538_17430 7438eb9f6faeb0f8a3c880e01601bbef 329 Gene3D G3DSA:3.90.1200.10 122 300 1.4E-6 T 11-10-2018 AL538_17430 7438eb9f6faeb0f8a3c880e01601bbef 329 SUPERFAMILY SSF56112 31 278 1.36E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_16915 b64f969b2625e25256c240b3f817f26a 238 Gene3D G3DSA:1.10.510.10 22 236 8.0E-24 T 11-10-2018 AL538_16915 b64f969b2625e25256c240b3f817f26a 238 SUPERFAMILY SSF56112 24 230 2.83E-25 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_16915 b64f969b2625e25256c240b3f817f26a 238 Pfam PF00069 Protein kinase domain 25 198 2.6E-16 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_16915 b64f969b2625e25256c240b3f817f26a 238 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 118 130 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL538_16915 b64f969b2625e25256c240b3f817f26a 238 SMART SM00220 15 237 1.6E-5 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_10845 4ca440efbe14af193e53dc561e300836 92 PIRSF PIRSF002144 1 92 2.0E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.3E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.3E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.3E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 SUPERFAMILY SSF54570 3 84 2.49E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 Gene3D G3DSA:3.30.860.10 1 92 1.0E-43 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.68 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10845 4ca440efbe14af193e53dc561e300836 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.3E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL538_21695 8ad3eda43abce3acc6590008e8648c87 539 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 48 526 1.3E-143 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_19260 0551879e53bc32b6ef3eec5d374251f1 285 Pfam PF00005 ABC transporter 21 158 3.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19260 0551879e53bc32b6ef3eec5d374251f1 285 Gene3D G3DSA:3.40.50.300 2 248 1.1E-45 T 11-10-2018 AL538_19260 0551879e53bc32b6ef3eec5d374251f1 285 SUPERFAMILY SSF52540 4 222 5.22E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19260 0551879e53bc32b6ef3eec5d374251f1 285 SMART SM00382 30 208 4.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 Gene3D G3DSA:3.40.50.300 227 500 1.9E-127 T 11-10-2018 AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 SMART SM00382 253 376 5.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 Pfam PF00437 Type II/IV secretion system protein 127 392 2.5E-91 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 SUPERFAMILY SSF52540 107 497 3.83E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 SUPERFAMILY SSF160246 12 78 2.62E-17 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 8.0E-228 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 Gene3D G3DSA:3.30.300.160 1 78 3.6E-39 T 11-10-2018 AL538_10260 4f733cd6bb60f2db5d156d882393abff 500 Gene3D G3DSA:3.30.450.90 88 225 1.1E-55 T 11-10-2018 AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 SUPERFAMILY SSF100950 2 215 1.63E-76 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 Gene3D G3DSA:3.40.1080.10 1 217 9.4E-78 T 11-10-2018 AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 SMART SM00882 4 215 6.2E-69 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 3 213 7.4E-67 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 Pfam PF01144 Coenzyme A transferase 7 214 3.2E-67 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AL538_18450 c662163dcb2b6b9b1f03ead2adaf38c9 217 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 425 589 2.7E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 SUPERFAMILY SSF58104 314 623 7.85E-77 T 11-10-2018 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Gene3D G3DSA:1.10.287.950 291 623 1.3E-72 T 11-10-2018 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Pfam PF02743 Cache domain 33 253 1.4E-30 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Gene3D G3DSA:3.30.450.20 49 265 2.4E-70 T 11-10-2018 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Gene3D G3DSA:3.30.450.20 62 173 2.4E-70 T 11-10-2018 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 SUPERFAMILY SSF103190 50 184 9.42E-23 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 SMART SM00304 292 346 1.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 Pfam PF00672 HAMP domain 292 343 3.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_26310 5131c4b1b631bb3ba8b5138d78c02a75 623 SMART SM00283 361 622 4.7E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_02940 684c8e4ba8e206001a9e73de31dbb2f8 195 Gene3D G3DSA:1.10.3210.10 1 195 5.0E-53 T 11-10-2018 AL538_02940 684c8e4ba8e206001a9e73de31dbb2f8 195 Pfam PF13023 HD domain 15 172 6.8E-52 T 11-10-2018 IPR006674 HD domain AL538_02940 684c8e4ba8e206001a9e73de31dbb2f8 195 SUPERFAMILY SSF109604 4 181 2.02E-43 T 11-10-2018 AL538_11795 0b3737bac2d753a148b4901d66536cd5 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 3.3E-18 T 11-10-2018 IPR021710 Protein of unknown function DUF3293 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Gene3D G3DSA:1.10.287.130 177 288 1.9E-25 T 11-10-2018 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SUPERFAMILY SSF158472 173 226 4.58E-7 T 11-10-2018 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Gene3D G3DSA:3.30.565.10 289 444 4.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Gene3D G3DSA:3.30.450.170 26 145 4.4E-27 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SMART SM00304 173 228 3.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SUPERFAMILY SSF47384 213 291 1.02E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 444 5.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SMART SM00388 229 291 3.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SUPERFAMILY SSF55874 281 444 1.02E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Pfam PF00672 HAMP domain 173 222 6.2E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 2.5E-28 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 SMART SM00387 335 446 1.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23065 8625be4b6c23728b97a1c12ae94abc47 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 5.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Gene3D G3DSA:3.30.1360.120 1 120 5.6E-39 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 SUPERFAMILY SSF116878 120 453 2.75E-52 T 11-10-2018 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 SUPERFAMILY SSF52540 70 371 5.58E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.85 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Pfam PF12631 MnmE helical domain 122 450 3.0E-61 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 368 2.2E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 6.6E-101 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Gene3D G3DSA:3.40.50.300 216 381 6.6E-103 T 11-10-2018 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 2.3E-35 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AL538_09655 067bdc4f173f81b4e963901609a395fb 453 Gene3D G3DSA:1.20.120.430 121 453 6.6E-103 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 Gene3D G3DSA:1.10.10.10 8 56 2.1E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 SMART SM01134 74 232 1.6E-41 T 11-10-2018 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 SMART SM00420 6 58 2.3E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 7.0E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 1.7E-39 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 SUPERFAMILY SSF100950 75 234 1.88E-24 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 SUPERFAMILY SSF46785 5 62 1.43E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.1E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_19100 9eff90c35a87ecb9023128899a05a6c1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.1E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_04355 6c4f91d83a2bc40d9923e345cccfcbfe 315 Pfam PF00892 EamA-like transporter family 17 148 1.9E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_04355 6c4f91d83a2bc40d9923e345cccfcbfe 315 Pfam PF00892 EamA-like transporter family 161 293 4.0E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_04355 6c4f91d83a2bc40d9923e345cccfcbfe 315 SUPERFAMILY SSF103481 224 299 6.15E-5 T 11-10-2018 AL538_04355 6c4f91d83a2bc40d9923e345cccfcbfe 315 SUPERFAMILY SSF103481 52 151 7.85E-11 T 11-10-2018 AL538_05870 841a229fd085a329249015aee75fe8f8 110 Gene3D G3DSA:2.40.50.140 1 110 2.6E-38 T 11-10-2018 AL538_05870 841a229fd085a329249015aee75fe8f8 110 SUPERFAMILY SSF50249 8 109 1.4E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_05870 841a229fd085a329249015aee75fe8f8 110 Pfam PF01588 Putative tRNA binding domain 14 107 1.5E-30 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 268 4.7E-114 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 Pfam PF00005 ABC transporter 38 193 1.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 Gene3D G3DSA:3.40.50.300 20 265 2.3E-69 T 11-10-2018 AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 SMART SM00382 47 257 3.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 SUPERFAMILY SSF52540 21 262 3.36E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17165 629aa2099e74136231c60e5d31ef6ae2 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00365 1dbdf6e9b0d89ea6a3c2e6b0716dc3db 162 SUPERFAMILY SSF48452 41 134 8.44E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_00365 1dbdf6e9b0d89ea6a3c2e6b0716dc3db 162 Gene3D G3DSA:1.25.40.10 8 158 9.5E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20115 6a1606a3f94692ad6d72030f2c72b408 209 SMART SM00857 3 134 3.4E-8 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_20115 6a1606a3f94692ad6d72030f2c72b408 209 Pfam PF00239 Resolvase, N terminal domain 4 137 1.4E-15 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_20115 6a1606a3f94692ad6d72030f2c72b408 209 Pfam PF13384 Homeodomain-like domain 152 194 3.7E-6 T 11-10-2018 AL538_20115 6a1606a3f94692ad6d72030f2c72b408 209 Gene3D G3DSA:3.40.50.1390 3 123 3.1E-14 T 11-10-2018 AL538_20115 6a1606a3f94692ad6d72030f2c72b408 209 SUPERFAMILY SSF53041 1 137 4.19E-18 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 500 4.8E-10 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 Gene3D G3DSA:3.50.50.60 17 378 3.1E-142 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 Gene3D G3DSA:1.10.8.870 404 475 3.9E-13 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 2.1E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 SUPERFAMILY SSF51905 16 387 5.76E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AL538_05845 6640c911d21e80a2b167fb90a690b40d 519 Gene3D G3DSA:3.30.9.10 94 332 3.1E-142 T 11-10-2018 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Pfam PF01042 Endoribonuclease L-PSP 161 272 1.2E-25 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Pfam PF01042 Endoribonuclease L-PSP 18 128 2.8E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Pfam PF01042 Endoribonuclease L-PSP 310 410 2.4E-20 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 SUPERFAMILY SSF55298 158 281 5.18E-31 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Gene3D G3DSA:3.30.1330.40 290 416 9.5E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 SUPERFAMILY SSF55298 15 136 3.3E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Gene3D G3DSA:3.30.1330.40 4 134 5.8E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 Gene3D G3DSA:3.30.1330.40 143 277 5.1E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19135 a813852bd906b4ba762e73c3167d6672 421 SUPERFAMILY SSF55298 305 415 8.17E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 733 984 1.5E-47 T 11-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 SUPERFAMILY SSF52540 262 696 2.22E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:3.90.1570.50 10 234 8.1E-77 T 11-10-2018 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 10 190 1.6E-32 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Pfam PF04851 Type III restriction enzyme, res subunit 241 447 3.5E-34 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:3.40.50.300 240 343 4.3E-6 T 11-10-2018 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 SMART SM00487 239 481 7.3E-18 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:3.90.640.50 35 101 8.1E-77 T 11-10-2018 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:1.20.58.910 729 814 4.6E-26 T 11-10-2018 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:3.40.50.300 345 478 6.2E-26 T 11-10-2018 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 SUPERFAMILY SSF52540 236 448 6.08E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 13 725 3.4E-142 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AL538_13970 50182be167eb37b4a0fb2394fd9437de 989 Gene3D G3DSA:3.40.50.300 479 728 2.0E-84 T 11-10-2018 AL538_05215 66f482c5c5fd53b03ee6b41a1389583f 95 Gene3D G3DSA:1.10.10.10 2 95 1.9E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05215 66f482c5c5fd53b03ee6b41a1389583f 95 Pfam PF09904 Winged helix-turn helix 4 91 2.1E-37 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL538_05215 66f482c5c5fd53b03ee6b41a1389583f 95 PIRSF PIRSF037266 1 94 1.4E-40 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 AL538_03450 75b5539fac1ebbaa9e6d8b80818d4108 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 2.6E-18 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AL538_17540 079c86ecfe2668509d3cd2c4c4c693bf 330 Gene3D G3DSA:3.40.190.10 244 329 1.2E-5 T 11-10-2018 AL538_17540 079c86ecfe2668509d3cd2c4c4c693bf 330 Gene3D G3DSA:3.40.190.100 112 243 1.3E-28 T 11-10-2018 AL538_17540 079c86ecfe2668509d3cd2c4c4c693bf 330 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 308 1.3E-61 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AL538_17540 079c86ecfe2668509d3cd2c4c4c693bf 330 SUPERFAMILY SSF53850 21 325 2.42E-70 T 11-10-2018 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 SUPERFAMILY SSF46689 7 83 9.98E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 Gene3D G3DSA:1.10.357.10 1 193 1.0E-73 T 11-10-2018 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.2E-18 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_09850 b2a4fe78d105aa37aec7fda1f40183d9 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_26485 b9604a6ede31f63860496699aac41b6d 297 Pfam PF03466 LysR substrate binding domain 114 293 1.3E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26485 b9604a6ede31f63860496699aac41b6d 297 SUPERFAMILY SSF46785 5 89 1.9E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26485 b9604a6ede31f63860496699aac41b6d 297 SUPERFAMILY SSF53850 95 295 1.36E-16 T 11-10-2018 AL538_26485 b9604a6ede31f63860496699aac41b6d 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.8E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26485 b9604a6ede31f63860496699aac41b6d 297 Gene3D G3DSA:3.40.190.290 95 295 2.1E-16 T 11-10-2018 AL538_26485 b9604a6ede31f63860496699aac41b6d 297 Gene3D G3DSA:1.10.10.10 3 86 2.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18035 59ae94464e4085ababab74649918d38e 291 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 5 284 1.1E-37 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_18035 59ae94464e4085ababab74649918d38e 291 SUPERFAMILY SSF53187 3 287 1.98E-72 T 11-10-2018 AL538_18035 59ae94464e4085ababab74649918d38e 291 Gene3D G3DSA:2.20.25.160 214 261 2.1E-87 T 11-10-2018 AL538_18035 59ae94464e4085ababab74649918d38e 291 Gene3D G3DSA:3.40.630.10 6 284 2.1E-87 T 11-10-2018 AL538_18035 59ae94464e4085ababab74649918d38e 291 Hamap MF_00704 Probable aspartoacylase. 2 289 29.158 T 11-10-2018 IPR016708 Aspartoacylase GO:0016811 AL538_18035 59ae94464e4085ababab74649918d38e 291 PIRSF PIRSF018001 1 290 7.0E-58 T 11-10-2018 IPR016708 Aspartoacylase GO:0016811 AL538_17090 72ca8abb309b0924d4ac231e226aa797 436 SUPERFAMILY SSF56954 23 430 3.27E-88 T 11-10-2018 AL538_17090 72ca8abb309b0924d4ac231e226aa797 436 Pfam PF02321 Outer membrane efflux protein 24 200 7.8E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_17090 72ca8abb309b0924d4ac231e226aa797 436 Pfam PF02321 Outer membrane efflux protein 233 416 4.2E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_17090 72ca8abb309b0924d4ac231e226aa797 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 2.8E-121 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AL538_17090 72ca8abb309b0924d4ac231e226aa797 436 Gene3D G3DSA:1.20.1600.10 22 428 6.3E-82 T 11-10-2018 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 SUPERFAMILY SSF54631 275 397 4.61E-13 T 11-10-2018 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 Gene3D G3DSA:3.40.50.300 32 270 1.0E-69 T 11-10-2018 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 SUPERFAMILY SSF52540 39 265 1.83E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 Gene3D G3DSA:3.10.580.10 275 394 3.4E-8 T 11-10-2018 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 395 1.6E-125 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 SMART SM00382 54 243 2.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_17550 35edc8ce89462a369c2e77ef33aa8430 413 Pfam PF00005 ABC transporter 45 193 5.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_07750 ad0f70c563c64427e772bfbdac456de5 500 Gene3D G3DSA:3.30.70.1070 401 497 4.0E-24 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_07750 ad0f70c563c64427e772bfbdac456de5 500 Pfam PF05036 Sporulation related domain 413 486 2.5E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_07750 ad0f70c563c64427e772bfbdac456de5 500 Gene3D G3DSA:3.40.50.300 10 161 2.9E-6 T 11-10-2018 AL538_07750 ad0f70c563c64427e772bfbdac456de5 500 Pfam PF13401 AAA domain 28 147 4.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07750 ad0f70c563c64427e772bfbdac456de5 500 SUPERFAMILY SSF52540 14 221 4.4E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Gene3D G3DSA:3.30.1490.20 7 198 4.1E-72 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Gene3D G3DSA:3.30.470.20 199 362 7.3E-59 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 PIRSF PIRSF000854 5 795 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 SUPERFAMILY SSF56059 6 389 2.24E-108 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 SUPERFAMILY SSF51621 466 792 1.46E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 786 7.9E-63 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 2.2E-119 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 8.9E-6 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 8.9E-6 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 8.9E-6 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Gene3D G3DSA:3.20.20.60 483 793 4.5E-105 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 390 460 1.8E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 Gene3D G3DSA:3.50.30.10 363 482 3.1E-41 T 11-10-2018 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 794 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 AL538_21780 12203adb45b69fdd3234ff9a5ff17648 795 SUPERFAMILY SSF52009 354 472 1.22E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 Gene3D G3DSA:2.40.170.20 181 740 1.9E-115 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 Gene3D G3DSA:2.170.130.10 40 177 3.3E-40 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 Pfam PF00593 TonB dependent receptor 272 738 1.3E-47 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.4E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 SUPERFAMILY SSF56935 25 740 5.98E-134 T 11-10-2018 AL538_16585 5f013f55a03477f790627a7cdd8d9e93 740 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 739 1.7E-107 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_26055 01ee5788844f3a9a31943ca0ad333c5b 146 SUPERFAMILY SSF55785 10 127 7.5E-12 T 11-10-2018 IPR035965 PAS domain superfamily AL538_26055 01ee5788844f3a9a31943ca0ad333c5b 146 Pfam PF00989 PAS fold 16 134 1.1E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_26055 01ee5788844f3a9a31943ca0ad333c5b 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 136 8.4E-6 T 11-10-2018 IPR000014 PAS domain AL538_26055 01ee5788844f3a9a31943ca0ad333c5b 146 Gene3D G3DSA:3.30.450.20 6 140 1.5E-31 T 11-10-2018 AL538_07940 4d715330093a0a27b76390fb8245c062 313 Gene3D G3DSA:3.60.20.30 178 313 7.0E-47 T 11-10-2018 AL538_07940 4d715330093a0a27b76390fb8245c062 313 SUPERFAMILY SSF56235 5 309 3.79E-97 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_07940 4d715330093a0a27b76390fb8245c062 313 Pfam PF01112 Asparaginase 7 310 1.9E-109 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 Pfam PF12833 Helix-turn-helix domain 193 269 3.7E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 Pfam PF12852 Cupin 2 154 1.5E-25 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 Gene3D G3DSA:1.10.10.60 171 228 8.5E-9 T 11-10-2018 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 SMART SM00342 186 268 1.0E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 SUPERFAMILY SSF46689 222 270 6.72E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 264 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 SUPERFAMILY SSF46689 169 220 7.17E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 Gene3D G3DSA:1.10.10.60 229 275 3.0E-9 T 11-10-2018 AL538_25070 5851d21dd4f7ae009dd2b78a72cf5e44 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 171 215 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_16630 5663859f643db8b7e3606b40e57615ad 325 Gene3D G3DSA:3.40.50.720 1 122 4.8E-30 T 11-10-2018 AL538_16630 5663859f643db8b7e3606b40e57615ad 325 SUPERFAMILY SSF55347 125 293 2.78E-19 T 11-10-2018 AL538_16630 5663859f643db8b7e3606b40e57615ad 325 Gene3D G3DSA:3.30.360.10 123 324 1.3E-27 T 11-10-2018 AL538_16630 5663859f643db8b7e3606b40e57615ad 325 SUPERFAMILY SSF51735 2 150 6.22E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_16630 5663859f643db8b7e3606b40e57615ad 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 7.2E-19 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_00835 82d810ded6edb733431c83ec57646301 57 Pfam PF04957 Ribosome modulation factor 1 54 2.4E-28 T 11-10-2018 IPR007040 Ribosome modulation factor AL538_00835 82d810ded6edb733431c83ec57646301 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.031 T 11-10-2018 IPR007040 Ribosome modulation factor AL538_00835 82d810ded6edb733431c83ec57646301 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 2.0E-22 T 11-10-2018 IPR007040 Ribosome modulation factor AL538_00835 82d810ded6edb733431c83ec57646301 57 Gene3D G3DSA:1.10.10.620 1 57 4.0E-29 T 11-10-2018 IPR023200 Ribosome modulation factor domain superfamily AL538_16175 1326b580d3dee674a07d6bd201c1c896 431 Pfam PF14067 LssY C-terminus 248 384 4.1E-39 T 11-10-2018 IPR025902 LssY-like C-terminal domain AL538_16175 1326b580d3dee674a07d6bd201c1c896 431 Pfam PF09335 SNARE associated Golgi protein 23 147 4.8E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 SUPERFAMILY SSF48179 283 486 7.82E-65 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 Gene3D G3DSA:1.10.1040.10 282 487 1.3E-74 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 6.1E-52 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 Gene3D G3DSA:3.40.50.720 7 281 1.5E-110 T 11-10-2018 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 1.5E-90 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 SUPERFAMILY SSF51735 5 281 3.66E-99 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_19775 ba120961ce9ac07f989baaa87ee02e63 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 4.3E-21 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AL538_08820 de60db4f9263aea7871a79740f865847 617 Pfam PF00593 TonB dependent receptor 207 616 2.4E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_08820 de60db4f9263aea7871a79740f865847 617 Gene3D G3DSA:2.40.170.20 158 617 2.2E-107 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_08820 de60db4f9263aea7871a79740f865847 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 4.6E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_08820 de60db4f9263aea7871a79740f865847 617 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 600 617 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_08820 de60db4f9263aea7871a79740f865847 617 Gene3D G3DSA:2.170.130.10 19 153 9.5E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_08820 de60db4f9263aea7871a79740f865847 617 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 11-10-2018 IPR010916 TonB box, conserved site AL538_08820 de60db4f9263aea7871a79740f865847 617 SUPERFAMILY SSF56935 29 617 4.83E-104 T 11-10-2018 AL538_08820 de60db4f9263aea7871a79740f865847 617 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 617 34.009 T 11-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 AL538_03550 a5bb4c06b412472dd0ad1b3ec8559a00 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL538_03550 a5bb4c06b412472dd0ad1b3ec8559a00 157 SMART SM00347 41 145 1.9E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_03550 a5bb4c06b412472dd0ad1b3ec8559a00 157 Gene3D G3DSA:1.10.10.10 3 157 6.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03550 a5bb4c06b412472dd0ad1b3ec8559a00 157 Pfam PF12802 MarR family 46 109 1.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_03550 a5bb4c06b412472dd0ad1b3ec8559a00 157 SUPERFAMILY SSF46785 21 155 9.97E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_07020 d49ac82d10740d4995cecab30e132ff2 143 Gene3D G3DSA:2.60.40.3340 14 143 6.1E-42 T 11-10-2018 AL538_07020 d49ac82d10740d4995cecab30e132ff2 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 8.3E-50 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 Gene3D G3DSA:2.60.120.380 587 690 1.1E-13 T 11-10-2018 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 Gene3D G3DSA:2.60.120.380 698 811 1.4E-7 T 11-10-2018 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 Pfam PF08453 Peptidase family M9 N-terminal 31 210 1.4E-52 T 11-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 Gene3D G3DSA:1.10.1740.190 301 448 2.5E-32 T 11-10-2018 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 Pfam PF01752 Collagenase 274 556 2.2E-109 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 372 386 4.2E-30 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 432 450 4.2E-30 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 390 406 4.2E-30 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 456 471 4.2E-30 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_15610 57b6b3de219ecb9a8c20ac4134a3ea38 812 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 4.2E-30 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_17665 9ce23389c5a1b1d6d505194d46377fd9 392 Gene3D G3DSA:3.40.640.10 45 286 2.9E-115 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_17665 9ce23389c5a1b1d6d505194d46377fd9 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 389 1.6E-112 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AL538_17665 9ce23389c5a1b1d6d505194d46377fd9 392 SUPERFAMILY SSF53383 5 388 1.07E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_17665 9ce23389c5a1b1d6d505194d46377fd9 392 Pfam PF00155 Aminotransferase class I and II 36 384 2.8E-42 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_17665 9ce23389c5a1b1d6d505194d46377fd9 392 Gene3D G3DSA:3.90.1150.10 35 381 2.9E-115 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_09235 1b1c6cbbc448b4178383d99877e80e0d 224 Pfam PF02592 Putative vitamin uptake transporter 43 199 6.7E-38 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL538_09235 1b1c6cbbc448b4178383d99877e80e0d 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 2.1E-62 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL538_09235 1b1c6cbbc448b4178383d99877e80e0d 224 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.539 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 671 39.638 T 11-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Pfam PF13718 GNAT acetyltransferase 2 378 490 6.4E-18 T 11-10-2018 IPR000182 GNAT domain AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Gene3D G3DSA:3.40.630.30 337 540 4.0E-65 T 11-10-2018 AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 SUPERFAMILY SSF52540 153 287 2.01E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 SUPERFAMILY SSF55729 382 539 5.75E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Gene3D G3DSA:3.40.50.11040 3 139 5.3E-18 T 11-10-2018 AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Pfam PF05127 Helicase 176 343 3.1E-59 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 AL538_19430 3e1a2fc32cefa50569755dd63bc839f1 673 Gene3D G3DSA:3.40.50.12320 174 333 1.9E-47 T 11-10-2018 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 Pfam PF00145 C-5 cytosine-specific DNA methylase 71 426 4.3E-64 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 71 423 4.5E-58 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 140 152 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 406 424 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 SUPERFAMILY SSF53335 68 425 7.36E-84 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 246 259 1.3E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 179 193 1.3E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 70 86 1.3E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 Gene3D G3DSA:3.40.50.150 72 422 4.6E-74 T 11-10-2018 AL538_08900 72bb8d0cb13483256830d1518b8bb2a9 458 Gene3D G3DSA:3.90.120.10 241 415 4.6E-74 T 11-10-2018 AL538_21865 cbce466f47b508418d62063cb4061883 101 Pfam PF07978 NIPSNAP 5 99 4.1E-25 T 11-10-2018 IPR012577 NIPSNAP AL538_21865 cbce466f47b508418d62063cb4061883 101 Gene3D G3DSA:3.30.70.100 2 101 1.9E-5 T 11-10-2018 AL538_21865 cbce466f47b508418d62063cb4061883 101 SUPERFAMILY SSF54909 1 99 2.05E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_09215 876871f9e1a9819daa802107c22cddea 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 11-10-2018 AL538_09215 876871f9e1a9819daa802107c22cddea 419 SUPERFAMILY SSF52540 90 371 1.52E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09215 876871f9e1a9819daa802107c22cddea 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AL538_09215 876871f9e1a9819daa802107c22cddea 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.291 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL538_09215 876871f9e1a9819daa802107c22cddea 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_09215 876871f9e1a9819daa802107c22cddea 419 SMART SM00382 170 355 1.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_09215 876871f9e1a9819daa802107c22cddea 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AL538_09215 876871f9e1a9819daa802107c22cddea 419 Gene3D G3DSA:3.40.50.300 130 417 3.0E-134 T 11-10-2018 AL538_09215 876871f9e1a9819daa802107c22cddea 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.4E-219 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AL538_09215 876871f9e1a9819daa802107c22cddea 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.7E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09215 876871f9e1a9819daa802107c22cddea 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 11-10-2018 AL538_09215 876871f9e1a9819daa802107c22cddea 419 SMART SM00959 5 47 6.9E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL538_09215 876871f9e1a9819daa802107c22cddea 419 SMART SM00357 52 118 1.7E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_09215 876871f9e1a9819daa802107c22cddea 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AL538_23225 9735bb10d9f26b08945e54d8bf1b74d7 548 SMART SM00990 426 536 4.5E-22 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL538_23225 9735bb10d9f26b08945e54d8bf1b74d7 548 Pfam PF08774 VRR-NUC domain 431 535 9.2E-23 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AL538_23225 9735bb10d9f26b08945e54d8bf1b74d7 548 Gene3D G3DSA:3.40.1350.10 475 541 2.0E-10 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 Gene3D G3DSA:2.120.10.30 36 222 2.0E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 Gene3D G3DSA:3.40.50.1820 280 638 1.3E-81 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 Pfam PF00326 Prolyl oligopeptidase family 422 635 1.3E-47 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 SUPERFAMILY SSF53474 377 635 8.11E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 433 457 3.7E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 491 511 3.7E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 567 3.7E-5 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_18730 b9537630fa19ac8a6f58380f1ca3a189 640 SUPERFAMILY SSF82171 42 378 1.55E-21 T 11-10-2018 AL538_23955 bcbdee7b7abf6f1964381bce1b3196c0 272 Gene3D G3DSA:3.20.20.450 21 271 7.9E-49 T 11-10-2018 IPR035919 EAL domain superfamily AL538_23955 bcbdee7b7abf6f1964381bce1b3196c0 272 SUPERFAMILY SSF141868 24 266 2.62E-51 T 11-10-2018 IPR035919 EAL domain superfamily AL538_23955 bcbdee7b7abf6f1964381bce1b3196c0 272 Pfam PF00563 EAL domain 26 255 1.8E-45 T 11-10-2018 IPR001633 EAL domain AL538_23955 bcbdee7b7abf6f1964381bce1b3196c0 272 SMART SM00052 13 260 1.0E-14 T 11-10-2018 IPR001633 EAL domain AL538_06220 f9d199579a029ed1ce6f52739445de4d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 29.003 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AL538_06220 f9d199579a029ed1ce6f52739445de4d 209 PIRSF PIRSF005461 1 209 3.9E-80 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AL538_06220 f9d199579a029ed1ce6f52739445de4d 209 SUPERFAMILY SSF53335 30 209 2.57E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_06220 f9d199579a029ed1ce6f52739445de4d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 3.8E-58 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AL538_06220 f9d199579a029ed1ce6f52739445de4d 209 Gene3D G3DSA:3.40.50.150 30 209 3.5E-61 T 11-10-2018 AL538_07460 5cafed28640b045062cbd04fd73e18f9 162 PIRSF PIRSF018472 1 162 2.1E-41 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL538_07460 5cafed28640b045062cbd04fd73e18f9 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.3E-36 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL538_07460 5cafed28640b045062cbd04fd73e18f9 162 Pfam PF04093 rod shape-determining protein MreD 6 154 5.0E-40 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AL538_25760 65f35eacd16203e20bc678713dc29406 232 SUPERFAMILY SSF53681 118 229 9.16E-35 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_25760 65f35eacd16203e20bc678713dc29406 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 5.2E-76 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AL538_25760 65f35eacd16203e20bc678713dc29406 232 Gene3D G3DSA:3.40.50.1860 104 215 4.9E-87 T 11-10-2018 AL538_25760 65f35eacd16203e20bc678713dc29406 232 SUPERFAMILY SSF53681 1 114 6.87E-37 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_25760 65f35eacd16203e20bc678713dc29406 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.8E-62 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_25760 65f35eacd16203e20bc678713dc29406 232 Gene3D G3DSA:3.40.50.1860 4 224 4.9E-87 T 11-10-2018 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 SUPERFAMILY SSF51230 80 155 1.07E-26 T 11-10-2018 IPR011053 Single hybrid motif AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 1.5E-64 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.0E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.0E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.0E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 Gene3D G3DSA:2.40.50.100 77 155 4.0E-32 T 11-10-2018 AL538_08475 ed27a64b348e2b6b90de77346cadb21a 155 Pfam PF00364 Biotin-requiring enzyme 80 154 8.2E-26 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 Gene3D G3DSA:3.30.2350.20 18 337 7.3E-107 T 11-10-2018 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.693 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 SUPERFAMILY SSF55120 6 338 1.73E-97 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 264 4.4E-56 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 186 337 2.6E-23 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 2.5E-42 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AL538_06725 5dbe86145474e424dcab0bbe117eaaa3 347 Gene3D G3DSA:3.30.2340.10 170 302 7.3E-107 T 11-10-2018 AL538_04075 ab037e08f83e74ea8746f33828f02a8f 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.6E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_04075 ab037e08f83e74ea8746f33828f02a8f 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 68 1.1E-15 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL538_04075 ab037e08f83e74ea8746f33828f02a8f 300 Gene3D G3DSA:1.10.3720.10 96 296 1.2E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04075 ab037e08f83e74ea8746f33828f02a8f 300 SUPERFAMILY SSF161098 97 281 4.06E-27 T 11-10-2018 IPR035906 MetI-like superfamily AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.6E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.6E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.6E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.6E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.6E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.16 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_21060 6eb8b965a05e5dda36d3a14325e8358f 223 Pfam PF02107 Flagellar L-ring protein 46 220 3.8E-60 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 3.5E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 Gene3D G3DSA:1.10.10.10 4 55 7.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 SUPERFAMILY SSF46785 1 92 2.99E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 8.3E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 8.3E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 8.3E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.3E-18 T 11-10-2018 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 SUPERFAMILY SSF54909 63 152 4.02E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 Gene3D G3DSA:3.30.70.920 56 140 1.4E-21 T 11-10-2018 AL538_14430 8fd818da4cc083aad6d71b3d7416a1ce 155 SMART SM00344 3 112 5.9E-43 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 Gene3D G3DSA:3.40.50.720 146 250 2.2E-13 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 4.0E-250 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 Gene3D G3DSA:3.50.50.60 251 398 1.1E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 8.1E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.0E-38 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 SUPERFAMILY SSF51971 145 399 1.18E-68 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 9.2E-37 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 9.2E-37 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 9.2E-37 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 9.2E-37 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 9.2E-37 T 11-10-2018 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 SUPERFAMILY SSF46548 6 157 2.25E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_11745 6647ac90a3ab9216c15244a4863c7ea0 470 Gene3D G3DSA:1.10.1060.10 11 145 3.2E-35 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 133 8.0E-69 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.378 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 Gene3D G3DSA:1.20.1270.380 1 89 1.9E-48 T 11-10-2018 IPR038339 MatP, N-terminal domain superfamily AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 Gene3D G3DSA:1.10.1220.10 98 149 3.1E-23 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 Pfam PF06303 MatP N-terminal domain 2 85 2.4E-42 T 11-10-2018 IPR035087 MatP, N-terminal AL538_00820 af44279aa8b814ad113c76f91bb7941f 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.0E-26 T 11-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain AL538_26255 1d1c14a80328a39c4003761e6761ed62 322 Pfam PF13609 Gram-negative porin 8 297 1.3E-26 T 11-10-2018 AL538_26255 1d1c14a80328a39c4003761e6761ed62 322 SUPERFAMILY SSF56935 22 322 4.27E-48 T 11-10-2018 AL538_26255 1d1c14a80328a39c4003761e6761ed62 322 Gene3D G3DSA:2.40.160.10 22 322 2.3E-56 T 11-10-2018 IPR023614 Porin domain superfamily AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 SMART SM00116 276 324 0.57 T 11-10-2018 IPR000644 CBS domain AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 SMART SM00116 213 260 0.0029 T 11-10-2018 IPR000644 CBS domain AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 PIRSF PIRSF004692 1 325 4.4E-108 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 315 9.4E-93 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 SUPERFAMILY SSF53697 4 262 2.67E-52 T 11-10-2018 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 Gene3D G3DSA:3.40.50.10490 7 198 9.8E-58 T 11-10-2018 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 Pfam PF01380 SIS domain 44 172 9.4E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 Pfam PF00571 CBS domain 277 319 1.7E-4 T 11-10-2018 IPR000644 CBS domain AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 Pfam PF00571 CBS domain 211 260 1.6E-4 T 11-10-2018 IPR000644 CBS domain AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 SUPERFAMILY SSF54631 266 321 5.65E-7 T 11-10-2018 AL538_14975 8f068ea4ac6a8981a228c1849349b089 325 Gene3D G3DSA:3.10.580.10 199 322 3.2E-28 T 11-10-2018 AL538_14935 74990c846d6be1ce497865248de294f0 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 7.1E-40 T 11-10-2018 IPR011846 Cyd operon protein YbgE AL538_14935 74990c846d6be1ce497865248de294f0 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 1.1E-29 T 11-10-2018 IPR011846 Cyd operon protein YbgE AL538_01425 034d32c6690c343a2c7dd0a90a6a5474 634 SUPERFAMILY SSF54001 268 397 6.13E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL538_01425 034d32c6690c343a2c7dd0a90a6a5474 634 Pfam PF01841 Transglutaminase-like superfamily 274 351 9.2E-5 T 11-10-2018 IPR002931 Transglutaminase-like AL538_01425 034d32c6690c343a2c7dd0a90a6a5474 634 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 86 209 1.3E-10 T 11-10-2018 IPR024618 Domain of unknown function DUF3857 AL538_01425 034d32c6690c343a2c7dd0a90a6a5474 634 Gene3D G3DSA:2.60.40.3140 58 218 5.8E-7 T 11-10-2018 AL538_01425 034d32c6690c343a2c7dd0a90a6a5474 634 Gene3D G3DSA:3.10.620.30 254 402 1.9E-33 T 11-10-2018 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 PIRSF PIRSF000103 2 292 3.2E-69 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 280 1.5E-18 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 Gene3D G3DSA:3.40.50.720 1 164 1.1E-44 T 11-10-2018 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 3.0E-40 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 SUPERFAMILY SSF48179 166 291 1.43E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 Gene3D G3DSA:1.10.1040.10 165 292 8.9E-26 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_15570 d9b0b8ea8bbeb6e641f43753222843a9 292 SUPERFAMILY SSF51735 6 164 8.3E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SUPERFAMILY SSF52172 596 724 3.84E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 577 3.5E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SMART SM00387 464 579 1.4E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SMART SM00448 598 712 1.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Gene3D G3DSA:3.40.50.2300 586 717 1.8E-31 T 11-10-2018 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Gene3D G3DSA:3.30.565.10 416 580 6.3E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SMART SM00388 352 417 9.4E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 4.3E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 4.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Gene3D G3DSA:3.30.450.20 30 204 9.2E-20 T 11-10-2018 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Gene3D G3DSA:1.10.287.130 319 415 1.9E-25 T 11-10-2018 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SUPERFAMILY SSF55874 406 576 2.88E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 Pfam PF00072 Response regulator receiver domain 601 712 7.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_15080 602efc29eed643e2e17caaf49f2f695e 806 SUPERFAMILY SSF47384 338 418 3.73E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_23630 69dd2f16d8991c4ca8664d2cba9f10b4 292 SUPERFAMILY SSF103481 41 143 4.32E-11 T 11-10-2018 AL538_23630 69dd2f16d8991c4ca8664d2cba9f10b4 292 SUPERFAMILY SSF103481 188 285 4.32E-14 T 11-10-2018 AL538_23630 69dd2f16d8991c4ca8664d2cba9f10b4 292 Pfam PF00892 EamA-like transporter family 8 137 4.7E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_23630 69dd2f16d8991c4ca8664d2cba9f10b4 292 Pfam PF00892 EamA-like transporter family 149 279 5.4E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 6.0E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 6.0E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 6.0E-27 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 Pfam PF00717 Peptidase S24-like 86 162 1.6E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 Pfam PF10502 Signal peptidase, peptidase S26 212 269 8.1E-8 T 11-10-2018 IPR019533 Peptidase S26 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 Gene3D G3DSA:2.170.230.10 155 231 3.8E-75 T 11-10-2018 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 Gene3D G3DSA:2.10.109.10 78 272 3.8E-75 T 11-10-2018 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 SUPERFAMILY SSF51306 78 298 6.1E-71 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AL538_06800 4b8f542bad83b537a714ca55d9f191e8 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.4E-48 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 89 114 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 59 79 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 241 260 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 9.7E-44 T 11-10-2018 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 SUPERFAMILY SSF118215 33 416 6.41E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 Pfam PF00375 Sodium:dicarboxylate symporter family 40 416 2.1E-87 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_27345 2d7e0e13c59e65cdfa7a79e22f379dcf 434 Gene3D G3DSA:1.10.3860.10 7 431 1.2E-93 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 Gene3D G3DSA:3.40.630.10 181 497 2.4E-140 T 11-10-2018 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 SUPERFAMILY SSF52949 1 184 4.71E-52 T 11-10-2018 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.5E-123 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 Gene3D G3DSA:3.40.220.10 1 159 1.5E-59 T 11-10-2018 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.76 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.6E-34 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AL538_07245 71bc577f5ed153571374e29c8e4c2d50 502 SUPERFAMILY SSF53187 179 496 4.39E-124 T 11-10-2018 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 Gene3D G3DSA:3.20.20.140 55 341 1.7E-142 T 11-10-2018 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 PIRSF PIRSF038994 1 378 1.9E-121 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 Gene3D G3DSA:2.30.40.10 6 373 1.7E-142 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 SUPERFAMILY SSF51338 1 53 7.71E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 2.6E-155 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 SUPERFAMILY SSF51556 54 347 4.89E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_13665 f05a7c43f043b8b4c557af8c1a8a42c8 378 Pfam PF01979 Amidohydrolase family 51 374 4.1E-37 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 6.1E-60 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 104 197 1.97E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 213 510 1.2E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF13192 Thioredoxin domain 120 194 5.7E-12 T 11-10-2018 IPR012336 Thioredoxin-like fold AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF51905 203 516 9.26E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 SUPERFAMILY SSF52833 1 101 1.34E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.50.50.60 328 451 1.2E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 3.2E-41 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 6.0E-35 T 11-10-2018 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.0E-35 T 11-10-2018 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 6.0E-35 T 11-10-2018 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 6.0E-35 T 11-10-2018 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 6.0E-35 T 11-10-2018 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 PIRSF PIRSF000238 1 522 2.6E-254 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 1.5E-247 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AL538_19980 07d2c0c8e98f1653589a88f3aae2aa57 522 Gene3D G3DSA:3.40.30.80 1 200 3.8E-65 T 11-10-2018 AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 SUPERFAMILY SSF161098 400 565 1.01E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 322 1.9E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 420 586 7.5E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 Gene3D G3DSA:1.10.3720.10 396 587 2.1E-11 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 Gene3D G3DSA:1.10.3720.10 104 322 2.1E-9 T 11-10-2018 IPR035906 MetI-like superfamily AL538_15400 1a229c768dd7dde8c7557f82a6de81fd 587 SUPERFAMILY SSF161098 117 310 5.36E-6 T 11-10-2018 IPR035906 MetI-like superfamily AL538_22490 3fa9095373b930757b9ac41b03887b84 218 Gene3D G3DSA:2.30.110.10 2 216 5.3E-62 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_22490 3fa9095373b930757b9ac41b03887b84 218 SUPERFAMILY SSF50475 2 184 8.05E-55 T 11-10-2018 AL538_22490 3fa9095373b930757b9ac41b03887b84 218 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 20 162 7.6E-40 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AL538_03895 8d3d50081d23e75535acf354920f95fe 245 SUPERFAMILY SSF51735 5 244 4.2E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_03895 8d3d50081d23e75535acf354920f95fe 245 Gene3D G3DSA:3.40.50.720 1 245 1.1E-88 T 11-10-2018 AL538_03895 8d3d50081d23e75535acf354920f95fe 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 6.2E-67 T 11-10-2018 AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 3.5E-100 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03895 8d3d50081d23e75535acf354920f95fe 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_03895 8d3d50081d23e75535acf354920f95fe 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 3.2E-5 T 11-10-2018 AL538_11040 8f4b1be09fce0ac091a5a68ce8082563 242 SMART SM00382 35 233 2.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_11040 8f4b1be09fce0ac091a5a68ce8082563 242 Pfam PF00005 ABC transporter 30 185 2.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_11040 8f4b1be09fce0ac091a5a68ce8082563 242 SUPERFAMILY SSF52540 5 229 6.29E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11040 8f4b1be09fce0ac091a5a68ce8082563 242 Gene3D G3DSA:3.40.50.300 6 235 3.1E-53 T 11-10-2018 AL538_09475 1720eee8fc61e6365d0df3c1a4125c40 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.8E-116 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_09475 1720eee8fc61e6365d0df3c1a4125c40 481 Pfam PF02386 Cation transport protein 51 475 6.3E-50 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL538_09475 1720eee8fc61e6365d0df3c1a4125c40 481 PIRSF PIRSF006247 1 481 5.9E-167 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_18055 69ae7307ba4690d3ac9a9c27235c0ecd 561 Gene3D G3DSA:2.20.200.10 106 381 4.7E-110 T 11-10-2018 AL538_18055 69ae7307ba4690d3ac9a9c27235c0ecd 561 Gene3D G3DSA:1.20.1600.10 59 493 4.7E-110 T 11-10-2018 AL538_18055 69ae7307ba4690d3ac9a9c27235c0ecd 561 Pfam PF02321 Outer membrane efflux protein 69 251 1.2E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_18055 69ae7307ba4690d3ac9a9c27235c0ecd 561 Pfam PF02321 Outer membrane efflux protein 311 490 7.1E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_18055 69ae7307ba4690d3ac9a9c27235c0ecd 561 SUPERFAMILY SSF56954 2 494 1.7E-94 T 11-10-2018 AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 PIRSF PIRSF006078 1 376 5.9E-138 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 Pfam PF02595 Glycerate kinase family 3 374 9.5E-149 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 SUPERFAMILY SSF110738 1 375 8.5E-140 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.3E-158 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 Gene3D G3DSA:3.40.50.10350 1 362 3.5E-140 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold AL538_18500 c48d68d9663c31e33cd45594fdae044d 377 Gene3D G3DSA:3.90.1510.10 42 276 3.5E-140 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 Gene3D G3DSA:1.10.10.60 228 283 3.2E-19 T 11-10-2018 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 SUPERFAMILY SSF51182 47 101 4.57E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 Pfam PF12833 Helix-turn-helix domain 201 279 4.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 8.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 8.4E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 SMART SM00342 195 278 2.1E-35 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 SUPERFAMILY SSF46689 231 282 8.96E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 Gene3D G3DSA:1.10.10.60 176 227 1.3E-17 T 11-10-2018 AL538_15030 ff4cfaf54c476ce4c47848eb70cff6a6 289 SUPERFAMILY SSF46689 178 228 1.61E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SMART SM00387 320 428 2.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 6.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 6.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 6.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SMART SM00388 211 276 2.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 Gene3D G3DSA:3.30.565.10 282 428 1.1E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SUPERFAMILY SSF47384 194 276 4.12E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SUPERFAMILY SSF158472 159 208 9.29E-5 T 11-10-2018 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SMART SM00304 158 210 3.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.5E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 427 5.8E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 SUPERFAMILY SSF55874 266 426 5.89E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22325 5427081a80463fe4ba14d28a7fff1bd4 428 Gene3D G3DSA:1.10.287.130 162 277 2.6E-23 T 11-10-2018 AL538_22790 420560a72b323d49499d93c19b63afdb 181 Pfam PF07152 YaeQ protein 1 171 1.2E-64 T 11-10-2018 IPR009822 YaeQ AL538_22790 420560a72b323d49499d93c19b63afdb 181 SMART SM01322 1 174 5.5E-95 T 11-10-2018 IPR009822 YaeQ AL538_22790 420560a72b323d49499d93c19b63afdb 181 PIRSF PIRSF011484 1 179 1.0E-62 T 11-10-2018 IPR009822 YaeQ AL538_22790 420560a72b323d49499d93c19b63afdb 181 SUPERFAMILY SSF52980 2 178 2.44E-62 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_22790 420560a72b323d49499d93c19b63afdb 181 Gene3D G3DSA:3.10.640.10 1 179 2.2E-65 T 11-10-2018 IPR038590 YaeQ superfamily AL538_20895 4d87f7c88ce84564a35d41118e117241 367 Gene3D G3DSA:3.90.1150.10 8 353 5.2E-123 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20895 4d87f7c88ce84564a35d41118e117241 367 SUPERFAMILY SSF53383 3 362 5.75E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_20895 4d87f7c88ce84564a35d41118e117241 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 5.2E-202 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL538_20895 4d87f7c88ce84564a35d41118e117241 367 Pfam PF00266 Aminotransferase class-V 36 313 1.2E-30 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_20895 4d87f7c88ce84564a35d41118e117241 367 Gene3D G3DSA:3.40.640.10 16 262 5.2E-123 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_20895 4d87f7c88ce84564a35d41118e117241 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 214.396 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL538_20895 4d87f7c88ce84564a35d41118e117241 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 6.4E-171 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AL538_20895 4d87f7c88ce84564a35d41118e117241 367 PIRSF PIRSF000524 1 365 6.3E-58 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AL538_19790 16eef45427e25617837d49a936c24ff4 327 Gene3D G3DSA:3.40.190.170 29 327 2.4E-108 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL538_19790 16eef45427e25617837d49a936c24ff4 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 1.5E-88 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL538_19790 16eef45427e25617837d49a936c24ff4 327 PIRSF PIRSF006470 1 326 5.1E-95 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL538_19790 16eef45427e25617837d49a936c24ff4 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 4.0E-81 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL538_19790 16eef45427e25617837d49a936c24ff4 327 SUPERFAMILY SSF53850 137 276 1.02E-9 T 11-10-2018 AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 SUPERFAMILY SSF55073 243 412 2.51E-34 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 347 6.3E-23 T 11-10-2018 IPR000160 GGDEF domain AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 407 4.4E-6 T 11-10-2018 IPR000160 GGDEF domain AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 344 2.2E-24 T 11-10-2018 IPR000160 GGDEF domain AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 Gene3D G3DSA:3.30.70.270 230 413 1.3E-45 T 11-10-2018 AL538_24355 969f9681cd6aa94ed424d2eaa14db6cb 414 SMART SM00267 227 412 5.4E-38 T 11-10-2018 IPR000160 GGDEF domain AL538_04430 4072e2bad1b9ebe312599fe0101999c6 502 Pfam PF00905 Penicillin binding protein transpeptidase domain 252 455 1.8E-14 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_04430 4072e2bad1b9ebe312599fe0101999c6 502 Gene3D G3DSA:3.40.710.10 189 501 1.0E-47 T 11-10-2018 AL538_04430 4072e2bad1b9ebe312599fe0101999c6 502 SUPERFAMILY SSF56601 204 499 1.52E-49 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 Gene3D G3DSA:1.10.10.10 2 91 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 Gene3D G3DSA:3.40.190.10 92 287 6.5E-36 T 11-10-2018 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 SUPERFAMILY SSF53850 92 294 1.07E-29 T 11-10-2018 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 SUPERFAMILY SSF46785 2 86 1.01E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 Pfam PF03466 LysR substrate binding domain 91 295 1.9E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 Gene3D G3DSA:3.40.190.10 165 270 6.5E-36 T 11-10-2018 AL538_04360 3f59b57ee4d42cdcbc97be2212944a67 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23275 c34d21bd562117ac9a6a558a86a6793c 393 Gene3D G3DSA:3.40.640.10 59 290 7.4E-142 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_23275 c34d21bd562117ac9a6a558a86a6793c 393 Pfam PF00155 Aminotransferase class I and II 47 379 6.4E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_23275 c34d21bd562117ac9a6a558a86a6793c 393 Gene3D G3DSA:3.90.1150.10 20 382 7.4E-142 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_23275 c34d21bd562117ac9a6a558a86a6793c 393 SUPERFAMILY SSF53383 42 386 5.92E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_24820 c72999f666dec155536babb32a409e5a 379 Gene3D G3DSA:3.60.21.10 1 266 1.4E-81 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_24820 c72999f666dec155536babb32a409e5a 379 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 2.1E-57 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AL538_24820 c72999f666dec155536babb32a409e5a 379 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 3.6E-10 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AL538_24820 c72999f666dec155536babb32a409e5a 379 SUPERFAMILY SSF56300 1 320 3.21E-62 T 11-10-2018 AL538_24820 c72999f666dec155536babb32a409e5a 379 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.2E-17 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_19705 cca0cbd2ae8c497a04a6669c44feb4fc 492 ProSitePatterns PS00523 Sulfatases signature 1. 40 52 - T 11-10-2018 IPR024607 Sulfatase, conserved site AL538_19705 cca0cbd2ae8c497a04a6669c44feb4fc 492 SUPERFAMILY SSF53649 14 432 4.52E-63 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_19705 cca0cbd2ae8c497a04a6669c44feb4fc 492 Gene3D G3DSA:3.40.720.10 3 461 6.5E-69 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_19705 cca0cbd2ae8c497a04a6669c44feb4fc 492 Pfam PF00884 Sulfatase 17 363 1.5E-37 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 3.8E-18 T 11-10-2018 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 SMART SM00344 11 120 1.2E-34 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 Gene3D G3DSA:3.30.70.920 63 155 1.6E-18 T 11-10-2018 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 SUPERFAMILY SSF46785 10 71 5.27E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.5E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.5E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.5E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 Gene3D G3DSA:1.10.10.10 1 62 5.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 Pfam PF01037 Lrp/AsnC ligand binding domain 79 149 1.3E-11 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_19880 f62dd2d8002569d90d8a8eb755481f7f 160 SUPERFAMILY SSF54909 71 159 1.47E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_23420 1096e38a4993e45d4d1fed69ef023e7b 268 Pfam PF09850 Type VI secretion system protein DotU 52 251 2.4E-50 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_23420 1096e38a4993e45d4d1fed69ef023e7b 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 258 1.3E-61 T 11-10-2018 IPR017732 Type IV / VI secretion system, DotU AL538_23420 1096e38a4993e45d4d1fed69ef023e7b 268 Gene3D G3DSA:1.25.40.590 49 206 2.0E-47 T 11-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily AL538_22355 361a9df4aa1535d1e80c96740a36edda 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 24 2.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_22355 361a9df4aa1535d1e80c96740a36edda 151 Gene3D G3DSA:3.30.700.10 7 150 8.9E-6 T 11-10-2018 AL538_22355 361a9df4aa1535d1e80c96740a36edda 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_22355 361a9df4aa1535d1e80c96740a36edda 151 SUPERFAMILY SSF54523 7 76 1.26E-7 T 11-10-2018 AL538_22355 361a9df4aa1535d1e80c96740a36edda 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 6.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_15715 6f486dc872c4c619477dc94a04e2329f 289 Pfam PF01435 Peptidase family M48 78 286 3.7E-40 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL538_15715 6f486dc872c4c619477dc94a04e2329f 289 Gene3D G3DSA:3.30.2010.10 68 161 1.3E-37 T 11-10-2018 AL538_15715 6f486dc872c4c619477dc94a04e2329f 289 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.981 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 2.6E-135 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 SUPERFAMILY SSF53686 3 313 3.14E-96 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 Gene3D G3DSA:3.40.50.1100 43 145 1.5E-125 T 11-10-2018 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.5E-142 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 Gene3D G3DSA:3.40.50.1100 12 306 1.5E-125 T 11-10-2018 AL538_13520 a8fa7b5a8a1ca793059af624967461c0 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.3E-68 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_11810 87f26228b03970823b2adac181ea833a 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.0E-26 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AL538_11810 87f26228b03970823b2adac181ea833a 819 Pfam PF00696 Amino acid kinase family 2 284 2.5E-52 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_11810 87f26228b03970823b2adac181ea833a 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_11810 87f26228b03970823b2adac181ea833a 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL538_11810 87f26228b03970823b2adac181ea833a 819 Gene3D G3DSA:3.30.360.10 625 795 9.5E-120 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 SUPERFAMILY SSF55347 614 797 7.19E-51 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 SUPERFAMILY SSF55021 303 381 2.0E-22 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 SUPERFAMILY SSF51735 463 636 9.45E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_11810 87f26228b03970823b2adac181ea833a 819 Pfam PF13840 ACT domain 393 456 1.9E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain AL538_11810 87f26228b03970823b2adac181ea833a 819 Gene3D G3DSA:3.40.1160.10 3 295 2.0E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_11810 87f26228b03970823b2adac181ea833a 819 Pfam PF01842 ACT domain 324 379 7.8E-10 T 11-10-2018 IPR002912 ACT domain AL538_11810 87f26228b03970823b2adac181ea833a 819 Gene3D G3DSA:3.40.50.720 467 811 9.5E-120 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 PIRSF PIRSF000727 1 817 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_11810 87f26228b03970823b2adac181ea833a 819 Gene3D G3DSA:3.30.2130.10 302 464 3.4E-46 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 SUPERFAMILY SSF53633 1 298 3.93E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_11810 87f26228b03970823b2adac181ea833a 819 Pfam PF00742 Homoserine dehydrogenase 614 810 3.4E-47 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AL538_11810 87f26228b03970823b2adac181ea833a 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 6.8E-133 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_11810 87f26228b03970823b2adac181ea833a 819 Gene3D G3DSA:1.20.120.1320 41 142 2.0E-87 T 11-10-2018 AL538_11810 87f26228b03970823b2adac181ea833a 819 SUPERFAMILY SSF55021 383 476 5.15E-22 T 11-10-2018 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 Pfam PF00809 Pterin binding enzyme 18 257 4.4E-90 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 SUPERFAMILY SSF51717 4 274 1.02E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 6.0E-103 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_06210 c98018dfd3ef56d9e551c2da91a3694e 276 Gene3D G3DSA:3.20.20.20 1 275 8.4E-111 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 SMART SM00478 38 185 3.6E-54 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.8E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Gene3D G3DSA:1.10.340.30 21 132 6.2E-77 T 11-10-2018 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 PIRSF PIRSF001435 1 210 4.5E-49 T 11-10-2018 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.1E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 SMART SM00525 186 206 1.8E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Gene3D G3DSA:1.10.1670.10 11 203 6.2E-77 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.596 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.5E-87 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AL538_04175 c41d3260052ec6c00987f07a2cb890e9 213 SUPERFAMILY SSF48150 5 207 6.44E-70 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 SUPERFAMILY SSF53850 88 293 4.16E-26 T 11-10-2018 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 Gene3D G3DSA:3.40.190.10 100 289 3.2E-35 T 11-10-2018 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 Pfam PF03466 LysR substrate binding domain 87 293 2.4E-23 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 SUPERFAMILY SSF46785 2 82 9.46E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 Gene3D G3DSA:1.10.10.10 5 94 6.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17575 30c3af1770bb93526c5e3a23666f61a6 294 Gene3D G3DSA:3.40.190.10 159 262 3.2E-35 T 11-10-2018 AL538_16975 14656555b5703226033ca507762554c4 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 491 1.3E-175 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_16975 14656555b5703226033ca507762554c4 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 8.4E-166 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 ProSitePatterns PS01047 Heavy-metal-associated domain. 164 193 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF81665 350 850 2.62E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:3.40.50.1000 566 835 6.1E-92 T 11-10-2018 IPR023214 HAD superfamily AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:3.30.70.100 6 63 2.9E-7 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:2.70.150.20 371 487 5.5E-37 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF55008 159 228 1.09E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 316 892 8.5E-181 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 587 593 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF55008 65 127 1.44E-6 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 585 599 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 7.7E-28 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:3.40.1110.10 596 715 6.1E-92 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 301 320 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 174 188 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 856 870 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 506 520 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 568 583 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 373 391 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 PRINTS PR00943 Copper-transporting ATPase signature 760 777 5.6E-13 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF56784 583 889 1.07E-57 T 11-10-2018 IPR036412 HAD-like superfamily AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Pfam PF00122 E1-E2 ATPase 384 564 3.0E-49 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 1.4E-180 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 797 2.9E-45 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 ProSitePatterns PS01229 Hypothetical cof family signature 2. 783 805 - T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:3.30.70.100 64 134 4.2E-5 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Gene3D G3DSA:3.30.70.100 146 235 2.6E-19 T 11-10-2018 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF55008 1 62 9.56E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 SUPERFAMILY SSF81653 386 483 1.11E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Pfam PF00403 Heavy-metal-associated domain 164 223 1.8E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 Pfam PF00403 Heavy-metal-associated domain 6 60 5.9E-7 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL538_13350 c5348a0b8a37ad26244e86866dfdee7e 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 355 861 1.4E-90 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_24090 4a165c1c8aa495fdeb34c9f85b0e74de 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 3.7E-144 T 11-10-2018 IPR022602 Protein of unknown function DUF2813 AL538_24090 4a165c1c8aa495fdeb34c9f85b0e74de 544 Gene3D G3DSA:3.40.50.300 1 340 5.0E-15 T 11-10-2018 AL538_24090 4a165c1c8aa495fdeb34c9f85b0e74de 544 SUPERFAMILY SSF52540 1 326 1.73E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 SUPERFAMILY SSF64288 53 228 2.36E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 SMART SM00866 86 225 1.8E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 Gene3D G3DSA:3.40.1410.10 70 229 7.5E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 Pfam PF07702 UTRA domain 86 224 7.8E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 SMART SM00345 6 65 4.1E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.1E-116 T 11-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 SUPERFAMILY SSF46785 3 69 1.02E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_20915 97328eff77e5009c1cc6b852a1f61806 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_12255 b7df1dd4904236bb7fe56ea35ff5ea88 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 9.2E-118 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AL538_12255 b7df1dd4904236bb7fe56ea35ff5ea88 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 6.6E-116 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AL538_12255 b7df1dd4904236bb7fe56ea35ff5ea88 258 SUPERFAMILY SSF52540 35 223 3.32E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12255 b7df1dd4904236bb7fe56ea35ff5ea88 258 Gene3D G3DSA:3.40.50.300 1 242 8.5E-103 T 11-10-2018 AL538_12255 b7df1dd4904236bb7fe56ea35ff5ea88 258 PIRSF PIRSF028756 1 258 6.0E-135 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.4E-17 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 SMART SM01185 69 124 1.6E-13 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.5E-89 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Gene3D G3DSA:2.40.50.140 67 130 4.2E-15 T 11-10-2018 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.4E-13 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 SMART SM00841 132 187 3.1E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 PIRSF PIRSF005901 1 188 1.6E-58 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Gene3D G3DSA:2.40.50.140 131 188 2.0E-19 T 11-10-2018 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 SUPERFAMILY SSF50249 132 188 1.88E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Gene3D G3DSA:2.30.30.30 1 65 3.4E-15 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.081 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 SUPERFAMILY SSF50249 67 129 4.71E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 8.7E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL538_03335 332ca4234b5fb9649aa3b55898ef4237 188 SUPERFAMILY SSF50104 1 65 9.63E-12 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_10970 a29cb05137983e15b67ef3942c802a40 198 Gene3D G3DSA:3.10.450.350 102 192 2.0E-14 T 11-10-2018 AL538_10970 a29cb05137983e15b67ef3942c802a40 198 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 5.4E-8 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AL538_10970 a29cb05137983e15b67ef3942c802a40 198 Pfam PF04225 Opacity-associated protein A LysM-like domain 114 198 1.0E-38 T 11-10-2018 IPR007340 Opacity-associated protein A AL538_09575 5514a3255be7004f168d4a2d5743a822 246 Gene3D G3DSA:1.10.3720.10 33 242 1.5E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09575 5514a3255be7004f168d4a2d5743a822 246 SUPERFAMILY SSF161098 41 227 2.09E-47 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09575 5514a3255be7004f168d4a2d5743a822 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 1.4E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_09575 5514a3255be7004f168d4a2d5743a822 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 1.1E-29 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 1.2E-56 T 11-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 SMART SM00388 248 310 6.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 SMART SM00304 194 247 8.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Pfam PF00672 HAMP domain 195 242 1.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Gene3D G3DSA:1.10.287.130 198 311 1.4E-33 T 11-10-2018 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 5.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Gene3D G3DSA:3.30.565.10 313 463 2.3E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 SMART SM00387 354 464 1.3E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 SUPERFAMILY SSF55874 300 463 1.05E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 4.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 SUPERFAMILY SSF47384 234 309 3.14E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 308 8.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_08375 0a7d71c342b6487ce51e379fb7e45d38 467 Gene3D G3DSA:3.30.450.210 36 161 1.4E-54 T 11-10-2018 IPR038515 CpxA, periplasmic domain superfamily AL538_07335 89e2912c510950f277f1e1da45a6639b 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 261 3.7E-96 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AL538_07335 89e2912c510950f277f1e1da45a6639b 263 Pfam PF02405 Permease MlaE 48 259 7.2E-74 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Gene3D G3DSA:1.10.287.950 373 705 2.8E-68 T 11-10-2018 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Pfam PF00672 HAMP domain 375 424 7.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 SMART SM00304 374 428 9.9E-17 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 SMART SM00283 443 704 9.6E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Pfam PF02743 Cache domain 48 324 2.4E-14 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Gene3D G3DSA:3.30.450.20 96 233 1.2E-21 T 11-10-2018 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 SUPERFAMILY SSF58104 396 705 3.53E-72 T 11-10-2018 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Gene3D G3DSA:3.30.450.20 234 334 1.2E-21 T 11-10-2018 AL538_14700 4085ffb3c6cebc6feea5bb1739984aea 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 492 671 3.6E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AL538_14760 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 11-10-2018 AL538_08850 81141e55b4ceb8b70aa23a00b872c852 214 Pfam PF11726 Inovirus Gp2 35 210 1.5E-38 T 11-10-2018 AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 Pfam PF03180 NLPA lipoprotein 33 269 1.1E-98 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 Gene3D G3DSA:3.40.190.10 115 219 2.3E-94 T 11-10-2018 AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 SUPERFAMILY SSF53850 32 269 1.32E-78 T 11-10-2018 AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 PIRSF PIRSF002854 1 269 6.1E-99 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 Gene3D G3DSA:3.40.190.10 34 263 2.3E-94 T 11-10-2018 AL538_12985 39caf74eaade9395d4a5b70e361b6634 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 3.5E-126 T 11-10-2018 IPR004872 Lipoprotein NlpA family AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 Gene3D G3DSA:2.40.10.10 31 263 7.8E-52 T 11-10-2018 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 61 76 1.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 217 229 1.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 125 139 1.7E-12 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 SMART SM00020 28 269 1.1E-49 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 SUPERFAMILY SSF50494 19 273 6.63E-58 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 Gene3D G3DSA:2.40.10.10 41 269 7.8E-52 T 11-10-2018 AL538_21415 664b7b15a74df7227e81c589db3e1e41 342 Pfam PF00089 Trypsin 29 269 4.5E-41 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.186 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.2E-45 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 Gene3D G3DSA:1.20.120.220 92 268 2.6E-66 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 Pfam PF00119 ATP synthase A chain 44 262 1.3E-57 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09620 41c43d589af772a4a01ca4b35dfb1453 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_08300 605e677eb7e5305e552384109573b3f9 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 3.5E-153 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like AL538_08300 605e677eb7e5305e552384109573b3f9 340 Gene3D G3DSA:3.20.20.70 51 334 2.2E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_08300 605e677eb7e5305e552384109573b3f9 340 Pfam PF04055 Radical SAM superfamily 117 286 7.8E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_08300 605e677eb7e5305e552384109573b3f9 340 Pfam PF13353 4Fe-4S single cluster domain 115 183 4.6E-7 T 11-10-2018 AL538_08300 605e677eb7e5305e552384109573b3f9 340 SUPERFAMILY SSF102114 102 324 3.4E-25 T 11-10-2018 AL538_08300 605e677eb7e5305e552384109573b3f9 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 328 2.2E-127 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL538_08300 605e677eb7e5305e552384109573b3f9 340 PIRSF PIRSF004911 3 340 3.2E-115 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 Pfam PF08402 TOBE domain 281 353 2.9E-11 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 SMART SM00382 28 210 2.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 Gene3D G3DSA:2.40.50.100 239 361 1.2E-50 T 11-10-2018 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 Gene3D G3DSA:3.40.50.300 1 238 2.2E-75 T 11-10-2018 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 Pfam PF00005 ABC transporter 20 161 1.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 Gene3D G3DSA:2.40.50.140 287 344 1.2E-50 T 11-10-2018 AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 SUPERFAMILY SSF50331 236 364 4.13E-31 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_22125 7ece242b75d0d197890eb88aa5c8ddff 372 SUPERFAMILY SSF52540 4 244 2.08E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12535 47377218c00812e1f845a1c0357c4991 442 Pfam PF00202 Aminotransferase class-III 14 435 6.8E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_12535 47377218c00812e1f845a1c0357c4991 442 PIRSF PIRSF000521 1 438 1.4E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_12535 47377218c00812e1f845a1c0357c4991 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_12535 47377218c00812e1f845a1c0357c4991 442 Gene3D G3DSA:3.90.1150.10 15 435 1.3E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_12535 47377218c00812e1f845a1c0357c4991 442 SUPERFAMILY SSF53383 7 437 3.28E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_12535 47377218c00812e1f845a1c0357c4991 442 Gene3D G3DSA:3.40.640.10 48 326 1.3E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 11-10-2018 IPR036736 ACP-like superfamily AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 11-10-2018 IPR036736 ACP-like superfamily AL538_03890 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.6E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 Gene3D G3DSA:2.40.30.170 43 323 4.3E-32 T 11-10-2018 AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 Pfam PF13437 HlyD family secretion protein 208 312 5.5E-6 T 11-10-2018 AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 Gene3D G3DSA:1.10.287.470 78 207 4.3E-32 T 11-10-2018 AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 SUPERFAMILY SSF111369 44 125 2.35E-8 T 11-10-2018 AL538_01230 12e8da6f74949d67b627893fc4d3f450 326 Gene3D G3DSA:2.40.50.100 44 242 4.3E-32 T 11-10-2018 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 SMART SM00382 41 185 9.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 Gene3D G3DSA:1.10.10.60 264 316 8.0E-14 T 11-10-2018 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 278 295 1.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 295 315 1.0E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 Gene3D G3DSA:3.40.50.300 10 191 1.4E-59 T 11-10-2018 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 Pfam PF02954 Bacterial regulatory protein, Fis family 272 312 1.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 Gene3D G3DSA:1.10.8.60 192 255 2.5E-21 T 11-10-2018 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 231 240 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 SUPERFAMILY SSF52540 21 259 1.65E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 Pfam PF00158 Sigma-54 interaction domain 21 187 7.8E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_15795 814825686cad48b6ea7244afbfbc66b3 316 SUPERFAMILY SSF46689 231 314 4.61E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 Gene3D G3DSA:3.40.50.1000 360 630 6.5E-80 T 11-10-2018 IPR023214 HAD superfamily AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 381 387 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 SUPERFAMILY SSF81653 192 287 1.06E-21 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 164 660 5.7E-71 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 375 595 6.9E-36 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 137 682 9.2E-147 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 Gene3D G3DSA:2.70.150.20 181 290 1.5E-25 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 Gene3D G3DSA:3.40.1110.10 390 512 6.5E-80 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 SUPERFAMILY SSF56784 378 678 1.1E-50 T 11-10-2018 IPR036412 HAD-like superfamily AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 616 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 600 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 516 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 379 393 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 237 251 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 538 3.7E-27 T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 ProSitePatterns PS01229 Hypothetical cof family signature 2. 581 603 - T 11-10-2018 AL538_03735 c342776ad02c579ef350a74fc537b4f4 686 Pfam PF00122 E1-E2 ATPase 190 358 2.8E-34 T 11-10-2018 AL538_01805 743c66077acb33a690b67a83e181b816 333 Gene3D G3DSA:3.10.310.10 144 309 7.8E-115 T 11-10-2018 AL538_01805 743c66077acb33a690b67a83e181b816 333 Pfam PF05544 Proline racemase 8 330 4.5E-129 T 11-10-2018 IPR008794 Proline racemase family AL538_01805 743c66077acb33a690b67a83e181b816 333 PIRSF PIRSF029792 1 333 1.4E-138 T 11-10-2018 IPR008794 Proline racemase family AL538_01805 743c66077acb33a690b67a83e181b816 333 SUPERFAMILY SSF54506 3 330 7.18E-119 T 11-10-2018 AL538_01805 743c66077acb33a690b67a83e181b816 333 Gene3D G3DSA:3.10.310.10 7 331 7.8E-115 T 11-10-2018 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 237 1.8E-25 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 11-10-2018 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 4.1E-56 T 11-10-2018 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 Gene3D G3DSA:3.30.1240.10 84 193 2.9E-57 T 11-10-2018 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 Gene3D G3DSA:3.40.50.1000 5 264 2.9E-57 T 11-10-2018 IPR023214 HAD superfamily AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 1.5E-52 T 11-10-2018 IPR000150 Cof family GO:0016787 AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 SUPERFAMILY SSF56784 1 265 8.83E-61 T 11-10-2018 IPR036412 HAD-like superfamily AL538_17740 4e2461a0fc8b0ee48ca5dd2e20d0b410 281 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 11-10-2018 AL538_05420 ddc1dc55537d781d4e773f67c4e6c08e 150 SUPERFAMILY SSF54637 7 146 3.66E-49 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_05420 ddc1dc55537d781d4e773f67c4e6c08e 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.602 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_05420 ddc1dc55537d781d4e773f67c4e6c08e 150 Pfam PF07977 FabA-like domain 17 141 6.3E-40 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_05420 ddc1dc55537d781d4e773f67c4e6c08e 150 Gene3D G3DSA:3.10.129.10 2 150 2.5E-61 T 11-10-2018 AL538_05420 ddc1dc55537d781d4e773f67c4e6c08e 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 1.1E-59 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_21020 2f376be3686aaecbc4ecc218fd75c5c6 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 6.2E-16 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL538_21020 2f376be3686aaecbc4ecc218fd75c5c6 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 84 6.7E-7 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL538_21020 2f376be3686aaecbc4ecc218fd75c5c6 93 SUPERFAMILY SSF101498 24 89 1.31E-8 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 9.7E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 9.7E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 9.7E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 9.7E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 9.7E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 9.3E-62 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 SUPERFAMILY SSF63411 4 162 1.92E-66 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.585 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 PIRSF PIRSF006160 1 162 3.8E-67 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 4.0E-79 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_06575 3166e3d5f29bc2fc48e67fb924ea0229 172 Gene3D G3DSA:3.30.1360.80 1 172 1.1E-73 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 85 8.4E-32 T 11-10-2018 IPR035895 HPr-like superfamily AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 11-10-2018 IPR035895 HPr-like superfamily AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.7E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_13515 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23650 20367bb00f28a63b9418008bc99fab65 534 SUPERFAMILY SSF52096 237 516 1.85E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_23650 20367bb00f28a63b9418008bc99fab65 534 Gene3D G3DSA:3.90.226.10 272 534 2.9E-101 T 11-10-2018 AL538_23650 20367bb00f28a63b9418008bc99fab65 534 SUPERFAMILY SSF52096 23 269 8.35E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_23650 20367bb00f28a63b9418008bc99fab65 534 Gene3D G3DSA:3.90.226.10 1 269 1.5E-93 T 11-10-2018 AL538_23650 20367bb00f28a63b9418008bc99fab65 534 Pfam PF01039 Carboxyl transferase domain 48 524 3.4E-149 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AL538_14635 06c212ba072a1b117937957b704619f2 644 PIRSF PIRSF000549 1 644 2.3E-289 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AL538_14635 06c212ba072a1b117937957b704619f2 644 SMART SM00763 19 380 2.2E-221 T 11-10-2018 IPR013153 PrkA AAA domain AL538_14635 06c212ba072a1b117937957b704619f2 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.0E-72 T 11-10-2018 IPR010650 PrkA C-terminal domain AL538_14635 06c212ba072a1b117937957b704619f2 644 Pfam PF08298 PrkA AAA domain 19 380 2.3E-176 T 11-10-2018 IPR013153 PrkA AAA domain AL538_14635 06c212ba072a1b117937957b704619f2 644 SUPERFAMILY SSF52540 73 368 2.44E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03995 625d9585fa553e95e3a0a8ec878ec0f2 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.603 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB AL538_03995 625d9585fa553e95e3a0a8ec878ec0f2 178 SUPERFAMILY SSF158442 17 163 1.7E-44 T 11-10-2018 IPR023380 DsbB-like superfamily AL538_03995 625d9585fa553e95e3a0a8ec878ec0f2 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 1.3E-43 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AL538_03995 625d9585fa553e95e3a0a8ec878ec0f2 178 Gene3D G3DSA:1.20.1550.10 3 177 7.4E-60 T 11-10-2018 IPR023380 DsbB-like superfamily AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 SUPERFAMILY SSF51412 6 336 6.41E-99 T 11-10-2018 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 Gene3D G3DSA:3.20.20.70 1 345 9.4E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 50.103 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 PIRSF PIRSF000235 1 347 2.1E-195 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 2.9E-79 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 SMART SM01240 7 344 1.4E-136 T 11-10-2018 AL538_26045 7d75a73dea9ddd1260322aaac414b92a 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.7E-185 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Gene3D G3DSA:3.40.50.300 507 681 1.4E-29 T 11-10-2018 AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 9.4E-48 T 11-10-2018 IPR022161 DNA helicase IV, N-terminal domain AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Gene3D G3DSA:3.40.50.300 200 498 8.8E-50 T 11-10-2018 AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 7.2E-40 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 1.4E-17 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 SUPERFAMILY SSF52540 198 678 2.25E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23030 e06944a77e1fd893f1a6a1c0fc97fa73 689 Gene3D G3DSA:1.10.10.160 300 416 8.8E-50 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 Gene3D G3DSA:3.90.180.10 17 375 1.4E-152 T 11-10-2018 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 8.1E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 SUPERFAMILY SSF51735 171 345 3.52E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 SMART SM00829 23 378 0.0014 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 2.8E-228 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 SUPERFAMILY SSF50129 10 196 4.42E-72 T 11-10-2018 IPR011032 GroES-like superfamily AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 SUPERFAMILY SSF50129 329 379 5.65E-11 T 11-10-2018 IPR011032 GroES-like superfamily AL538_18755 f4dcfcab563006e8f70d99faf0c1bf5f 382 Gene3D G3DSA:3.40.50.720 185 323 1.4E-152 T 11-10-2018 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 SUPERFAMILY SSF53901 4 270 1.03E-84 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 SUPERFAMILY SSF53901 271 399 1.73E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 Gene3D G3DSA:3.40.47.10 126 398 1.7E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 Pfam PF02803 Thiolase, C-terminal domain 271 399 3.1E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.6E-99 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.6E-149 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 Gene3D G3DSA:3.40.47.10 6 276 1.7E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 PIRSF PIRSF000429 1 402 6.0E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AL538_22640 de5f899082b91d0bc3e5e9b03eb916f4 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AL538_18920 13fabb577d2b86070ec0802ee5694b0b 663 Pfam PF01136 Peptidase family U32 78 293 1.5E-63 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_18920 13fabb577d2b86070ec0802ee5694b0b 663 Pfam PF01136 Peptidase family U32 444 643 4.7E-8 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 Gene3D G3DSA:3.40.47.10 261 407 3.4E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 SUPERFAMILY SSF53901 3 252 4.19E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 6.8E-40 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 4.0E-28 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 SUPERFAMILY SSF53901 216 406 1.12E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 Gene3D G3DSA:3.40.47.10 1 255 8.8E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14030 3497f71500c8012a7d93a4a8b639cd17 407 SMART SM00825 Beta-ketoacyl synthase 5 377 8.0E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 Pfam PF12848 ABC transporter 208 267 7.1E-6 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 SUPERFAMILY SSF52540 354 512 1.41E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 SUPERFAMILY SSF52540 3 239 4.31E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 Gene3D G3DSA:3.40.50.300 287 520 9.0E-33 T 11-10-2018 AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 Pfam PF00005 ABC transporter 30 170 1.2E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 Pfam PF00005 ABC transporter 353 480 3.3E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 Gene3D G3DSA:3.40.50.300 2 266 8.6E-42 T 11-10-2018 AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 SMART SM00382 28 215 8.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26810 09fd82d050bfbaaccdf144bf03bc459a 523 SMART SM00382 360 523 2.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_27635 362f3ac691c4cae5528b4edb3255e567 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.7E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 SMART SM00283 244 477 2.7E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 9.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 9.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 9.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 9.8E-26 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 Gene3D G3DSA:1.10.287.950 180 482 1.4E-49 T 11-10-2018 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 SUPERFAMILY SSF58104 231 480 2.88E-45 T 11-10-2018 AL538_14905 afb9d5b3bdbd99c08e81fc210f2d368e 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 453 3.8E-33 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_15100 9921f02bc880420f186a874159566acf 148 Gene3D G3DSA:3.30.1460.10 1 131 2.0E-28 T 11-10-2018 AL538_15100 9921f02bc880420f186a874159566acf 148 Pfam PF05932 Tir chaperone protein (CesT) family 11 124 4.5E-14 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_15100 9921f02bc880420f186a874159566acf 148 SUPERFAMILY SSF69635 5 129 8.16E-23 T 11-10-2018 AL538_10485 8f0cce13c1778c2051622523db7832b5 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.6E-34 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 AL538_10485 8f0cce13c1778c2051622523db7832b5 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 4.0E-118 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 AL538_10485 8f0cce13c1778c2051622523db7832b5 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.7E-44 T 11-10-2018 IPR013527 YicC-like, N-terminal AL538_17805 8800a4760c1ead2020d73a9357045ce3 360 Gene3D G3DSA:1.10.510.10 131 241 1.5E-5 T 11-10-2018 AL538_17805 8800a4760c1ead2020d73a9357045ce3 360 SUPERFAMILY SSF56112 31 223 3.1E-14 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_00305 0aa1e19085b30fe672e33281613e3c28 78 Gene3D G3DSA:3.20.20.380 1 78 6.8E-14 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_00305 0aa1e19085b30fe672e33281613e3c28 78 SUPERFAMILY SSF110395 5 78 7.45E-10 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_00305 0aa1e19085b30fe672e33281613e3c28 78 Pfam PF03932 CutC family 3 78 2.2E-12 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_10150 8cc2a6be5978a5523e343a8ae8e16a49 224 SUPERFAMILY SSF53335 59 211 3.27E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_10150 8cc2a6be5978a5523e343a8ae8e16a49 224 Pfam PF13489 Methyltransferase domain 75 204 2.1E-17 T 11-10-2018 AL538_10150 8cc2a6be5978a5523e343a8ae8e16a49 224 Gene3D G3DSA:3.40.50.150 14 120 2.1E-5 T 11-10-2018 AL538_10150 8cc2a6be5978a5523e343a8ae8e16a49 224 Gene3D G3DSA:3.40.50.150 121 217 5.9E-10 T 11-10-2018 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.929 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 SUPERFAMILY SSF53671 4 307 6.68E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.5E-33 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.2E-45 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 Gene3D G3DSA:3.40.50.1370 8 304 5.0E-122 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 6.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 6.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 6.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 7.4E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 9.9E-117 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_07290 e5c6feeacbfaf07095c4e536d1e78c4e 309 Gene3D G3DSA:3.40.50.1370 135 292 5.0E-122 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 SUPERFAMILY SSF53850 33 529 9.77E-128 T 11-10-2018 AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 1.3E-83 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 Gene3D G3DSA:3.90.76.10 68 191 1.5E-165 T 11-10-2018 AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 Gene3D G3DSA:3.40.190.10 39 517 1.5E-165 T 11-10-2018 AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 PIRSF PIRSF002741 3 536 2.0E-102 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_01680 1d4b0c5398e8d72709765471e489d8da 536 Gene3D G3DSA:3.10.105.10 294 505 1.5E-165 T 11-10-2018 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 Gene3D G3DSA:1.10.3660.10 248 373 1.3E-49 T 11-10-2018 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 PIRSF PIRSF001499 1 374 1.6E-186 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 Pfam PF02153 Prephenate dehydrogenase 138 344 1.2E-32 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 SUPERFAMILY SSF51735 91 237 1.57E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 Gene3D G3DSA:1.20.59.10 1 80 2.7E-17 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 SUPERFAMILY SSF48179 241 366 1.93E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 SMART SM00830 9 89 3.2E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 3.9E-42 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 Pfam PF01817 Chorismate mutase type II 9 87 2.1E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 SUPERFAMILY SSF48600 4 88 6.78E-24 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AL538_12060 f08c31e36d15bcc0acd52eed0bbb5e1d 375 Gene3D G3DSA:3.40.50.720 81 247 1.4E-43 T 11-10-2018 AL538_14150 96a867d0820159bb8d9488c3cd278fc7 406 Gene3D G3DSA:3.60.120.10 6 401 1.3E-121 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_14150 96a867d0820159bb8d9488c3cd278fc7 406 SUPERFAMILY SSF56322 26 396 9.94E-87 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_14150 96a867d0820159bb8d9488c3cd278fc7 406 Pfam PF00425 chorismate binding enzyme 127 386 3.5E-71 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL538_14150 96a867d0820159bb8d9488c3cd278fc7 406 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 124 394 8.7E-85 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 Gene3D G3DSA:2.30.330.10 44 136 3.8E-34 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_05070 48378f4c0a20ed3f1a6e56adb8052a7c 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 8.1E-69 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_03190 4162ec229663140a942f357bc718a854 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 621 1.7E-61 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL538_03190 4162ec229663140a942f357bc718a854 635 Pfam PF01578 Cytochrome C assembly protein 89 294 2.6E-39 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 Pfam PF00149 Calcineurin-like phosphoesterase 39 261 2.0E-17 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 SUPERFAMILY SSF56300 34 364 5.82E-84 T 11-10-2018 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 489 508 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 245 268 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 214 231 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 420 443 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 290 310 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 PRINTS PR01607 Apyrase family signature 37 55 2.2E-41 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 Gene3D G3DSA:3.90.780.10 366 550 4.5E-52 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 SUPERFAMILY SSF55816 366 542 1.07E-46 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 514 8.1E-36 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_16150 225ccb92fd892fc8bdb21ab7413bd514 564 Gene3D G3DSA:3.60.21.10 33 365 1.1E-107 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Gene3D G3DSA:1.10.10.1800 459 550 4.2E-31 T 11-10-2018 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Gene3D G3DSA:1.10.150.570 569 622 6.7E-23 T 11-10-2018 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Pfam PF13932 GidA associated domain 403 616 8.2E-76 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Gene3D G3DSA:3.50.50.60 296 458 4.7E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Gene3D G3DSA:3.50.50.60 1 232 5.5E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Pfam PF01134 Glucose inhibited division protein A 8 399 1.5E-170 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 SMART SM01228 546 617 2.3E-42 T 11-10-2018 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.9E-294 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.678 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AL538_09645 d002b2660e67d93645b9befad6310ecc 631 SUPERFAMILY SSF51905 6 261 2.01E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_09645 d002b2660e67d93645b9befad6310ecc 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SMART SM01038 728 999 2.1E-128 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SUPERFAMILY SSF74650 714 1001 7.95E-88 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Gene3D G3DSA:2.60.40.10 208 319 3.4E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 3.6E-18 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 42 204 5.9E-50 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Gene3D G3DSA:2.70.98.10 733 1004 8.4E-83 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SUPERFAMILY SSF51445 321 599 6.57E-86 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 2.2E-115 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Gene3D G3DSA:2.60.40.10 601 703 1.4E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Gene3D G3DSA:2.60.120.260 1 207 4.0E-74 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SUPERFAMILY SSF49303 608 704 3.96E-20 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Pfam PF02929 Beta galactosidase small chain 731 998 4.8E-70 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 7.1E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 7.1E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 7.1E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 7.1E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 7.1E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Gene3D G3DSA:3.20.20.80 320 600 2.1E-102 T 11-10-2018 AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SUPERFAMILY SSF49785 2 206 1.42E-62 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 SUPERFAMILY SSF49303 209 319 2.67E-24 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL538_05915 01979b71956cc6c20b182e7b3959491f 1032 Pfam PF16353 Domain of unknown function(DUF4981) 615 700 7.4E-14 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AL538_15250 c4b6dabb61d0d0efb6d61bc4e2b74981 94 Pfam PF09059 TyeA 7 86 1.2E-31 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL538_15250 c4b6dabb61d0d0efb6d61bc4e2b74981 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.1E-27 T 11-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AL538_15250 c4b6dabb61d0d0efb6d61bc4e2b74981 94 SUPERFAMILY SSF140591 3 92 4.71E-30 T 11-10-2018 AL538_15250 c4b6dabb61d0d0efb6d61bc4e2b74981 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 2.0E-34 T 11-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AL538_15250 c4b6dabb61d0d0efb6d61bc4e2b74981 94 Gene3D G3DSA:1.20.1280.80 1 92 5.4E-36 T 11-10-2018 IPR038347 TyeA superfamily AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 Pfam PF00005 ABC transporter 24 172 8.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.6E-110 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 Gene3D G3DSA:3.40.50.300 1 234 2.9E-66 T 11-10-2018 AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 SUPERFAMILY SSF52540 4 229 9.74E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14585 0738d3790c26ffb079b6febaa2e4cf97 235 SMART SM00382 33 221 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_14995 28deb080595c00cf743d626e6167e166 357 Pfam PF02378 Phosphotransferase system, EIIC 17 280 1.1E-10 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_14995 28deb080595c00cf743d626e6167e166 357 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 334 6.4E-84 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 1.3E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 1.2E-82 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 Gene3D G3DSA:1.10.8.590 173 239 5.5E-28 T 11-10-2018 AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 PIRSF PIRSF004808 1 239 6.0E-71 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 Gene3D G3DSA:3.40.1280.10 1 163 7.7E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_12340 e8737f6a53eb66556ff7b4b83550f15b 239 SUPERFAMILY SSF75217 5 172 4.38E-37 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_19675 981e46dce4ceef74458126425927c349 277 Pfam PF04962 KduI/IolB family 70 271 4.1E-32 T 11-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL538_19675 981e46dce4ceef74458126425927c349 277 Gene3D G3DSA:2.60.120.520 30 143 1.9E-119 T 11-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL538_19675 981e46dce4ceef74458126425927c349 277 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 277 54.322 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL538_19675 981e46dce4ceef74458126425927c349 277 SUPERFAMILY SSF51182 1 261 1.56E-101 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_19675 981e46dce4ceef74458126425927c349 277 Gene3D G3DSA:2.60.120.10 10 263 1.9E-119 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_19675 981e46dce4ceef74458126425927c349 277 PIRSF PIRSF006625 1 277 1.8E-130 T 11-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AL538_09050 89896d39f79ba4f0bd2850c070be45b0 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AL538_09050 89896d39f79ba4f0bd2850c070be45b0 164 SUPERFAMILY SSF52799 8 161 8.16E-31 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AL538_09050 89896d39f79ba4f0bd2850c070be45b0 164 Gene3D G3DSA:3.90.190.10 5 164 2.2E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AL538_09050 89896d39f79ba4f0bd2850c070be45b0 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 27 128 1.3E-8 T 11-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 Gene3D G3DSA:1.25.40.10 171 318 4.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 SMART SM00028 87 120 360.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 SMART SM00028 207 240 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 SMART SM00028 127 160 29.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 SMART SM00028 167 200 450.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 Gene3D G3DSA:1.25.40.10 3 170 5.8E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17365 61190061dc1296e12bb7b53306139d6b 494 SUPERFAMILY SSF48452 121 316 1.06E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Gene3D G3DSA:3.40.50.10730 147 351 1.3E-257 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 3.6E-84 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.3E-91 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.2E-292 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 SUPERFAMILY SSF111326 11 557 1.7E-259 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Gene3D G3DSA:3.40.1770.10 22 544 1.3E-257 T 11-10-2018 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Pfam PF17391 Urocanase N-terminal domain 17 143 1.9E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 PIRSF PIRSF001423 1 563 6.4E-295 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_02160 1aac96d8eff2a45c8c82199e6b6d26df 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.398 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AL538_24685 ee89b08bf2fdf90db935acd37c2a81de 262 SUPERFAMILY SSF53474 9 247 1.77E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_24685 ee89b08bf2fdf90db935acd37c2a81de 262 Pfam PF01764 Lipase (class 3) 60 204 3.5E-28 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL538_24685 ee89b08bf2fdf90db935acd37c2a81de 262 Gene3D G3DSA:3.40.50.1820 6 236 1.8E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_26390 55620144038858d5a1bf0097d0ed672a 590 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 311 3.2E-22 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_26390 55620144038858d5a1bf0097d0ed672a 590 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.1E-34 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL538_26390 55620144038858d5a1bf0097d0ed672a 590 Gene3D G3DSA:3.40.190.10 122 332 6.3E-30 T 11-10-2018 AL538_26390 55620144038858d5a1bf0097d0ed672a 590 SUPERFAMILY SSF53850 117 588 1.07E-59 T 11-10-2018 AL538_26390 55620144038858d5a1bf0097d0ed672a 590 PIRSF PIRSF002741 91 321 9.1E-27 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_26390 55620144038858d5a1bf0097d0ed672a 590 PIRSF PIRSF002741 415 588 0.0046 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_15235 397f12bb7505756cc36ba0a6554c4507 153 Pfam PF07321 Type III secretion protein YscO 2 149 7.0E-35 T 11-10-2018 IPR009929 Type III secretion sytem,YscO AL538_00970 932e0ad3f13c9257a406320666f3fb7e 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.3E-38 T 11-10-2018 IPR006214 Bax inhibitor 1-related AL538_00970 932e0ad3f13c9257a406320666f3fb7e 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 11-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 AL538_00190 ce52b19d5495057ae5d06b22c17369ec 248 SUPERFAMILY SSF111364 29 248 8.5E-6 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AL538_24970 e44eb7248a491398b5f91aac03cf13bb 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.6E-24 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_24970 e44eb7248a491398b5f91aac03cf13bb 128 SUPERFAMILY SSF54593 1 126 2.28E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_24970 e44eb7248a491398b5f91aac03cf13bb 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 9.4E-60 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL538_24970 e44eb7248a491398b5f91aac03cf13bb 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL538_24970 e44eb7248a491398b5f91aac03cf13bb 128 Gene3D G3DSA:3.10.180.10 1 128 1.9E-47 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Gene3D G3DSA:3.40.120.10 319 442 1.2E-34 T 11-10-2018 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 SUPERFAMILY SSF53738 209 317 7.89E-8 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 SUPERFAMILY SSF53738 305 446 5.89E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 6.0E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Gene3D G3DSA:3.40.120.10 221 318 7.9E-45 T 11-10-2018 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.3E-17 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Gene3D G3DSA:3.30.310.50 443 546 5.6E-35 T 11-10-2018 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.3E-28 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 1.8E-8 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 Gene3D G3DSA:3.40.120.10 12 218 6.9E-75 T 11-10-2018 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 SUPERFAMILY SSF53738 26 235 4.24E-52 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_13715 39bee5d2086a76dfe6b9dd6c9132695a 548 SUPERFAMILY SSF55957 433 543 5.41E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 SMART SM00642 13 405 1.1E-149 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 Gene3D G3DSA:2.60.40.1180 467 544 2.2E-18 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 SUPERFAMILY SSF51445 3 462 6.48E-155 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 SUPERFAMILY SSF51011 466 543 4.06E-18 T 11-10-2018 AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 Pfam PF00128 Alpha amylase, catalytic domain 28 363 5.7E-122 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 Gene3D G3DSA:3.90.400.10 105 175 1.2E-197 T 11-10-2018 AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 538 5.0E-10 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal AL538_19950 5e7d6ee8e0a96712ef5a6464267782fb 544 Gene3D G3DSA:3.20.20.80 5 458 1.2E-197 T 11-10-2018 AL538_00075 8ccb051091cb83983a55eef937fcc928 320 SMART SM00267 145 317 9.4E-57 T 11-10-2018 IPR000160 GGDEF domain AL538_00075 8ccb051091cb83983a55eef937fcc928 320 SUPERFAMILY SSF55785 13 94 4.76E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL538_00075 8ccb051091cb83983a55eef937fcc928 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 4.3E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_00075 8ccb051091cb83983a55eef937fcc928 320 SUPERFAMILY SSF55073 161 318 5.34E-49 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_00075 8ccb051091cb83983a55eef937fcc928 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 315 1.2E-53 T 11-10-2018 IPR000160 GGDEF domain AL538_00075 8ccb051091cb83983a55eef937fcc928 320 Gene3D G3DSA:3.30.450.20 11 142 2.8E-29 T 11-10-2018 AL538_00075 8ccb051091cb83983a55eef937fcc928 320 Gene3D G3DSA:3.30.70.270 150 319 1.1E-54 T 11-10-2018 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 4.4E-58 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 SUPERFAMILY SSF52467 191 364 3.85E-63 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 2.0E-46 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 6.7E-272 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.0E-49 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 SUPERFAMILY SSF52518 373 567 1.33E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 SUPERFAMILY SSF52518 2 181 4.32E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Gene3D G3DSA:3.40.50.970 366 574 4.4E-65 T 11-10-2018 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Gene3D G3DSA:3.40.50.1220 192 362 2.9E-60 T 11-10-2018 AL538_11270 62dbc65d2f9d0fca41685a568867dad2 574 Gene3D G3DSA:3.40.50.970 1 183 6.2E-73 T 11-10-2018 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Gene3D G3DSA:1.10.357.20 277 451 4.1E-45 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Gene3D G3DSA:3.10.580.10 135 262 1.5E-37 T 11-10-2018 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Pfam PF01769 Divalent cation transporter 323 444 2.0E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 SMART SM00924 36 139 4.3E-37 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 SUPERFAMILY SSF161093 280 450 8.11E-44 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 SUPERFAMILY SSF54631 138 278 8.72E-28 T 11-10-2018 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Pfam PF03448 MgtE intracellular N domain 36 137 2.2E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 SMART SM00116 212 258 0.0014 T 11-10-2018 IPR000644 CBS domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Pfam PF00571 CBS domain 140 195 5.3E-4 T 11-10-2018 IPR000644 CBS domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Pfam PF00571 CBS domain 214 257 7.6E-5 T 11-10-2018 IPR000644 CBS domain AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 SUPERFAMILY SSF158791 12 136 1.83E-30 T 11-10-2018 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 1.1E-87 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AL538_07395 a2432673ee24153b20d3bb5f951a43b6 451 Gene3D G3DSA:1.25.60.10 8 134 5.9E-20 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AL538_13530 59cf59caeef67706fddeca44dc930681 322 SUPERFAMILY SSF64383 186 318 1.57E-48 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 186 313 1.1E-45 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 314 6.3E-86 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 187 322 2.0E-73 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 Gene3D G3DSA:3.30.1400.10 183 322 5.8E-49 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 SMART SM00771 184 314 1.9E-71 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AL538_13530 59cf59caeef67706fddeca44dc930681 322 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 316 22.452 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 AL538_05735 f50a4e2c30929e35d172e401e936c938 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_05735 f50a4e2c30929e35d172e401e936c938 403 Pfam PF00266 Aminotransferase class-V 24 392 1.9E-149 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_05735 f50a4e2c30929e35d172e401e936c938 403 Gene3D G3DSA:3.40.640.10 35 295 2.2E-163 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_05735 f50a4e2c30929e35d172e401e936c938 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 5.1E-168 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_05735 f50a4e2c30929e35d172e401e936c938 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 2.9E-156 T 11-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_05735 f50a4e2c30929e35d172e401e936c938 403 Gene3D G3DSA:3.90.1150.10 7 395 2.2E-163 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_05735 f50a4e2c30929e35d172e401e936c938 403 SUPERFAMILY SSF53383 2 400 2.45E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_05735 f50a4e2c30929e35d172e401e936c938 403 PIRSF PIRSF005572 21 403 3.2E-54 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_19785 ab8b37c65e5eccc259873c12af1c7bdf 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 154 7.6E-29 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL538_07655 32769d5e5632346c21a974056b2841ef 578 Gene3D G3DSA:3.30.413.10 432 575 7.2E-36 T 11-10-2018 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Gene3D G3DSA:3.30.413.10 146 354 3.7E-82 T 11-10-2018 AL538_07655 32769d5e5632346c21a974056b2841ef 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Gene3D G3DSA:3.90.480.20 21 422 3.7E-82 T 11-10-2018 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 6.7E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 1.9E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 SUPERFAMILY SSF56014 154 350 8.64E-58 T 11-10-2018 AL538_07655 32769d5e5632346c21a974056b2841ef 578 SUPERFAMILY SSF55124 18 150 2.45E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 7.9E-286 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 1.5E-6 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.55 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 337 6.0E-45 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07655 32769d5e5632346c21a974056b2841ef 578 SUPERFAMILY SSF56014 435 566 8.51E-34 T 11-10-2018 AL538_07655 32769d5e5632346c21a974056b2841ef 578 SUPERFAMILY SSF55124 352 429 8.07E-21 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 Gene3D G3DSA:1.10.579.10 327 447 2.6E-54 T 11-10-2018 AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 SUPERFAMILY SSF48173 229 500 2.75E-62 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 Gene3D G3DSA:3.40.50.620 8 230 3.0E-99 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 Gene3D G3DSA:1.25.40.80 132 323 3.0E-99 T 11-10-2018 AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 1.3E-67 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AL538_20750 5e51ed94b45dff6a6cdb54f826db7881 514 Gene3D G3DSA:1.10.10.1710 448 513 3.5E-24 T 11-10-2018 AL538_17690 f4e5d636bafd151aef8d735573bee6e6 158 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 3.2E-44 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_17690 f4e5d636bafd151aef8d735573bee6e6 158 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 27.133 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_17690 f4e5d636bafd151aef8d735573bee6e6 158 Gene3D G3DSA:3.30.1060.10 1 157 2.4E-42 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_17690 f4e5d636bafd151aef8d735573bee6e6 158 SUPERFAMILY SSF55068 1 148 6.02E-50 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_17690 f4e5d636bafd151aef8d735573bee6e6 158 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 145 3.9E-32 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 Pfam PF13580 SIS domain 48 172 4.8E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 SUPERFAMILY SSF53697 12 256 2.22E-72 T 11-10-2018 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.514 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 Gene3D G3DSA:3.40.50.10490 8 225 2.3E-78 T 11-10-2018 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 Gene3D G3DSA:1.10.8.1080 226 304 5.8E-31 T 11-10-2018 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 4.9E-131 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 AL538_12040 2b0c438d701e209ad36789b8ddd36032 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 AL538_12515 4497873071e029029130141ae359d47f 426 Pfam PF01458 Uncharacterized protein family (UPF0051) 169 396 7.1E-67 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AL538_12515 4497873071e029029130141ae359d47f 426 SUPERFAMILY SSF101960 24 421 4.18E-94 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AL538_12515 4497873071e029029130141ae359d47f 426 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 134 410 1.8E-74 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AL538_13455 86c176248763c9dfd5d76a5b79515fe7 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_13455 86c176248763c9dfd5d76a5b79515fe7 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 6.7E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_13455 86c176248763c9dfd5d76a5b79515fe7 249 SUPERFAMILY SSF117143 77 207 2.62E-16 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_13455 86c176248763c9dfd5d76a5b79515fe7 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.8E-33 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_07445 0fe85ddfbf062703da2211ceb7b4e8c4 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 1.4E-56 T 11-10-2018 IPR032712 AsmA-like, C-terminal AL538_07445 0fe85ddfbf062703da2211ceb7b4e8c4 1292 Pfam PF13116 Protein of unknown function 506 792 2.8E-94 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 AL538_07445 0fe85ddfbf062703da2211ceb7b4e8c4 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 Gene3D G3DSA:3.40.190.10 171 277 2.0E-35 T 11-10-2018 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 Pfam PF03466 LysR substrate binding domain 96 304 1.9E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 SUPERFAMILY SSF46785 2 83 1.36E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 Gene3D G3DSA:3.40.190.10 89 301 2.0E-35 T 11-10-2018 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 Gene3D G3DSA:1.10.10.10 1 85 7.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20085 6ba75d02a0fe88ad57252fe9205a5c8b 313 SUPERFAMILY SSF53850 89 305 1.57E-30 T 11-10-2018 AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 Gene3D G3DSA:1.10.10.10 11 110 8.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 SUPERFAMILY SSF46785 17 104 2.95E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_26410 dfcc5fb307b57c57f415f1bb57f687a8 113 SMART SM00418 28 106 8.5E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 Gene3D G3DSA:3.40.190.10 93 298 8.9E-21 T 11-10-2018 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 Pfam PF03466 LysR substrate binding domain 99 301 4.7E-14 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 SUPERFAMILY SSF53850 92 303 9.41E-20 T 11-10-2018 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 Gene3D G3DSA:3.40.190.10 174 272 8.9E-21 T 11-10-2018 AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 Gene3D G3DSA:1.10.10.10 1 89 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22270 c406bc9d138cefd490ba6f481ce402e2 313 SUPERFAMILY SSF46785 7 84 2.32E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13800 c45ff96f061ad0d6bdd20a4e2823a2db 75 SMART SM00899 1 74 1.7E-23 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL538_13800 c45ff96f061ad0d6bdd20a4e2823a2db 75 SUPERFAMILY SSF50037 4 74 1.17E-18 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AL538_13800 c45ff96f061ad0d6bdd20a4e2823a2db 75 Gene3D G3DSA:2.30.30.90 1 75 8.0E-24 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AL538_13800 c45ff96f061ad0d6bdd20a4e2823a2db 75 Pfam PF04023 FeoA domain 1 74 2.4E-19 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:2.10.10.20 11 79 1.2E-12 T 11-10-2018 AL538_05605 ed895ccb4481c63119264842b445567f 846 SMART SM00495 277 326 0.21 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_05605 ed895ccb4481c63119264842b445567f 846 SMART SM00495 28 74 3.1E-10 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:3.20.20.80 522 842 7.6E-77 T 11-10-2018 AL538_05605 ed895ccb4481c63119264842b445567f 846 SMART SM00636 523 825 3.5E-4 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_05605 ed895ccb4481c63119264842b445567f 846 SUPERFAMILY SSF51445 522 833 5.21E-48 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_05605 ed895ccb4481c63119264842b445567f 846 SUPERFAMILY SSF51055 18 78 6.02E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_05605 ed895ccb4481c63119264842b445567f 846 ProSitePatterns PS01095 Chitinases family 18 active site. 637 645 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:2.60.40.10 179 271 1.9E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:2.60.40.10 84 175 2.1E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:2.60.40.10 335 427 2.9E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_05605 ed895ccb4481c63119264842b445567f 846 Pfam PF00704 Glycosyl hydrolases family 18 525 825 1.2E-24 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_05605 ed895ccb4481c63119264842b445567f 846 Gene3D G3DSA:2.60.40.10 429 521 7.8E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Gene3D G3DSA:3.50.30.30 335 480 6.4E-157 T 11-10-2018 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 584 652 7.5E-11 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Pfam PF01483 Proprotein convertase P-domain 711 790 4.9E-21 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 SUPERFAMILY SSF49785 679 790 6.38E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 SUPERFAMILY SSF54897 41 119 9.35E-5 T 11-10-2018 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Gene3D G3DSA:2.60.120.260 677 791 4.1E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Pfam PF00082 Subtilase family 478 538 1.6E-13 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Pfam PF02225 PA domain 375 465 6.7E-7 T 11-10-2018 IPR003137 PA domain AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 2.4E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 2.4E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 2.4E-15 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Gene3D G3DSA:2.60.120.380 564 665 3.1E-33 T 11-10-2018 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Gene3D G3DSA:3.40.50.200 144 545 6.4E-157 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Gene3D G3DSA:3.30.70.80 37 125 7.4E-6 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 SUPERFAMILY SSF52743 123 549 3.82E-100 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_20855 7200b4254e6f68f43f5fd48ecc7b40c5 791 Pfam PF00082 Subtilase family 146 374 2.8E-25 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL538_25620 84a9ba3c74466cf29f4418c5012bfab7 279 SUPERFAMILY SSF52768 32 250 1.39E-21 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL538_25620 84a9ba3c74466cf29f4418c5012bfab7 279 Gene3D G3DSA:3.40.800.10 41 245 1.8E-7 T 11-10-2018 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 44.601 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 5.6E-81 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 SUPERFAMILY SSF53335 7 279 5.09E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 Pfam PF13847 Methyltransferase domain 117 247 1.1E-17 T 11-10-2018 IPR025714 Methyltransferase domain AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 Gene3D G3DSA:1.10.8.10 6 90 8.4E-26 T 11-10-2018 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 6.9E-93 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AL538_13275 114355b89dae11d2aa8d51f8ef5587b2 285 Gene3D G3DSA:3.40.50.150 91 283 1.8E-58 T 11-10-2018 AL538_17175 56864eacc6c7cb04d8bdd0f9b63f2c46 309 Gene3D G3DSA:1.10.3720.10 68 309 1.9E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17175 56864eacc6c7cb04d8bdd0f9b63f2c46 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 306 1.3E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17175 56864eacc6c7cb04d8bdd0f9b63f2c46 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 14 307 1.9E-84 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL538_17175 56864eacc6c7cb04d8bdd0f9b63f2c46 309 SUPERFAMILY SSF161098 19 305 1.4E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_23795 83d3818b6e7e9e2c653c23edc1c98aa2 204 Pfam PF00929 Exonuclease 8 163 2.8E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_23795 83d3818b6e7e9e2c653c23edc1c98aa2 204 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 180 2.3E-28 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_23795 83d3818b6e7e9e2c653c23edc1c98aa2 204 SUPERFAMILY SSF53098 4 178 2.19E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_23795 83d3818b6e7e9e2c653c23edc1c98aa2 204 Gene3D G3DSA:3.30.420.10 2 176 2.8E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_23795 83d3818b6e7e9e2c653c23edc1c98aa2 204 SMART SM00479 6 173 9.9E-39 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 Gene3D G3DSA:2.40.40.10 83 177 6.6E-39 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 SUPERFAMILY SSF110997 190 261 4.32E-12 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 Pfam PF05036 Sporulation related domain 190 260 7.9E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 Pfam PF03330 Lytic transglycolase 84 173 2.8E-28 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 SUPERFAMILY SSF50685 88 173 6.98E-11 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 248 4.3E-47 T 11-10-2018 IPR012997 Rare lipoprotein A AL538_13060 f99fcb33d4fa5c42c8f32b0efe730e2a 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.315 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AL538_04950 47830550ffb8e3eadacb03700865ec9f 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 7.4E-71 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AL538_04950 47830550ffb8e3eadacb03700865ec9f 184 Gene3D G3DSA:3.40.30.10 20 184 2.7E-45 T 11-10-2018 AL538_04950 47830550ffb8e3eadacb03700865ec9f 184 Pfam PF08534 Redoxin 41 164 1.8E-27 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_04950 47830550ffb8e3eadacb03700865ec9f 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_04950 47830550ffb8e3eadacb03700865ec9f 184 SUPERFAMILY SSF52833 46 177 1.01E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_02735 395d96aef23de745d680558457af2fa8 266 SUPERFAMILY SSF52980 4 122 3.22E-16 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_02735 395d96aef23de745d680558457af2fa8 266 Pfam PF04471 Restriction endonuclease 5 121 2.5E-12 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AL538_02735 395d96aef23de745d680558457af2fa8 266 Gene3D G3DSA:3.40.1350.10 4 125 1.0E-6 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL538_14445 e0091894ee343f999b3207ef0fe51c7e 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 8.7E-96 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AL538_14445 e0091894ee343f999b3207ef0fe51c7e 286 Pfam PF13622 Thioesterase-like superfamily 33 282 7.7E-61 T 11-10-2018 AL538_14445 e0091894ee343f999b3207ef0fe51c7e 286 Gene3D G3DSA:3.10.129.90 2 286 1.4E-107 T 11-10-2018 AL538_14445 e0091894ee343f999b3207ef0fe51c7e 286 SUPERFAMILY SSF54637 116 283 2.95E-59 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_14445 e0091894ee343f999b3207ef0fe51c7e 286 SUPERFAMILY SSF54637 6 114 9.39E-40 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_21400 cc7061e433065129820ee1831ecfc783 450 SMART SM00382 166 349 9.0E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21400 cc7061e433065129820ee1831ecfc783 450 SUPERFAMILY SSF52540 102 370 5.5E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21400 cc7061e433065129820ee1831ecfc783 450 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_21400 cc7061e433065129820ee1831ecfc783 450 Gene3D G3DSA:3.40.50.12240 22 448 1.3E-150 T 11-10-2018 AL538_21400 cc7061e433065129820ee1831ecfc783 450 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 4.4E-189 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_21400 cc7061e433065129820ee1831ecfc783 450 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 7.6E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_21400 cc7061e433065129820ee1831ecfc783 450 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 1.5E-164 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_00410 c75ddfc3dd81eb83a73334ccf1ad1dd0 237 SUPERFAMILY SSF103088 128 212 1.83E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_00410 c75ddfc3dd81eb83a73334ccf1ad1dd0 237 Gene3D G3DSA:3.30.1330.60 127 235 4.8E-13 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_00410 c75ddfc3dd81eb83a73334ccf1ad1dd0 237 Pfam PF00691 OmpA family 135 225 2.4E-10 T 11-10-2018 IPR006665 OmpA-like domain AL538_25235 af1fdd531f1b97fbf141aa9201ddfc63 738 Gene3D G3DSA:3.20.20.450 472 732 5.0E-71 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25235 af1fdd531f1b97fbf141aa9201ddfc63 738 SUPERFAMILY SSF141868 489 736 7.19E-66 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25235 af1fdd531f1b97fbf141aa9201ddfc63 738 SMART SM00052 482 729 1.6E-61 T 11-10-2018 IPR001633 EAL domain AL538_25235 af1fdd531f1b97fbf141aa9201ddfc63 738 Pfam PF00563 EAL domain 491 724 1.6E-57 T 11-10-2018 IPR001633 EAL domain AL538_22710 43a67b016a27b842c2bece892edbf8a1 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL538_22710 43a67b016a27b842c2bece892edbf8a1 152 Gene3D G3DSA:3.40.140.10 2 151 1.6E-40 T 11-10-2018 AL538_22710 43a67b016a27b842c2bece892edbf8a1 152 SUPERFAMILY SSF53927 8 142 2.61E-31 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_22710 43a67b016a27b842c2bece892edbf8a1 152 PIRSF PIRSF006019 1 148 2.8E-44 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL538_22710 43a67b016a27b842c2bece892edbf8a1 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 3.1E-25 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL538_12355 837a3c468d54172293f1e78ba1c68945 127 SUPERFAMILY SSF82649 1 125 7.06E-48 T 11-10-2018 AL538_12355 837a3c468d54172293f1e78ba1c68945 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.4E-69 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL538_12355 837a3c468d54172293f1e78ba1c68945 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.2E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL538_12355 837a3c468d54172293f1e78ba1c68945 127 Gene3D G3DSA:3.90.1010.10 1 127 6.3E-59 T 11-10-2018 AL538_02140 845810d74e1844c33b622302d536f154 247 Pfam PF07070 SpoOM protein 2 215 2.2E-62 T 11-10-2018 IPR009776 Sporulation stage 0, protein M AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 SMART SM00382 122 247 0.0068 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Pfam PF00437 Type II/IV secretion system protein 12 270 5.2E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 11-10-2018 AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 SUPERFAMILY SSF52540 5 336 1.18E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 Gene3D G3DSA:3.40.50.300 101 345 1.6E-102 T 11-10-2018 AL538_06995 2bf7ba402e716afa2dfc6cf0e574e0d1 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 334 2.2E-152 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 92 155 3.1E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 396 1.5E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 SUPERFAMILY SSF161098 91 160 5.89E-12 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 Gene3D G3DSA:1.10.3720.10 79 187 1.6E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 Gene3D G3DSA:1.10.3720.10 190 397 8.7E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00955 4731164f8aa21140b9389fe25626e3e0 401 SUPERFAMILY SSF161098 194 382 4.71E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 SUPERFAMILY SSF52540 142 385 7.1E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Pfam PF00158 Sigma-54 interaction domain 143 308 1.3E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Pfam PF00072 Response regulator receiver domain 5 114 4.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 SMART SM00382 162 304 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 SUPERFAMILY SSF52172 3 186 1.1E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Gene3D G3DSA:1.10.10.60 463 506 1.3E-7 T 11-10-2018 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Pfam PF02954 Bacterial regulatory protein, Fis family 469 505 7.2E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Gene3D G3DSA:3.40.50.300 134 313 5.0E-64 T 11-10-2018 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 SUPERFAMILY SSF46689 462 510 7.62E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 SMART SM00448 3 114 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Gene3D G3DSA:3.40.50.2300 1 133 2.6E-30 T 11-10-2018 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_00010 acc7b57dab8641c5fefee5d8eace6788 519 Gene3D G3DSA:1.10.8.60 314 394 9.7E-26 T 11-10-2018 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 1.5E-25 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 SUPERFAMILY SSF102114 37 362 5.76E-57 T 11-10-2018 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 9.7E-181 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 Gene3D G3DSA:3.20.20.70 8 363 1.2E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 Pfam PF04055 Radical SAM superfamily 81 221 3.7E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_09320 36c812faf1ebdf169ef7492e10fea051 370 SMART SM00876 256 359 3.2E-35 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_05595 c79bc7a8301199b48bf4252640c87ad3 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 7.0E-20 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 AL538_12880 770ab07764070503ade4e0c4686c5f30 167 SUPERFAMILY SSF101307 9 160 7.85E-50 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AL538_12880 770ab07764070503ade4e0c4686c5f30 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 5.9E-53 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AL538_12880 770ab07764070503ade4e0c4686c5f30 167 PIRSF PIRSF006162 6 166 3.3E-54 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 SUPERFAMILY SSF63380 93 198 3.66E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 PIRSF PIRSF000498 1 203 5.5E-68 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 SUPERFAMILY SSF63380 1 93 6.97E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 Gene3D G3DSA:2.40.30.20 1 89 7.2E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 Pfam PF00677 Lumazine binding domain 3 87 5.5E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 Pfam PF00677 Lumazine binding domain 100 184 3.5E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.1E-74 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_00055 3e3483a5aeaf3d3c1523c4e244fae5fc 203 Gene3D G3DSA:2.40.30.20 94 190 1.9E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_11980 620a0885ed3801157e9992485542a19e 86 SUPERFAMILY SSF46992 3 86 1.83E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11980 620a0885ed3801157e9992485542a19e 86 Gene3D G3DSA:1.20.58.110 1 86 4.4E-30 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11980 620a0885ed3801157e9992485542a19e 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 7.0E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11980 620a0885ed3801157e9992485542a19e 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.687 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11980 620a0885ed3801157e9992485542a19e 86 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_11980 620a0885ed3801157e9992485542a19e 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 9.4E-32 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_14200 7911d0997e807a2575127d0cbd25540e 455 Pfam PF02386 Cation transport protein 52 437 4.6E-56 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL538_14200 7911d0997e807a2575127d0cbd25540e 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.1E-124 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_09140 4e095d81b5ab98add523b10cd22dba03 842 PIRSF PIRSF001444 1 842 0.0 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL538_09140 4e095d81b5ab98add523b10cd22dba03 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 1.3E-77 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AL538_09140 4e095d81b5ab98add523b10cd22dba03 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 7.6E-254 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 Gene3D G3DSA:3.30.70.1560 132 205 3.0E-53 T 11-10-2018 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 Pfam PF01479 S4 domain 8 52 1.6E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 SUPERFAMILY SSF55174 7 97 1.24E-14 T 11-10-2018 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 SMART SM00363 7 65 1.1E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 SUPERFAMILY SSF55120 66 227 2.27E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 Gene3D G3DSA:3.30.70.580 68 227 3.0E-53 T 11-10-2018 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 Gene3D G3DSA:3.10.290.10 1 61 4.0E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 Pfam PF00849 RNA pseudouridylate synthase 67 193 4.7E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 1.5E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_13305 c7e2950f0a5679a7a05ba1fdcd957059 369 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.688 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 Gene3D G3DSA:3.40.50.1380 1 151 2.1E-65 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 PIRSF PIRSF006614 8 151 1.2E-63 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 SUPERFAMILY SSF52335 3 150 1.5E-57 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 SMART SM00851 25 118 1.8E-22 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 Pfam PF02142 MGS-like domain 25 118 3.4E-18 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL538_23035 bc59f212da2c03e892bdbc0804732ca2 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 2.6E-64 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 SUPERFAMILY SSF51445 115 527 2.49E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Pfam PF16657 Maltogenic Amylase, C-terminal domain 527 600 3.7E-8 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 SUPERFAMILY SSF81296 1 109 8.75E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 1.6E-77 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 SUPERFAMILY SSF51011 527 607 3.55E-14 T 11-10-2018 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Gene3D G3DSA:3.20.20.80 114 520 2.1E-135 T 11-10-2018 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Gene3D G3DSA:2.60.40.1180 521 607 3.0E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 4 104 6.4E-5 T 11-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 Gene3D G3DSA:2.60.40.10 5 111 2.7E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 PIRSF PIRSF036918 1 608 4.7E-251 T 11-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 AL538_04015 8bacb361de1ff2310be1bdbe5b54a38d 608 SMART SM00642 126 518 9.6E-89 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 PIRSF PIRSF000151 1 416 2.3E-164 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 SUPERFAMILY SSF53720 3 408 4.19E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 Pfam PF00171 Aldehyde dehydrogenase family 5 280 1.9E-14 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 Gene3D G3DSA:3.40.309.10 223 373 1.9E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.7E-166 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.071 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AL538_12840 bcc181467958d0dbd8cae76434de1f4b 416 Gene3D G3DSA:3.40.605.10 15 408 1.9E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 Gene3D G3DSA:3.30.1360.60 394 475 8.8E-29 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 1.2E-20 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 5.8E-75 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_03855 ba9981282ba1e771c2286f1f954811fe 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 2.6E-197 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 SMART SM00422 1 70 3.7E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 5.3E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 Gene3D G3DSA:1.10.1660.10 1 125 2.5E-31 T 11-10-2018 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 1.0E-61 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AL538_25675 c02739ba2e23d5e119266ea57f809632 128 SUPERFAMILY SSF46955 1 126 4.76E-33 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 ProSitePatterns PS00447 DNA polymerase family A signature. 1137 1156 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 Gene3D G3DSA:3.30.70.370 1062 1309 5.7E-54 T 11-10-2018 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 Gene3D G3DSA:1.10.150.20 1102 1235 5.7E-54 T 11-10-2018 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 Pfam PF00476 DNA polymerase family A 986 1311 3.9E-49 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 SUPERFAMILY SSF56672 932 1296 1.78E-61 T 11-10-2018 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 PRINTS PR00868 DNA-polymerase family A (pol I) signature 1054 1076 9.2E-9 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 PRINTS PR00868 DNA-polymerase family A (pol I) signature 1196 1207 9.2E-9 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 PRINTS PR00868 DNA-polymerase family A (pol I) signature 1256 1269 9.2E-9 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 PRINTS PR00868 DNA-polymerase family A (pol I) signature 1228 1244 9.2E-9 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_21545 3b13bf5bedecf3982c60551ad8fc5cc3 1332 SMART SM00482 1079 1273 3.3E-24 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_23055 e4a6467620178a5afd34438f16c9dd13 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 1.2E-297 T 11-10-2018 IPR010706 Fatty acid cis-trans isomerase AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Gene3D G3DSA:3.40.605.10 548 1036 9.3E-149 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1035 4.4E-246 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 PIRSF PIRSF000197 3 1042 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 SUPERFAMILY SSF51730 190 532 7.45E-116 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.8E-45 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Pfam PF01619 Proline dehydrogenase 197 490 4.7E-93 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Gene3D G3DSA:3.20.20.220 150 525 1.1E-130 T 11-10-2018 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1035 2.5E-118 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 SUPERFAMILY SSF53720 551 1037 1.57E-126 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 SUPERFAMILY SSF81935 17 188 6.15E-63 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 Gene3D G3DSA:3.40.309.10 813 1005 9.3E-149 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_19570 808eb589f0f0d4c9df86e1cdac0199c6 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 SUPERFAMILY SSF55729 5 229 2.91E-87 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 Gene3D G3DSA:3.40.630.70 63 235 9.2E-62 T 11-10-2018 AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 Gene3D G3DSA:2.30.210.20 5 62 1.0E-23 T 11-10-2018 AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 1.0E-68 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 90.907 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL538_14770 abe5eba61eb5ed368fe56531565c7686 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 218 7.7E-76 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.2E-270 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 11-10-2018 IPR003607 HD/PDEase domain AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF13291 ACT domain 627 703 4.4E-14 T 11-10-2018 IPR002912 ACT domain AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.30.460.10 193 325 2.5E-46 T 11-10-2018 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 11-10-2018 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SMART SM00471 41 153 4.3E-11 T 11-10-2018 IPR003607 HD/PDEase domain AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:3.30.70.260 627 706 1.4E-12 T 11-10-2018 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF55021 631 703 7.08E-7 T 11-10-2018 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SMART SM00954 235 345 6.9E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 SUPERFAMILY SSF81301 180 393 2.78E-59 T 11-10-2018 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL538_10385 77ffbb2f91629b5835a0b089a22477d3 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 11-10-2018 AL538_20220 2ff8940694491d5e296d4cb5df0bf016 147 SUPERFAMILY SSF47175 23 145 1.62E-29 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL538_20220 2ff8940694491d5e296d4cb5df0bf016 147 Pfam PF01322 Cytochrome C' 28 144 3.9E-22 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AL538_20220 2ff8940694491d5e296d4cb5df0bf016 147 Gene3D G3DSA:1.20.120.10 23 145 5.3E-24 T 11-10-2018 AL538_03925 dd8d25dbb80544154081d257139963aa 193 Gene3D G3DSA:3.90.950.10 5 193 4.2E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_03925 dd8d25dbb80544154081d257139963aa 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.26 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_03925 dd8d25dbb80544154081d257139963aa 193 Pfam PF02545 Maf-like protein 5 187 2.2E-44 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_03925 dd8d25dbb80544154081d257139963aa 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 9.7E-52 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_03925 dd8d25dbb80544154081d257139963aa 193 PIRSF PIRSF006305 1 193 1.1E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_03925 dd8d25dbb80544154081d257139963aa 193 SUPERFAMILY SSF52972 1 187 2.49E-58 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 Pfam PF12464 Maltose acetyltransferase 7 50 1.0E-6 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 2.7E-10 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 SUPERFAMILY SSF51161 4 180 3.47E-47 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 SMART SM01266 4 56 8.7E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_25105 1ed3e40922eaef234959fbb1cefc741e 181 Gene3D G3DSA:2.160.10.10 1 181 1.1E-60 T 11-10-2018 AL538_17765 015791ba4f295f91e480c9da6a668188 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 6.1E-149 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL538_17765 015791ba4f295f91e480c9da6a668188 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 1.8E-138 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL538_17765 015791ba4f295f91e480c9da6a668188 806 Gene3D G3DSA:2.70.98.10 45 396 2.9E-205 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_17765 015791ba4f295f91e480c9da6a668188 806 Gene3D G3DSA:1.20.1610.10 500 669 2.9E-205 T 11-10-2018 AL538_17765 015791ba4f295f91e480c9da6a668188 806 Gene3D G3DSA:3.30.2080.10 342 796 2.9E-205 T 11-10-2018 AL538_17765 015791ba4f295f91e480c9da6a668188 806 SUPERFAMILY SSF48208 307 776 4.59E-22 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_17765 015791ba4f295f91e480c9da6a668188 806 Gene3D G3DSA:1.20.1050.60 397 499 2.9E-205 T 11-10-2018 AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 PIRSF PIRSF038941 1 372 3.2E-125 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 SUPERFAMILY SSF50621 212 359 8.58E-23 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 Gene3D G3DSA:2.40.37.10 7 372 1.4E-141 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 Gene3D G3DSA:3.20.20.10 15 242 1.4E-141 T 11-10-2018 IPR029066 PLP-binding barrel AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 SUPERFAMILY SSF51419 14 242 1.0E-41 T 11-10-2018 IPR029066 PLP-binding barrel AL538_03270 4473c72696ae4bf299fcb1890e92f590 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 2.5E-161 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AL538_25880 5849fb88457917610c5f9ea5e979a127 280 SUPERFAMILY SSF161098 88 272 5.76E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25880 5849fb88457917610c5f9ea5e979a127 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 3.6E-127 T 11-10-2018 IPR017784 ABC transporter, choline, permease protein AL538_25880 5849fb88457917610c5f9ea5e979a127 280 Gene3D G3DSA:1.10.3720.10 86 274 2.5E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_25880 5849fb88457917610c5f9ea5e979a127 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 2.2E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 Gene3D G3DSA:1.10.1200.10 220 296 1.9E-26 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 Pfam PF00857 Isochorismatase family 30 203 3.7E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 61 78 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 110 132 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 166 184 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 184 201 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 78 97 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PRINTS PR01398 Isochorismatase signature 2 14 1.2E-44 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 SUPERFAMILY SSF52499 7 208 1.57E-57 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 PIRSF PIRSF001111 1 296 1.7E-125 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 Gene3D G3DSA:3.40.50.850 1 209 2.6E-74 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 SUPERFAMILY SSF47336 226 295 5.23E-11 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14160 d4ffc2c9ac784e0802fa438ec90a7284 296 Pfam PF00550 Phosphopantetheine attachment site 227 288 3.4E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL538_23660 754e349f15b2b602b51b8be3428f5918 127 SMART SM00422 4 71 2.5E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_23660 754e349f15b2b602b51b8be3428f5918 127 Gene3D G3DSA:1.10.1660.10 2 126 5.0E-27 T 11-10-2018 AL538_23660 754e349f15b2b602b51b8be3428f5918 127 SUPERFAMILY SSF46955 4 117 2.09E-26 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_23660 754e349f15b2b602b51b8be3428f5918 127 Pfam PF00376 MerR family regulatory protein 5 40 3.9E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_23660 754e349f15b2b602b51b8be3428f5918 127 Pfam PF09278 MerR, DNA binding 47 110 3.0E-17 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AL538_09585 278284f081677a0ef80eafb666542c11 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.746 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 6.6E-12 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AL538_09585 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:2.60.15.10 4 91 2.5E-31 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 Gene3D G3DSA:1.20.5.440 92 135 2.5E-19 T 11-10-2018 AL538_09585 278284f081677a0ef80eafb666542c11 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 8.6E-44 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 7.0E-41 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 SUPERFAMILY SSF46604 89 138 1.49E-14 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09585 278284f081677a0ef80eafb666542c11 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.3E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_02435 2f70d3e528f630bb90afad4eb357dd7f 158 SUPERFAMILY SSF160424 1 110 1.7E-13 T 11-10-2018 IPR036170 Probable antitoxin YezG superfamily AL538_02435 2f70d3e528f630bb90afad4eb357dd7f 158 Gene3D G3DSA:3.30.500.20 1 110 2.2E-7 T 11-10-2018 AL538_02435 2f70d3e528f630bb90afad4eb357dd7f 158 Pfam PF04634 Protein of unknown function, DUF600 6 109 2.4E-6 T 11-10-2018 IPR006728 Protein of unknown function DUF600 AL538_07435 926b8964ee7a94b23c970153ab49934f 481 PIRSF PIRSF004919 14 481 6.7E-143 T 11-10-2018 IPR025502 TldD AL538_07435 926b8964ee7a94b23c970153ab49934f 481 Gene3D G3DSA:3.30.2290.10 8 240 1.3E-15 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL538_07435 926b8964ee7a94b23c970153ab49934f 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 5.7E-65 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL538_07435 926b8964ee7a94b23c970153ab49934f 481 SUPERFAMILY SSF111283 18 480 5.62E-129 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL538_16790 cc02fa58b87633a51e9bb958a26c31dc 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 171 1.1E-32 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AL538_16790 cc02fa58b87633a51e9bb958a26c31dc 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 173 18.783 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AL538_16790 cc02fa58b87633a51e9bb958a26c31dc 176 SUPERFAMILY SSF55144 1 171 2.96E-27 T 11-10-2018 IPR009097 Cyclic phosphodiesterase AL538_16790 cc02fa58b87633a51e9bb958a26c31dc 176 Gene3D G3DSA:3.90.1140.10 1 173 4.7E-34 T 11-10-2018 AL538_16790 cc02fa58b87633a51e9bb958a26c31dc 176 Pfam PF13563 2'-5' RNA ligase superfamily 29 152 2.0E-12 T 11-10-2018 AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 126 6.5E-6 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 SUPERFAMILY SSF47616 132 278 5.73E-31 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 Gene3D G3DSA:1.20.1050.10 132 248 5.3E-110 T 11-10-2018 AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 2.3E-9 T 11-10-2018 AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 SUPERFAMILY SSF52833 38 130 4.98E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_27030 f4131735bce04cca59fd0775f6d4654a 286 Gene3D G3DSA:3.40.30.10 17 254 5.3E-110 T 11-10-2018 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 SUPERFAMILY SSF63882 7 180 1.83E-56 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Gene3D G3DSA:2.40.340.10 332 401 5.7E-146 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Gene3D G3DSA:3.90.105.10 31 178 5.7E-146 T 11-10-2018 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Gene3D G3DSA:3.40.980.10 179 331 5.7E-146 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Gene3D G3DSA:2.170.190.11 53 145 5.7E-146 T 11-10-2018 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.3E-47 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 3.2E-25 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_26100 022df0863de4e3f792d1c277d34470e5 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_26100 022df0863de4e3f792d1c277d34470e5 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 7.0E-33 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_26100 022df0863de4e3f792d1c277d34470e5 411 SMART SM00852 184 321 1.1E-41 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_26100 022df0863de4e3f792d1c277d34470e5 411 SUPERFAMILY SSF53218 181 327 1.57E-41 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.1E-136 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 SUPERFAMILY SSF51556 1 341 4.4E-146 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 Pfam PF01979 Amidohydrolase family 11 315 1.3E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 PIRSF PIRSF001237 1 342 2.2E-142 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.689 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_22215 cd289718917d8c53b69d659cd21ffd41 342 Gene3D G3DSA:3.20.20.140 2 342 3.5E-111 T 11-10-2018 AL538_20065 e723b3e642ec7284f297b817784fd721 253 SMART SM00382 26 213 3.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_20065 e723b3e642ec7284f297b817784fd721 253 Gene3D G3DSA:3.40.50.300 1 251 1.1E-60 T 11-10-2018 AL538_20065 e723b3e642ec7284f297b817784fd721 253 SUPERFAMILY SSF52540 2 226 1.86E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20065 e723b3e642ec7284f297b817784fd721 253 Pfam PF00005 ABC transporter 18 164 7.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_20065 e723b3e642ec7284f297b817784fd721 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_18895 8589d53628a74fe1f7774a206e1f1136 131 SUPERFAMILY SSF51316 11 130 2.09E-32 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_18895 8589d53628a74fe1f7774a206e1f1136 131 Gene3D G3DSA:2.170.150.70 15 131 4.4E-38 T 11-10-2018 AL538_18895 8589d53628a74fe1f7774a206e1f1136 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 8.3E-10 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL538_24825 90489a7b4545f35c6e630369dcd3c13e 124 PIRSF PIRSF019853 2 124 1.1E-25 T 11-10-2018 IPR016767 Uncharacterised conserved protein UCP019853 AL538_20965 9c85ecee301c5517df2e4e7f3e062546 296 SUPERFAMILY SSF53850 89 287 9.41E-14 T 11-10-2018 AL538_20965 9c85ecee301c5517df2e4e7f3e062546 296 Gene3D G3DSA:1.10.10.10 1 85 5.6E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20965 9c85ecee301c5517df2e4e7f3e062546 296 Gene3D G3DSA:3.40.190.10 87 284 6.8E-12 T 11-10-2018 AL538_20965 9c85ecee301c5517df2e4e7f3e062546 296 Gene3D G3DSA:3.40.190.10 168 259 6.8E-12 T 11-10-2018 AL538_20965 9c85ecee301c5517df2e4e7f3e062546 296 SUPERFAMILY SSF46785 3 82 5.17E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_02110 cb5a2f7db38fcc45e73f96294cb64933 126 Gene3D G3DSA:3.30.1330.40 3 124 1.2E-24 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_02110 cb5a2f7db38fcc45e73f96294cb64933 126 SUPERFAMILY SSF55298 2 121 4.87E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_02110 cb5a2f7db38fcc45e73f96294cb64933 126 Pfam PF01042 Endoribonuclease L-PSP 11 121 3.0E-20 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 SUPERFAMILY SSF51713 3 366 1.12E-164 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 371 5.5E-178 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 1.3E-186 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 Gene3D G3DSA:3.20.20.105 1 370 7.1E-175 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.44 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_12305 ba433f1df8dedfca1990ff84dd6eb95f 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 6.8E-97 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AL538_18825 c90fc06a1290775a3fc2d0d6945d6a66 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 277 7.5E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_18825 c90fc06a1290775a3fc2d0d6945d6a66 294 SUPERFAMILY SSF161098 25 294 1.44E-61 T 11-10-2018 IPR035906 MetI-like superfamily AL538_18825 c90fc06a1290775a3fc2d0d6945d6a66 294 Gene3D G3DSA:1.10.3720.10 19 285 1.9E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL538_18670 74e0f4806e6dfe94f2c9e92002dd514d 323 SUPERFAMILY SSF53850 28 322 3.3E-79 T 11-10-2018 AL538_18670 74e0f4806e6dfe94f2c9e92002dd514d 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 321 2.9E-98 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_18670 74e0f4806e6dfe94f2c9e92002dd514d 323 Pfam PF16868 NMT1-like family 32 321 2.7E-91 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_18670 74e0f4806e6dfe94f2c9e92002dd514d 323 Gene3D G3DSA:3.40.190.10 119 257 4.1E-98 T 11-10-2018 AL538_18670 74e0f4806e6dfe94f2c9e92002dd514d 323 Gene3D G3DSA:3.40.190.10 32 321 4.1E-98 T 11-10-2018 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Pfam PF11798 IMS family HHH motif 170 200 7.9E-6 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 SUPERFAMILY SSF100879 245 353 7.26E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 SUPERFAMILY SSF56672 4 238 1.96E-92 T 11-10-2018 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Gene3D G3DSA:2.30.40.20 15 72 4.6E-27 T 11-10-2018 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Pfam PF00817 impB/mucB/samB family 11 158 3.3E-48 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Gene3D G3DSA:3.30.70.270 73 173 2.6E-38 T 11-10-2018 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Gene3D G3DSA:3.30.1490.100 241 353 6.3E-26 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 340 2.2E-7 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Gene3D G3DSA:1.10.150.20 174 232 1.9E-15 T 11-10-2018 AL538_05625 92683f95a21f704bc1c2dbeb3dc18d9d 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 37.061 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 Gene3D G3DSA:3.30.70.270 132 277 3.0E-37 T 11-10-2018 AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 SUPERFAMILY SSF55073 140 275 1.65E-31 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 275 2.0E-26 T 11-10-2018 IPR000160 GGDEF domain AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 275 4.7E-25 T 11-10-2018 IPR000160 GGDEF domain AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 SMART SM00267 124 277 1.4E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_09525 10c861c20b8ae9c989bf33edddeac5d6 277 Gene3D G3DSA:3.30.450.20 5 131 2.0E-9 T 11-10-2018 AL538_21615 628f6c0093ab290a9c69079d1898066a 187 Pfam PF13302 Acetyltransferase (GNAT) domain 7 145 4.8E-16 T 11-10-2018 IPR000182 GNAT domain AL538_21615 628f6c0093ab290a9c69079d1898066a 187 Gene3D G3DSA:3.40.630.30 2 176 1.6E-33 T 11-10-2018 AL538_21615 628f6c0093ab290a9c69079d1898066a 187 SUPERFAMILY SSF55729 5 169 3.3E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_04915 f8e7acc5406680609098a4292962ba67 191 Pfam PF04542 Sigma-70 region 2 33 99 2.1E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_04915 f8e7acc5406680609098a4292962ba67 191 Pfam PF08281 Sigma-70, region 4 123 175 4.9E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_04915 f8e7acc5406680609098a4292962ba67 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_04915 f8e7acc5406680609098a4292962ba67 191 Gene3D G3DSA:1.10.1740.10 19 101 7.9E-19 T 11-10-2018 AL538_04915 f8e7acc5406680609098a4292962ba67 191 SUPERFAMILY SSF88659 120 180 4.86E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_04915 f8e7acc5406680609098a4292962ba67 191 Gene3D G3DSA:1.10.10.10 118 181 4.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04915 f8e7acc5406680609098a4292962ba67 191 SUPERFAMILY SSF88946 27 109 5.49E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_04915 f8e7acc5406680609098a4292962ba67 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.9E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_15625 1d495ae1bf0b84506b26b26b236e66cb 259 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 2.2E-120 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL538_15625 1d495ae1bf0b84506b26b26b236e66cb 259 PIRSF PIRSF020736 2 257 2.9E-93 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AL538_15625 1d495ae1bf0b84506b26b26b236e66cb 259 Gene3D G3DSA:1.20.1260.10 7 76 1.9E-16 T 11-10-2018 IPR012347 Ferritin-like AL538_15625 1d495ae1bf0b84506b26b26b236e66cb 259 Gene3D G3DSA:1.20.1260.10 97 259 1.6E-56 T 11-10-2018 IPR012347 Ferritin-like AL538_15625 1d495ae1bf0b84506b26b26b236e66cb 259 SUPERFAMILY SSF47240 11 256 4.87E-75 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_19985 f5402e0e9196e49915a49d0556218c29 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 8.6E-105 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AL538_19985 f5402e0e9196e49915a49d0556218c29 185 Gene3D G3DSA:3.40.30.10 1 184 6.0E-63 T 11-10-2018 AL538_19985 f5402e0e9196e49915a49d0556218c29 185 SUPERFAMILY SSF52833 2 184 4.54E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_19985 f5402e0e9196e49915a49d0556218c29 185 Pfam PF00578 AhpC/TSA family 4 131 3.1E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_19985 f5402e0e9196e49915a49d0556218c29 185 PIRSF PIRSF000239 1 185 1.0E-53 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_19985 f5402e0e9196e49915a49d0556218c29 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 9.0E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 8.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.4E-204 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.382 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Gene3D G3DSA:3.90.550.10 1 224 4.9E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 SUPERFAMILY SSF53448 1 249 3.13E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 SUPERFAMILY SSF51161 252 434 5.94E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 3.9E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_09580 fe992bc2f1a13be95201270126cb1a90 453 Gene3D G3DSA:2.160.10.10 225 453 3.2E-71 T 11-10-2018 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 5.4E-239 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 Gene3D G3DSA:3.40.605.10 24 458 6.8E-141 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 SUPERFAMILY SSF53720 2 484 3.93E-142 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 1.4E-136 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_23670 1ecd85c4e7045e98f9ed235c0e539159 497 Gene3D G3DSA:3.40.309.10 250 450 6.8E-141 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Gene3D G3DSA:3.40.50.80 470 624 6.5E-60 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Pfam PF00175 Oxidoreductase NAD-binding domain 482 588 3.6E-19 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 624 49.037 T 11-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Pfam PF00258 Flavodoxin 90 213 4.1E-29 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 SUPERFAMILY SSF63380 254 470 2.04E-62 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Gene3D G3DSA:1.20.990.10 305 409 1.1E-71 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Gene3D G3DSA:2.40.30.10 258 464 1.1E-71 T 11-10-2018 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 444 453 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 566 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 573 581 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 519 530 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 411 418 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 295 305 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 500 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 506 515 3.3E-29 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 SUPERFAMILY SSF52218 87 234 9.66E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00369 Flavodoxin signature 169 179 9.5E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00369 Flavodoxin signature 89 102 9.5E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00369 Flavodoxin signature 137 148 9.5E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PRINTS PR00369 Flavodoxin signature 193 212 9.5E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 SUPERFAMILY SSF52343 469 624 2.23E-51 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Gene3D G3DSA:3.40.50.360 78 241 2.7E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_07660 d863bf582318ac8d22c08924931a12ea 624 PIRSF PIRSF000207 19 624 1.7E-276 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 Pfam PF00667 FAD binding domain 257 449 1.2E-27 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 AL538_07660 d863bf582318ac8d22c08924931a12ea 624 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 624 1.4E-258 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AL538_09980 21fb987fb7c3aa37297b7d588166e5f0 173 SUPERFAMILY SSF52540 4 162 1.03E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09980 21fb987fb7c3aa37297b7d588166e5f0 173 Pfam PF01202 Shikimate kinase 13 134 1.5E-13 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL538_09980 21fb987fb7c3aa37297b7d588166e5f0 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 2.1E-64 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AL538_09980 21fb987fb7c3aa37297b7d588166e5f0 173 Gene3D G3DSA:3.40.50.300 2 166 9.2E-66 T 11-10-2018 AL538_06490 7150035fa45a605688ed6269dc0377e9 183 Gene3D G3DSA:3.40.80.10 3 183 1.2E-52 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL538_06490 7150035fa45a605688ed6269dc0377e9 183 SUPERFAMILY SSF55846 5 182 1.7E-62 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL538_06490 7150035fa45a605688ed6269dc0377e9 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 1.4E-25 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL538_06490 7150035fa45a605688ed6269dc0377e9 183 SMART SM00644 18 169 5.3E-52 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AL538_06820 488433a55e945117da017ecb41753a35 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.4E-19 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AL538_06820 488433a55e945117da017ecb41753a35 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 6.5E-35 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AL538_06820 488433a55e945117da017ecb41753a35 212 Gene3D G3DSA:1.10.10.880 6 71 7.1E-25 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AL538_06820 488433a55e945117da017ecb41753a35 212 PIRSF PIRSF016938 3 206 8.2E-34 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 AL538_06820 488433a55e945117da017ecb41753a35 212 SUPERFAMILY SSF89069 8 71 3.01E-21 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.6E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.6E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 5.6E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 Pfam PF13411 MerR HTH family regulatory protein 3 70 2.2E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 Gene3D G3DSA:1.10.1660.10 1 131 6.0E-27 T 11-10-2018 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 SMART SM00422 2 71 3.6E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_19585 51b2a6d04107cf4e8d7fd24a3aa0f41d 169 SUPERFAMILY SSF46955 2 104 1.94E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_21800 44f8936fe452273c9de55a0ae81234df 418 Gene3D G3DSA:3.90.170.10 266 418 8.4E-50 T 11-10-2018 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 Gene3D G3DSA:3.40.440.10 6 255 3.7E-72 T 11-10-2018 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 SMART SM00788 3 417 3.8E-173 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 1.4E-129 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 Gene3D G3DSA:1.10.300.10 99 200 3.7E-72 T 11-10-2018 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 140.811 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AL538_21800 44f8936fe452273c9de55a0ae81234df 418 SUPERFAMILY SSF52540 1 417 1.27E-120 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 166 187 6.8E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 PRINTS PR01374 Gram-negative bacterial tonB protein signature 75 85 6.8E-6 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 SUPERFAMILY SSF74653 169 246 3.53E-21 T 11-10-2018 AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 Gene3D G3DSA:3.30.1150.10 141 249 3.0E-21 T 11-10-2018 AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 171 248 1.6E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL538_26550 e34d3f33cb15fa842830c9d472d8d40b 250 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 172 248 4.8E-22 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL538_19150 f3dff14d7d0e91383eb786e64f0e55f0 75 Pfam PF09016 Pas factor saposin fold 1 71 6.1E-26 T 11-10-2018 IPR015106 Pas factor saposin domain AL538_19150 f3dff14d7d0e91383eb786e64f0e55f0 75 Gene3D G3DSA:1.20.1280.100 1 72 8.9E-34 T 11-10-2018 AL538_06780 73e074bfb4e49e4e2e209fd8a0237ce7 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 7.9E-99 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL538_06780 73e074bfb4e49e4e2e209fd8a0237ce7 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.219 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL538_06780 73e074bfb4e49e4e2e209fd8a0237ce7 243 SUPERFAMILY SSF63892 4 241 6.67E-102 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL538_06780 73e074bfb4e49e4e2e209fd8a0237ce7 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.9E-105 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AL538_06780 73e074bfb4e49e4e2e209fd8a0237ce7 243 Gene3D G3DSA:3.20.20.70 1 243 8.9E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Gene3D G3DSA:2.40.50.100 57 189 4.5E-62 T 11-10-2018 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Gene3D G3DSA:2.40.420.20 270 346 4.5E-62 T 11-10-2018 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Gene3D G3DSA:2.40.30.170 44 269 4.5E-62 T 11-10-2018 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Pfam PF13437 HlyD family secretion protein 155 259 1.1E-6 T 11-10-2018 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Pfam PF13533 Biotin-lipoyl like 57 104 2.2E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 8.8E-58 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 Gene3D G3DSA:1.10.287.470 91 149 4.5E-62 T 11-10-2018 AL538_23895 142536f867a6fdc324ed3ecddb7bbce6 353 SUPERFAMILY SSF111369 48 266 4.71E-27 T 11-10-2018 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 SUPERFAMILY SSF49503 121 279 4.38E-48 T 11-10-2018 IPR008972 Cupredoxin AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 220 1.4E-7 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 Pfam PF06481 COX Aromatic Rich Motif 239 283 1.5E-9 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 Gene3D G3DSA:2.60.40.420 113 281 1.1E-53 T 11-10-2018 IPR008972 Cupredoxin AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 239 3.7E-113 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 Gene3D G3DSA:1.10.287.90 27 112 6.8E-34 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 PIRSF PIRSF000292 1 291 1.6E-125 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AL538_23700 4d711f8e46b4a0db235797a6d4d8fb68 293 SUPERFAMILY SSF81464 29 116 1.8E-23 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_24370 92793c7bf3207ae4caee8be24779e377 323 SUPERFAMILY SSF52172 10 160 2.13E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_24370 92793c7bf3207ae4caee8be24779e377 323 Pfam PF00072 Response regulator receiver domain 14 121 6.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24370 92793c7bf3207ae4caee8be24779e377 323 SMART SM00267 144 320 2.4E-55 T 11-10-2018 IPR000160 GGDEF domain AL538_24370 92793c7bf3207ae4caee8be24779e377 323 Gene3D G3DSA:3.30.70.270 144 322 5.9E-54 T 11-10-2018 AL538_24370 92793c7bf3207ae4caee8be24779e377 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 319 5.0E-47 T 11-10-2018 IPR000160 GGDEF domain AL538_24370 92793c7bf3207ae4caee8be24779e377 323 Gene3D G3DSA:3.40.50.2300 1 143 3.9E-33 T 11-10-2018 AL538_24370 92793c7bf3207ae4caee8be24779e377 323 SMART SM00448 12 124 4.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24370 92793c7bf3207ae4caee8be24779e377 323 SUPERFAMILY SSF55073 160 321 9.02E-46 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_24370 92793c7bf3207ae4caee8be24779e377 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 316 3.4E-44 T 11-10-2018 IPR000160 GGDEF domain AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.808 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 4.3E-266 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 SUPERFAMILY SSF53732 1 467 7.32E-166 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 6.8E-160 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 133 148 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 399 412 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 286 300 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 195 208 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 343 354 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 119 132 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 82 95 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 108 116 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 PRINTS PR00415 Aconitase family signature 209 222 9.9E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 Gene3D G3DSA:3.30.499.20 4 286 1.8E-99 T 11-10-2018 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL538_11230 2ac7aefdc1bf35b78731c02237239f81 472 Gene3D G3DSA:3.30.499.10 299 472 2.1E-49 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL538_21395 0cb6bcd071dd497c0f5a80d9306f2bd3 251 SUPERFAMILY SSF160527 132 241 5.36E-6 T 11-10-2018 AL538_21395 0cb6bcd071dd497c0f5a80d9306f2bd3 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 1.6E-27 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL538_08095 db9206dded1dc4502bd54f5b781235c6 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL538_08095 db9206dded1dc4502bd54f5b781235c6 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL538_08095 db9206dded1dc4502bd54f5b781235c6 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 11-10-2018 AL538_08095 db9206dded1dc4502bd54f5b781235c6 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AL538_08095 db9206dded1dc4502bd54f5b781235c6 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 11-10-2018 IPR010920 LSM domain superfamily AL538_23615 eebd866789ef3cd9ebf3ec0273f7f0ed 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 182 5.4E-61 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL538_23615 eebd866789ef3cd9ebf3ec0273f7f0ed 203 SUPERFAMILY SSF46626 16 193 1.18E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_23615 eebd866789ef3cd9ebf3ec0273f7f0ed 203 Gene3D G3DSA:1.10.760.10 40 200 6.7E-62 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 SUPERFAMILY SSF109604 309 495 5.65E-40 T 11-10-2018 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 PIRSF PIRSF001267 1 496 3.2E-177 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 Gene3D G3DSA:3.30.420.40 11 299 5.5E-82 T 11-10-2018 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 Gene3D G3DSA:3.30.420.150 114 291 5.5E-82 T 11-10-2018 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.897 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 SUPERFAMILY SSF53067 134 305 6.95E-43 T 11-10-2018 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.3E-87 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 Gene3D G3DSA:1.10.3210.10 306 496 2.8E-44 T 11-10-2018 AL538_09230 facb224bb9b7a8b875ec48cec92c705d 497 SUPERFAMILY SSF53067 9 129 1.67E-35 T 11-10-2018 AL538_07045 9e4e21f62a25cb1bc736ff9ed71a879b 239 Gene3D G3DSA:3.40.50.150 29 239 7.8E-71 T 11-10-2018 AL538_07045 9e4e21f62a25cb1bc736ff9ed71a879b 239 SUPERFAMILY SSF53335 15 237 1.01E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_07045 9e4e21f62a25cb1bc736ff9ed71a879b 239 Pfam PF02390 Putative methyltransferase 62 232 4.8E-59 T 11-10-2018 AL538_07045 9e4e21f62a25cb1bc736ff9ed71a879b 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.58 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL538_07045 9e4e21f62a25cb1bc736ff9ed71a879b 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 1.6E-68 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 SUPERFAMILY SSF50249 40 124 3.73E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 Gene3D G3DSA:3.40.1260.20 400 508 2.0E-38 T 11-10-2018 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 8.2E-171 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 Hamap MF_00970 Ribonuclease E [rne]. 1 1015 36.158 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 SMART SM00316 37 119 1.1E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 Gene3D G3DSA:2.40.50.140 32 125 4.0E-32 T 11-10-2018 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 Pfam PF10150 Ribonuclease E/G family 121 390 4.5E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL538_03935 439cff9876f26d768f3986a224d59c1e 1028 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_09635 8999a1b48d93974c8d9e5a062ac7ed93 257 Gene3D G3DSA:3.40.50.300 1 255 2.2E-76 T 11-10-2018 AL538_09635 8999a1b48d93974c8d9e5a062ac7ed93 257 SUPERFAMILY SSF52540 2 254 7.83E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09635 8999a1b48d93974c8d9e5a062ac7ed93 257 Pfam PF13614 AAA domain 2 178 7.4E-62 T 11-10-2018 IPR025669 AAA domain AL538_09635 8999a1b48d93974c8d9e5a062ac7ed93 257 PIRSF PIRSF009320 2 71 1.6E-13 T 11-10-2018 AL538_09635 8999a1b48d93974c8d9e5a062ac7ed93 257 PIRSF PIRSF009320 88 251 1.1E-8 T 11-10-2018 AL538_22675 79784ef95b278927f206f4ff349824c1 102 Gene3D G3DSA:3.30.70.920 6 75 8.2E-23 T 11-10-2018 AL538_22675 79784ef95b278927f206f4ff349824c1 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.155 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL538_22675 79784ef95b278927f206f4ff349824c1 102 Pfam PF03927 NapD protein 6 80 5.3E-30 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 3.1E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 SUPERFAMILY SSF46689 2 78 7.7E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 Gene3D G3DSA:1.10.10.60 1 58 2.7E-22 T 11-10-2018 AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 7.8E-10 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 Gene3D G3DSA:1.10.357.10 66 200 2.6E-26 T 11-10-2018 AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20060 398d58f412d520cfa9e00341e583e2d6 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.4E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 Gene3D G3DSA:1.25.40.10 338 458 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 SMART SM00327 84 284 2.8E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 Gene3D G3DSA:3.40.50.410 84 283 4.0E-35 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 Pfam PF13519 von Willebrand factor type A domain 88 193 7.0E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 SUPERFAMILY SSF48452 346 446 1.8E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 SUPERFAMILY SSF53300 87 271 1.3E-20 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_17255 46e08bd4b58eb3f4df78e1686b9c3d28 624 SMART SM00028 397 430 0.0088 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_21425 eb1ab9c4cb838cc9443c21fb422b9ad6 307 SUPERFAMILY SSF103481 41 140 2.35E-9 T 11-10-2018 AL538_21425 eb1ab9c4cb838cc9443c21fb422b9ad6 307 Pfam PF00892 EamA-like transporter family 6 136 2.3E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_21425 eb1ab9c4cb838cc9443c21fb422b9ad6 307 Pfam PF00892 EamA-like transporter family 150 288 3.1E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_21425 eb1ab9c4cb838cc9443c21fb422b9ad6 307 SUPERFAMILY SSF103481 184 288 5.75E-8 T 11-10-2018 AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 Pfam PF01734 Patatin-like phospholipase 44 234 4.1E-30 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 Gene3D G3DSA:3.10.20.310 349 424 1.6E-6 T 11-10-2018 AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 Pfam PF07244 Surface antigen variable number repeat 354 423 1.7E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 SUPERFAMILY SSF52151 38 320 5.49E-58 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 Gene3D G3DSA:3.40.1090.10 147 289 2.6E-18 T 11-10-2018 AL538_06385 8caf543c7781de8a6a30bcf872f2e32a 772 Gene3D G3DSA:3.40.1090.10 27 133 8.6E-29 T 11-10-2018 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Gene3D G3DSA:1.10.1130.10 35 75 4.7E-5 T 11-10-2018 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 SUPERFAMILY SSF48695 38 577 1.49E-74 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Pfam PF13435 Cytochrome c554 and c-prime 176 214 3.7E-4 T 11-10-2018 IPR023155 Cytochrome c-552/4 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Pfam PF13435 Cytochrome c554 and c-prime 43 70 0.011 T 11-10-2018 IPR023155 Cytochrome c-552/4 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 SUPERFAMILY SSF48452 584 700 6.21E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 SMART SM00028 620 653 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 SMART SM00028 586 619 6.3E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Gene3D G3DSA:1.10.1130.10 152 353 3.3E-20 T 11-10-2018 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Pfam PF13414 TPR repeat 594 634 1.8E-8 T 11-10-2018 AL538_23085 dd9a0a2c345b88b8becbf331ee14e112 768 Gene3D G3DSA:1.25.40.10 563 753 1.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.3E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.6E-244 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF51246 331 444 8.37E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 SMART SM00878 336 441 1.1E-63 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.2E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.9E-84 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF52440 1 113 7.91E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 SUPERFAMILY SSF56059 83 346 1.2E-71 T 11-10-2018 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.40.50.20 1 85 8.3E-34 T 11-10-2018 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.1490.20 131 203 1.8E-157 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_08480 bef79ba9fd0ded6089a3cab637a9a6e6 447 Gene3D G3DSA:3.30.470.20 86 433 1.8E-157 T 11-10-2018 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 Gene3D G3DSA:2.40.160.10 44 374 5.4E-41 T 11-10-2018 IPR023614 Porin domain superfamily AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 SUPERFAMILY SSF56935 44 374 5.19E-40 T 11-10-2018 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 Pfam PF13609 Gram-negative porin 10 343 2.9E-33 T 11-10-2018 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 5.7E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 366 374 5.7E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 5.7E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 5.7E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_13355 9d775382d7edbe60a2e021a1ab5c96ca 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 5.7E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 SMART SM00420 4 56 5.7E-20 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 2.3E-41 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 Gene3D G3DSA:1.10.10.10 1 52 7.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 SUPERFAMILY SSF46785 2 59 2.62E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 SUPERFAMILY SSF100950 70 227 1.47E-24 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 SMART SM01134 67 227 1.9E-47 T 11-10-2018 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AL538_17680 f26090551a4c4617875e59483f7ac4ef 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AL538_19925 ab3dee15afe534ca3ef11d2d28dcf4f4 462 SUPERFAMILY SSF56935 53 462 1.73E-83 T 11-10-2018 AL538_19925 ab3dee15afe534ca3ef11d2d28dcf4f4 462 Gene3D G3DSA:2.40.170.10 71 462 7.7E-39 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AL538_19925 ab3dee15afe534ca3ef11d2d28dcf4f4 462 Pfam PF02264 LamB porin 91 462 6.5E-41 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_19925 ab3dee15afe534ca3ef11d2d28dcf4f4 462 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 115 456 2.0E-115 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_14855 89335ed0325539cbfaefc7506925163c 248 Pfam PF04288 MukE-like family 17 242 3.7E-118 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL538_14855 89335ed0325539cbfaefc7506925163c 248 Gene3D G3DSA:1.10.10.2260 95 201 4.4E-49 T 11-10-2018 AL538_14855 89335ed0325539cbfaefc7506925163c 248 Gene3D G3DSA:1.10.10.2250 8 85 4.6E-34 T 11-10-2018 AL538_14855 89335ed0325539cbfaefc7506925163c 248 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 245 49.593 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.4E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.467 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 PIRSF PIRSF002181 1 142 1.4E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 Pfam PF00572 Ribosomal protein L13 15 138 3.6E-57 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 SUPERFAMILY SSF52161 1 140 1.15E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_11535 0d3dbe248aebd3fd2ece23f0bec281f0 142 Gene3D G3DSA:3.90.1180.10 1 142 4.8E-64 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 Gene3D G3DSA:3.40.800.10 5 336 1.4E-127 T 11-10-2018 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 PRINTS PR00116 Arginase signature 125 140 3.8E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 PRINTS PR00116 Arginase signature 252 281 3.8E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 Pfam PF00491 Arginase family 47 325 1.1E-59 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 PIRSF PIRSF036979 26 333 1.9E-25 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 5.2E-114 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.765 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL538_02155 4c2c17f177c607d260efa2c82f00e60a 337 SUPERFAMILY SSF52768 13 332 4.68E-82 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL538_14090 33bec0fe848cf8bbfc9a7b6e989ef723 186 Pfam PF04279 Intracellular septation protein A 1 159 2.3E-6 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 PRINTS PR00313 NodO calcium binding signature 109 118 1.8E-12 T 11-10-2018 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 PRINTS PR00313 NodO calcium binding signature 43 54 1.8E-12 T 11-10-2018 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 PRINTS PR00313 NodO calcium binding signature 73 81 1.8E-12 T 11-10-2018 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 PRINTS PR00313 NodO calcium binding signature 55 63 1.8E-12 T 11-10-2018 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Gene3D G3DSA:2.150.10.10 66 189 6.0E-19 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 SUPERFAMILY SSF51120 12 173 4.08E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 60 78 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 101 115 0.064 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 21 34 1.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 62 5.0E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 64 80 0.041 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 82 98 0.78 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_17210 386e50e9ff7dada5ac4c023c856251dd 193 Gene3D G3DSA:2.150.10.10 18 65 1.1E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_26975 1131b98d1f920b981dd815c055d2797e 307 SUPERFAMILY SSF46785 3 80 4.83E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26975 1131b98d1f920b981dd815c055d2797e 307 Gene3D G3DSA:1.10.10.10 1 85 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26975 1131b98d1f920b981dd815c055d2797e 307 SUPERFAMILY SSF53850 88 296 3.98E-36 T 11-10-2018 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 Gene3D G3DSA:3.40.190.10 88 295 5.4E-47 T 11-10-2018 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 Pfam PF03466 LysR substrate binding domain 96 296 8.8E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26975 1131b98d1f920b981dd815c055d2797e 307 Gene3D G3DSA:3.40.190.10 169 271 5.4E-47 T 11-10-2018 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26975 1131b98d1f920b981dd815c055d2797e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25800 61eec15ce3e23e2d2c526cfe6d094228 172 Gene3D G3DSA:3.30.160.670 13 171 8.9E-26 T 11-10-2018 AL538_25800 61eec15ce3e23e2d2c526cfe6d094228 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 2.5E-26 T 11-10-2018 IPR025411 Domain of unknown function DUF4136 AL538_14195 0ef5112b4829cf16e2f0799981090338 220 Pfam PF02080 TrkA-C domain 154 215 2.9E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_14195 0ef5112b4829cf16e2f0799981090338 220 Pfam PF02254 TrkA-N domain 8 123 3.6E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_14195 0ef5112b4829cf16e2f0799981090338 220 Gene3D G3DSA:3.40.50.720 2 140 8.2E-35 T 11-10-2018 AL538_14195 0ef5112b4829cf16e2f0799981090338 220 SUPERFAMILY SSF51735 6 136 1.58E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_14195 0ef5112b4829cf16e2f0799981090338 220 SUPERFAMILY SSF116726 134 215 1.31E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_14195 0ef5112b4829cf16e2f0799981090338 220 Gene3D G3DSA:3.30.70.1450 141 216 5.7E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_04665 0dda40940887b32e97ddf1b8aad1fd37 294 SUPERFAMILY SSF74650 8 289 1.76E-74 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_04665 0dda40940887b32e97ddf1b8aad1fd37 294 Gene3D G3DSA:2.70.98.10 2 293 1.9E-86 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_04665 0dda40940887b32e97ddf1b8aad1fd37 294 PIRSF PIRSF016020 4 294 3.1E-64 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AL538_04665 0dda40940887b32e97ddf1b8aad1fd37 294 Pfam PF01263 Aldose 1-epimerase 27 291 3.4E-49 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL538_18815 6e046526d1e05479472919d85637a0f5 364 Gene3D G3DSA:2.40.50.140 283 346 1.5E-13 T 11-10-2018 AL538_18815 6e046526d1e05479472919d85637a0f5 364 Gene3D G3DSA:3.40.50.300 1 238 5.9E-78 T 11-10-2018 AL538_18815 6e046526d1e05479472919d85637a0f5 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_18815 6e046526d1e05479472919d85637a0f5 364 SMART SM00382 28 210 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_18815 6e046526d1e05479472919d85637a0f5 364 SUPERFAMILY SSF52540 4 242 7.6E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18815 6e046526d1e05479472919d85637a0f5 364 SUPERFAMILY SSF50331 237 359 1.51E-15 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_18815 6e046526d1e05479472919d85637a0f5 364 Gene3D G3DSA:2.40.50.100 239 359 1.5E-13 T 11-10-2018 AL538_18815 6e046526d1e05479472919d85637a0f5 364 Pfam PF00005 ABC transporter 20 161 5.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22185 f7957672da2a0f07fa11ce17fa8b8522 437 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 284 312 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_22185 f7957672da2a0f07fa11ce17fa8b8522 437 Gene3D G3DSA:1.10.530.10 248 429 1.5E-55 T 11-10-2018 AL538_22185 f7957672da2a0f07fa11ce17fa8b8522 437 SUPERFAMILY SSF53955 257 430 3.1E-37 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_22185 f7957672da2a0f07fa11ce17fa8b8522 437 Pfam PF11873 Domain of unknown function (DUF3393) 33 113 1.8E-5 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AL538_22185 f7957672da2a0f07fa11ce17fa8b8522 437 Pfam PF01464 Transglycosylase SLT domain 266 388 8.8E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 Gene3D G3DSA:3.30.70.360 209 319 3.5E-173 T 11-10-2018 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 Gene3D G3DSA:3.40.630.10 4 400 3.5E-173 T 11-10-2018 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.514 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 PIRSF PIRSF037215 1 408 2.8E-182 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 SUPERFAMILY SSF55031 209 320 5.58E-38 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 5.0E-160 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 1.4E-13 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 Pfam PF07687 Peptidase dimerisation domain 206 303 8.5E-8 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_22705 8366bfdefafac529cb17e898ff3e62f7 409 SUPERFAMILY SSF53187 1 406 2.51E-80 T 11-10-2018 AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SUPERFAMILY SSF81901 76 281 1.24E-28 T 11-10-2018 AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 Pfam PF08238 Sel1 repeat 137 169 0.1 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 Pfam PF08238 Sel1 repeat 212 242 5.0E-6 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 Pfam PF08238 Sel1 repeat 79 97 0.07 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 Pfam PF08238 Sel1 repeat 194 206 38.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 Gene3D G3DSA:1.25.40.10 19 318 6.6E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SMART SM00671 171 206 59.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SMART SM00671 135 170 1.1 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SMART SM00671 207 242 2.8E-5 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SMART SM00671 65 97 190.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_18490 438cdc5d159a6eee0b2ca55475eb0a13 401 SMART SM00671 243 276 300.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_05320 f3c5691f34e227c3aabe0f2e89a7881e 191 SUPERFAMILY SSF53697 1 189 2.83E-51 T 11-10-2018 AL538_05320 f3c5691f34e227c3aabe0f2e89a7881e 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 6.4E-81 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL538_05320 f3c5691f34e227c3aabe0f2e89a7881e 191 Pfam PF13580 SIS domain 12 146 9.5E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_05320 f3c5691f34e227c3aabe0f2e89a7881e 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.592 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL538_05320 f3c5691f34e227c3aabe0f2e89a7881e 191 Gene3D G3DSA:3.40.50.10490 1 191 4.4E-70 T 11-10-2018 AL538_27685 07b52994f9f80f57cac9de368c1998f5 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.7E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_02320 a53e346fa1d5762eb1968e3a5695553e 122 Pfam PF09961 Uncharacterized protein conserved in bacteria (DUF2195) 22 77 5.3E-11 T 11-10-2018 IPR018696 Protein of unknown function DUF2195 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 SUPERFAMILY SSF52540 303 527 1.52E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 Pfam PF00005 ABC transporter 22 191 8.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 SMART SM00382 348 518 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 SMART SM00382 31 236 7.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 SUPERFAMILY SSF52540 9 242 6.57E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 Pfam PF00005 ABC transporter 340 473 9.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 Gene3D G3DSA:3.40.50.300 1 285 9.0E-87 T 11-10-2018 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 Gene3D G3DSA:3.40.50.300 286 555 2.3E-76 T 11-10-2018 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 5.2E-293 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AL538_12075 ae797928a4ffcefbce6a25b9840061b6 555 Pfam PF12848 ABC transporter 230 306 2.7E-13 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_16475 dcb5cb643004cff44691dbf67d836465 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 1.2E-50 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_16475 dcb5cb643004cff44691dbf67d836465 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 5.8E-79 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_16475 dcb5cb643004cff44691dbf67d836465 472 PIRSF PIRSF002457 1 472 1.8E-119 T 11-10-2018 IPR030676 Citrate carrier CitT-related AL538_11155 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11155 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11155 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11155 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.8E-40 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_11155 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_22485 edc553205721723f469f3aea105b1bbf 440 SMART SM00388 222 286 1.1E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22485 edc553205721723f469f3aea105b1bbf 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_22485 edc553205721723f469f3aea105b1bbf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 6.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22485 edc553205721723f469f3aea105b1bbf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 6.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22485 edc553205721723f469f3aea105b1bbf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22485 edc553205721723f469f3aea105b1bbf 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 6.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_22485 edc553205721723f469f3aea105b1bbf 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 2.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_22485 edc553205721723f469f3aea105b1bbf 440 SUPERFAMILY SSF47384 206 284 1.79E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_22485 edc553205721723f469f3aea105b1bbf 440 Gene3D G3DSA:3.30.565.10 305 439 2.5E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22485 edc553205721723f469f3aea105b1bbf 440 SMART SM00304 168 221 5.5E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_22485 edc553205721723f469f3aea105b1bbf 440 SUPERFAMILY SSF55874 299 438 4.19E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_22485 edc553205721723f469f3aea105b1bbf 440 Gene3D G3DSA:1.10.287.130 172 287 5.9E-19 T 11-10-2018 AL538_22485 edc553205721723f469f3aea105b1bbf 440 SMART SM00387 330 440 1.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_24375 520f31b91ee747d4d7a3974d8efbbdba 145 SUPERFAMILY SSF158675 1 144 8.37E-52 T 11-10-2018 IPR023132 Sama2622-like superfamily AL538_24375 520f31b91ee747d4d7a3974d8efbbdba 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 1.5E-52 T 11-10-2018 IPR021422 Protein of unknown function DUF3069 AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 2.2E-108 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 Gene3D G3DSA:3.40.50.300 6 174 2.1E-43 T 11-10-2018 AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 PIRSF PIRSF006230 2 280 1.7E-105 T 11-10-2018 IPR016478 GTPase, MTG1 AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 SUPERFAMILY SSF52540 12 186 7.02E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 Pfam PF01926 50S ribosome-binding GTPase 120 185 4.0E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_23280 03f13947fc0e7d22ef1580253e4fa1da 314 Gene3D G3DSA:1.10.1580.10 177 268 5.6E-29 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AL538_18410 d3508b6562813317a2efb86e25972e6f 391 SUPERFAMILY SSF55347 148 316 2.49E-33 T 11-10-2018 AL538_18410 d3508b6562813317a2efb86e25972e6f 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 276 3.2E-12 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AL538_18410 d3508b6562813317a2efb86e25972e6f 391 Gene3D G3DSA:3.30.360.10 147 388 1.5E-125 T 11-10-2018 AL538_18410 d3508b6562813317a2efb86e25972e6f 391 Gene3D G3DSA:3.40.50.720 17 363 1.5E-125 T 11-10-2018 AL538_18410 d3508b6562813317a2efb86e25972e6f 391 SUPERFAMILY SSF51735 9 173 1.64E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_18410 d3508b6562813317a2efb86e25972e6f 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 142 3.5E-27 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.914 T 11-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 11-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 SUPERFAMILY SSF53383 2 464 1.84E-145 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 PIRSF PIRSF001386 1 466 5.6E-229 T 11-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 Gene3D G3DSA:3.90.1150.10 6 460 2.1E-209 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 Gene3D G3DSA:3.40.640.10 58 326 2.1E-209 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_20685 d562d72ba1d6031258ed4f1895aad20f 466 Pfam PF01212 Beta-eliminating lyase 46 431 6.6E-99 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL538_18040 742156917587bfcec52b19e201b0e870 292 SUPERFAMILY SSF55620 153 291 8.34E-22 T 11-10-2018 AL538_18040 742156917587bfcec52b19e201b0e870 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 141 1.3E-9 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL538_18040 742156917587bfcec52b19e201b0e870 292 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 150 283 3.3E-7 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 AL538_18040 742156917587bfcec52b19e201b0e870 292 SUPERFAMILY SSF55620 3 154 2.28E-31 T 11-10-2018 AL538_18040 742156917587bfcec52b19e201b0e870 292 Gene3D G3DSA:3.30.479.10 12 153 5.1E-25 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 Pfam PF03466 LysR substrate binding domain 88 286 5.0E-40 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 SUPERFAMILY SSF53850 89 287 3.26E-38 T 11-10-2018 AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 Gene3D G3DSA:3.40.190.290 90 290 1.8E-71 T 11-10-2018 AL538_04800 755dc8030f73a94f5b2dfbd4e7a06f77 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 ProSitePatterns PS01087 Radical activating enzymes signature. 34 55 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 Gene3D G3DSA:3.20.20.70 19 289 2.2E-72 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 Pfam PF04055 Radical SAM superfamily 40 221 1.7E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 82 282 4.6E-55 T 11-10-2018 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 Pfam PF13353 4Fe-4S single cluster domain 33 161 6.6E-13 T 11-10-2018 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 SUPERFAMILY SSF102114 42 256 9.42E-14 T 11-10-2018 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 PIRSF PIRSF000371 13 81 8.1E-28 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_15010 2c7a9a6488cd1f11b50717028efcf894 291 PIRSF PIRSF000371 69 291 1.3E-63 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 AL538_04415 99a42ed62b1c30af40451b1e28edfc85 848 Gene3D G3DSA:3.30.565.10 355 586 4.0E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_04415 99a42ed62b1c30af40451b1e28edfc85 848 SUPERFAMILY SSF55874 369 542 1.31E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_04415 99a42ed62b1c30af40451b1e28edfc85 848 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 489 7.3E-7 T 11-10-2018 AL538_04415 99a42ed62b1c30af40451b1e28edfc85 848 PRINTS PR00775 90kDa heat shock protein signature 464 486 1.3E-11 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_04415 99a42ed62b1c30af40451b1e28edfc85 848 PRINTS PR00775 90kDa heat shock protein signature 374 396 1.3E-11 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_11320 8995593a93aa17429443287fcc34d75b 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 5.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_11320 8995593a93aa17429443287fcc34d75b 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11320 8995593a93aa17429443287fcc34d75b 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11320 8995593a93aa17429443287fcc34d75b 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11320 8995593a93aa17429443287fcc34d75b 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 3.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_11320 8995593a93aa17429443287fcc34d75b 464 SMART SM00388 230 296 2.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_11320 8995593a93aa17429443287fcc34d75b 464 SUPERFAMILY SSF55874 285 449 8.64E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_11320 8995593a93aa17429443287fcc34d75b 464 SMART SM00387 339 451 3.1E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11320 8995593a93aa17429443287fcc34d75b 464 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 448 5.6E-113 T 11-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AL538_11320 8995593a93aa17429443287fcc34d75b 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 449 9.8E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_11320 8995593a93aa17429443287fcc34d75b 464 Gene3D G3DSA:1.10.287.130 180 297 1.1E-20 T 11-10-2018 AL538_11320 8995593a93aa17429443287fcc34d75b 464 SMART SM00304 176 229 9.8E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_11320 8995593a93aa17429443287fcc34d75b 464 SUPERFAMILY SSF47384 213 295 5.69E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_11320 8995593a93aa17429443287fcc34d75b 464 Gene3D G3DSA:3.30.565.10 298 453 1.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_08935 346367a38bfb68dafd299012f37624df 449 Pfam PF01554 MatE 26 186 2.1E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_08935 346367a38bfb68dafd299012f37624df 449 Pfam PF01554 MatE 253 401 2.5E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_08935 346367a38bfb68dafd299012f37624df 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 420 5.8E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 SUPERFAMILY SSF46785 4 84 8.16E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 Gene3D G3DSA:1.10.10.10 3 90 8.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 Gene3D G3DSA:3.40.190.290 91 290 1.3E-56 T 11-10-2018 AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 Pfam PF03466 LysR substrate binding domain 89 289 4.3E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_16620 e84e5631166afcadd8fe83126fd554c3 292 SUPERFAMILY SSF53850 89 291 1.05E-37 T 11-10-2018 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.842 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 SUPERFAMILY SSF52440 2 110 7.91E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 SUPERFAMILY SSF56059 111 313 2.3E-57 T 11-10-2018 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 Gene3D G3DSA:3.30.1490.20 121 194 2.6E-33 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 SUPERFAMILY SSF51246 317 389 4.71E-17 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 7.6E-190 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 Gene3D G3DSA:3.40.50.20 1 120 1.1E-53 T 11-10-2018 AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 Pfam PF02222 ATP-grasp domain 121 293 2.3E-58 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL538_02000 a54b9f10a184ef3dd1df416b62eb0a2a 391 Gene3D G3DSA:3.30.470.20 195 389 8.7E-61 T 11-10-2018 AL538_09030 be824731a4086e2fa8c371586c061717 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 2.1E-23 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 AL538_09030 be824731a4086e2fa8c371586c061717 109 Gene3D G3DSA:2.40.50.660 32 108 7.4E-8 T 11-10-2018 AL538_15055 88d7edabbbe7487d94c442c0d93594b3 347 SUPERFAMILY SSF81324 3 132 7.06E-18 T 11-10-2018 AL538_15055 88d7edabbbe7487d94c442c0d93594b3 347 SUPERFAMILY SSF51735 121 238 3.25E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15055 88d7edabbbe7487d94c442c0d93594b3 347 Gene3D G3DSA:1.10.287.70 2 104 3.8E-13 T 11-10-2018 AL538_15055 88d7edabbbe7487d94c442c0d93594b3 347 Gene3D G3DSA:3.40.50.720 112 233 2.1E-11 T 11-10-2018 AL538_15055 88d7edabbbe7487d94c442c0d93594b3 347 Pfam PF07885 Ion channel 29 99 2.4E-14 T 11-10-2018 IPR013099 Potassium channel domain AL538_19165 ee4e024b0a1b37009f9ef5d0a274e665 253 SUPERFAMILY SSF52540 17 224 3.9E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19165 ee4e024b0a1b37009f9ef5d0a274e665 253 Pfam PF00005 ABC transporter 20 166 2.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_19165 ee4e024b0a1b37009f9ef5d0a274e665 253 Gene3D G3DSA:3.40.50.300 2 241 6.2E-59 T 11-10-2018 AL538_19165 ee4e024b0a1b37009f9ef5d0a274e665 253 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_19165 ee4e024b0a1b37009f9ef5d0a274e665 253 SMART SM00382 28 211 5.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.2090.10 715 802 1.6E-253 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.2090.10 173 265 1.6E-253 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82714 724 796 7.72E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82693 136 317 1.26E-7 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82866 286 480 1.44E-34 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:1.20.1640.10 8 499 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.0E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 PRINTS PR00702 Acriflavin resistance protein family signature 378 402 4.0E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 4.0E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.0E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 PRINTS PR00702 Acriflavin resistance protein family signature 431 454 4.0E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.70.1320 131 318 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.70.1430 38 810 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.70.1440 668 859 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:1.20.1640.10 500 1019 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82714 177 259 2.09E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82693 38 131 9.42E-18 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Gene3D G3DSA:3.30.70.1430 557 667 1.6E-253 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 SUPERFAMILY SSF82866 798 1022 2.22E-46 T 11-10-2018 AL538_21650 97c52d5b20f87e7bd947f4fce836c7b7 1033 Pfam PF00873 AcrB/AcrD/AcrF family 1 1021 2.3E-159 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_01770 e44a5280958e4bd5f18aedcd7400772e 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 271 4.2E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_01770 e44a5280958e4bd5f18aedcd7400772e 282 Gene3D G3DSA:1.10.3720.10 13 278 2.3E-51 T 11-10-2018 IPR035906 MetI-like superfamily AL538_01770 e44a5280958e4bd5f18aedcd7400772e 282 SUPERFAMILY SSF161098 10 279 1.31E-57 T 11-10-2018 IPR035906 MetI-like superfamily AL538_23690 935392bed955a01dad4ef366e3ddae05 301 PIRSF PIRSF000103 1 301 2.1E-75 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 9.2E-30 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 SUPERFAMILY SSF48179 168 298 1.13E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 SUPERFAMILY SSF51735 3 167 4.93E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_23690 935392bed955a01dad4ef366e3ddae05 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 3.7E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 4.7E-118 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 Gene3D G3DSA:1.10.1040.10 169 301 5.0E-43 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_23690 935392bed955a01dad4ef366e3ddae05 301 Gene3D G3DSA:3.40.50.720 1 167 8.5E-51 T 11-10-2018 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 SUPERFAMILY SSF53955 43 256 7.31E-78 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 Gene3D G3DSA:1.10.3810.10 48 242 5.1E-78 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 Pfam PF17092 Penicillin-binding protein OB-like domain 317 435 9.8E-32 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 Pfam PF00912 Transglycosylase 55 229 2.6E-63 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 787 2.4E-166 T 11-10-2018 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 SUPERFAMILY SSF56601 211 837 1.25E-111 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 Gene3D G3DSA:2.40.50.140 317 431 7.2E-33 T 11-10-2018 AL538_07790 aa94c7a9fbd810d9490c41877d5b098a 856 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 617 4.3E-21 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 Gene3D G3DSA:3.30.479.30 47 178 1.6E-48 T 11-10-2018 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 SMART SM00244 19 176 4.3E-64 T 11-10-2018 IPR001107 Band 7 domain AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 SUPERFAMILY SSF117892 50 183 5.49E-43 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 Pfam PF01145 SPFH domain / Band 7 family 24 192 2.5E-35 T 11-10-2018 IPR001107 Band 7 domain AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 26 48 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 108 125 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 128 151 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 73 94 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 152 170 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 171 192 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_25860 246095d389b5909f87cfaa54b2d4d63d 263 PRINTS PR00721 Stomatin signature 196 219 3.1E-63 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 290 5.2E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 Gene3D G3DSA:2.40.50.100 62 206 1.7E-107 T 11-10-2018 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 Gene3D G3DSA:2.40.420.20 301 370 1.7E-107 T 11-10-2018 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 SUPERFAMILY SSF111369 50 297 7.98E-80 T 11-10-2018 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 372 3.5E-83 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 Gene3D G3DSA:2.40.30.170 50 300 1.7E-107 T 11-10-2018 AL538_15440 294caa2c4eb595d8c2d377d93862b0b2 378 Gene3D G3DSA:1.10.287.470 97 170 1.7E-107 T 11-10-2018 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 PIRSF PIRSF002599 1 69 1.5E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 SMART SM00357 6 69 6.3E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 SUPERFAMILY SSF50249 4 68 9.55E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.6E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site AL538_22795 fb5c78690554d4610ead4d796b5360d9 69 Gene3D G3DSA:2.40.50.140 4 68 6.2E-30 T 11-10-2018 AL538_10765 437165c34706af2a87a56695922cfa83 204 Gene3D G3DSA:1.10.10.10 2 85 8.9E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10765 437165c34706af2a87a56695922cfa83 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 4.7E-6 T 11-10-2018 AL538_10765 437165c34706af2a87a56695922cfa83 204 SUPERFAMILY SSF46785 5 183 9.67E-37 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15705 eb5b69a35c0b6c5037d5eeafa6cec86f 273 Gene3D G3DSA:3.40.50.150 12 273 5.4E-41 T 11-10-2018 AL538_15705 eb5b69a35c0b6c5037d5eeafa6cec86f 273 SUPERFAMILY SSF53335 25 210 7.3E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_15705 eb5b69a35c0b6c5037d5eeafa6cec86f 273 Pfam PF08241 Methyltransferase domain 63 153 8.6E-26 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_15705 eb5b69a35c0b6c5037d5eeafa6cec86f 273 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 19 273 32.252 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AL538_15705 eb5b69a35c0b6c5037d5eeafa6cec86f 273 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 27 273 8.6E-68 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 AL538_21430 011fc6b278de1c14f357b72abc67afef 146 Gene3D G3DSA:3.30.530.20 1 146 1.7E-15 T 11-10-2018 IPR023393 START-like domain superfamily AL538_21430 011fc6b278de1c14f357b72abc67afef 146 SUPERFAMILY SSF55961 2 145 1.5E-17 T 11-10-2018 AL538_10550 456c0881f698f58e8a31b73994084e68 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 164 34.712 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 SUPERFAMILY SSF52374 8 162 2.49E-44 T 11-10-2018 AL538_10550 456c0881f698f58e8a31b73994084e68 167 Pfam PF01467 Cytidylyltransferase-like 11 139 3.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_10550 456c0881f698f58e8a31b73994084e68 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 162 7.3E-59 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 Gene3D G3DSA:3.40.50.620 8 167 3.6E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_10550 456c0881f698f58e8a31b73994084e68 167 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 17 100 0.001 T 11-10-2018 AL538_10550 456c0881f698f58e8a31b73994084e68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 1.0E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.0E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.0E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 1.0E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 55 79 1.0E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AL538_10550 456c0881f698f58e8a31b73994084e68 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 67 1.8E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AL538_23290 93b917dac5471d3dbbd282983f7c8e52 3532 SMART SM00564 3235 3266 30.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_23290 93b917dac5471d3dbbd282983f7c8e52 3532 SMART SM00564 2838 2870 48.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_23290 93b917dac5471d3dbbd282983f7c8e52 3532 SMART SM00564 2640 2673 79.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_23290 93b917dac5471d3dbbd282983f7c8e52 3532 SMART SM00564 3037 3068 37.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_09105 069cd906d42897f4d29827ba87ace6a6 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 200 7.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_09105 069cd906d42897f4d29827ba87ace6a6 238 Gene3D G3DSA:3.40.50.1000 11 231 6.2E-59 T 11-10-2018 IPR023214 HAD superfamily AL538_09105 069cd906d42897f4d29827ba87ace6a6 238 SUPERFAMILY SSF56784 10 238 2.99E-39 T 11-10-2018 IPR036412 HAD-like superfamily AL538_09105 069cd906d42897f4d29827ba87ace6a6 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.2E-13 T 11-10-2018 AL538_09105 069cd906d42897f4d29827ba87ace6a6 238 Gene3D G3DSA:1.20.120.1600 24 110 6.2E-59 T 11-10-2018 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 Gene3D G3DSA:1.25.40.10 21 357 5.4E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 SUPERFAMILY SSF81901 39 270 2.3E-20 T 11-10-2018 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.025 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 SMART SM00028 141 174 460.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 SMART SM00028 216 249 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 SMART SM00028 69 102 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 SMART SM00028 182 215 0.042 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.873 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AL538_03750 8a467b15726b64d70d224d7cb86646ba 391 Pfam PF14559 Tetratricopeptide repeat 194 248 3.8E-6 T 11-10-2018 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 SUPERFAMILY SSF52540 4 191 2.05E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 Pfam PF07670 Nucleoside recognition 509 691 1.2E-36 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 4.2E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 Gene3D G3DSA:3.40.50.300 4 198 8.8E-44 T 11-10-2018 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.8E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.8E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 Pfam PF02421 Ferrous iron transport protein B 4 161 8.2E-59 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 4.9E-181 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AL538_13805 30d5160e3429500fe1b5dada69fb1835 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AL538_12725 17c507044afa6929bf1b66010c275a10 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 9.8E-116 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.1E-36 T 11-10-2018 AL538_12725 17c507044afa6929bf1b66010c275a10 424 Gene3D G3DSA:1.10.3860.10 1 422 3.3E-113 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_12725 17c507044afa6929bf1b66010c275a10 424 SUPERFAMILY SSF118215 5 406 1.83E-104 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 Gene3D G3DSA:1.10.287.130 283 340 1.4E-17 T 11-10-2018 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 SMART SM00388 276 343 5.0E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 SMART SM00387 381 479 4.2E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 SUPERFAMILY SSF47384 271 340 6.47E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 SUPERFAMILY SSF55874 347 479 7.73E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 Gene3D G3DSA:3.30.565.10 341 476 1.4E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 9.4E-112 T 11-10-2018 IPR021821 Protein of unknown function DUF3404 AL538_24330 464e697aa2ceabaf7c4ed6ffc8bc2363 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 4.0E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 11-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 11-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PIRSF PIRSF015592 1 210 1.5E-82 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.933 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.8E-46 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.8E-46 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.8E-46 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 2.8E-46 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.8E-46 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 3.6E-74 T 11-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 Gene3D G3DSA:3.40.630.20 1 212 9.0E-78 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 9.8E-78 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 AL538_25650 56832a6b9d499eeee7c905e920e3a018 212 SUPERFAMILY SSF53182 1 211 6.28E-72 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 Gene3D G3DSA:3.40.190.10 41 523 8.1E-182 T 11-10-2018 AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 PIRSF PIRSF002741 1 541 5.1E-114 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 SUPERFAMILY SSF53850 36 533 1.03E-140 T 11-10-2018 AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 1.6E-85 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 Gene3D G3DSA:3.90.76.10 71 194 8.1E-182 T 11-10-2018 AL538_19510 fd8275106e2fd4385ccabcd1ea6c35dd 541 Gene3D G3DSA:3.10.105.10 296 511 8.1E-182 T 11-10-2018 AL538_23540 055929cd8fa5a2c031252c629698ac06 384 SUPERFAMILY SSF141868 144 381 2.35E-71 T 11-10-2018 IPR035919 EAL domain superfamily AL538_23540 055929cd8fa5a2c031252c629698ac06 384 Gene3D G3DSA:3.20.20.450 137 382 6.4E-75 T 11-10-2018 IPR035919 EAL domain superfamily AL538_23540 055929cd8fa5a2c031252c629698ac06 384 Pfam PF00563 EAL domain 147 374 5.2E-65 T 11-10-2018 IPR001633 EAL domain AL538_23540 055929cd8fa5a2c031252c629698ac06 384 SMART SM00448 5 121 2.0E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23540 055929cd8fa5a2c031252c629698ac06 384 Pfam PF00072 Response regulator receiver domain 8 121 1.9E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23540 055929cd8fa5a2c031252c629698ac06 384 SUPERFAMILY SSF52172 3 124 2.28E-21 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23540 055929cd8fa5a2c031252c629698ac06 384 Gene3D G3DSA:3.40.50.2300 6 128 1.0E-21 T 11-10-2018 AL538_23540 055929cd8fa5a2c031252c629698ac06 384 SMART SM00052 137 379 1.1E-64 T 11-10-2018 IPR001633 EAL domain AL538_24350 3bf5454feb030647d9e7d6cd74bd61bc 122 Pfam PF10719 Late competence development protein ComFB 8 85 3.8E-16 T 11-10-2018 IPR019657 Late competence development protein ComFB AL538_18525 f8788e2afdb9c648fba99fb428e90a52 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 6.4E-64 T 11-10-2018 IPR010323 Protein of unknown function DUF924 AL538_18525 f8788e2afdb9c648fba99fb428e90a52 178 Gene3D G3DSA:1.20.58.320 1 77 1.1E-26 T 11-10-2018 AL538_18525 f8788e2afdb9c648fba99fb428e90a52 178 SUPERFAMILY SSF48452 2 174 5.69E-68 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_18525 f8788e2afdb9c648fba99fb428e90a52 178 Gene3D G3DSA:1.25.40.10 78 178 5.4E-33 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_15500 61451c79f9b024a9106828c5adc180af 238 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 19 238 4.7E-28 T 11-10-2018 IPR009331 Oligogalacturonate-specific porin AL538_15500 61451c79f9b024a9106828c5adc180af 238 Gene3D G3DSA:2.40.160.40 23 238 2.0E-57 T 11-10-2018 AL538_05850 136c826ebef573f51b43df20f7ba9b2d 370 Pfam PF01464 Transglycosylase SLT domain 203 329 2.7E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_05850 136c826ebef573f51b43df20f7ba9b2d 370 SUPERFAMILY SSF53955 180 364 8.45E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_05850 136c826ebef573f51b43df20f7ba9b2d 370 Gene3D G3DSA:1.10.530.10 183 361 8.7E-49 T 11-10-2018 AL538_05850 136c826ebef573f51b43df20f7ba9b2d 370 Pfam PF11873 Domain of unknown function (DUF3393) 38 198 3.0E-65 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal AL538_05850 136c826ebef573f51b43df20f7ba9b2d 370 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 221 249 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_17510 67c46fbcefead62a005af9e224bee840 328 SMART SM00922 137 230 1.2E-17 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL538_17510 67c46fbcefead62a005af9e224bee840 328 SUPERFAMILY SSF54826 2 114 3.93E-23 T 11-10-2018 AL538_17510 67c46fbcefead62a005af9e224bee840 328 Gene3D G3DSA:3.30.390.10 1 112 3.0E-27 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL538_17510 67c46fbcefead62a005af9e224bee840 328 Gene3D G3DSA:3.20.20.120 123 328 1.1E-57 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_17510 67c46fbcefead62a005af9e224bee840 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AL538_17510 67c46fbcefead62a005af9e224bee840 328 Pfam PF13378 Enolase C-terminal domain-like 140 300 1.0E-28 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AL538_17510 67c46fbcefead62a005af9e224bee840 328 SUPERFAMILY SSF51604 125 321 1.97E-53 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_17510 67c46fbcefead62a005af9e224bee840 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 112 1.3E-10 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL538_04860 ea1df6bf34b41b0c857f3ec1929ee909 174 Gene3D G3DSA:3.40.50.360 1 174 4.0E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_04860 ea1df6bf34b41b0c857f3ec1929ee909 174 Pfam PF03358 NADPH-dependent FMN reductase 1 135 7.9E-27 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL538_04860 ea1df6bf34b41b0c857f3ec1929ee909 174 SUPERFAMILY SSF52218 1 173 1.22E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 668 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 338 2.5E-165 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 SUPERFAMILY SSF52922 538 669 8.64E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 SUPERFAMILY SSF52518 338 531 7.36E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Gene3D G3DSA:3.40.50.970 7 330 5.5E-129 T 11-10-2018 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Pfam PF02780 Transketolase, C-terminal domain 550 660 2.8E-21 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 ProSitePatterns PS00802 Transketolase signature 2. 472 488 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Gene3D G3DSA:3.40.50.920 543 669 2.6E-47 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 SUPERFAMILY SSF52518 10 324 6.16E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Gene3D G3DSA:3.40.50.970 331 542 5.0E-85 T 11-10-2018 AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 Pfam PF02779 Transketolase, pyrimidine binding domain 359 529 5.3E-48 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_06945 f9be9f838ae79a50847ff541bc9e61ef 669 SMART SM00861 359 530 3.0E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_12090 ddad5d68e90b4efa2182555c61158d2a 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 172 1.9E-47 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase AL538_12090 ddad5d68e90b4efa2182555c61158d2a 177 Gene3D G3DSA:3.90.950.10 1 176 3.8E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_12090 ddad5d68e90b4efa2182555c61158d2a 177 Pfam PF01931 Protein of unknown function DUF84 9 167 2.5E-58 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AL538_12090 ddad5d68e90b4efa2182555c61158d2a 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 30.734 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase AL538_12090 ddad5d68e90b4efa2182555c61158d2a 177 SUPERFAMILY SSF52972 5 173 2.92E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 SUPERFAMILY SSF51735 7 220 2.86E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 39 218 1.3E-32 T 11-10-2018 AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 68 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 205 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 148 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 165 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_21855 7a18a7b0cf5b6bc6eb96eb7d9de711ac 222 Gene3D G3DSA:3.40.50.720 1 222 1.6E-58 T 11-10-2018 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 Gene3D G3DSA:3.40.50.150 13 364 8.5E-140 T 11-10-2018 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AL538_08825 42881646e2e222c4fbf2c675450a541b 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.688 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 367 4.2E-191 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 367 2.5E-187 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 Gene3D G3DSA:3.40.1350.30 45 189 8.5E-140 T 11-10-2018 AL538_08825 42881646e2e222c4fbf2c675450a541b 369 SUPERFAMILY SSF53335 10 367 4.59E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_08825 42881646e2e222c4fbf2c675450a541b 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site AL538_04720 47fd1125abe60c7142aef244765c5e36 563 SUPERFAMILY SSF82689 460 556 1.05E-31 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL538_04720 47fd1125abe60c7142aef244765c5e36 563 Gene3D G3DSA:3.30.70.100 458 550 1.2E-26 T 11-10-2018 AL538_04720 47fd1125abe60c7142aef244765c5e36 563 SUPERFAMILY SSF82861 304 390 1.16E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AL538_04720 47fd1125abe60c7142aef244765c5e36 563 Pfam PF00924 Mechanosensitive ion channel 355 546 1.7E-54 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_04720 47fd1125abe60c7142aef244765c5e36 563 Gene3D G3DSA:2.30.30.60 407 455 2.7E-18 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_04720 47fd1125abe60c7142aef244765c5e36 563 SUPERFAMILY SSF50182 391 457 2.26E-18 T 11-10-2018 IPR010920 LSM domain superfamily AL538_05925 65ddac2284593c2c5e7daa07c62c9766 477 Pfam PF13520 Amino acid permease 11 439 1.3E-31 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_05925 65ddac2284593c2c5e7daa07c62c9766 477 Gene3D G3DSA:1.20.1740.10 5 471 4.6E-9 T 11-10-2018 AL538_05925 65ddac2284593c2c5e7daa07c62c9766 477 PIRSF PIRSF006060 1 476 5.3E-53 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_20710 ca7ba8cba87cf3aae0b5112fb85dd088 265 Gene3D G3DSA:1.10.260.40 5 138 1.4E-8 T 11-10-2018 AL538_20710 ca7ba8cba87cf3aae0b5112fb85dd088 265 SUPERFAMILY SSF47413 3 73 5.35E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_16725 afb6ab85a7cfc0c177ca04e03f064ded 159 Gene3D G3DSA:2.40.160.20 18 159 1.7E-24 T 11-10-2018 AL538_16725 afb6ab85a7cfc0c177ca04e03f064ded 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 7.5E-18 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_16725 afb6ab85a7cfc0c177ca04e03f064ded 159 SUPERFAMILY SSF56925 17 158 1.28E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 SMART SM00267 358 526 9.8E-30 T 11-10-2018 IPR000160 GGDEF domain AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 SUPERFAMILY SSF55073 374 524 3.45E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 3.2E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 6.4E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 Gene3D G3DSA:3.30.70.270 355 526 8.5E-43 T 11-10-2018 AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 SUPERFAMILY SSF48452 37 227 1.64E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17370 a61db21bb4f1128dd11da04ed05f0064 527 Gene3D G3DSA:1.25.40.10 32 343 1.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_06740 0c1507609448547cb5695b308ee9a4e0 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.655 T 11-10-2018 IPR023081 Cell division protein FtsB AL538_06740 0c1507609448547cb5695b308ee9a4e0 93 Gene3D G3DSA:1.20.5.400 22 63 7.1E-13 T 11-10-2018 AL538_06740 0c1507609448547cb5695b308ee9a4e0 93 Pfam PF04977 Septum formation initiator 11 89 9.2E-30 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AL538_00770 96a17e0ef8abb17be1dc07edd9d98933 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 4.7E-10 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 Gene3D G3DSA:2.30.40.10 6 425 2.1E-134 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 SUPERFAMILY SSF51556 55 371 7.56E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 Pfam PF01979 Amidohydrolase family 51 424 2.4E-20 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 Gene3D G3DSA:3.20.20.140 56 410 2.1E-134 T 11-10-2018 AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 SUPERFAMILY SSF51338 3 432 1.0E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_26930 78f15922f382ec1b4a467e4ff262d8c7 444 ProSitePatterns PS00483 Dihydroorotase signature 2. 306 317 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 5.7E-149 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 995 5.1E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 SMART SM00481 4 73 2.9E-7 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Pfam PF02811 PHP domain 8 99 2.3E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 6.2E-156 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.192 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Gene3D G3DSA:3.20.20.140 1 247 4.1E-34 T 11-10-2018 AL538_03815 9f352113743c413f8f87be8e9d0ae92f 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 8.9E-14 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05210 938ef8b79cec099a587661a20fc2e4e2 110 Pfam PF13698 Domain of unknown function (DUF4156) 25 109 9.7E-21 T 11-10-2018 IPR025294 Protein of unknown function DUF4156 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 Pfam PF13437 HlyD family secretion protein 200 271 4.2E-6 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 Gene3D G3DSA:2.40.50.100 43 234 5.9E-40 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 SUPERFAMILY SSF111369 178 253 8.37E-6 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 Gene3D G3DSA:1.10.287.470 77 199 5.9E-40 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 SUPERFAMILY SSF111369 106 165 1.07E-6 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 Gene3D G3DSA:2.40.30.170 35 311 5.9E-40 T 11-10-2018 AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 Pfam PF13533 Biotin-lipoyl like 44 88 6.2E-16 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_03540 539aa7885d9d301e2bd59110e57ee432 354 SUPERFAMILY SSF111369 38 95 2.75E-9 T 11-10-2018 AL538_09285 263e6d98154c5aa336284ff2205a1d49 290 Gene3D G3DSA:3.20.20.150 7 280 1.6E-86 T 11-10-2018 AL538_09285 263e6d98154c5aa336284ff2205a1d49 290 Hamap MF_00697 UPF0276 protein . 10 282 43.827 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AL538_09285 263e6d98154c5aa336284ff2205a1d49 290 SUPERFAMILY SSF51658 30 256 1.69E-12 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_09285 263e6d98154c5aa336284ff2205a1d49 290 Pfam PF05114 Protein of unknown function (DUF692) 10 273 1.7E-106 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 469 5.2E-196 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 Gene3D G3DSA:3.40.50.620 2 317 1.4E-134 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_13365 63c76230dbcd07280f0861e718844d7a 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 8.7E-116 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 SUPERFAMILY SSF52374 3 301 9.38E-110 T 11-10-2018 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 SUPERFAMILY SSF48163 302 465 2.35E-45 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 Gene3D G3DSA:1.10.10.350 369 473 7.1E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 465 32.08 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AL538_13365 63c76230dbcd07280f0861e718844d7a 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_25110 272d3a44a52870eb48369ec714ce7f7d 507 SUPERFAMILY SSF48208 51 467 1.11E-42 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_25110 272d3a44a52870eb48369ec714ce7f7d 507 Gene3D G3DSA:1.50.10.10 54 450 1.2E-17 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL538_25110 272d3a44a52870eb48369ec714ce7f7d 507 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 112 343 3.9E-6 T 11-10-2018 AL538_07505 eb0c63cfcf003793c60bddc6df6c084e 163 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07505 eb0c63cfcf003793c60bddc6df6c084e 163 SUPERFAMILY SSF54523 7 59 6.59E-13 T 11-10-2018 AL538_07505 eb0c63cfcf003793c60bddc6df6c084e 163 Gene3D G3DSA:3.30.700.10 7 163 1.3E-12 T 11-10-2018 AL538_07505 eb0c63cfcf003793c60bddc6df6c084e 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07505 eb0c63cfcf003793c60bddc6df6c084e 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.2E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 500 7.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 SUPERFAMILY SSF47384 324 395 4.9E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Gene3D G3DSA:3.40.190.10 82 202 3.0E-18 T 11-10-2018 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 SMART SM00388 332 401 1.3E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Pfam PF00512 His Kinase A (phospho-acceptor) domain 334 395 2.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 5 237 3.5E-34 T 11-10-2018 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Gene3D G3DSA:3.40.190.10 7 229 3.0E-18 T 11-10-2018 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 SMART SM00387 443 554 5.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Gene3D G3DSA:3.30.565.10 400 557 9.3E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 SUPERFAMILY SSF55874 387 552 1.44E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 444 552 5.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 Gene3D G3DSA:1.10.287.130 338 398 4.1E-17 T 11-10-2018 AL538_16115 befb3eba1cab13e1896e9f131a3999a0 559 SUPERFAMILY SSF53850 9 235 5.2E-15 T 11-10-2018 AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 SUPERFAMILY SSF81296 2 90 1.54E-16 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 Gene3D G3DSA:1.50.10.10 94 579 1.6E-232 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 1.4E-10 T 11-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 SUPERFAMILY SSF48208 77 565 4.42E-93 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 Pfam PF00759 Glycosyl hydrolase family 9 99 500 3.3E-23 T 11-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL538_06325 88bf21d5af34020bb26cf6947fee94f8 579 Gene3D G3DSA:2.60.40.10 1 93 1.7E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:3.20.20.80 304 650 4.5E-81 T 11-10-2018 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SUPERFAMILY SSF54556 629 752 5.8E-15 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SUPERFAMILY SSF51445 316 786 2.31E-75 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:3.20.20.80 759 783 4.4E-14 T 11-10-2018 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:2.60.40.10 198 286 3.6E-20 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Pfam PF00704 Glycosyl hydrolases family 18 323 782 1.1E-86 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Pfam PF14600 Cellulose-binding domain 999 1051 4.5E-16 T 11-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SUPERFAMILY SSF51055 996 1053 1.23E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:2.60.40.10 98 189 9.3E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SMART SM00495 1009 1051 7.5E-10 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SMART SM00495 37 82 4.1E-14 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SUPERFAMILY SSF51055 22 85 1.83E-17 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:2.10.10.20 16 88 2.7E-16 T 11-10-2018 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 SMART SM00636 322 782 2.1E-122 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:2.10.10.20 994 1053 3.2E-19 T 11-10-2018 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Pfam PF06483 Chitinase C 810 975 3.8E-72 T 11-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_23995 31ab5a0db997f27d475ad3cab10ffc22 1054 Gene3D G3DSA:3.10.50.10 695 758 4.4E-14 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_05690 50f689e4ff60b7a700d8633e72151367 181 PIRSF PIRSF001467 6 180 7.2E-25 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AL538_05690 50f689e4ff60b7a700d8633e72151367 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AL538_05690 50f689e4ff60b7a700d8633e72151367 181 Gene3D G3DSA:2.40.100.10 18 181 9.9E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_05690 50f689e4ff60b7a700d8633e72151367 181 SUPERFAMILY SSF50891 18 180 3.8E-53 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_05690 50f689e4ff60b7a700d8633e72151367 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 8.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_05690 50f689e4ff60b7a700d8633e72151367 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 8.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_05690 50f689e4ff60b7a700d8633e72151367 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 8.2E-11 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_05690 50f689e4ff60b7a700d8633e72151367 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 177 7.0E-44 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AL538_22080 584158afb70f2f7aad76221785a32023 343 SUPERFAMILY SSF53756 10 316 4.71E-37 T 11-10-2018 AL538_22080 584158afb70f2f7aad76221785a32023 343 Gene3D G3DSA:3.40.50.2000 183 334 5.9E-17 T 11-10-2018 AL538_22080 584158afb70f2f7aad76221785a32023 343 Pfam PF13692 Glycosyl transferases group 1 182 311 8.6E-16 T 11-10-2018 AL538_22080 584158afb70f2f7aad76221785a32023 343 Gene3D G3DSA:3.40.50.2000 3 182 5.1E-12 T 11-10-2018 AL538_22080 584158afb70f2f7aad76221785a32023 343 Pfam PF13439 Glycosyltransferase Family 4 13 158 3.8E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 Pfam PF00593 TonB dependent receptor 225 691 2.4E-64 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 693 1.1E-143 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 Gene3D G3DSA:2.170.130.10 28 156 2.3E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 1.3E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 SUPERFAMILY SSF56935 19 693 1.83E-121 T 11-10-2018 AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 Gene3D G3DSA:2.40.170.20 166 693 2.0E-116 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_24260 d22bda46444edd9fad6cbcd7defe5434 693 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 693 4.6E-151 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AL538_05430 35f8f41d33fc6d2c4cebeff3758f20da 166 Gene3D G3DSA:3.30.910.20 22 166 1.2E-34 T 11-10-2018 IPR024930 Skp domain superfamily AL538_05430 35f8f41d33fc6d2c4cebeff3758f20da 166 PIRSF PIRSF002094 1 166 3.7E-41 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL538_05430 35f8f41d33fc6d2c4cebeff3758f20da 166 SUPERFAMILY SSF111384 23 166 1.1E-31 T 11-10-2018 AL538_05430 35f8f41d33fc6d2c4cebeff3758f20da 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 2.2E-27 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL538_05430 35f8f41d33fc6d2c4cebeff3758f20da 166 SMART SM00935 12 166 1.8E-44 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.887 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 SUPERFAMILY SSF102735 1 131 2.49E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.8E-43 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 SUPERFAMILY SSF54534 90 241 1.45E-36 T 11-10-2018 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 4.3E-144 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Gene3D G3DSA:1.10.3120.10 116 417 1.5E-107 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Gene3D G3DSA:3.10.50.40 150 246 1.5E-107 T 11-10-2018 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Gene3D G3DSA:3.30.70.1050 1 115 5.9E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 PIRSF PIRSF003095 1 434 2.0E-128 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 6.6E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 SUPERFAMILY SSF109998 248 429 1.37E-50 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AL538_14245 ea8bfbbe7900fa09baf734e253dc4f75 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 2.9E-41 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AL538_18470 51cd443f45fb02f32e560a6800339e71 60 SUPERFAMILY SSF89447 1 47 1.62E-8 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily AL538_18470 51cd443f45fb02f32e560a6800339e71 60 Gene3D G3DSA:2.10.260.10 6 52 1.9E-6 T 11-10-2018 AL538_18470 51cd443f45fb02f32e560a6800339e71 60 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 45 2.4E-6 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL538_18470 51cd443f45fb02f32e560a6800339e71 60 SMART SM00966 6 49 0.0024 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 Gene3D G3DSA:1.10.260.40 1 67 5.9E-17 T 11-10-2018 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 6.0E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 Gene3D G3DSA:3.40.50.2300 167 295 1.7E-66 T 11-10-2018 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 Gene3D G3DSA:3.40.50.2300 70 311 1.7E-66 T 11-10-2018 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 11-10-2018 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 SUPERFAMILY SSF47413 9 67 2.4E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 SUPERFAMILY SSF53822 67 322 7.66E-56 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 SMART SM00354 9 79 1.8E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_09950 498af06ea9129f3f3b7e9c8d611ca3fe 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 1.5E-29 T 11-10-2018 AL538_15435 1ebb76e5f35070a32ff2e74ad776224b 208 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 106 1.7E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_15435 1ebb76e5f35070a32ff2e74ad776224b 208 SUPERFAMILY SSF46894 31 106 5.39E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_15435 1ebb76e5f35070a32ff2e74ad776224b 208 Gene3D G3DSA:1.10.10.10 2 107 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15435 1ebb76e5f35070a32ff2e74ad776224b 208 SMART SM00862 33 106 1.3E-7 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_11530 d6535a527a55ba6e10e44baf0c4f7adc 367 Pfam PF03969 AFG1-like ATPase 1 364 4.5E-154 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AL538_11530 d6535a527a55ba6e10e44baf0c4f7adc 367 SUPERFAMILY SSF52540 60 193 4.16E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11530 d6535a527a55ba6e10e44baf0c4f7adc 367 Gene3D G3DSA:3.40.50.300 18 195 9.4E-23 T 11-10-2018 AL538_11530 d6535a527a55ba6e10e44baf0c4f7adc 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.174 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 Gene3D G3DSA:1.10.10.10 123 237 1.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 Gene3D G3DSA:3.40.50.2300 2 122 5.2E-33 T 11-10-2018 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 SMART SM00448 8 118 2.0E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 Pfam PF00072 Response regulator receiver domain 10 119 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 3.9E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 SMART SM00862 154 230 1.8E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 SUPERFAMILY SSF52172 7 130 5.98E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_22330 9658d03246a86418f91571c4f6b0ce76 237 SUPERFAMILY SSF46894 131 232 3.12E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_00730 fd6076b1827beae893c55892172297e9 297 SUPERFAMILY SSF52402 15 233 2.3E-53 T 11-10-2018 AL538_00730 fd6076b1827beae893c55892172297e9 297 Pfam PF01171 PP-loop family 41 203 5.4E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AL538_00730 fd6076b1827beae893c55892172297e9 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.393 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 AL538_00730 fd6076b1827beae893c55892172297e9 297 Gene3D G3DSA:3.40.50.620 2 268 2.0E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_00730 fd6076b1827beae893c55892172297e9 297 PIRSF PIRSF004976 3 283 5.7E-70 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 11-10-2018 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 SUPERFAMILY SSF55904 568 708 4.45E-43 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Gene3D G3DSA:3.90.100.10 595 711 2.4E-46 T 11-10-2018 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 SUPERFAMILY SSF53383 130 562 6.3E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 6.1E-189 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 PIRSF PIRSF009393 1 711 4.5E-288 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Gene3D G3DSA:3.40.640.10 130 424 5.2E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_08555 113e5fa998a6f97c476594e5fbd87396 711 Gene3D G3DSA:3.90.1150.10 425 594 9.3E-71 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 Gene3D G3DSA:1.10.287.1040 4 80 2.0E-22 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 PIRSF PIRSF006488 1 80 2.8E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 SUPERFAMILY SSF116842 2 72 8.89E-21 T 11-10-2018 AL538_12895 e49286a32c44b91f17964b74b61c0976 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AL538_15765 efbb3f31dddca2bac6534cbb985ba485 205 Gene3D G3DSA:1.10.3890.10 1 205 1.8E-77 T 11-10-2018 IPR035932 HflD-like superfamily AL538_15765 efbb3f31dddca2bac6534cbb985ba485 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.743 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AL538_15765 efbb3f31dddca2bac6534cbb985ba485 205 SUPERFAMILY SSF101322 2 204 4.71E-80 T 11-10-2018 IPR035932 HflD-like superfamily AL538_15765 efbb3f31dddca2bac6534cbb985ba485 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.1E-76 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD AL538_15765 efbb3f31dddca2bac6534cbb985ba485 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-102 T 11-10-2018 AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 290 1.2E-36 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 SUPERFAMILY SSF48179 167 290 3.4E-35 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 Gene3D G3DSA:3.40.50.720 1 166 8.0E-49 T 11-10-2018 AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 1.2E-81 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 141 1.5E-30 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 SUPERFAMILY SSF51735 2 165 2.22E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05725 616e9a4c694dfd80b70ba712b0c417ff 296 Gene3D G3DSA:1.10.1040.10 167 296 2.2E-41 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_23040 17d1a1ad0866b0da69a340233c717585 334 Gene3D G3DSA:3.40.50.2300 140 326 2.6E-118 T 11-10-2018 AL538_23040 17d1a1ad0866b0da69a340233c717585 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 2.1E-134 T 11-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT AL538_23040 17d1a1ad0866b0da69a340233c717585 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 317 5.8E-33 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL538_23040 17d1a1ad0866b0da69a340233c717585 334 SUPERFAMILY SSF53822 32 296 5.1E-39 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_23040 17d1a1ad0866b0da69a340233c717585 334 Gene3D G3DSA:3.40.50.2300 33 302 2.6E-118 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 SUPERFAMILY SSF111369 51 221 1.96E-21 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Pfam PF13437 HlyD family secretion protein 171 264 2.7E-9 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Gene3D G3DSA:1.10.287.470 94 167 5.7E-60 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Pfam PF13533 Biotin-lipoyl like 60 106 1.9E-14 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Gene3D G3DSA:2.40.50.100 60 206 5.7E-60 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Gene3D G3DSA:2.40.30.170 46 281 5.7E-60 T 11-10-2018 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 350 2.3E-57 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_21745 804bd7d9a00b3f29f2a6f3b4dc3c7d1b 360 Gene3D G3DSA:2.40.420.20 38 350 5.7E-60 T 11-10-2018 AL538_19445 1fadf635f9cfd1681f5ffb438c16beb9 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 137 250 2.3E-34 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_19445 1fadf635f9cfd1681f5ffb438c16beb9 286 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 54 264 3.9E-89 T 11-10-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0016020|GO:0022857|GO:0055085 AL538_02555 3978029c9bf34446447791b94a5a457b 246 SMART SM00901 36 146 1.1E-30 T 11-10-2018 IPR014966 FRG domain AL538_02555 3978029c9bf34446447791b94a5a457b 246 Pfam PF08867 FRG domain 41 137 9.1E-24 T 11-10-2018 IPR014966 FRG domain AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 1.8E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 Gene3D G3DSA:3.40.50.1820 3 254 5.8E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.1E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.1E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.1E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.1E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 SUPERFAMILY SSF53474 5 253 2.14E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 2.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 2.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 2.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_13705 25d7a9d9c1d4a54704eb62fd3441dc60 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 2.1E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 SMART SM00079 22 243 0.0019 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 Gene3D G3DSA:3.40.190.10 109 201 1.8E-77 T 11-10-2018 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 SMART SM00062 22 243 3.9E-74 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 SUPERFAMILY SSF53850 1 242 1.24E-69 T 11-10-2018 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 3.1E-83 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 Gene3D G3DSA:3.40.190.10 26 240 1.8E-77 T 11-10-2018 AL538_25420 447f9125f1652bc1d06b88c9d753346a 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.4E-65 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_06445 021630b07bbcff4151ffbb601dc1741c 305 Gene3D G3DSA:3.40.50.300 1 236 2.1E-65 T 11-10-2018 AL538_06445 021630b07bbcff4151ffbb601dc1741c 305 SUPERFAMILY SSF52540 3 231 7.1E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06445 021630b07bbcff4151ffbb601dc1741c 305 Pfam PF00005 ABC transporter 20 164 1.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_06445 021630b07bbcff4151ffbb601dc1741c 305 SMART SM00382 29 212 2.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06445 021630b07bbcff4151ffbb601dc1741c 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_10835 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL538_10835 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AL538_10835 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10835 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL538_10835 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 SUPERFAMILY SSF48435 33 481 1.01E-129 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 Gene3D G3DSA:1.10.530.10 478 647 9.2E-50 T 11-10-2018 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 Gene3D G3DSA:1.10.1240.20 408 476 1.3E-20 T 11-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 Gene3D G3DSA:1.25.20.10 33 394 8.7E-102 T 11-10-2018 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 SUPERFAMILY SSF53955 484 639 7.5E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 8.4E-24 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AL538_12080 b77703ff5b7a3eddb14ee831debcfe0d 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.6E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 PIRSF PIRSF000726 58 386 1.9E-73 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 PIRSF PIRSF000726 3 62 4.4E-23 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.6E-77 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 Gene3D G3DSA:3.40.1160.10 4 258 3.3E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 SUPERFAMILY SSF53633 6 242 4.19E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 Pfam PF00696 Amino acid kinase family 5 231 3.8E-52 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_06675 0c60930085d41057b15a4ce3a1d9c558 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AL538_20735 5a0735ed93117ee58258cb6909ad7e7b 192 SUPERFAMILY SSF51645 20 187 1.03E-25 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_20735 5a0735ed93117ee58258cb6909ad7e7b 192 Gene3D G3DSA:2.170.170.11 18 134 4.9E-29 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Gene3D G3DSA:2.30.30.40 604 733 4.1E-35 T 11-10-2018 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 603 2.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Pfam PF01627 Hpt domain 8 99 8.2E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Gene3D G3DSA:2.40.50.180 627 692 4.1E-35 T 11-10-2018 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SUPERFAMILY SSF55874 419 602 1.01E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Pfam PF01584 CheW-like domain 610 739 1.8E-22 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SMART SM00073 6 103 3.6E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 601 9.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 558 9.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 9.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 582 9.5E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Gene3D G3DSA:1.10.287.560 357 416 2.2E-19 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SUPERFAMILY SSF47384 358 417 6.28E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SMART SM01231 356 416 1.7E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Gene3D G3DSA:3.30.565.10 417 603 6.9E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SUPERFAMILY SSF47226 6 129 6.02E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SMART SM00387 461 604 2.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SMART SM00260 596 737 4.0E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 SUPERFAMILY SSF50341 603 737 1.83E-30 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Gene3D G3DSA:1.20.120.160 2 142 3.1E-36 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_05010 14ea01560a52c8eedddbb3b45d9b9e15 746 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 357 416 3.0E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 PIRSF PIRSF000138 2 379 2.4E-122 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.6E-126 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 379 71.934 T 11-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 Gene3D G3DSA:3.20.20.70 3 378 1.7E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17485 c7110c804acee54bdde91a59ae7541d9 379 SUPERFAMILY SSF51395 7 375 7.33E-99 T 11-10-2018 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 SUPERFAMILY SSF110921 393 498 5.75E-21 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Gene3D G3DSA:3.30.160.270 394 500 2.5E-7 T 11-10-2018 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 SMART SM00917 369 499 7.0E-29 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Pfam PF00682 HMGL-like 4 273 6.0E-101 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.238 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 3.1E-30 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Gene3D G3DSA:1.10.238.260 280 393 4.1E-32 T 11-10-2018 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 Gene3D G3DSA:3.20.20.70 1 277 4.4E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 2.1E-237 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AL538_11240 ae45afe43371f75bc5af2beee56a7088 515 SUPERFAMILY SSF51569 1 291 2.75E-101 T 11-10-2018 AL538_08250 119f01f4b63e3475da205e66812837dd 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_08250 119f01f4b63e3475da205e66812837dd 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_08250 119f01f4b63e3475da205e66812837dd 211 Gene3D G3DSA:1.10.357.10 1 209 3.1E-65 T 11-10-2018 AL538_08250 119f01f4b63e3475da205e66812837dd 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_08250 119f01f4b63e3475da205e66812837dd 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.4E-44 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR AL538_08250 119f01f4b63e3475da205e66812837dd 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_02120 a714302f0b69c2863069efe02f484489 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.677 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL538_02120 a714302f0b69c2863069efe02f484489 64 SUPERFAMILY SSF143034 2 63 5.1E-20 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02120 a714302f0b69c2863069efe02f484489 64 Gene3D G3DSA:2.40.50.530 1 64 7.3E-18 T 11-10-2018 AL538_02120 a714302f0b69c2863069efe02f484489 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_02120 a714302f0b69c2863069efe02f484489 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.7E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL538_02120 a714302f0b69c2863069efe02f484489 64 Pfam PF01632 Ribosomal protein L35 2 61 1.1E-20 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02120 a714302f0b69c2863069efe02f484489 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL538_02120 a714302f0b69c2863069efe02f484489 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.1E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL538_02120 a714302f0b69c2863069efe02f484489 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.1E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AL538_04115 aea88770a864caab10f9d59615446fa4 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.519 T 11-10-2018 IPR010119 Gluconeogenesis factor AL538_04115 aea88770a864caab10f9d59615446fa4 297 Gene3D G3DSA:3.40.50.12300 4 296 1.9E-80 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily AL538_04115 aea88770a864caab10f9d59615446fa4 297 SUPERFAMILY SSF142338 6 290 1.96E-83 T 11-10-2018 AL538_04115 aea88770a864caab10f9d59615446fa4 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 283 1.1E-75 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AL538_04115 aea88770a864caab10f9d59615446fa4 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 279 7.6E-103 T 11-10-2018 IPR010119 Gluconeogenesis factor AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 Gene3D G3DSA:3.30.70.920 52 146 1.2E-23 T 11-10-2018 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 4.6E-19 T 11-10-2018 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 5.3E-21 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 SUPERFAMILY SSF46785 1 60 1.83E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 SMART SM00344 1 110 1.0E-46 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 Gene3D G3DSA:1.10.10.10 2 51 2.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22590 aae62b362af9ca5db38471c1e8861fdf 151 SUPERFAMILY SSF54909 63 149 8.22E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_21700 087ea6a711637916acd9ba85184cd642 805 SUPERFAMILY SSF51445 283 631 3.45E-103 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_21700 087ea6a711637916acd9ba85184cd642 805 SUPERFAMILY SSF49303 191 285 4.6E-14 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL538_21700 087ea6a711637916acd9ba85184cd642 805 Gene3D G3DSA:2.60.40.10 191 282 1.8E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_21700 087ea6a711637916acd9ba85184cd642 805 Gene3D G3DSA:2.60.120.260 4 190 1.0E-47 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_21700 087ea6a711637916acd9ba85184cd642 805 Gene3D G3DSA:3.20.20.80 283 629 1.3E-121 T 11-10-2018 AL538_21700 087ea6a711637916acd9ba85184cd642 805 SUPERFAMILY SSF49303 736 803 2.3E-6 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily AL538_21700 087ea6a711637916acd9ba85184cd642 805 SUPERFAMILY SSF49785 3 188 1.7E-48 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 SMART SM00411 3 92 1.6E-40 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.644 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 SUPERFAMILY SSF47729 3 95 3.39E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 9.9E-51 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 Gene3D G3DSA:4.10.520.10 1 98 4.9E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_02015 7f663a2a56a688c01ad78fabea435f19 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PIRSF PIRSF001480 1 395 4.2E-102 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 Pfam PF01238 Phosphomannose isomerase type I 3 362 1.9E-84 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 5.6E-67 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 261 286 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 379 1.5E-90 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 Gene3D G3DSA:2.60.120.10 307 388 3.3E-133 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 SUPERFAMILY SSF51182 3 383 1.75E-94 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 Gene3D G3DSA:2.60.120.10 8 281 3.3E-133 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_17660 0d216250bebfa57927674e1122a8c7d0 395 Gene3D G3DSA:1.10.441.10 149 306 3.3E-133 T 11-10-2018 AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 SMART SM01086 335 429 2.1E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.8E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 3.4E-5 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 SMART SM00382 49 332 6.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.2E-222 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.128 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 Gene3D G3DSA:1.10.8.60 335 440 2.4E-39 T 11-10-2018 AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 SUPERFAMILY SSF52540 3 441 3.3E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10790 a8fab966b649d27ebd65979d1d82465c 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 7.7E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 SUPERFAMILY SSF50331 250 372 2.21E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 SMART SM00382 42 225 4.2E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 SUPERFAMILY SSF52540 18 257 5.6E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 Gene3D G3DSA:2.40.50.940 236 298 8.0E-12 T 11-10-2018 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 Pfam PF00005 ABC transporter 35 174 1.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 1.1E-156 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 Gene3D G3DSA:3.40.50.300 17 235 4.4E-69 T 11-10-2018 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 Gene3D G3DSA:2.40.50.140 299 316 8.0E-12 T 11-10-2018 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 Pfam PF08402 TOBE domain 292 371 7.9E-12 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_00710 c0eb19ea78b8de8b89f8f923b7f90ab8 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 Gene3D G3DSA:3.30.428.10 46 177 2.2E-55 T 11-10-2018 IPR036265 HIT-like superfamily AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 PIRSF PIRSF000808 2 345 1.0E-124 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.3E-66 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 SUPERFAMILY SSF54197 181 349 8.68E-55 T 11-10-2018 IPR036265 HIT-like superfamily AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 4.5E-67 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 Gene3D G3DSA:3.30.428.10 178 350 6.0E-73 T 11-10-2018 IPR036265 HIT-like superfamily AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 SUPERFAMILY SSF54197 6 179 3.4E-73 T 11-10-2018 IPR036265 HIT-like superfamily AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL538_05890 1496beb3ba7f09c4e98f0d52e22e3a4d 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 1.6E-187 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 AL538_00590 5f6773f0d2eccb714b49052419950c73 239 SMART SM00382 29 201 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00590 5f6773f0d2eccb714b49052419950c73 239 Gene3D G3DSA:3.40.50.300 2 229 2.1E-51 T 11-10-2018 AL538_00590 5f6773f0d2eccb714b49052419950c73 239 Pfam PF00005 ABC transporter 25 165 2.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00590 5f6773f0d2eccb714b49052419950c73 239 SUPERFAMILY SSF52540 5 216 4.28E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00590 5f6773f0d2eccb714b49052419950c73 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 Gene3D G3DSA:3.30.70.120 1 112 1.8E-46 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 SUPERFAMILY SSF54913 1 112 3.5E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 SMART SM00938 4 105 1.8E-68 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 9.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_06370 53e82ce4c77228419c32ecab7b768c8b 112 PIRSF PIRSF039144 1 112 2.2E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_00905 11d81affb0cb27296d106f7bc3d522d7 415 Pfam PF04403 Paraquat-inducible protein A 54 205 2.6E-36 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL538_00905 11d81affb0cb27296d106f7bc3d522d7 415 Pfam PF04403 Paraquat-inducible protein A 248 403 9.4E-48 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL538_00905 11d81affb0cb27296d106f7bc3d522d7 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 10 402 4.4E-105 T 11-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 SUPERFAMILY SSF47203 234 386 2.26E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 1.9E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Gene3D G3DSA:1.10.540.10 2 127 2.5E-46 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Gene3D G3DSA:2.40.110.10 128 240 2.7E-44 T 11-10-2018 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 SUPERFAMILY SSF56645 6 249 1.1E-83 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.5E-43 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Gene3D G3DSA:1.20.140.10 241 385 4.8E-47 T 11-10-2018 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 7.4E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 PIRSF PIRSF016578 134 389 5.9E-12 T 11-10-2018 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 PIRSF PIRSF016578 15 103 0.032 T 11-10-2018 AL538_23655 65128a4c0bb9d3a215441ada49f0337a 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 Gene3D G3DSA:3.20.20.70 3 339 1.6E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 Pfam PF01070 FMN-dependent dehydrogenase 17 103 2.7E-8 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 Pfam PF01070 FMN-dependent dehydrogenase 114 335 2.2E-18 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 PIRSF PIRSF003314 1 339 2.3E-117 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 337 3.1E-115 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 SUPERFAMILY SSF51395 26 338 3.02E-74 T 11-10-2018 AL538_21100 ff73fc5f42bdd4622ebd98ad59dd7862 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 38.042 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AL538_07910 af56107e24aa128a3bb1a7faec7af767 118 Gene3D G3DSA:3.40.1260.10 1 118 2.1E-38 T 11-10-2018 IPR027396 DsrEFH-like AL538_07910 af56107e24aa128a3bb1a7faec7af767 118 SUPERFAMILY SSF75169 3 118 1.3E-35 T 11-10-2018 IPR027396 DsrEFH-like AL538_07910 af56107e24aa128a3bb1a7faec7af767 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 1.1E-45 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF AL538_07910 af56107e24aa128a3bb1a7faec7af767 118 Pfam PF02635 DsrE/DsrF-like family 4 118 5.9E-24 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 SMART SM00448 1 112 2.8E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 Gene3D G3DSA:3.40.50.2300 1 122 1.0E-35 T 11-10-2018 AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 SUPERFAMILY SSF46894 119 217 1.05E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 SUPERFAMILY SSF52172 1 118 8.54E-36 T 11-10-2018 IPR011006 CheY-like superfamily AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 Gene3D G3DSA:1.10.10.10 123 219 3.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 SMART SM00862 145 216 4.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_16185 1a5e60aaf35fbbd313794d12b0e4d22e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_07025 fa6e408b2f1da80ef0dd98b98688499d 200 SUPERFAMILY SSF52972 1 195 1.75E-73 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_07025 fa6e408b2f1da80ef0dd98b98688499d 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.7E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AL538_07025 fa6e408b2f1da80ef0dd98b98688499d 200 Pfam PF01725 Ham1 family 4 191 3.8E-57 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AL538_07025 fa6e408b2f1da80ef0dd98b98688499d 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.836 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AL538_07025 fa6e408b2f1da80ef0dd98b98688499d 200 Gene3D G3DSA:3.90.950.10 1 199 1.2E-82 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_25945 70e29afb00f12ba502df86c60e0121e9 146 Pfam PF04945 YHS domain 38 83 8.4E-12 T 11-10-2018 IPR007029 YHS domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 SUPERFAMILY SSF54631 151 278 1.6E-27 T 11-10-2018 AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.5E-46 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 SUPERFAMILY SSF51206 7 135 4.19E-29 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 SMART SM00100 17 134 1.1E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Gene3D G3DSA:2.60.120.10 1 144 5.1E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 SMART SM00116 159 216 6.5E-5 T 11-10-2018 IPR000644 CBS domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 SMART SM00116 233 280 7.1E-7 T 11-10-2018 IPR000644 CBS domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 3.8E-46 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Pfam PF00571 CBS domain 152 214 1.5E-7 T 11-10-2018 IPR000644 CBS domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Pfam PF00571 CBS domain 226 278 1.6E-10 T 11-10-2018 IPR000644 CBS domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 2.1E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_03075 afefdd7ba21e7aa77e035c4d25904517 629 Gene3D G3DSA:3.10.580.10 145 283 9.5E-33 T 11-10-2018 AL538_01890 1ed2c5da357b567fb78a1021e86378e9 168 Pfam PF13671 AAA domain 6 137 2.0E-12 T 11-10-2018 AL538_01890 1ed2c5da357b567fb78a1021e86378e9 168 Gene3D G3DSA:3.40.50.300 2 167 9.8E-28 T 11-10-2018 AL538_01890 1ed2c5da357b567fb78a1021e86378e9 168 SUPERFAMILY SSF52540 4 166 3.15E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11140 a03c4258d6365b18867df899e60fc79c 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 PIRSF PIRSF000102 1 308 4.7E-62 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 2.7E-49 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 SUPERFAMILY SSF51735 1 145 3.67E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_11140 a03c4258d6365b18867df899e60fc79c 311 Gene3D G3DSA:3.90.110.10 147 311 2.0E-54 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 3.8E-129 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.441 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 Gene3D G3DSA:3.40.50.720 1 146 9.3E-66 T 11-10-2018 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 SUPERFAMILY SSF56327 146 309 3.55E-43 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_11140 a03c4258d6365b18867df899e60fc79c 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 3.8E-47 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_08185 c96d034232a091c094df0f7a87aaed2a 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.129 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 AL538_08185 c96d034232a091c094df0f7a87aaed2a 181 Gene3D G3DSA:3.30.420.10 1 181 4.8E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_08185 c96d034232a091c094df0f7a87aaed2a 181 SMART SM00479 7 180 2.6E-24 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_08185 c96d034232a091c094df0f7a87aaed2a 181 SUPERFAMILY SSF53098 3 180 1.71E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_08185 c96d034232a091c094df0f7a87aaed2a 181 Pfam PF00929 Exonuclease 9 170 1.9E-36 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 484 2.4E-82 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 Pfam PF02321 Outer membrane efflux protein 64 273 3.3E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 Pfam PF02321 Outer membrane efflux protein 304 483 2.9E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 Gene3D G3DSA:1.20.1600.10 53 486 8.2E-108 T 11-10-2018 AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 Gene3D G3DSA:2.20.200.10 99 374 8.2E-108 T 11-10-2018 AL538_21735 82fc0be89884e6c2a9c575a386fc6012 497 SUPERFAMILY SSF56954 1 486 5.89E-92 T 11-10-2018 AL538_12345 03c277817dbfb7402df89be03fb336cd 168 Pfam PF02082 Transcriptional regulator 1 83 9.6E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL538_12345 03c277817dbfb7402df89be03fb336cd 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL538_12345 03c277817dbfb7402df89be03fb336cd 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.688 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL538_12345 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.2E-66 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AL538_12345 03c277817dbfb7402df89be03fb336cd 168 Gene3D G3DSA:1.10.10.10 1 144 2.1E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12345 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-47 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL538_12345 03c277817dbfb7402df89be03fb336cd 168 SUPERFAMILY SSF46785 2 133 1.61E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15815 96213329129898ef671c4ddba3b0829e 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.8E-66 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 2.2E-47 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL538_15815 96213329129898ef671c4ddba3b0829e 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.847 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.185 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AL538_15815 96213329129898ef671c4ddba3b0829e 357 Gene3D G3DSA:3.30.230.40 257 357 7.4E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 SUPERFAMILY SSF54211 254 344 4.05E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_15815 96213329129898ef671c4ddba3b0829e 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 5.0E-5 T 11-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 AL538_15815 96213329129898ef671c4ddba3b0829e 357 Gene3D G3DSA:3.40.50.1000 1 165 2.5E-46 T 11-10-2018 IPR023214 HAD superfamily AL538_15815 96213329129898ef671c4ddba3b0829e 357 Gene3D G3DSA:3.30.230.40 166 256 2.3E-36 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AL538_15815 96213329129898ef671c4ddba3b0829e 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 7.1E-79 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AL538_15815 96213329129898ef671c4ddba3b0829e 357 SUPERFAMILY SSF54211 169 253 1.64E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_15815 96213329129898ef671c4ddba3b0829e 357 SUPERFAMILY SSF56784 3 158 5.69E-39 T 11-10-2018 IPR036412 HAD-like superfamily AL538_15815 96213329129898ef671c4ddba3b0829e 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 1.6E-27 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL538_10455 0be9f449690592b437eeb06da39015a9 279 Pfam PF00005 ABC transporter 32 181 2.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_10455 0be9f449690592b437eeb06da39015a9 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_10455 0be9f449690592b437eeb06da39015a9 279 SUPERFAMILY SSF52540 6 254 4.85E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10455 0be9f449690592b437eeb06da39015a9 279 Gene3D G3DSA:3.40.50.300 3 279 3.9E-88 T 11-10-2018 AL538_10455 0be9f449690592b437eeb06da39015a9 279 SMART SM00382 40 240 9.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15145 feaa3a2fb123421941955fea2a4dacd2 118 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 1.1E-41 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AL538_15145 feaa3a2fb123421941955fea2a4dacd2 118 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 1.6E-40 T 11-10-2018 IPR013348 Type III secretion system YscG GO:0009405 AL538_15145 feaa3a2fb123421941955fea2a4dacd2 118 Gene3D G3DSA:1.25.40.10 1 117 1.1E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_08495 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_08495 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AL538_08495 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_08495 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_08495 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 11-10-2018 AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 SUPERFAMILY SSF56925 23 181 7.32E-36 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 Gene3D G3DSA:2.40.160.20 13 200 4.3E-44 T 11-10-2018 AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 Pfam PF00691 OmpA family 215 303 3.0E-19 T 11-10-2018 IPR006665 OmpA-like domain AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 PRINTS PR01021 OMPA domain signature 239 254 1.5E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 PRINTS PR01021 OMPA domain signature 254 270 1.5E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 Pfam PF01389 OmpA-like transmembrane domain 23 180 7.5E-23 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 Gene3D G3DSA:3.30.1330.60 203 318 1.6E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_20950 af9c9bf9df5efaa4564378ee07be00a1 321 SUPERFAMILY SSF103088 194 309 9.42E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.4E-132 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 Gene3D G3DSA:3.40.50.1370 151 319 2.9E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 Gene3D G3DSA:3.40.50.1370 5 329 2.9E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-45 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 SUPERFAMILY SSF53671 4 333 2.49E-98 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.129 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 6.4E-56 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_07285 bfd582ae37484cc5ad4a602bc2e0a75b 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AL538_16700 c9d98005e718d43b3d12aa6c00b1095d 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 4.4E-50 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 509 7.2E-252 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 SUPERFAMILY SSF50615 10 94 9.61E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Gene3D G3DSA:1.20.150.20 383 512 2.8E-46 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.809 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 SUPERFAMILY SSF52540 96 381 5.88E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Gene3D G3DSA:3.40.50.300 94 382 3.9E-130 T 11-10-2018 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 SUPERFAMILY SSF47917 383 509 1.62E-43 T 11-10-2018 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 6.0E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.1E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.8E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_23160 44b5501e78e5d15e976a5024ce110179 512 Gene3D G3DSA:2.40.30.20 1 93 6.2E-28 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_21655 303ad787cac71fb9850f0310e4b03b77 442 Gene3D G3DSA:2.40.50.100 66 252 2.6E-31 T 11-10-2018 AL538_21655 303ad787cac71fb9850f0310e4b03b77 442 Gene3D G3DSA:1.10.287.470 103 218 2.6E-31 T 11-10-2018 AL538_21655 303ad787cac71fb9850f0310e4b03b77 442 SUPERFAMILY SSF111369 62 356 2.22E-7 T 11-10-2018 AL538_21655 303ad787cac71fb9850f0310e4b03b77 442 Gene3D G3DSA:2.40.420.20 362 424 2.6E-31 T 11-10-2018 AL538_21655 303ad787cac71fb9850f0310e4b03b77 442 Gene3D G3DSA:2.40.30.170 60 361 2.6E-31 T 11-10-2018 AL538_02180 18727becc46acde162681c479c615dc5 1011 SUPERFAMILY SSF55103 252 538 9.97E-54 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AL538_02180 18727becc46acde162681c479c615dc5 1011 SUPERFAMILY SSF46548 571 685 9.42E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_02180 18727becc46acde162681c479c615dc5 1011 Pfam PF13183 4Fe-4S dicluster domain 571 681 5.0E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_02180 18727becc46acde162681c479c615dc5 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_02180 18727becc46acde162681c479c615dc5 1011 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 3.9E-62 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AL538_02180 18727becc46acde162681c479c615dc5 1011 Gene3D G3DSA:3.30.70.2740 414 495 3.4E-5 T 11-10-2018 AL538_02180 18727becc46acde162681c479c615dc5 1011 Pfam PF01565 FAD binding domain 52 191 7.7E-37 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AL538_02180 18727becc46acde162681c479c615dc5 1011 SUPERFAMILY SSF56176 27 277 1.35E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AL538_02180 18727becc46acde162681c479c615dc5 1011 Gene3D G3DSA:3.30.465.40 17 211 5.6E-48 T 11-10-2018 AL538_24860 1c73b580c69563a6e6876aeb8e507ef1 159 SUPERFAMILY SSF141452 4 157 1.15E-35 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_24860 1c73b580c69563a6e6876aeb8e507ef1 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 4.9E-28 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL538_24860 1c73b580c69563a6e6876aeb8e507ef1 159 Gene3D G3DSA:2.30.110.20 2 158 2.7E-33 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 SMART SM00636 626 941 0.0048 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 Gene3D G3DSA:2.60.40.10 526 616 1.4E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 SUPERFAMILY SSF51445 627 946 8.54E-33 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 Gene3D G3DSA:2.60.40.10 166 263 1.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 Gene3D G3DSA:2.60.40.10 429 524 1.2E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 Gene3D G3DSA:2.60.40.10 266 361 3.0E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_25130 d5e7d972d2972925922e82b0e9c5c196 962 Pfam PF00704 Glycosyl hydrolases family 18 629 940 2.9E-17 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_20705 1e9e25c46df48dd3eb3e227557ba1e94 424 Pfam PF00483 Nucleotidyl transferase 18 270 1.9E-22 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL538_20705 1e9e25c46df48dd3eb3e227557ba1e94 424 Gene3D G3DSA:3.90.550.10 1 278 1.7E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_20705 1e9e25c46df48dd3eb3e227557ba1e94 424 SUPERFAMILY SSF51161 308 401 5.54E-19 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_20705 1e9e25c46df48dd3eb3e227557ba1e94 424 Gene3D G3DSA:2.160.10.10 284 402 4.3E-27 T 11-10-2018 AL538_20705 1e9e25c46df48dd3eb3e227557ba1e94 424 SUPERFAMILY SSF53448 18 323 1.15E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_20075 d57eab32452c947fb561d19adb399bd1 318 Gene3D G3DSA:1.10.3470.10 1 317 3.2E-65 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_20075 d57eab32452c947fb561d19adb399bd1 318 SUPERFAMILY SSF81345 4 313 6.8E-67 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_20075 d57eab32452c947fb561d19adb399bd1 318 Pfam PF01032 FecCD transport family 11 313 6.6E-68 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_26005 94eb351ec24aa97e5a6f06b5047923e1 413 Gene3D G3DSA:3.40.50.300 151 384 2.5E-20 T 11-10-2018 AL538_26005 94eb351ec24aa97e5a6f06b5047923e1 413 SUPERFAMILY SSF52540 152 372 4.08E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26005 94eb351ec24aa97e5a6f06b5047923e1 413 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 156 365 3.3E-7 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_26005 94eb351ec24aa97e5a6f06b5047923e1 413 Gene3D G3DSA:3.40.50.2300 20 144 1.7E-5 T 11-10-2018 AL538_24575 5355a659b2072938f1e45524d06d7813 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 425 1.6E-52 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24575 5355a659b2072938f1e45524d06d7813 461 PIRSF PIRSF006603 6 460 1.9E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24575 5355a659b2072938f1e45524d06d7813 461 Pfam PF01554 MatE 252 414 4.4E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_24575 5355a659b2072938f1e45524d06d7813 461 Pfam PF01554 MatE 28 188 1.2E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_15535 bc505f3a9a234eaa754a9138172483ca 721 Gene3D G3DSA:1.50.10.100 10 352 2.6E-91 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_15535 bc505f3a9a234eaa754a9138172483ca 721 Pfam PF07940 Heparinase II/III-like protein 361 633 8.6E-22 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 AL538_15535 bc505f3a9a234eaa754a9138172483ca 721 SUPERFAMILY SSF48230 41 305 2.11E-47 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_15535 bc505f3a9a234eaa754a9138172483ca 721 Pfam PF05426 Alginate lyase 75 267 1.4E-13 T 11-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AL538_15535 bc505f3a9a234eaa754a9138172483ca 721 Gene3D G3DSA:2.70.98.70 355 721 2.7E-99 T 11-10-2018 AL538_09480 a8d62e167f2508e26702df4d51410496 229 Pfam PF11355 Protein of unknown function (DUF3157) 22 228 3.4E-65 T 11-10-2018 IPR021501 Protein of unknown function DUF3157 AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 1.1E-22 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 SUPERFAMILY SSF47616 164 312 8.63E-37 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 SUPERFAMILY SSF52833 31 150 2.24E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.5E-12 T 11-10-2018 AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 Gene3D G3DSA:1.20.1050.10 167 314 3.2E-70 T 11-10-2018 AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 PIRSF PIRSF015753 5 312 1.7E-135 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AL538_04060 f8945ef46c65b242fb3afa3ae1cf3155 314 Gene3D G3DSA:3.40.30.130 10 165 4.0E-61 T 11-10-2018 AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 Gene3D G3DSA:3.40.50.300 1 322 8.0E-98 T 11-10-2018 AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 SUPERFAMILY SSF52540 32 302 7.88E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 Pfam PF00005 ABC transporter 25 181 2.7E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 SMART SM00382 33 239 5.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 6.2E-24 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.1E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_04070 402c1d997c4b519e491d6a80bdda0d70 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_12615 4c1f7bcec90c5c739c6e15f1c630dee4 158 Pfam PF04002 RadC-like JAB domain 40 156 3.8E-42 T 11-10-2018 IPR025657 RadC-like JAB domain AL538_12615 4c1f7bcec90c5c739c6e15f1c630dee4 158 SUPERFAMILY SSF102712 43 127 7.32E-7 T 11-10-2018 AL538_12615 4c1f7bcec90c5c739c6e15f1c630dee4 158 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL538_12615 4c1f7bcec90c5c739c6e15f1c630dee4 158 TIGRFAM TIGR00608 radc: DNA repair protein RadC 24 158 2.8E-43 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL538_12615 4c1f7bcec90c5c739c6e15f1c630dee4 158 Gene3D G3DSA:3.40.140.10 37 158 1.0E-40 T 11-10-2018 AL538_03525 dc6c5bb013c984707abd98d8b1a61e77 298 SUPERFAMILY SSF53686 9 295 1.61E-53 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_03525 dc6c5bb013c984707abd98d8b1a61e77 298 PIRSF PIRSF006278 2 296 9.1E-24 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL538_03525 dc6c5bb013c984707abd98d8b1a61e77 298 Gene3D G3DSA:3.40.50.1100 33 137 2.7E-23 T 11-10-2018 AL538_03525 dc6c5bb013c984707abd98d8b1a61e77 298 Gene3D G3DSA:3.40.50.1100 14 284 2.7E-23 T 11-10-2018 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 1.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 1.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 SUPERFAMILY SSF46689 214 264 5.82E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 SMART SM00342 179 261 6.6E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 Gene3D G3DSA:1.10.10.60 160 269 9.2E-21 T 11-10-2018 AL538_19230 a350eb21dfe3149bba6dc5b6249ae6a6 269 Pfam PF12833 Helix-turn-helix domain 188 262 1.6E-10 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 Gene3D G3DSA:3.30.20.10 178 248 6.1E-77 T 11-10-2018 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 Pfam PF00182 Chitinase class I 106 325 1.2E-30 T 11-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 SMART SM00495 436 478 1.1E-17 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 SMART SM00495 516 561 0.63 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 SUPERFAMILY SSF53955 87 350 1.32E-53 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 SUPERFAMILY SSF51055 430 479 2.49E-16 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 Gene3D G3DSA:2.10.10.20 434 480 3.7E-15 T 11-10-2018 AL538_12460 b5f39809c032610fe15fc0cb095ac224 564 Gene3D G3DSA:1.10.530.10 105 346 6.1E-77 T 11-10-2018 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 3.9E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 3.9E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 3.9E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 238 5.1E-95 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 229 3.5E-45 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 SUPERFAMILY SSF56534 3 235 2.35E-95 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AL538_22960 e33f569a4ad281855b1a1a2a80304d58 264 Gene3D G3DSA:1.10.800.10 1 264 1.3E-94 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 SMART SM00387 32 189 4.2E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Gene3D G3DSA:3.40.50.11260 410 500 2.6E-33 T 11-10-2018 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 4.8E-13 T 11-10-2018 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 SUPERFAMILY SSF110942 520 632 2.48E-33 T 11-10-2018 IPR037196 HSP90, C-terminal domain AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 SUPERFAMILY SSF54211 238 493 2.73E-97 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PIRSF PIRSF002583 1 634 2.6E-210 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 2.7E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Pfam PF00183 Hsp90 protein 226 632 2.0E-126 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 SUPERFAMILY SSF55874 10 216 1.96E-63 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Gene3D G3DSA:1.20.120.790 501 632 1.1E-41 T 11-10-2018 IPR037196 HSP90, C-terminal domain AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Gene3D G3DSA:3.30.230.80 237 409 8.1E-70 T 11-10-2018 AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Gene3D G3DSA:3.30.565.10 6 219 2.1E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_13625 b74c15bcb9574c130c2fb980e82cf31f 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.032 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AL538_25395 abc962e6fd8ca23f95cc9adcc396541a 215 SUPERFAMILY SSF52833 5 84 1.52E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25395 abc962e6fd8ca23f95cc9adcc396541a 215 SUPERFAMILY SSF47616 83 201 2.33E-13 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_25395 abc962e6fd8ca23f95cc9adcc396541a 215 Gene3D G3DSA:3.40.30.10 6 195 1.8E-54 T 11-10-2018 AL538_25395 abc962e6fd8ca23f95cc9adcc396541a 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 1.0E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_25395 abc962e6fd8ca23f95cc9adcc396541a 215 Gene3D G3DSA:1.20.1050.10 84 191 1.8E-54 T 11-10-2018 AL538_14205 b7a582878d31959f20ca5cd897015da0 997 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 149 436 2.2E-70 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL538_14205 b7a582878d31959f20ca5cd897015da0 997 SUPERFAMILY SSF55486 286 359 7.74E-7 T 11-10-2018 AL538_14205 b7a582878d31959f20ca5cd897015da0 997 ProSitePatterns PS00018 EF-hand calcium-binding domain. 248 260 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AL538_14205 b7a582878d31959f20ca5cd897015da0 997 PIRSF PIRSF036597 3 996 0.0 T 11-10-2018 IPR012045 Peptidase M6, unassigned InhA-related AL538_14205 b7a582878d31959f20ca5cd897015da0 997 SMART SM00089 780 872 9.9E-4 T 11-10-2018 IPR022409 PKD/Chitinase domain AL538_14205 b7a582878d31959f20ca5cd897015da0 997 Gene3D G3DSA:2.60.40.10 786 870 1.7E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_14205 b7a582878d31959f20ca5cd897015da0 997 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 975 995 4.7E-4 T 11-10-2018 IPR020008 GlyGly-CTERM domain AL538_14205 b7a582878d31959f20ca5cd897015da0 997 Pfam PF05547 Immune inhibitor A peptidase M6 165 404 2.3E-17 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 AL538_14205 b7a582878d31959f20ca5cd897015da0 997 SUPERFAMILY SSF49299 776 874 2.59E-7 T 11-10-2018 IPR035986 PKD domain superfamily AL538_03875 4f697febe6cb800b77e90c1318c9ebce 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.527 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL538_03875 4f697febe6cb800b77e90c1318c9ebce 338 Pfam PF02618 YceG-like family 43 328 4.7E-83 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL538_03875 4f697febe6cb800b77e90c1318c9ebce 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 8.4E-101 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AL538_03875 4f697febe6cb800b77e90c1318c9ebce 338 Gene3D G3DSA:3.30.160.60 73 110 3.0E-6 T 11-10-2018 AL538_03875 4f697febe6cb800b77e90c1318c9ebce 338 Gene3D G3DSA:3.30.160.60 302 338 7.6E-18 T 11-10-2018 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 266 1.0E-44 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 Pfam PF02567 Phenazine biosynthesis-like protein 8 262 6.4E-66 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 PIRSF PIRSF016184 1 266 1.5E-52 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 Gene3D G3DSA:3.10.310.10 116 254 9.7E-87 T 11-10-2018 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 Gene3D G3DSA:3.10.310.10 6 262 9.7E-87 T 11-10-2018 AL538_17880 701773d79b5bae1d50e51d0fd8a2011d 266 SUPERFAMILY SSF54506 1 264 3.32E-70 T 11-10-2018 AL538_21995 3714ea647d34319c5a694f5aa630843d 311 SUPERFAMILY SSF101478 4 302 7.85E-41 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AL538_21995 3714ea647d34319c5a694f5aa630843d 311 Pfam PF03747 ADP-ribosylglycohydrolase 11 286 2.6E-50 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 AL538_21995 3714ea647d34319c5a694f5aa630843d 311 Gene3D G3DSA:1.10.4080.10 3 310 2.5E-31 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily AL538_26105 1208491e4c70bcf1386dab407d792b66 249 SUPERFAMILY SSF69572 4 249 1.83E-85 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AL538_26105 1208491e4c70bcf1386dab407d792b66 249 Pfam PF00899 ThiF family 12 245 2.1E-64 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AL538_26105 1208491e4c70bcf1386dab407d792b66 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.4E-133 T 11-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 AL538_26105 1208491e4c70bcf1386dab407d792b66 249 Gene3D G3DSA:3.40.50.720 4 249 5.4E-87 T 11-10-2018 AL538_18940 29fbac7fdf4175bc6897fd204fbebfb5 146 Pfam PF03610 PTS system fructose IIA component 4 116 5.7E-28 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AL538_18940 29fbac7fdf4175bc6897fd204fbebfb5 146 Gene3D G3DSA:3.40.50.510 1 143 1.9E-34 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AL538_18940 29fbac7fdf4175bc6897fd204fbebfb5 146 SUPERFAMILY SSF53062 1 126 4.06E-33 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Gene3D G3DSA:3.30.460.30 1 156 2.3E-55 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.8E-143 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.4E-49 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 8.6E-24 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 PIRSF PIRSF000445 1 418 1.4E-156 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 SUPERFAMILY SSF69075 315 416 5.89E-29 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 3.1E-49 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Gene3D G3DSA:3.40.50.720 159 311 1.5E-44 T 11-10-2018 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.568 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 SUPERFAMILY SSF51735 160 313 2.37E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_13265 d72e0ca0814d0949c09d58b421cbffd5 418 SUPERFAMILY SSF69742 1 156 6.8E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 Pfam PF00672 HAMP domain 308 357 7.4E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 Gene3D G3DSA:3.30.450.20 140 283 9.2E-18 T 11-10-2018 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 Gene3D G3DSA:1.10.287.950 306 638 7.4E-78 T 11-10-2018 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 SMART SM00304 307 361 7.9E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 SUPERFAMILY SSF58104 329 638 6.02E-79 T 11-10-2018 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 SMART SM00283 376 637 5.8E-86 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_17230 847b5f7a8dc77369b743092cba0c6dd6 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 604 3.5E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 Gene3D G3DSA:3.30.300.30 531 655 1.4E-14 T 11-10-2018 AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 SUPERFAMILY SSF56801 36 632 7.98E-124 T 11-10-2018 AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 Pfam PF00501 AMP-binding enzyme 104 532 7.4E-46 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 653 3.0E-238 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_22950 5a4a1b9dc32c841b5dedb9b255724ab4 656 Gene3D G3DSA:3.40.50.12780 72 528 1.5E-57 T 11-10-2018 AL538_08895 a0976e17d32935b5513f188408eff8cc 155 SUPERFAMILY SSF102712 51 125 7.32E-6 T 11-10-2018 AL538_08895 a0976e17d32935b5513f188408eff8cc 155 Gene3D G3DSA:3.40.140.10 34 155 5.7E-44 T 11-10-2018 AL538_08895 a0976e17d32935b5513f188408eff8cc 155 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 105 110 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL538_08895 a0976e17d32935b5513f188408eff8cc 155 Pfam PF04002 RadC-like JAB domain 37 153 4.8E-45 T 11-10-2018 IPR025657 RadC-like JAB domain AL538_08895 a0976e17d32935b5513f188408eff8cc 155 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 155 4.6E-46 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL538_20575 70aa23b4ea8a8d2cecb73113c2639550 267 SMART SM00849 10 209 1.3E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_20575 70aa23b4ea8a8d2cecb73113c2639550 267 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 1.9E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_20575 70aa23b4ea8a8d2cecb73113c2639550 267 SUPERFAMILY SSF56281 8 227 1.14E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_20575 70aa23b4ea8a8d2cecb73113c2639550 267 Gene3D G3DSA:3.60.15.10 2 232 4.5E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_19090 d1c30637261fab2f603a4f993171f1ed 158 SUPERFAMILY SSF55804 5 152 9.68E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_19090 d1c30637261fab2f603a4f993171f1ed 158 Gene3D G3DSA:3.40.930.10 1 157 2.4E-49 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_19090 d1c30637261fab2f603a4f993171f1ed 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 2.7E-35 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_19090 d1c30637261fab2f603a4f993171f1ed 158 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_10165 f895b62fc05aa203460ce47089e07166 463 SMART SM00729 58 278 4.7E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_10165 f895b62fc05aa203460ce47089e07166 463 Pfam PF04055 Radical SAM superfamily 63 234 1.9E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_10165 f895b62fc05aa203460ce47089e07166 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 2.5E-208 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AL538_10165 f895b62fc05aa203460ce47089e07166 463 Pfam PF06969 HemN C-terminal domain 369 437 7.9E-13 T 11-10-2018 IPR010723 HemN, C-terminal AL538_10165 f895b62fc05aa203460ce47089e07166 463 PIRSF PIRSF000167 9 460 6.3E-174 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AL538_10165 f895b62fc05aa203460ce47089e07166 463 SUPERFAMILY SSF102114 12 450 6.93E-145 T 11-10-2018 AL538_10165 f895b62fc05aa203460ce47089e07166 463 Gene3D G3DSA:1.10.10.920 370 463 6.7E-35 T 11-10-2018 AL538_10165 f895b62fc05aa203460ce47089e07166 463 Gene3D G3DSA:3.80.30.20 7 369 1.5E-137 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_24625 ade972ceb6b88e5fa1929fe32e91e54d 282 Pfam PF01226 Formate/nitrite transporter 9 258 1.9E-57 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL538_24625 ade972ceb6b88e5fa1929fe32e91e54d 282 Gene3D G3DSA:1.20.1080.10 2 251 8.3E-62 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_07260 6e865a7d0a59667d8829f4a6d1f8270d 132 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 3.7E-20 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AL538_07260 6e865a7d0a59667d8829f4a6d1f8270d 132 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 6.3E-21 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AL538_22930 2675c2714b60f13d742eab13844e8d52 300 SUPERFAMILY SSF103481 51 142 8.11E-7 T 11-10-2018 AL538_22930 2675c2714b60f13d742eab13844e8d52 300 SUPERFAMILY SSF103481 192 290 9.81E-9 T 11-10-2018 AL538_22930 2675c2714b60f13d742eab13844e8d52 300 Pfam PF00892 EamA-like transporter family 160 287 2.8E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_22930 2675c2714b60f13d742eab13844e8d52 300 Pfam PF00892 EamA-like transporter family 10 139 1.5E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_09305 818188cedc3493fe430dce0a4047e71d 386 SUPERFAMILY SSF103473 2 372 8.5E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_09305 818188cedc3493fe430dce0a4047e71d 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 368 1.7E-72 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL538_09305 818188cedc3493fe430dce0a4047e71d 386 Pfam PF07690 Major Facilitator Superfamily 6 341 2.3E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_09305 818188cedc3493fe430dce0a4047e71d 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_09305 818188cedc3493fe430dce0a4047e71d 386 Gene3D G3DSA:1.20.1720.10 1 374 5.5E-89 T 11-10-2018 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Gene3D G3DSA:3.30.420.10 249 488 9.4E-80 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 266 480 2.0E-98 T 11-10-2018 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 SUPERFAMILY SSF46689 175 248 2.15E-23 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 SUPERFAMILY SSF46689 75 167 5.11E-25 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Pfam PF02316 Mu DNA-binding domain 8 104 1.4E-14 T 11-10-2018 IPR003314 Mu-type HTH domain GO:0003677 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Pfam PF02914 Bacteriophage Mu transposase 258 473 9.6E-106 T 11-10-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Gene3D G3DSA:1.10.10.60 75 162 1.1E-23 T 11-10-2018 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 SUPERFAMILY SSF46955 2 68 5.86E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_27105 552588c6bba174c1cbae75bce05185ff 664 SUPERFAMILY SSF50610 482 560 7.32E-19 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal AL538_27105 552588c6bba174c1cbae75bce05185ff 664 SUPERFAMILY SSF53098 260 480 5.31E-77 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Gene3D G3DSA:1.10.10.10 1 73 4.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Gene3D G3DSA:1.10.10.60 179 243 1.1E-24 T 11-10-2018 AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Gene3D G3DSA:2.30.30.130 493 560 2.2E-24 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Pfam PF09039 Mu DNA binding, I gamma subdomain 146 257 5.2E-41 T 11-10-2018 IPR015126 Mu DNA binding, I gamma subdomain AL538_27105 552588c6bba174c1cbae75bce05185ff 664 Pfam PF09299 Mu transposase, C-terminal 488 557 3.4E-15 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 971 1179 9.0E-7 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1195 22.861 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Gene3D G3DSA:1.10.3170.10 158 350 1.2E-158 T 11-10-2018 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Gene3D G3DSA:1.10.486.10 587 741 1.8E-154 T 11-10-2018 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Gene3D G3DSA:3.90.320.10 903 1201 1.1E-102 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Gene3D G3DSA:3.40.50.300 446 858 1.8E-154 T 11-10-2018 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 437 3.0E-59 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 SUPERFAMILY SSF52540 16 855 2.51E-110 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Gene3D G3DSA:3.40.50.300 10 437 1.2E-158 T 11-10-2018 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 525 827 9.0E-17 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 SUPERFAMILY SSF52980 913 1196 2.2E-87 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_05775 fb39f2c3843d329a3291c80d2674b3e4 1212 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1194 0.0 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AL538_08815 ff870be3ec51732a2e319ae17e52a79b 227 Pfam PF01902 Diphthamide synthase 6 215 1.3E-20 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 AL538_08815 ff870be3ec51732a2e319ae17e52a79b 227 Gene3D G3DSA:3.90.1490.10 147 226 2.2E-5 T 11-10-2018 AL538_08815 ff870be3ec51732a2e319ae17e52a79b 227 SUPERFAMILY SSF52402 4 222 1.75E-53 T 11-10-2018 AL538_08815 ff870be3ec51732a2e319ae17e52a79b 227 Gene3D G3DSA:3.40.50.620 2 145 8.7E-17 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_24965 dbb8f1e34be8b76faab248894fbe310e 125 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 3.0E-17 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL538_24965 dbb8f1e34be8b76faab248894fbe310e 125 SUPERFAMILY SSF101386 3 102 1.87E-15 T 11-10-2018 AL538_24965 dbb8f1e34be8b76faab248894fbe310e 125 Gene3D G3DSA:1.10.287.1080 1 124 1.6E-14 T 11-10-2018 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 Pfam PF03466 LysR substrate binding domain 99 307 1.3E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 SUPERFAMILY SSF46785 10 88 1.98E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 SUPERFAMILY SSF53850 93 308 1.1E-34 T 11-10-2018 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.1E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 Gene3D G3DSA:1.10.10.10 3 91 6.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 Gene3D G3DSA:3.40.190.10 183 281 3.2E-45 T 11-10-2018 AL538_18555 cf2276fef5c66b4d49e3051530561c99 312 Gene3D G3DSA:3.40.190.10 95 305 3.2E-45 T 11-10-2018 AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 Gene3D G3DSA:2.60.40.10 158 248 2.2E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 Gene3D G3DSA:2.60.40.10 258 350 5.3E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 SUPERFAMILY SSF51055 458 509 2.16E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 Gene3D G3DSA:2.60.40.10 352 448 1.9E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 Gene3D G3DSA:2.10.10.20 456 509 1.3E-12 T 11-10-2018 AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 Pfam PF14600 Cellulose-binding domain 456 509 6.2E-14 T 11-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AL538_27355 bf8397ef840fbd417fe5cf015a51283b 1207 SMART SM00495 464 505 8.8E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.2E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 SUPERFAMILY SSF51735 2 270 1.36E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 Pfam PF00106 short chain dehydrogenase 3 187 1.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 Gene3D G3DSA:3.40.50.720 2 267 1.1E-58 T 11-10-2018 AL538_13565 1be130a71c0793adf3e676abf2dc4c75 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 Pfam PF00005 ABC transporter 18 165 2.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 SUPERFAMILY SSF52540 1 220 2.66E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 8.5E-90 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 SMART SM00382 27 214 4.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_08990 ee7e2fe7b9d150d74a981f5db1f2f1a3 224 Gene3D G3DSA:3.40.50.300 1 223 2.8E-61 T 11-10-2018 AL538_22395 6c0c139ebdce065f4d4c5c247fbd4c01 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 4.2E-76 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_22395 6c0c139ebdce065f4d4c5c247fbd4c01 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 4.0E-78 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_22395 6c0c139ebdce065f4d4c5c247fbd4c01 218 SUPERFAMILY SSF55821 10 213 4.58E-81 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL538_22395 6c0c139ebdce065f4d4c5c247fbd4c01 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.139 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_22395 6c0c139ebdce065f4d4c5c247fbd4c01 218 Gene3D G3DSA:3.90.870.10 6 218 7.2E-88 T 11-10-2018 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 401 38.204 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 9.3E-137 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.4E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.4E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.4E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.4E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 SMART SM00864 13 205 8.2E-113 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 SUPERFAMILY SSF55307 204 320 6.87E-43 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 Gene3D G3DSA:3.40.50.1440 5 220 2.5E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 SMART SM00865 207 325 1.9E-56 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 SUPERFAMILY SSF52490 13 208 8.5E-70 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AL538_11660 ecdeabccf1b2177d25af3c3b293ca013 414 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.1E-40 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 SUPERFAMILY SSF46785 1 82 2.41E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 Gene3D G3DSA:3.40.190.290 91 291 7.8E-43 T 11-10-2018 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 SUPERFAMILY SSF53850 88 289 1.61E-31 T 11-10-2018 AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 Pfam PF03466 LysR substrate binding domain 87 288 7.4E-29 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 Gene3D G3DSA:1.10.10.10 1 90 4.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01260 1c22e467425aeeb86302b326fd4eba90 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 Gene3D G3DSA:3.40.50.2300 183 312 3.5E-20 T 11-10-2018 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 SUPERFAMILY SSF52172 184 310 4.41E-20 T 11-10-2018 IPR011006 CheY-like superfamily AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 Gene3D G3DSA:2.40.50.180 39 158 9.8E-27 T 11-10-2018 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 SMART SM00260 17 158 3.7E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 PIRSF PIRSF002867 1 312 1.5E-104 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 SMART SM00448 184 305 7.9E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 SUPERFAMILY SSF50341 16 163 1.12E-32 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 Pfam PF01584 CheW-like domain 21 160 4.2E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 Pfam PF00072 Response regulator receiver domain 186 303 2.5E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03820 603b308700b5d8c16ad27acd96d1728c 315 Gene3D G3DSA:2.30.30.40 24 152 9.8E-27 T 11-10-2018 AL538_18950 204f21ade50e94a1d94782318091c654 258 Pfam PF03609 PTS system sorbose-specific iic component 5 236 1.5E-72 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 AL538_06875 d12775a0434dfeafd5464f5f68b8104b 98 SUPERFAMILY SSF102829 6 95 6.15E-24 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AL538_06875 d12775a0434dfeafd5464f5f68b8104b 98 Gene3D G3DSA:1.10.20.30 1 47 7.5E-19 T 11-10-2018 AL538_06875 d12775a0434dfeafd5464f5f68b8104b 98 Pfam PF05164 Cell division protein ZapA 6 89 3.5E-19 T 11-10-2018 IPR007838 Cell division protein ZapA-like AL538_09785 941653cf762deaa9d49eb62615da849a 175 Pfam PF12724 Flavodoxin domain 5 153 1.7E-50 T 11-10-2018 IPR026816 Flavodoxin domain AL538_09785 941653cf762deaa9d49eb62615da849a 175 SUPERFAMILY SSF52218 3 158 1.1E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_09785 941653cf762deaa9d49eb62615da849a 175 Gene3D G3DSA:3.40.50.360 2 109 3.5E-12 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_14500 5c5c1079c03fbb24c40ea36eae0f7677 483 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 405 3.2E-56 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_14500 5c5c1079c03fbb24c40ea36eae0f7677 483 Pfam PF01554 MatE 243 402 1.6E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_14500 5c5c1079c03fbb24c40ea36eae0f7677 483 Pfam PF01554 MatE 29 184 7.1E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_14500 5c5c1079c03fbb24c40ea36eae0f7677 483 PIRSF PIRSF006603 2 445 2.8E-76 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_11330 932657c55cdef9e6b34fe38f6b27ab01 176 SUPERFAMILY SSF158668 4 170 1.44E-57 T 11-10-2018 IPR038026 MtlR-like superfamily AL538_11330 932657c55cdef9e6b34fe38f6b27ab01 176 Gene3D G3DSA:1.20.120.330 1 172 3.1E-71 T 11-10-2018 AL538_11330 932657c55cdef9e6b34fe38f6b27ab01 176 Pfam PF05068 Mannitol repressor 7 170 5.6E-61 T 11-10-2018 IPR007761 Mannitol repressor MtlR-like AL538_23365 ba241550874b68898688b1f4f7a33ac5 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 2.7E-179 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_23365 ba241550874b68898688b1f4f7a33ac5 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 3.6E-218 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_06140 b32ab64f255a6a3cd52a8bdef8baba80 448 Pfam PF01554 MatE 15 176 9.2E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_06140 b32ab64f255a6a3cd52a8bdef8baba80 448 Pfam PF01554 MatE 240 398 1.8E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_06140 b32ab64f255a6a3cd52a8bdef8baba80 448 PIRSF PIRSF006603 1 442 3.6E-68 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_06140 b32ab64f255a6a3cd52a8bdef8baba80 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 5.5E-51 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_12865 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12865 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.7E-58 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12865 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12865 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12865 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 1 156 1.9E-64 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 6.4E-27 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 4.8E-25 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 SUPERFAMILY SSF53686 15 366 2.49E-106 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Gene3D G3DSA:3.40.1020.10 339 515 5.8E-72 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 2.2E-83 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 SUPERFAMILY SSF55021 421 514 7.1E-27 T 11-10-2018 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Gene3D G3DSA:3.40.50.1100 26 328 4.4E-133 T 11-10-2018 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 SUPERFAMILY SSF55021 338 424 2.52E-27 T 11-10-2018 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 Gene3D G3DSA:3.40.50.1100 62 158 4.4E-133 T 11-10-2018 AL538_09555 6ecab34b2fb0841236eb9e4690e4bee9 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 3.6E-249 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AL538_27265 a27242aa50abd5339a7a28744cb89eae 142 Pfam PF07030 Protein of unknown function (DUF1320) 2 121 7.4E-34 T 11-10-2018 IPR009752 Bacteriophage Mu, Gp36 AL538_20385 025cc14183b42795d8ef817f3e65d54b 365 Pfam PF00589 Phage integrase family 128 300 1.9E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_20385 025cc14183b42795d8ef817f3e65d54b 365 Gene3D G3DSA:1.10.150.130 5 109 1.3E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_20385 025cc14183b42795d8ef817f3e65d54b 365 SUPERFAMILY SSF56349 9 304 2.94E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_20385 025cc14183b42795d8ef817f3e65d54b 365 Gene3D G3DSA:1.10.443.10 110 314 3.3E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_00325 5d0571725d01d0fd063b42947449fb5a 344 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 316 1.8E-101 T 11-10-2018 IPR010148 CRISPR-associated protein, CT1975 AL538_00325 5d0571725d01d0fd063b42947449fb5a 344 Pfam PF09344 CT1975-like protein 5 325 3.3E-103 T 11-10-2018 IPR010148 CRISPR-associated protein, CT1975 AL538_25050 918263a94aeb6ce58fc6ed8e346add2f 443 SUPERFAMILY SSF103473 15 437 9.02E-27 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_25050 918263a94aeb6ce58fc6ed8e346add2f 443 Pfam PF07690 Major Facilitator Superfamily 22 382 2.8E-8 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_25050 918263a94aeb6ce58fc6ed8e346add2f 443 Gene3D G3DSA:1.20.1250.20 14 435 4.9E-17 T 11-10-2018 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 SMART SM00283 401 662 5.9E-76 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 SMART SM00304 334 386 8.6E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 1.9E-5 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 1.9E-5 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 SUPERFAMILY SSF58104 354 663 6.93E-73 T 11-10-2018 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 6.0E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_14520 4642c89fef2e52cdc094b88d3aed092a 663 Gene3D G3DSA:1.10.287.950 333 663 9.0E-71 T 11-10-2018 AL538_16520 06c5cc94894ce1a3be492513b359b4cc 255 Pfam PF03741 Integral membrane protein TerC family 16 203 2.5E-44 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL538_15545 aa1996466e6a33a5c218e0f7cc1b7156 111 Pfam PF07883 Cupin domain 35 93 5.5E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL538_15545 aa1996466e6a33a5c218e0f7cc1b7156 111 PIRSF PIRSF029883 3 111 1.1E-31 T 11-10-2018 IPR025499 Pectin degradation protein KdgF AL538_15545 aa1996466e6a33a5c218e0f7cc1b7156 111 SUPERFAMILY SSF51182 2 110 2.97E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_15545 aa1996466e6a33a5c218e0f7cc1b7156 111 Gene3D G3DSA:2.60.120.10 1 111 9.4E-32 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 Gene3D G3DSA:3.90.870.10 1 205 4.7E-90 T 11-10-2018 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 SUPERFAMILY SSF142695 205 367 3.4E-48 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 SUPERFAMILY SSF55821 3 202 1.58E-87 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 Gene3D G3DSA:3.40.50.10990 206 368 3.6E-32 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 7.0E-77 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 Pfam PF00925 GTP cyclohydrolase II 207 367 3.2E-40 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.9 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.4E-85 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AL538_12860 ba96d55bb547946b494a94a726aa7d6d 369 PIRSF PIRSF001259 3 369 4.2E-132 T 11-10-2018 AL538_00465 55882a96b2d9830a9af2084c59245adc 490 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 435 468 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL538_00465 55882a96b2d9830a9af2084c59245adc 490 Gene3D G3DSA:3.55.50.30 18 94 4.3E-6 T 11-10-2018 AL538_00465 55882a96b2d9830a9af2084c59245adc 490 Pfam PF00263 Bacterial type II and III secretion system protein 331 489 1.2E-21 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_05090 aac754bf8eaa54a1d66bba0190325aa4 104 SUPERFAMILY SSF54909 3 97 1.44E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_05090 aac754bf8eaa54a1d66bba0190325aa4 104 Pfam PF07978 NIPSNAP 5 96 4.9E-7 T 11-10-2018 IPR012577 NIPSNAP AL538_05090 aac754bf8eaa54a1d66bba0190325aa4 104 Gene3D G3DSA:3.30.70.100 2 103 3.9E-10 T 11-10-2018 AL538_00860 739fb54181ccd29ea40733c55e184d15 180 Pfam PF07126 Cell-division protein ZapC 1 168 7.2E-64 T 11-10-2018 IPR009809 Cell division protein ZapC AL538_00860 739fb54181ccd29ea40733c55e184d15 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 35.806 T 11-10-2018 IPR009809 Cell division protein ZapC AL538_00860 739fb54181ccd29ea40733c55e184d15 180 PIRSF PIRSF010252 1 178 3.9E-69 T 11-10-2018 IPR009809 Cell division protein ZapC AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 SUPERFAMILY SSF47928 3 108 1.44E-15 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 6.5E-40 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 4.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 4.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 4.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 4.5E-23 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 178 2.4E-34 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 140 159 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 Gene3D G3DSA:1.10.520.20 2 109 1.2E-25 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23155 c15d28e67d7f7e4c0b790673a7a9d790 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 17.724 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 Pfam PF01235 Sodium:alanine symporter family 54 449 3.0E-138 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_01465 764216f345b20da8f2f9a5b691d14a4a 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.7E-151 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_12410 3ca323e53950415f2ef274913e99be11 422 Pfam PF03129 Anticodon binding domain 329 420 4.5E-11 T 11-10-2018 IPR004154 Anticodon-binding AL538_12410 3ca323e53950415f2ef274913e99be11 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.8E-46 T 11-10-2018 AL538_12410 3ca323e53950415f2ef274913e99be11 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.791 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL538_12410 3ca323e53950415f2ef274913e99be11 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 5.5E-158 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AL538_12410 3ca323e53950415f2ef274913e99be11 422 Gene3D G3DSA:3.40.50.800 326 421 5.5E-25 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AL538_12410 3ca323e53950415f2ef274913e99be11 422 SUPERFAMILY SSF52954 327 421 1.18E-26 T 11-10-2018 AL538_12410 3ca323e53950415f2ef274913e99be11 422 PIRSF PIRSF001549 2 422 9.5E-125 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AL538_12410 3ca323e53950415f2ef274913e99be11 422 Gene3D G3DSA:3.30.930.10 2 323 1.9E-119 T 11-10-2018 AL538_12410 3ca323e53950415f2ef274913e99be11 422 SUPERFAMILY SSF55681 4 320 1.65E-103 T 11-10-2018 AL538_02840 3beb0bb106be4f3d1ff6ce0ddb5dd37a 276 Pfam PF11185 Protein of unknown function (DUF2971) 110 208 1.3E-8 T 11-10-2018 IPR021352 Protein of unknown function DUF2971 AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 PIRSF PIRSF000709 1 172 8.9E-5 T 11-10-2018 AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 2.7E-49 T 11-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 Gene3D G3DSA:3.40.50.1240 1 204 8.6E-59 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 6.1E-37 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 SUPERFAMILY SSF53254 1 185 4.07E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_01940 7d4384d1f4c158faa1c8da7b18ed23c4 204 SMART SM00855 5 154 8.5E-11 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL538_08560 6863284abc04c99aaace43f37c131ddb 447 Gene3D G3DSA:1.20.1740.10 1 441 1.0E-57 T 11-10-2018 AL538_08560 6863284abc04c99aaace43f37c131ddb 447 PIRSF PIRSF006060 1 445 9.3E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_08560 6863284abc04c99aaace43f37c131ddb 447 Pfam PF13520 Amino acid permease 8 421 1.6E-37 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_16770 364634698a48b1062b821f2c0780be50 475 PIRSF PIRSF006060 8 475 3.5E-57 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_16770 364634698a48b1062b821f2c0780be50 475 Gene3D G3DSA:1.20.1740.10 8 471 1.3E-43 T 11-10-2018 AL538_16770 364634698a48b1062b821f2c0780be50 475 Pfam PF13520 Amino acid permease 11 448 3.8E-59 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_12605 2f2d4ed3dcd77b34b03194c31d2c241d 146 Pfam PF10980 Protein of unknown function (DUF2787) 21 144 4.7E-43 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_12605 2f2d4ed3dcd77b34b03194c31d2c241d 146 Gene3D G3DSA:3.10.450.430 6 146 2.9E-54 T 11-10-2018 AL538_24395 9e0acd122cd77dac561ecf611937e156 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 2.0E-154 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL538_24395 9e0acd122cd77dac561ecf611937e156 483 SUPERFAMILY SSF52540 6 241 3.63E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24395 9e0acd122cd77dac561ecf611937e156 483 Gene3D G3DSA:3.40.50.880 266 451 1.5E-20 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_24395 9e0acd122cd77dac561ecf611937e156 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 196.407 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AL538_24395 9e0acd122cd77dac561ecf611937e156 483 SUPERFAMILY SSF52317 255 446 3.99E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_24395 9e0acd122cd77dac561ecf611937e156 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 6.6E-23 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL538_24395 9e0acd122cd77dac561ecf611937e156 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 6.8E-58 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AL538_24395 9e0acd122cd77dac561ecf611937e156 483 Gene3D G3DSA:3.40.50.300 6 247 2.4E-55 T 11-10-2018 AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 Gene3D G3DSA:3.40.800.10 1 305 2.0E-104 T 11-10-2018 AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 Pfam PF00491 Arginase family 33 297 1.9E-89 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 PIRSF PIRSF036979 12 304 3.3E-98 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 SUPERFAMILY SSF52768 12 303 6.66E-95 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL538_20565 71081fdc763a9d8fe81bf3d74e40cdbd 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 1.3E-93 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AL538_00615 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:2.30.30.60 140 191 1.2E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_00615 3983b6a008d37057a7a7363870705e93 292 Pfam PF00924 Mechanosensitive ion channel 86 283 1.0E-34 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_00615 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF82689 197 285 7.06E-7 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AL538_00615 3983b6a008d37057a7a7363870705e93 292 SUPERFAMILY SSF50182 125 187 1.63E-14 T 11-10-2018 IPR010920 LSM domain superfamily AL538_00615 3983b6a008d37057a7a7363870705e93 292 Gene3D G3DSA:3.30.70.100 195 286 3.7E-6 T 11-10-2018 AL538_02085 51ed834a3e844ec0807d2aeeb404ca7b 262 Gene3D G3DSA:1.10.357.10 26 216 1.4E-16 T 11-10-2018 AL538_02085 51ed834a3e844ec0807d2aeeb404ca7b 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 81 2.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_02085 51ed834a3e844ec0807d2aeeb404ca7b 262 SUPERFAMILY SSF46689 27 86 5.64E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_02085 51ed834a3e844ec0807d2aeeb404ca7b 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 6.6E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_02085 51ed834a3e844ec0807d2aeeb404ca7b 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 6.6E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_15350 002500bc4ab80716b000ca3396c362a1 751 Gene3D G3DSA:2.170.130.10 41 175 1.1E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_15350 002500bc4ab80716b000ca3396c362a1 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 169 6.8E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_15350 002500bc4ab80716b000ca3396c362a1 751 Gene3D G3DSA:2.40.170.20 188 751 4.7E-112 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_15350 002500bc4ab80716b000ca3396c362a1 751 SUPERFAMILY SSF56935 42 751 9.52E-113 T 11-10-2018 AL538_15350 002500bc4ab80716b000ca3396c362a1 751 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 11-10-2018 IPR010916 TonB box, conserved site AL538_15350 002500bc4ab80716b000ca3396c362a1 751 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 41 751 7.1E-112 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AL538_15350 002500bc4ab80716b000ca3396c362a1 751 Pfam PF00593 TonB dependent receptor 274 749 2.2E-55 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_15350 002500bc4ab80716b000ca3396c362a1 751 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 43 751 3.2E-137 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AL538_25330 0db8ec6735dddff690568fac09dd41e8 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 3.0E-134 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AL538_25330 0db8ec6735dddff690568fac09dd41e8 364 Pfam PF00676 Dehydrogenase E1 component 36 328 9.6E-74 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AL538_25330 0db8ec6735dddff690568fac09dd41e8 364 Gene3D G3DSA:3.40.50.970 1 351 2.4E-99 T 11-10-2018 AL538_25330 0db8ec6735dddff690568fac09dd41e8 364 SUPERFAMILY SSF52518 21 357 4.95E-90 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_03250 7e435f7b552eb5e3fc7cf56d6779f26f 92 SUPERFAMILY SSF54292 7 80 2.88E-17 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_03250 7e435f7b552eb5e3fc7cf56d6779f26f 92 Gene3D G3DSA:3.10.20.30 4 81 1.9E-15 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_03250 7e435f7b552eb5e3fc7cf56d6779f26f 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 2.4E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_03250 7e435f7b552eb5e3fc7cf56d6779f26f 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL538_21690 b4adc0349b76f7054b0281d23aea4fad 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 522 8.0E-14 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_21690 b4adc0349b76f7054b0281d23aea4fad 533 SUPERFAMILY SSF56801 8 531 6.93E-126 T 11-10-2018 AL538_21690 b4adc0349b76f7054b0281d23aea4fad 533 Pfam PF00501 AMP-binding enzyme 26 434 5.2E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_21690 b4adc0349b76f7054b0281d23aea4fad 533 Gene3D G3DSA:3.30.300.310 429 532 2.5E-27 T 11-10-2018 AL538_21690 b4adc0349b76f7054b0281d23aea4fad 533 Gene3D G3DSA:3.40.50.12780 2 428 4.0E-104 T 11-10-2018 AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 474 631 2.5E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 SUPERFAMILY SSF55073 483 631 4.71E-40 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Gene3D G3DSA:3.30.70.270 472 637 1.2E-49 T 11-10-2018 AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Pfam PF17152 Periplasmic sensor domain 45 142 7.9E-10 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 SMART SM00267 467 633 7.4E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 SUPERFAMILY SSF55785 353 466 1.72E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 629 3.9E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 467 7.6E-6 T 11-10-2018 IPR000014 PAS domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Gene3D G3DSA:3.30.450.20 355 468 2.9E-9 T 11-10-2018 AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Pfam PF13426 PAS domain 259 352 0.49 T 11-10-2018 IPR000014 PAS domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 Pfam PF13426 PAS domain 385 466 0.02 T 11-10-2018 IPR000014 PAS domain AL538_23530 4890be724cc0598d4ae6b297dbf7a179 641 SMART SM00304 180 233 0.0046 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 Gene3D G3DSA:3.40.50.300 1 201 4.4E-42 T 11-10-2018 AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 Pfam PF00005 ABC transporter 18 158 2.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 SUPERFAMILY SSF52540 2 193 8.45E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 SMART SM00382 26 205 8.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 2.4E-77 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AL538_04980 8ef6f3246c1d6b192fa8c331b131060b 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_11650 60f04244f2995a5c595498d19db08f3a 261 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.636 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AL538_11650 60f04244f2995a5c595498d19db08f3a 261 Pfam PF03799 Cell division protein FtsQ 127 239 1.9E-23 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AL538_11650 60f04244f2995a5c595498d19db08f3a 261 Pfam PF08478 POTRA domain, FtsQ-type 54 123 4.1E-18 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AL538_11650 60f04244f2995a5c595498d19db08f3a 261 Gene3D G3DSA:3.10.20.310 52 123 1.7E-24 T 11-10-2018 AL538_11650 60f04244f2995a5c595498d19db08f3a 261 Gene3D G3DSA:3.40.50.11690 124 252 3.4E-37 T 11-10-2018 AL538_26990 d6f9218c002fa0d6e8b48f69a33deebe 157 Gene3D G3DSA:3.40.30.10 2 157 1.6E-58 T 11-10-2018 AL538_26990 d6f9218c002fa0d6e8b48f69a33deebe 157 Pfam PF08534 Redoxin 3 154 1.2E-36 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_26990 d6f9218c002fa0d6e8b48f69a33deebe 157 SUPERFAMILY SSF52833 1 156 3.6E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 1.7E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 1.7E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 1.7E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 Pfam PF00797 N-acetyltransferase 24 258 5.0E-66 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 Gene3D G3DSA:2.40.128.150 86 183 3.5E-71 T 11-10-2018 AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 SUPERFAMILY SSF54001 1 257 1.74E-73 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL538_18750 7cfd30a50f661dc866cdf19c76a84a03 265 Gene3D G3DSA:3.30.2140.10 9 255 3.5E-71 T 11-10-2018 AL538_05020 7541a46720e73791cdb2916bd7e5a093 122 SMART SM00448 1 115 1.6E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05020 7541a46720e73791cdb2916bd7e5a093 122 Gene3D G3DSA:3.40.50.2300 1 122 9.8E-40 T 11-10-2018 AL538_05020 7541a46720e73791cdb2916bd7e5a093 122 SUPERFAMILY SSF52172 1 120 1.29E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05020 7541a46720e73791cdb2916bd7e5a093 122 Pfam PF00072 Response regulator receiver domain 3 115 2.0E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 SUPERFAMILY SSF53850 34 535 1.79E-129 T 11-10-2018 AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 Gene3D G3DSA:3.90.76.10 44 216 1.5E-142 T 11-10-2018 AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 Gene3D G3DSA:3.40.190.10 217 526 1.5E-142 T 11-10-2018 AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 454 1.8E-84 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 Gene3D G3DSA:3.10.105.10 296 514 1.5E-142 T 11-10-2018 AL538_15975 060628fd9b2ac9a3078fb8a5fd7e7d43 539 PIRSF PIRSF002741 4 538 6.4E-90 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 SUPERFAMILY SSF46785 6 71 9.24E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 SMART SM00866 92 229 7.7E-8 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 Pfam PF07702 UTRA domain 94 226 8.1E-18 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 Gene3D G3DSA:3.40.1410.10 73 233 2.1E-24 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 Gene3D G3DSA:1.10.10.10 2 72 5.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 SUPERFAMILY SSF64288 57 235 9.42E-27 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 SMART SM00345 6 69 8.5E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 4.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 4.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_00235 067a6f56a60451909a54fbf6fc30338b 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 69 1.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_05035 b847197a54b3923a91d1dd568003332d 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 480 1.4E-38 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_05035 b847197a54b3923a91d1dd568003332d 503 SUPERFAMILY SSF52540 286 478 2.22E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05035 b847197a54b3923a91d1dd568003332d 503 Gene3D G3DSA:1.20.120.1380 264 474 4.6E-57 T 11-10-2018 AL538_05035 b847197a54b3923a91d1dd568003332d 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 141 378 8.6E-70 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AL538_05035 b847197a54b3923a91d1dd568003332d 503 Gene3D G3DSA:3.40.50.300 285 471 4.6E-57 T 11-10-2018 AL538_05035 b847197a54b3923a91d1dd568003332d 503 SMART SM00382 289 442 8.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05035 b847197a54b3923a91d1dd568003332d 503 SMART SM00962 290 483 2.1E-63 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AL538_07720 56810c8e4835aa84321787efb081e046 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 8.6E-53 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AL538_07720 56810c8e4835aa84321787efb081e046 254 SUPERFAMILY SSF56935 42 207 2.81E-6 T 11-10-2018 AL538_10775 9e898a1094eeaada61ebea45b9147e29 80 Gene3D G3DSA:1.20.5.340 1 79 1.4E-28 T 11-10-2018 AL538_10775 9e898a1094eeaada61ebea45b9147e29 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.947 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL538_10775 9e898a1094eeaada61ebea45b9147e29 80 Pfam PF06005 Cell division protein ZapB 1 78 2.5E-24 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 Gene3D G3DSA:3.40.190.10 170 245 7.4E-8 T 11-10-2018 AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 SUPERFAMILY SSF46785 4 84 1.09E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 Gene3D G3DSA:3.40.190.10 108 169 7.4E-8 T 11-10-2018 AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 Gene3D G3DSA:1.10.10.10 1 86 6.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 SUPERFAMILY SSF53850 89 297 1.45E-14 T 11-10-2018 AL538_01480 57f4870d3ecaae75e3820c1150b0cdf6 303 Pfam PF03466 LysR substrate binding domain 112 299 1.5E-9 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_23485 9c3f28ce78257d088fa3c241be2f81c3 404 SUPERFAMILY SSF56059 93 311 4.09E-30 T 11-10-2018 AL538_23485 9c3f28ce78257d088fa3c241be2f81c3 404 Gene3D G3DSA:3.30.470.20 107 403 2.8E-36 T 11-10-2018 AL538_04485 b037a789a3062143f254e800d7fd3b99 402 Pfam PF08708 Primase C terminal 1 (PriCT-1) 180 253 7.7E-15 T 11-10-2018 IPR014820 Primase, C-terminal 1 AL538_04485 b037a789a3062143f254e800d7fd3b99 402 Gene3D G3DSA:1.10.340.50 179 296 1.4E-14 T 11-10-2018 AL538_04485 b037a789a3062143f254e800d7fd3b99 402 Pfam PF03090 Replicase family 32 163 1.5E-46 T 11-10-2018 IPR004322 Plasmid replicase, bacterial AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 4.2E-41 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 2.4E-89 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.382 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 SUPERFAMILY SSF52540 6 204 1.19E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 Gene3D G3DSA:3.40.50.300 3 213 9.0E-61 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 11-10-2018 AL538_03965 128e1726af531a2fd3eed0a9a2b92ec8 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 11-10-2018 AL538_04660 737b7840b830d7e29944991b9021628a 331 Gene3D G3DSA:3.40.50.720 4 326 3.6E-155 T 11-10-2018 AL538_04660 737b7840b830d7e29944991b9021628a 331 SUPERFAMILY SSF55347 149 312 1.59E-77 T 11-10-2018 AL538_04660 737b7840b830d7e29944991b9021628a 331 Gene3D G3DSA:3.30.360.10 149 314 3.6E-155 T 11-10-2018 AL538_04660 737b7840b830d7e29944991b9021628a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 6.4E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.3E-69 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 SMART SM00846 3 150 1.7E-96 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 SUPERFAMILY SSF51735 3 166 7.41E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04660 737b7840b830d7e29944991b9021628a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.9E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.3E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.3E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.3E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.3E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.3E-45 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_04660 737b7840b830d7e29944991b9021628a 331 PIRSF PIRSF000149 1 331 1.3E-134 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 Gene3D G3DSA:3.20.20.70 1 210 1.2E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 SUPERFAMILY SSF51569 4 208 3.11E-69 T 11-10-2018 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 205 1.9E-81 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19690 06f00f90748b3ae6026287edcb02abe5 213 Pfam PF01081 KDPG and KHG aldolase 7 199 3.0E-73 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 SUPERFAMILY SSF53067 223 462 2.33E-19 T 11-10-2018 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 Gene3D G3DSA:3.90.640.10 263 324 2.8E-33 T 11-10-2018 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 SUPERFAMILY SSF53067 6 209 1.19E-29 T 11-10-2018 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 Pfam PF00012 Hsp70 protein 90 321 2.1E-16 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 Gene3D G3DSA:3.30.420.40 8 210 2.8E-33 T 11-10-2018 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 Gene3D G3DSA:3.30.420.40 211 262 2.8E-33 T 11-10-2018 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 Pfam PF12531 DNA-K related protein 691 938 7.4E-102 T 11-10-2018 IPR021030 Protein of unknown function DUF3731 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 PRINTS PR00301 70kDa heat shock protein signature 165 185 3.6E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 PRINTS PR00301 70kDa heat shock protein signature 6 19 3.6E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 PRINTS PR00301 70kDa heat shock protein signature 232 242 3.6E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16645 9ab3dec8e8bb6bdd018d81542434a365 941 PRINTS PR00301 70kDa heat shock protein signature 404 424 3.6E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 Gene3D G3DSA:3.40.50.880 1 301 2.7E-125 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.0E-135 T 11-10-2018 IPR033752 MetA family AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 3.3E-163 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 PIRSF PIRSF000450 1 309 2.6E-148 T 11-10-2018 IPR033752 MetA family AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-128 T 11-10-2018 AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.351 T 11-10-2018 IPR033752 MetA family AL538_16750 6d70bbc29b6cf698e4d84c321f07d49f 313 SUPERFAMILY SSF52317 18 297 3.4E-103 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_02715 44b1e4c257da369737cce57f5646edc6 214 SUPERFAMILY SSF52317 24 198 2.42E-25 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_02715 44b1e4c257da369737cce57f5646edc6 214 Pfam PF03575 Peptidase family S51 5 197 4.8E-41 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AL538_02715 44b1e4c257da369737cce57f5646edc6 214 Gene3D G3DSA:3.40.50.880 14 212 1.1E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 Pfam PF00487 Fatty acid desaturase 46 262 2.0E-20 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PIRSF PIRSF000345 4 333 2.7E-101 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 7.0E-32 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 7.0E-32 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 7.0E-32 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 7.0E-32 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL538_23255 dec9f465b8c77c30a8b88ce7c1081fe9 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 7.0E-32 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 Gene3D G3DSA:3.10.450.350 161 265 5.6E-33 T 11-10-2018 AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 Gene3D G3DSA:2.70.70.10 266 396 3.2E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 Pfam PF01551 Peptidase family M23 296 389 2.1E-32 T 11-10-2018 IPR016047 Peptidase M23 AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 Gene3D G3DSA:3.10.450.350 67 159 5.7E-34 T 11-10-2018 AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 Pfam PF04225 Opacity-associated protein A LysM-like domain 74 155 1.7E-7 T 11-10-2018 IPR007340 Opacity-associated protein A AL538_26290 f8d9e9bd16d6fa6dc00f3948aaf5c846 428 SUPERFAMILY SSF51261 144 391 6.8E-68 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 3.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 3.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 5.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 Gene3D G3DSA:3.40.50.720 1 246 3.2E-72 T 11-10-2018 AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0037 T 11-10-2018 AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 Pfam PF00106 short chain dehydrogenase 13 208 1.2E-53 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_03780 8614b4c8bf56381b00175176a34e8d8c 248 SUPERFAMILY SSF51735 9 242 3.32E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_02755 56b855277640f688b9111e5857b07115 142 Pfam PF13673 Acetyltransferase (GNAT) domain 30 130 6.0E-17 T 11-10-2018 IPR000182 GNAT domain AL538_02755 56b855277640f688b9111e5857b07115 142 SUPERFAMILY SSF55729 2 132 8.64E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_02755 56b855277640f688b9111e5857b07115 142 Gene3D G3DSA:3.40.630.30 1 135 6.0E-34 T 11-10-2018 AL538_05405 02164dac461276c71460b226a053d019 212 Gene3D G3DSA:3.30.420.10 7 212 5.4E-79 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_05405 02164dac461276c71460b226a053d019 212 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 37.645 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AL538_05405 02164dac461276c71460b226a053d019 212 Pfam PF01351 Ribonuclease HII 27 203 2.2E-38 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AL538_05405 02164dac461276c71460b226a053d019 212 SUPERFAMILY SSF53098 19 209 8.35E-71 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 SUPERFAMILY SSF52540 85 363 4.76E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 7.2E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 SMART SM00490 270 351 5.8E-32 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.1E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 SMART SM00487 28 234 1.7E-54 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 Gene3D G3DSA:3.40.50.300 229 394 2.7E-45 T 11-10-2018 AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.712 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AL538_09225 3cb2765d2f971fb37e9227c760fb714f 437 Gene3D G3DSA:3.40.50.300 2 222 3.5E-72 T 11-10-2018 AL538_22730 b7e8b6b3adc8c91753c649f594abd010 137 Pfam PF00472 RF-1 domain 7 132 1.9E-23 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL538_22730 b7e8b6b3adc8c91753c649f594abd010 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AL538_22730 b7e8b6b3adc8c91753c649f594abd010 137 Gene3D G3DSA:3.30.160.20 1 136 6.9E-38 T 11-10-2018 AL538_22730 b7e8b6b3adc8c91753c649f594abd010 137 SUPERFAMILY SSF75620 7 113 6.28E-12 T 11-10-2018 AL538_24745 9386b2c030f19c199e81bbdd4b3d0121 334 Gene3D G3DSA:3.40.640.10 1 243 1.5E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_24745 9386b2c030f19c199e81bbdd4b3d0121 334 Gene3D G3DSA:3.90.1150.10 244 334 2.8E-24 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_24745 9386b2c030f19c199e81bbdd4b3d0121 334 SUPERFAMILY SSF53383 1 332 2.55E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_24745 9386b2c030f19c199e81bbdd4b3d0121 334 Pfam PF01212 Beta-eliminating lyase 2 283 1.5E-100 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AL538_24745 9386b2c030f19c199e81bbdd4b3d0121 334 PIRSF PIRSF017617 1 334 3.2E-134 T 11-10-2018 IPR023603 Threonine aldolase AL538_16940 eb21d448fd6c783b41b64427c3c6b8bc 311 Pfam PF00498 FHA domain 30 94 2.8E-9 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL538_16940 eb21d448fd6c783b41b64427c3c6b8bc 311 SUPERFAMILY SSF49879 9 100 5.59E-14 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AL538_16940 eb21d448fd6c783b41b64427c3c6b8bc 311 Gene3D G3DSA:2.60.200.20 4 116 5.9E-12 T 11-10-2018 AL538_02050 3ac600e8b42c1fcbaba04e76caac242f 241 SUPERFAMILY SSF56300 3 240 3.01E-36 T 11-10-2018 AL538_02050 3ac600e8b42c1fcbaba04e76caac242f 241 Gene3D G3DSA:3.60.21.10 1 241 3.0E-43 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_02050 3ac600e8b42c1fcbaba04e76caac242f 241 Pfam PF00149 Calcineurin-like phosphoesterase 3 188 3.7E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_11895 139f07da084ad62771070cadd1ee94aa 262 SUPERFAMILY SSF52833 123 261 4.97E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_11895 139f07da084ad62771070cadd1ee94aa 262 Gene3D G3DSA:3.10.450.70 38 102 3.7E-19 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AL538_11895 139f07da084ad62771070cadd1ee94aa 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.6E-13 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL538_11895 139f07da084ad62771070cadd1ee94aa 262 Pfam PF13098 Thioredoxin-like domain 131 259 4.0E-24 T 11-10-2018 IPR012336 Thioredoxin-like fold AL538_11895 139f07da084ad62771070cadd1ee94aa 262 Gene3D G3DSA:3.40.30.10 103 262 2.2E-43 T 11-10-2018 AL538_11895 139f07da084ad62771070cadd1ee94aa 262 SUPERFAMILY SSF54423 44 100 1.2E-14 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AL538_24135 55869963812659756e86e6b51b7216ac 416 Gene3D G3DSA:2.40.160.60 22 416 4.3E-126 T 11-10-2018 AL538_24135 55869963812659756e86e6b51b7216ac 416 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 415 3.9E-131 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_24135 55869963812659756e86e6b51b7216ac 416 SUPERFAMILY SSF56935 22 415 4.49E-93 T 11-10-2018 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Gene3D G3DSA:3.40.50.720 93 258 2.5E-113 T 11-10-2018 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.376 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 SUPERFAMILY SSF51735 93 257 5.96E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04845 ed795743801023bd44f7b7400298a0aa 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 3.4E-27 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Gene3D G3DSA:3.40.50.720 1 279 2.5E-113 T 11-10-2018 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Gene3D G3DSA:3.30.1370.170 294 377 1.9E-31 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 5.6E-34 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 SUPERFAMILY SSF52283 1 109 1.96E-23 T 11-10-2018 AL538_04845 ed795743801023bd44f7b7400298a0aa 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 285 1.2E-23 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL538_19670 10a331cdcb10043f92a850ece1918d75 585 Pfam PF00474 Sodium:solute symporter family 34 423 2.6E-43 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_19670 10a331cdcb10043f92a850ece1918d75 585 Gene3D G3DSA:1.20.1730.10 22 461 1.6E-87 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_04625 c1290ec89283eb7627ccbc3cdc9afdd6 182 Pfam PF00881 Nitroreductase family 8 161 6.1E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_04625 c1290ec89283eb7627ccbc3cdc9afdd6 182 PIRSF PIRSF000232 1 182 8.9E-64 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL538_04625 c1290ec89283eb7627ccbc3cdc9afdd6 182 Gene3D G3DSA:3.40.109.10 1 182 2.4E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_04625 c1290ec89283eb7627ccbc3cdc9afdd6 182 SUPERFAMILY SSF55469 1 181 5.23E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 Pfam PF02814 UreE urease accessory protein, N-terminal domain 8 66 2.6E-14 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AL538_19190 36118e29fca65848d7b07f395b806c9b 169 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 20.902 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 169 4.1E-21 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 Gene3D G3DSA:2.60.260.20 1 72 2.3E-21 T 11-10-2018 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 PIRSF PIRSF036402 1 169 1.9E-33 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 Gene3D G3DSA:3.30.70.790 73 148 1.8E-24 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 SUPERFAMILY SSF69737 73 144 5.75E-15 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 AL538_19190 36118e29fca65848d7b07f395b806c9b 169 SUPERFAMILY SSF69287 1 71 1.03E-14 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily AL538_19190 36118e29fca65848d7b07f395b806c9b 169 SMART SM00988 1 66 8.6E-19 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal AL538_26130 047a11a809d4756de00821e13c81136e 431 Gene3D G3DSA:3.10.50.10 312 390 1.4E-118 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_26130 047a11a809d4756de00821e13c81136e 431 SUPERFAMILY SSF51445 19 418 1.79E-79 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_26130 047a11a809d4756de00821e13c81136e 431 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_26130 047a11a809d4756de00821e13c81136e 431 Gene3D G3DSA:3.20.20.80 23 422 1.4E-118 T 11-10-2018 AL538_26130 047a11a809d4756de00821e13c81136e 431 SUPERFAMILY SSF54556 313 387 6.72E-18 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily AL538_26130 047a11a809d4756de00821e13c81136e 431 Pfam PF00704 Glycosyl hydrolases family 18 25 416 1.3E-79 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_26130 047a11a809d4756de00821e13c81136e 431 SMART SM00636 23 416 2.1E-103 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_16460 e63494583e14456335e35ff272bb4409 154 PIRSF PIRSF028065 1 148 2.1E-70 T 11-10-2018 IPR016865 Inner membrane protein RclC AL538_16460 e63494583e14456335e35ff272bb4409 154 Pfam PF04224 Protein of unknown function, DUF417 2 145 1.0E-41 T 11-10-2018 IPR007339 Inner membrane protein RclC-like AL538_03695 77f694371a66f23a90fc87ab787d0488 160 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 19 152 1.9E-13 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AL538_03695 77f694371a66f23a90fc87ab787d0488 160 SUPERFAMILY SSF55961 21 152 1.58E-18 T 11-10-2018 AL538_03695 77f694371a66f23a90fc87ab787d0488 160 Gene3D G3DSA:3.30.530.20 1 155 4.8E-41 T 11-10-2018 IPR023393 START-like domain superfamily AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 Gene3D G3DSA:2.40.33.10 74 172 1.2E-153 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 Gene3D G3DSA:3.20.20.60 6 341 1.2E-153 T 11-10-2018 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 4.5E-29 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 SUPERFAMILY SSF51621 5 344 2.47E-85 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 SUPERFAMILY SSF52935 329 478 2.35E-37 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 SUPERFAMILY SSF50800 74 169 1.62E-26 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 478 1.3E-166 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.4E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 346 3.1E-130 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_03830 22ffaebae0b18ab44860126517ab78b9 480 Gene3D G3DSA:3.40.1380.20 342 476 1.2E-153 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AL538_10315 6698ecea4f7fd7986678b6046d33c143 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_10315 6698ecea4f7fd7986678b6046d33c143 188 SUPERFAMILY SSF55811 4 182 2.17E-40 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_10315 6698ecea4f7fd7986678b6046d33c143 188 Gene3D G3DSA:3.90.79.10 7 188 2.7E-49 T 11-10-2018 AL538_10315 6698ecea4f7fd7986678b6046d33c143 188 Pfam PF00293 NUDIX domain 46 154 4.7E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_20885 0ef514f6df9039f177252874dc379762 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 7.7E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_20885 0ef514f6df9039f177252874dc379762 271 Gene3D G3DSA:3.40.50.1000 8 271 5.4E-97 T 11-10-2018 IPR023214 HAD superfamily AL538_20885 0ef514f6df9039f177252874dc379762 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.267 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL538_20885 0ef514f6df9039f177252874dc379762 271 SUPERFAMILY SSF56784 6 260 1.72E-52 T 11-10-2018 IPR036412 HAD-like superfamily AL538_20885 0ef514f6df9039f177252874dc379762 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 259 6.3E-118 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AL538_20885 0ef514f6df9039f177252874dc379762 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 1.2E-9 T 11-10-2018 AL538_20885 0ef514f6df9039f177252874dc379762 271 Gene3D G3DSA:1.10.150.240 24 102 5.4E-97 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 Pfam PF13710 ACT domain 11 73 3.8E-18 T 11-10-2018 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 11-10-2018 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 8.0E-36 T 11-10-2018 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.6E-62 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 Gene3D G3DSA:3.30.70.1150 80 157 4.6E-28 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 SUPERFAMILY SSF55021 1 75 2.15E-22 T 11-10-2018 AL538_11275 a771dbb9bba24f4ec015a2ea4e412718 164 Gene3D G3DSA:3.30.70.260 1 78 6.7E-33 T 11-10-2018 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 Gene3D G3DSA:3.30.750.170 97 442 8.9E-70 T 11-10-2018 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 SUPERFAMILY SSF52096 262 451 9.28E-29 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 Pfam PF03572 Peptidase family S41 269 414 5.6E-20 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 Gene3D G3DSA:2.30.42.10 149 252 8.9E-70 T 11-10-2018 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 SMART SM00245 239 454 3.9E-4 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 SUPERFAMILY SSF50156 154 236 9.98E-8 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_16740 d23368e6bc41937b86071b2775a6b66d 536 Gene3D G3DSA:3.90.226.10 253 490 8.9E-70 T 11-10-2018 AL538_23570 278ea389adf8896c64dd35b9f9a40354 240 SUPERFAMILY SSF55469 5 237 8.9E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_23570 278ea389adf8896c64dd35b9f9a40354 240 Pfam PF00881 Nitroreductase family 12 217 9.8E-28 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_23570 278ea389adf8896c64dd35b9f9a40354 240 Gene3D G3DSA:3.40.109.10 1 239 9.7E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_25005 50eb26026a63f726cfe4b3708a8b34c9 159 SUPERFAMILY SSF55826 5 146 1.29E-28 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_25005 50eb26026a63f726cfe4b3708a8b34c9 159 Gene3D G3DSA:3.90.960.10 15 155 3.2E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_25005 50eb26026a63f726cfe4b3708a8b34c9 159 Pfam PF04073 Aminoacyl-tRNA editing domain 35 143 8.4E-19 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 Gene3D G3DSA:3.40.50.300 1 232 3.6E-60 T 11-10-2018 AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 SMART SM00382 24 209 8.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 4.2E-100 T 11-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 Pfam PF00005 ABC transporter 18 157 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_11115 8b98121a903ec44ec5b68062a6c98a4b 234 SUPERFAMILY SSF52540 1 231 5.33E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 Pfam PF00313 'Cold-shock' DNA-binding domain 10 73 8.4E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 8 75 2.3E-41 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 41 - T 11-10-2018 IPR019844 Cold-shock conserved site AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 PRINTS PR00050 Cold shock protein signature 32 41 9.6E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 PRINTS PR00050 Cold shock protein signature 11 26 9.6E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 PRINTS PR00050 Cold shock protein signature 47 65 9.6E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 SMART SM00357 10 74 2.9E-24 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 Gene3D G3DSA:2.40.50.140 2 79 9.0E-26 T 11-10-2018 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 PIRSF PIRSF002599 4 79 2.1E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AL538_14745 8c16e8dbc1cfd6487633981e381228d7 79 SUPERFAMILY SSF50249 7 74 4.07E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_25210 1006b98d5db4bffd552802321f757949 305 Gene3D G3DSA:3.40.50.1820 64 302 2.3E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_25210 1006b98d5db4bffd552802321f757949 305 SUPERFAMILY SSF53474 78 302 5.84E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_25210 1006b98d5db4bffd552802321f757949 305 Pfam PF01738 Dienelactone hydrolase family 92 301 2.0E-46 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL538_20515 888784e2de64e5b60ca31696751671b8 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 5.8E-49 T 11-10-2018 IPR019613 Protein of unknown function DUF4198 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 8.0E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.9E-95 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 SUPERFAMILY SSF54292 5 106 7.68E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 SUPERFAMILY SSF46548 107 226 1.73E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 6.9E-33 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 Gene3D G3DSA:1.10.1060.10 107 244 4.1E-50 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 Gene3D G3DSA:3.10.20.30 1 106 1.7E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_08270 c49c0852196c0d7f15fbcacc18ae0d66 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_09745 a36ded7ebba6754b0a92000b8dfb4308 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain AL538_09745 a36ded7ebba6754b0a92000b8dfb4308 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.9 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AL538_09745 a36ded7ebba6754b0a92000b8dfb4308 82 Gene3D G3DSA:3.30.110.40 5 80 1.5E-28 T 11-10-2018 IPR036868 TusA-like domain superfamily AL538_09745 a36ded7ebba6754b0a92000b8dfb4308 82 SUPERFAMILY SSF64307 9 80 6.02E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily AL538_09745 a36ded7ebba6754b0a92000b8dfb4308 82 Pfam PF01206 Sulfurtransferase TusA 10 79 9.6E-23 T 11-10-2018 IPR001455 TusA-like domain AL538_00690 a92230f520e07a2cde9379ddc211e123 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 1.1E-43 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_00690 a92230f520e07a2cde9379ddc211e123 345 SUPERFAMILY SSF53850 24 342 6.92E-94 T 11-10-2018 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.4E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 Gene3D G3DSA:3.40.190.10 29 312 4.8E-122 T 11-10-2018 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 PIRSF PIRSF019574 1 345 1.1E-125 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AL538_00690 a92230f520e07a2cde9379ddc211e123 345 Gene3D G3DSA:3.40.190.10 129 318 4.8E-122 T 11-10-2018 AL538_12430 1ef258b8226698a4596934f2f55ae5de 289 SUPERFAMILY SSF55186 121 274 4.19E-14 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL538_09985 7ef342a57bf1fdbb39816596b4f5c34b 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 457 2.2E-108 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_09985 7ef342a57bf1fdbb39816596b4f5c34b 458 PIRSF PIRSF002746 9 458 2.0E-145 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_09985 7ef342a57bf1fdbb39816596b4f5c34b 458 Pfam PF02447 GntP family permease 14 456 2.3E-119 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_11825 8c549180ec1b87dc286ae0167b15734b 219 SUPERFAMILY SSF52218 1 183 2.85E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_11825 8c549180ec1b87dc286ae0167b15734b 219 Gene3D G3DSA:3.40.50.360 1 199 7.0E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_11825 8c549180ec1b87dc286ae0167b15734b 219 Pfam PF03358 NADPH-dependent FMN reductase 1 150 2.9E-23 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.27 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 70 128 1.29E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 SMART SM01185 69 123 2.8E-26 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.5E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 SUPERFAMILY SSF50249 130 187 8.74E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 66 129 1.9E-29 T 11-10-2018 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 3.1E-77 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.9E-23 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 SMART SM00841 131 186 1.5E-30 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 PIRSF PIRSF005901 2 188 4.3E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AL538_08295 f92389cfd5179c6de1668369f82b43c0 188 Gene3D G3DSA:2.40.50.140 130 188 7.4E-27 T 11-10-2018 AL538_23450 040e33eed68c59a90342b250a259fc87 475 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_23450 040e33eed68c59a90342b250a259fc87 475 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_23450 040e33eed68c59a90342b250a259fc87 475 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_23450 040e33eed68c59a90342b250a259fc87 475 Gene3D G3DSA:1.20.1250.20 6 462 2.0E-129 T 11-10-2018 AL538_23450 040e33eed68c59a90342b250a259fc87 475 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 457 2.1E-108 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_23450 040e33eed68c59a90342b250a259fc87 475 SUPERFAMILY SSF103473 7 459 1.7E-76 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_23450 040e33eed68c59a90342b250a259fc87 475 Pfam PF00083 Sugar (and other) transporter 17 461 7.7E-110 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL538_23450 040e33eed68c59a90342b250a259fc87 475 PRINTS PR00171 Sugar transporter signature 363 384 1.2E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_23450 040e33eed68c59a90342b250a259fc87 475 PRINTS PR00171 Sugar transporter signature 386 398 1.2E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_23450 040e33eed68c59a90342b250a259fc87 475 PRINTS PR00171 Sugar transporter signature 24 34 1.2E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_23450 040e33eed68c59a90342b250a259fc87 475 PRINTS PR00171 Sugar transporter signature 108 127 1.2E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_23450 040e33eed68c59a90342b250a259fc87 475 PRINTS PR00171 Sugar transporter signature 278 288 1.2E-20 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_14690 85148c8e4a64b6d7fc82a4a32628fc4e 225 SUPERFAMILY SSF161098 11 203 1.44E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL538_14690 85148c8e4a64b6d7fc82a4a32628fc4e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 217 2.2E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_14690 85148c8e4a64b6d7fc82a4a32628fc4e 225 Gene3D G3DSA:1.10.3720.10 1 218 2.8E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL538_14690 85148c8e4a64b6d7fc82a4a32628fc4e 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 3.6E-23 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_17895 0908091183337dcf1e53dd0efe17b0eb 288 Pfam PF05114 Protein of unknown function (DUF692) 10 268 5.4E-91 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 AL538_17895 0908091183337dcf1e53dd0efe17b0eb 288 SUPERFAMILY SSF51658 30 233 1.03E-6 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_17895 0908091183337dcf1e53dd0efe17b0eb 288 Gene3D G3DSA:3.20.20.150 6 280 3.4E-80 T 11-10-2018 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 6.4E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 6.4E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 6.4E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 23 102 8.9E-18 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 2.7E-28 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_05120 61b03588eb6a8dbe5595adf6557ec247 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.424 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_22310 0d31fb72f63f16fcdbe81a54d7920574 550 Pfam PF08019 Domain of unknown function (DUF1705) 58 211 1.0E-48 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AL538_22310 0d31fb72f63f16fcdbe81a54d7920574 550 Pfam PF00884 Sulfatase 242 532 2.0E-45 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_22310 0d31fb72f63f16fcdbe81a54d7920574 550 Gene3D G3DSA:3.40.720.10 217 550 1.4E-87 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_22310 0d31fb72f63f16fcdbe81a54d7920574 550 SUPERFAMILY SSF53649 320 537 7.69E-19 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 ProSitePatterns PS01218 TatC family signature. 155 174 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 15.927 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.5E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.5E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.5E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.5E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 9.3E-76 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_10115 b56de0d1786a46dc65602c0d0e1d81c7 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 3.8E-66 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AL538_02870 a016ef9e3121360024d845fc52382d93 153 Gene3D G3DSA:3.30.1330.40 1 151 5.8E-51 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_02870 a016ef9e3121360024d845fc52382d93 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 4 145 3.2E-29 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AL538_02870 a016ef9e3121360024d845fc52382d93 153 SUPERFAMILY SSF55298 1 151 8.17E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_20560 be26dc55ba71b7498874c41aac07c40d 401 Pfam PF07690 Major Facilitator Superfamily 15 354 1.1E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_20560 be26dc55ba71b7498874c41aac07c40d 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 384 3.2E-62 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL538_20560 be26dc55ba71b7498874c41aac07c40d 401 SUPERFAMILY SSF103473 9 389 3.01E-59 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_20560 be26dc55ba71b7498874c41aac07c40d 401 Gene3D G3DSA:1.20.1720.10 10 387 4.8E-99 T 11-10-2018 AL538_15135 cc50d0f50fe4c34aeab2fe72e69b912c 68 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.1E-12 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AL538_15135 cc50d0f50fe4c34aeab2fe72e69b912c 68 Gene3D G3DSA:1.20.5.420 1 67 1.8E-7 T 11-10-2018 AL538_15135 cc50d0f50fe4c34aeab2fe72e69b912c 68 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 63 2.0E-11 T 11-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AL538_25755 99a7491f12bc7bc44d02dc3febb4e349 251 Gene3D G3DSA:3.40.50.1580 19 251 2.6E-67 T 11-10-2018 AL538_25755 99a7491f12bc7bc44d02dc3febb4e349 251 Pfam PF01048 Phosphorylase superfamily 22 242 2.1E-48 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_25755 99a7491f12bc7bc44d02dc3febb4e349 251 SUPERFAMILY SSF53167 22 249 2.75E-63 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_25755 99a7491f12bc7bc44d02dc3febb4e349 251 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 23 251 9.1E-53 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SMART SM00304 178 233 1.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SMART SM00388 234 298 1.6E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 4.0E-29 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Gene3D G3DSA:1.10.287.130 182 299 7.9E-26 T 11-10-2018 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 8.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 8.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 8.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SMART SM00387 343 457 9.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Gene3D G3DSA:3.30.450.170 39 150 1.1E-8 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 4.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Pfam PF00672 HAMP domain 178 229 6.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SUPERFAMILY SSF47384 217 297 1.96E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 5.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_20460 56426d1d3a79fd8583f39313a0576653 457 Gene3D G3DSA:3.30.565.10 310 457 3.0E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SUPERFAMILY SSF55874 288 455 1.17E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_20460 56426d1d3a79fd8583f39313a0576653 457 SUPERFAMILY SSF158472 178 230 5.89E-6 T 11-10-2018 AL538_23400 8cc62c334b3e6f3ed31d1dd5891978fc 199 Gene3D G3DSA:2.40.160.20 39 173 5.1E-5 T 11-10-2018 AL538_23400 8cc62c334b3e6f3ed31d1dd5891978fc 199 SUPERFAMILY SSF56925 62 166 2.63E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_04970 d0fbc520647e7abc786405226265d574 247 Pfam PF01578 Cytochrome C assembly protein 29 184 2.7E-32 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL538_04970 d0fbc520647e7abc786405226265d574 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.5E-85 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04970 d0fbc520647e7abc786405226265d574 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_11710 4afbd3820ddf84db340e697d4cc26d54 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.8E-41 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_21280 9cfa80e4d2478c3123df612cc13567b5 330 Pfam PF00691 OmpA family 170 266 1.5E-10 T 11-10-2018 IPR006665 OmpA-like domain AL538_21280 9cfa80e4d2478c3123df612cc13567b5 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 62 2.7E-16 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain AL538_21280 9cfa80e4d2478c3123df612cc13567b5 330 SUPERFAMILY SSF103088 154 274 4.58E-19 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_21280 9cfa80e4d2478c3123df612cc13567b5 330 Gene3D G3DSA:3.30.1330.60 124 306 2.2E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_16240 691e8b35240772c4f97846ad7a019983 223 SMART SM00382 30 218 2.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16240 691e8b35240772c4f97846ad7a019983 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_16240 691e8b35240772c4f97846ad7a019983 223 SUPERFAMILY SSF52540 1 217 6.31E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16240 691e8b35240772c4f97846ad7a019983 223 Gene3D G3DSA:3.40.50.300 1 223 8.5E-58 T 11-10-2018 AL538_16240 691e8b35240772c4f97846ad7a019983 223 Pfam PF00005 ABC transporter 21 167 1.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_10215 b24d0dc1dd9a8db117a23d17714a577d 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 10 296 23.864 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AL538_10215 b24d0dc1dd9a8db117a23d17714a577d 314 PIRSF PIRSF035875 9 294 1.2E-53 T 11-10-2018 IPR017039 Virulence factor BrkB AL538_10215 b24d0dc1dd9a8db117a23d17714a577d 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 2.1E-83 T 11-10-2018 IPR017039 Virulence factor BrkB AL538_10215 b24d0dc1dd9a8db117a23d17714a577d 314 Pfam PF03631 Virulence factor BrkB 33 280 8.6E-59 T 11-10-2018 IPR017039 Virulence factor BrkB AL538_05700 7a7f3c1fdb088dc1a7f2d5d6fba8bb06 220 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 217 1.9E-73 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative AL538_05700 7a7f3c1fdb088dc1a7f2d5d6fba8bb06 220 Pfam PF12973 ChrR Cupin-like domain 128 194 5.0E-13 T 11-10-2018 IPR025979 ChrR-like cupin domain AL538_05700 7a7f3c1fdb088dc1a7f2d5d6fba8bb06 220 Gene3D G3DSA:1.10.10.1320 1 106 2.2E-13 T 11-10-2018 AL538_05700 7a7f3c1fdb088dc1a7f2d5d6fba8bb06 220 SUPERFAMILY SSF51182 110 204 1.05E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_05700 7a7f3c1fdb088dc1a7f2d5d6fba8bb06 220 Gene3D G3DSA:2.60.120.10 109 198 1.7E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01295 ea3ccc5946924347a804d8c7e281332d 158 Gene3D G3DSA:3.40.30.10 19 152 1.5E-16 T 11-10-2018 AL538_01295 ea3ccc5946924347a804d8c7e281332d 158 SUPERFAMILY SSF52833 34 152 3.12E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_01295 ea3ccc5946924347a804d8c7e281332d 158 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_18650 fa57c71bb90a7742a23454d9e22c41e5 81 SUPERFAMILY SSF101744 1 80 5.18E-22 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AL538_18650 fa57c71bb90a7742a23454d9e22c41e5 81 Gene3D G3DSA:2.30.30.400 2 80 3.1E-15 T 11-10-2018 IPR038626 Rof-like superfamily AL538_18650 fa57c71bb90a7742a23454d9e22c41e5 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.1E-28 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination AL538_12700 cc90f0a458a1795910ad3a51597cb6da 119 Pfam PF04355 SmpA / OmlA family 35 103 7.5E-26 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AL538_12700 cc90f0a458a1795910ad3a51597cb6da 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.26 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE AL538_12700 cc90f0a458a1795910ad3a51597cb6da 119 Gene3D G3DSA:3.30.1450.10 34 117 1.0E-25 T 11-10-2018 IPR037873 BamE-like AL538_23230 87639f981d09d261985342f0f4978868 410 SUPERFAMILY SSF103473 9 402 8.63E-57 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_23230 87639f981d09d261985342f0f4978868 410 Pfam PF07690 Major Facilitator Superfamily 15 294 2.9E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_23230 87639f981d09d261985342f0f4978868 410 Gene3D G3DSA:1.20.1250.20 3 401 5.4E-57 T 11-10-2018 AL538_25615 6d343c15d691fa851918105fffcf71bf 244 SUPERFAMILY SSF55781 87 240 7.19E-32 T 11-10-2018 AL538_25615 6d343c15d691fa851918105fffcf71bf 244 SUPERFAMILY SSF46785 11 77 1.22E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_25615 6d343c15d691fa851918105fffcf71bf 244 Gene3D G3DSA:1.10.10.10 9 79 1.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25615 6d343c15d691fa851918105fffcf71bf 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 2.8E-14 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal AL538_25615 6d343c15d691fa851918105fffcf71bf 244 Gene3D G3DSA:3.30.450.40 80 240 2.2E-59 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_25615 6d343c15d691fa851918105fffcf71bf 244 Pfam PF09339 IclR helix-turn-helix domain 13 59 3.7E-5 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.6E-130 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 SUPERFAMILY SSF118215 9 407 6.54E-121 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 7.4E-52 T 11-10-2018 AL538_18270 b454449ad8769c1bd87b470c5f55f641 434 Gene3D G3DSA:1.10.3860.10 1 423 5.2E-140 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 6.0E-36 T 11-10-2018 IPR012816 NADAR AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 156 343 1.4E-82 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 Gene3D G3DSA:3.40.50.10990 152 323 1.7E-72 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 Gene3D G3DSA:1.10.357.40 2 150 5.1E-55 T 11-10-2018 IPR037238 YbiA-like superfamily AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 2.4E-36 T 11-10-2018 IPR012816 NADAR AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 SUPERFAMILY SSF143990 4 145 4.84E-51 T 11-10-2018 IPR037238 YbiA-like superfamily AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 Pfam PF00925 GTP cyclohydrolase II 158 320 2.0E-65 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.618 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 PIRSF PIRSF001259 140 352 7.1E-95 T 11-10-2018 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 PIRSF PIRSF001259 1 150 7.9E-15 T 11-10-2018 AL538_28510 fbfb6ef413b903284b4444993d2e045e 352 SUPERFAMILY SSF142695 151 322 3.4E-65 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AL538_09915 269f651cb46ea5bda9b6771ee809c14e 318 Gene3D G3DSA:1.10.3720.10 92 312 2.1E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09915 269f651cb46ea5bda9b6771ee809c14e 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 2.9E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_09915 269f651cb46ea5bda9b6771ee809c14e 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 2.2E-8 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL538_09915 269f651cb46ea5bda9b6771ee809c14e 318 SUPERFAMILY SSF161098 99 300 1.44E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17350 2451172c0dc816b0bf66451d9b60f38d 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 7.3E-44 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 AL538_17350 2451172c0dc816b0bf66451d9b60f38d 316 PIRSF PIRSF037004 1 316 4.2E-138 T 11-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 AL538_17350 2451172c0dc816b0bf66451d9b60f38d 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 1.8E-35 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 2.3E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 PIRSF PIRSF001480 1 395 2.3E-101 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 Gene3D G3DSA:1.10.441.10 149 306 6.5E-130 T 11-10-2018 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 Gene3D G3DSA:2.60.120.10 9 281 6.5E-130 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 Pfam PF01238 Phosphomannose isomerase type I 4 361 1.4E-82 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 SUPERFAMILY SSF51182 3 380 7.13E-96 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 Gene3D G3DSA:2.60.120.10 307 388 6.5E-130 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_15045 22502c8c2aef7fc2ec3b2fafc2686d32 395 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 389 3.5E-94 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_13310 4f24a38500f6da6f38fa66e81a684fb8 193 Pfam PF01713 Smr domain 95 175 3.5E-21 T 11-10-2018 IPR002625 Smr domain AL538_13310 4f24a38500f6da6f38fa66e81a684fb8 193 Gene3D G3DSA:3.30.1370.110 48 181 2.9E-43 T 11-10-2018 AL538_13310 4f24a38500f6da6f38fa66e81a684fb8 193 SMART SM00463 92 175 5.8E-15 T 11-10-2018 IPR002625 Smr domain AL538_13310 4f24a38500f6da6f38fa66e81a684fb8 193 SUPERFAMILY SSF160443 93 175 2.88E-14 T 11-10-2018 IPR036063 Smr domain superfamily AL538_06870 818ff091032f57d03f21323c3b2c9ed8 192 Gene3D G3DSA:1.20.120.740 4 192 2.8E-48 T 11-10-2018 AL538_06870 818ff091032f57d03f21323c3b2c9ed8 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 6.4E-36 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL538_06870 818ff091032f57d03f21323c3b2c9ed8 192 SUPERFAMILY SSF101327 6 178 3.14E-46 T 11-10-2018 IPR036255 YgfB-like superfamily AL538_06870 818ff091032f57d03f21323c3b2c9ed8 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 32.706 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL538_11725 92892fa78b6e13691e17a476a24a600d 275 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 272 50.773 T 11-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 AL538_11725 92892fa78b6e13691e17a476a24a600d 275 SUPERFAMILY SSF53807 21 267 5.89E-60 T 11-10-2018 AL538_11725 92892fa78b6e13691e17a476a24a600d 275 Pfam PF01497 Periplasmic binding protein 26 247 1.1E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_11725 92892fa78b6e13691e17a476a24a600d 275 Gene3D G3DSA:3.40.50.1980 23 141 1.7E-35 T 11-10-2018 AL538_11725 92892fa78b6e13691e17a476a24a600d 275 Gene3D G3DSA:3.40.50.1980 143 271 2.3E-29 T 11-10-2018 AL538_26765 eb88396aad913fbd64681f66c101c237 135 Gene3D G3DSA:3.30.420.270 62 130 4.6E-10 T 11-10-2018 AL538_26765 eb88396aad913fbd64681f66c101c237 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 134 2.2E-30 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 4.3E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Pfam PF00072 Response regulator receiver domain 451 559 6.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.2E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SMART SM00387 316 427 1.2E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Gene3D G3DSA:3.40.50.2300 446 566 1.2E-34 T 11-10-2018 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Gene3D G3DSA:3.30.565.10 268 431 9.0E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SUPERFAMILY SSF55874 258 426 5.24E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SMART SM00388 204 269 6.4E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 Gene3D G3DSA:1.10.287.130 181 267 3.1E-22 T 11-10-2018 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SUPERFAMILY SSF52172 447 565 2.99E-33 T 11-10-2018 IPR011006 CheY-like superfamily AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SUPERFAMILY SSF47384 193 269 4.9E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 9.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 9.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 9.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 9.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_02980 0c83cb3441754fe2c4cd9a7f2b8b60a6 566 SMART SM00448 449 560 7.8E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_26175 5e4f4af12a80ab2c3ec92073f5228b21 339 Pfam PF02628 Cytochrome oxidase assembly protein 5 315 1.9E-83 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AL538_20475 cd9520e8923673b627ad75f741275def 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 305 425 4.7E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_20475 cd9520e8923673b627ad75f741275def 455 PIRSF PIRSF037714 1 450 8.7E-155 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 Gene3D G3DSA:2.40.50.100 68 196 1.0E-74 T 11-10-2018 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 3.6E-74 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 Gene3D G3DSA:2.40.420.20 280 351 1.0E-74 T 11-10-2018 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 Gene3D G3DSA:2.40.30.170 58 279 1.0E-74 T 11-10-2018 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 Gene3D G3DSA:1.10.287.470 103 162 1.0E-74 T 11-10-2018 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 SUPERFAMILY SSF111369 58 273 5.36E-42 T 11-10-2018 AL538_09845 1152fc47a3edfb241e99eacb349aa85c 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 1.8E-28 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.462 T 11-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 SUPERFAMILY SSF54826 1 100 5.74E-24 T 11-10-2018 AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 SMART SM00922 116 213 5.6E-7 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 Gene3D G3DSA:3.20.20.120 99 300 1.0E-112 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 8.2E-110 T 11-10-2018 AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 Pfam PF13378 Enolase C-terminal domain-like 125 283 1.1E-12 T 11-10-2018 IPR029065 Enolase C-terminal domain-like AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 Gene3D G3DSA:3.30.390.10 4 306 1.0E-112 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL538_14325 cecc9bd75c1780a39c8c3756bba1ded8 329 SUPERFAMILY SSF51604 108 321 8.65E-47 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 SUPERFAMILY SSF47729 1 90 3.68E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 SMART SM00411 1 90 9.8E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.9E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.9E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.9E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_14265 31ce55cfd174ded65ce9e966ad911de6 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.1E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_10750 d978b8b58433536b1dce7974f318f382 115 Gene3D G3DSA:3.30.429.10 1 115 1.1E-31 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL538_10750 d978b8b58433536b1dce7974f318f382 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 2.6E-7 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AL538_10750 d978b8b58433536b1dce7974f318f382 115 SUPERFAMILY SSF55331 2 115 7.53E-33 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL538_15825 bc86977859ab61258df1b1686f08c30e 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.5E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL538_15825 bc86977859ab61258df1b1686f08c30e 245 Pfam PF00977 Histidine biosynthesis protein 2 234 2.5E-75 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AL538_15825 bc86977859ab61258df1b1686f08c30e 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.534 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AL538_15825 bc86977859ab61258df1b1686f08c30e 245 Gene3D G3DSA:3.20.20.70 1 245 6.8E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15825 bc86977859ab61258df1b1686f08c30e 245 SUPERFAMILY SSF51366 2 242 6.12E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_22565 6fa2f0c3a0535c4632e6240cd0cd35ee 108 Gene3D G3DSA:3.40.1440.10 3 105 8.5E-30 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_22565 6fa2f0c3a0535c4632e6240cd0cd35ee 108 SMART SM00465 8 86 2.1E-5 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL538_22565 6fa2f0c3a0535c4632e6240cd0cd35ee 108 SUPERFAMILY SSF82771 9 79 7.06E-14 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_22565 6fa2f0c3a0535c4632e6240cd0cd35ee 108 Pfam PF01541 GIY-YIG catalytic domain 9 79 1.9E-17 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL538_06310 b240ae96f1e9fbd6314fc9ac5ebe0196 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.3E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_06310 b240ae96f1e9fbd6314fc9ac5ebe0196 341 Gene3D G3DSA:1.10.3720.10 94 303 4.7E-15 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06310 b240ae96f1e9fbd6314fc9ac5ebe0196 341 SUPERFAMILY SSF161098 96 288 3.27E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_10785 5431c288c87c4b35594a2d4406f9b2cc 305 Pfam PF01040 UbiA prenyltransferase family 21 274 6.5E-39 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL538_10785 5431c288c87c4b35594a2d4406f9b2cc 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.731 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AL538_10785 5431c288c87c4b35594a2d4406f9b2cc 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.1E-96 T 11-10-2018 AL538_10785 5431c288c87c4b35594a2d4406f9b2cc 305 PIRSF PIRSF005355 1 303 5.7E-83 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 AL538_20790 cbe9586dc93f5f287ab8a8b852278f3a 1373 SUPERFAMILY SSF55486 300 665 2.78E-17 T 11-10-2018 AL538_20790 cbe9586dc93f5f287ab8a8b852278f3a 1373 Gene3D G3DSA:3.40.390.10 562 662 6.3E-9 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AL538_20790 cbe9586dc93f5f287ab8a8b852278f3a 1373 Pfam PF16313 Met-zincin 591 682 3.5E-6 T 11-10-2018 IPR032534 Domain of unknown function DUF4953 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 Gene3D G3DSA:3.90.1820.20 1 443 1.9E-138 T 11-10-2018 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 SUPERFAMILY SSF56327 173 448 1.62E-73 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 1.1E-62 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 SUPERFAMILY SSF51735 3 170 7.54E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.4E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 6.1E-76 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AL538_05185 a8d066d1b49c2453100759136a1edabd 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 SMART SM00322 60 125 7.7E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 Pfam PF07650 KH domain 38 111 6.7E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 4.2E-97 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.593 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54814 2 106 1.57E-36 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10855 b0d364e468acde3e90694ae9e23c8932 232 Gene3D G3DSA:3.30.300.20 17 107 3.7E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 Pfam PF01371 Trp repressor protein 8 94 9.2E-33 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 Gene3D G3DSA:1.10.1270.10 1 98 2.3E-33 T 11-10-2018 IPR038116 TrpR-like superfamily AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.424 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 PIRSF PIRSF003196 1 100 1.2E-39 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 84 1.4E-25 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 82 6.0E-39 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 AL538_12085 43c6286dcafdf857b8ff2ead1692c6b9 100 SUPERFAMILY SSF48295 2 95 4.18E-29 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AL538_10410 db10defb879a1fb1f76b7dcf287a9ffc 135 Gene3D G3DSA:3.30.420.270 61 129 8.2E-10 T 11-10-2018 AL538_10410 db10defb879a1fb1f76b7dcf287a9ffc 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 1.4E-32 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_17845 007318d9ad5f22ca6e9c3ffde7dd76c0 179 Pfam PF03358 NADPH-dependent FMN reductase 3 126 5.7E-28 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL538_17845 007318d9ad5f22ca6e9c3ffde7dd76c0 179 Gene3D G3DSA:3.40.50.360 1 179 1.5E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_17845 007318d9ad5f22ca6e9c3ffde7dd76c0 179 SUPERFAMILY SSF52218 2 162 6.83E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 1.9E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 5.0E-115 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 SUPERFAMILY SSF47203 361 508 6.93E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Gene3D G3DSA:1.20.140.10 361 508 9.1E-100 T 11-10-2018 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Gene3D G3DSA:1.10.540.10 123 236 9.1E-100 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 3.4E-13 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 Gene3D G3DSA:2.40.110.10 237 360 9.1E-100 T 11-10-2018 AL538_05325 f7ad225d815eb33cf2b3a1ee11aeccf4 814 SUPERFAMILY SSF56645 122 356 9.56E-44 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AL538_24780 8ed74ec8d76f0213c200eeec627a3b8b 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 158 3.9E-15 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL538_24780 8ed74ec8d76f0213c200eeec627a3b8b 175 Gene3D G3DSA:3.40.50.1240 1 169 4.3E-19 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_24780 8ed74ec8d76f0213c200eeec627a3b8b 175 SUPERFAMILY SSF53254 1 160 3.0E-19 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_22870 d3b51f87376809ce653d0422de5f7449 449 Gene3D G3DSA:2.40.50.100 302 336 9.5E-13 T 11-10-2018 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 Pfam PF13437 HlyD family secretion protein 301 405 3.9E-14 T 11-10-2018 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 Gene3D G3DSA:1.10.287.470 228 301 9.5E-13 T 11-10-2018 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 88 108 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 46 69 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 4.5E-29 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 Gene3D G3DSA:2.40.30.170 339 426 9.5E-13 T 11-10-2018 AL538_22870 d3b51f87376809ce653d0422de5f7449 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 449 1.1E-87 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL538_13435 470dcce8eb593c174c3a6824ccbd61f5 131 PIRSF PIRSF002889 1 131 2.2E-31 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL538_13435 470dcce8eb593c174c3a6824ccbd61f5 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 1.5E-27 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AL538_03425 038012598ea45d2a2d0cf3c569a43c23 131 SUPERFAMILY SSF54637 8 129 1.25E-37 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_03425 038012598ea45d2a2d0cf3c569a43c23 131 Gene3D G3DSA:3.10.129.10 1 131 1.5E-38 T 11-10-2018 AL538_03425 038012598ea45d2a2d0cf3c569a43c23 131 Pfam PF03061 Thioesterase superfamily 26 98 2.0E-19 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 Gene3D G3DSA:3.40.50.1980 31 188 1.8E-53 T 11-10-2018 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 Gene3D G3DSA:3.40.50.1980 189 300 7.3E-41 T 11-10-2018 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 63 76 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 32 50 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 187 208 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 266 285 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 76 93 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00690 Adhesin family signature 240 258 1.4E-40 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 298 3.8E-73 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 SUPERFAMILY SSF53807 28 301 1.96E-88 T 11-10-2018 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 76 95 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 57 75 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 187 204 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 32 53 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 213 231 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 236 253 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_15925 3e9b3081f8641a60085db4eff1a36bbd 302 PRINTS PR00691 Adhesin B signature 258 276 5.2E-35 T 11-10-2018 IPR006129 Adhesin B GO:0007155 AL538_05255 cb82b92c22792cd6ad7be3ef50216781 156 Pfam PF00578 AhpC/TSA family 7 134 3.7E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_05255 cb82b92c22792cd6ad7be3ef50216781 156 SUPERFAMILY SSF52833 4 154 4.23E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_05255 cb82b92c22792cd6ad7be3ef50216781 156 PIRSF PIRSF000239 1 145 9.0E-17 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_05255 cb82b92c22792cd6ad7be3ef50216781 156 Gene3D G3DSA:3.40.30.10 3 155 2.8E-45 T 11-10-2018 AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 Pfam PF00227 Proteasome subunit 2 169 1.5E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 SUPERFAMILY SSF56235 2 172 1.1E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 4.1E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.105 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 PIRSF PIRSF039093 1 175 1.7E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AL538_10795 1fa19bbfe88c9996d2d7df1a7f3e444b 183 Gene3D G3DSA:3.60.20.10 1 173 2.2E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_23000 9a450acc68b828811f8f5524a973835b 82 Pfam PF10688 Bacterial inner membrane protein 4 73 2.7E-9 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL538_23000 9a450acc68b828811f8f5524a973835b 82 Gene3D G3DSA:1.20.1280.290 27 76 1.4E-6 T 11-10-2018 AL538_23000 9a450acc68b828811f8f5524a973835b 82 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 5.0E-33 T 11-10-2018 IPR020137 Uncharacterised protein family HI1736 AL538_01065 b96b75758feb872bb0e034e9bca5b55c 427 SUPERFAMILY SSF50182 192 259 9.15E-12 T 11-10-2018 IPR010920 LSM domain superfamily AL538_01065 b96b75758feb872bb0e034e9bca5b55c 427 Pfam PF00924 Mechanosensitive ion channel 150 397 4.2E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_01065 b96b75758feb872bb0e034e9bca5b55c 427 Gene3D G3DSA:2.30.30.60 209 255 1.2E-6 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_22645 a39fe4b29b8b4f47a6d49755d6baeed6 115 Pfam PF09361 Phasin protein 8 108 1.8E-20 T 11-10-2018 IPR018968 Phasin AL538_22645 a39fe4b29b8b4f47a6d49755d6baeed6 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 8.2E-56 T 11-10-2018 IPR014176 Phasin, subfamily 3 AL538_22645 a39fe4b29b8b4f47a6d49755d6baeed6 115 PIRSF PIRSF028226 1 115 1.5E-56 T 11-10-2018 IPR014176 Phasin, subfamily 3 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 TIGRFAM TIGR01586 yopT_cys_prot: cysteine protease domain, YopT-type 134 321 2.3E-30 T 11-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 Gene3D G3DSA:3.90.70.20 127 297 8.0E-12 T 11-10-2018 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 108 324 3.1E-40 T 11-10-2018 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 SUPERFAMILY SSF54001 137 308 8.73E-24 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 68 87 5.5E-13 T 11-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 165 191 5.5E-13 T 11-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 AL538_26705 00f783a0ac7946dc3cfa5b43fd811386 327 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 273 293 5.5E-13 T 11-10-2018 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 AL538_04795 4cb52cd1dec2dec17ad8c91d1c40d247 368 Pfam PF00072 Response regulator receiver domain 22 131 3.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_04795 4cb52cd1dec2dec17ad8c91d1c40d247 368 SMART SM00448 20 132 2.5E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_04795 4cb52cd1dec2dec17ad8c91d1c40d247 368 Gene3D G3DSA:3.60.40.10 164 351 3.2E-6 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AL538_04795 4cb52cd1dec2dec17ad8c91d1c40d247 368 Gene3D G3DSA:3.40.50.2300 9 148 2.3E-35 T 11-10-2018 AL538_04795 4cb52cd1dec2dec17ad8c91d1c40d247 368 SUPERFAMILY SSF52172 21 137 6.69E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 162 3.2E-25 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Gene3D G3DSA:1.20.5.70 340 373 2.2E-19 T 11-10-2018 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Gene3D G3DSA:3.30.1950.10 85 166 1.5E-119 T 11-10-2018 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Gene3D G3DSA:3.10.560.10 51 337 1.5E-119 T 11-10-2018 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Pfam PF10531 SLBB domain 253 302 1.2E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Pfam PF10531 SLBB domain 171 217 2.3E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_18215 6caa9c9d0aea5adb12ef6d44a7e7f9ee 373 Gene3D G3DSA:3.10.560.10 63 251 1.5E-119 T 11-10-2018 AL538_17530 7c53f66acd8d189e7eaac437370eb2a3 165 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 97 1.6E-14 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL538_17530 7c53f66acd8d189e7eaac437370eb2a3 165 SUPERFAMILY SSF53146 1 116 1.31E-19 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AL538_17530 7c53f66acd8d189e7eaac437370eb2a3 165 Gene3D G3DSA:3.30.420.130 3 99 7.4E-14 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily AL538_21580 a0941555f06c76b69dde56539fb206a6 149 Gene3D G3DSA:3.90.79.10 1 149 4.8E-34 T 11-10-2018 AL538_21580 a0941555f06c76b69dde56539fb206a6 149 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_21580 a0941555f06c76b69dde56539fb206a6 149 SUPERFAMILY SSF55811 14 140 1.35E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_21580 a0941555f06c76b69dde56539fb206a6 149 Pfam PF00293 NUDIX domain 14 130 1.1E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_21580 a0941555f06c76b69dde56539fb206a6 149 PRINTS PR00502 NUDIX hydrolase family signature 55 70 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_21580 a0941555f06c76b69dde56539fb206a6 149 PRINTS PR00502 NUDIX hydrolase family signature 41 55 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_27670 2938734a7e661d07be28099e51a0cad5 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 9.8E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.9E-100 T 11-10-2018 AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.1E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 3.7E-87 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 SUPERFAMILY SSF56219 1 268 1.05E-85 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AL538_14695 004dd45698c7ce6f260eacf767e2a473 268 Gene3D G3DSA:3.60.10.10 1 268 1.4E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_25430 f91c67f7294e253d13006cdf42e30251 630 Gene3D G3DSA:3.30.450.20 51 259 2.8E-17 T 11-10-2018 AL538_25430 f91c67f7294e253d13006cdf42e30251 630 Gene3D G3DSA:3.30.450.20 62 175 2.8E-17 T 11-10-2018 AL538_25430 f91c67f7294e253d13006cdf42e30251 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 595 6.6E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_25430 f91c67f7294e253d13006cdf42e30251 630 SMART SM00283 367 628 4.3E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_25430 f91c67f7294e253d13006cdf42e30251 630 SUPERFAMILY SSF58104 342 629 1.2E-70 T 11-10-2018 AL538_25430 f91c67f7294e253d13006cdf42e30251 630 Gene3D G3DSA:1.10.287.950 304 630 9.3E-70 T 11-10-2018 AL538_08390 72d764b4f14c20d60b91a5fa1b1bdeaf 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.4E-34 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AL538_03655 66356c4bcc058e77cba3d3efa404064b 170 Pfam PF00085 Thioredoxin 51 159 2.2E-11 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL538_03655 66356c4bcc058e77cba3d3efa404064b 170 SUPERFAMILY SSF52833 41 165 1.85E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_03655 66356c4bcc058e77cba3d3efa404064b 170 Gene3D G3DSA:3.40.30.10 26 167 2.2E-20 T 11-10-2018 AL538_03655 66356c4bcc058e77cba3d3efa404064b 170 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 SUPERFAMILY SSF46785 10 98 2.49E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 Gene3D G3DSA:3.90.1150.10 110 445 8.8E-57 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 SMART SM00345 17 76 1.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 SUPERFAMILY SSF53383 70 449 1.6E-66 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 Gene3D G3DSA:1.10.10.10 10 79 9.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 76 3.0E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 Gene3D G3DSA:3.40.640.10 131 348 8.8E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_01345 e43b4cd81be23c3076c0ddbdc735e831 452 Pfam PF00155 Aminotransferase class I and II 112 442 2.2E-20 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 SUPERFAMILY SSF56801 8 644 7.33E-181 T 11-10-2018 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.0E-20 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.531 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Gene3D G3DSA:3.30.300.30 519 650 2.4E-31 T 11-10-2018 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 4.9E-26 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Pfam PF00501 AMP-binding enzyme 84 523 6.0E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 Gene3D G3DSA:3.40.50.12780 50 516 1.6E-102 T 11-10-2018 AL538_08465 5bad7f734a815099e38457322eaa5b77 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_22130 83990880f7b5489cf9bc28841871eeef 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 2.5E-45 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_22130 83990880f7b5489cf9bc28841871eeef 392 SUPERFAMILY SSF53850 24 391 1.81E-90 T 11-10-2018 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 167 186 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 32 50 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 66 84 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 126 145 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 295 316 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 353 372 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 229 248 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 PRINTS PR00181 Maltose binding protein signature 147 166 7.5E-80 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 Gene3D G3DSA:3.40.190.10 134 384 1.6E-135 T 11-10-2018 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 AL538_22130 83990880f7b5489cf9bc28841871eeef 392 Gene3D G3DSA:3.40.190.10 44 353 1.6E-135 T 11-10-2018 AL538_21895 bd62a778d02a92f63db40018ac8e575f 451 Gene3D G3DSA:3.30.70.270 311 441 3.0E-5 T 11-10-2018 AL538_21895 bd62a778d02a92f63db40018ac8e575f 451 SUPERFAMILY SSF55073 315 408 1.65E-5 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_21895 bd62a778d02a92f63db40018ac8e575f 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 317 405 5.1E-6 T 11-10-2018 IPR000160 GGDEF domain AL538_16350 c2916bccd46db924406287fe6d7343a2 644 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 483 640 1.3E-27 T 11-10-2018 IPR000160 GGDEF domain AL538_16350 c2916bccd46db924406287fe6d7343a2 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 488 640 1.0E-28 T 11-10-2018 IPR000160 GGDEF domain AL538_16350 c2916bccd46db924406287fe6d7343a2 644 Gene3D G3DSA:3.30.70.270 482 643 1.1E-31 T 11-10-2018 AL538_16350 c2916bccd46db924406287fe6d7343a2 644 SUPERFAMILY SSF55073 492 640 9.42E-27 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_16350 c2916bccd46db924406287fe6d7343a2 644 SMART SM00267 476 642 4.7E-23 T 11-10-2018 IPR000160 GGDEF domain AL538_00225 5105557504f8ed5509c38479c70dd61f 582 SUPERFAMILY SSF53300 103 276 1.5E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_00225 5105557504f8ed5509c38479c70dd61f 582 Pfam PF13519 von Willebrand factor type A domain 106 211 3.2E-10 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_00225 5105557504f8ed5509c38479c70dd61f 582 Gene3D G3DSA:3.40.50.410 101 284 5.7E-22 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_00225 5105557504f8ed5509c38479c70dd61f 582 SUPERFAMILY SSF48452 357 457 1.61E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17490 62621e2e0ff031de0bff84788f9e9af0 115 Gene3D G3DSA:1.10.260.40 3 84 1.5E-9 T 11-10-2018 AL538_17490 62621e2e0ff031de0bff84788f9e9af0 115 SUPERFAMILY SSF47413 8 87 3.94E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 SUPERFAMILY SSF57783 17 64 2.72E-13 T 11-10-2018 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.6E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 4.6E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 116 152 6.9E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 176 2.7 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Gene3D G3DSA:3.30.65.10 11 61 4.3E-8 T 11-10-2018 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 Gene3D G3DSA:3.30.65.10 62 111 3.3E-8 T 11-10-2018 AL538_09435 5ea337d67dd025478933d9d17a27f0ab 189 SUPERFAMILY SSF57783 66 109 1.91E-14 T 11-10-2018 AL538_16705 5c44c28ec8327f038443d1d3d678d83c 203 PIRSF PIRSF004690 3 198 3.7E-36 T 11-10-2018 IPR026269 Tat proofreading chaperone DmsD-type AL538_16705 5c44c28ec8327f038443d1d3d678d83c 203 Gene3D G3DSA:1.10.3480.10 2 199 2.8E-45 T 11-10-2018 AL538_16705 5c44c28ec8327f038443d1d3d678d83c 203 SUPERFAMILY SSF89155 5 198 1.31E-49 T 11-10-2018 IPR036411 TorD-like superfamily AL538_16705 5c44c28ec8327f038443d1d3d678d83c 203 Pfam PF02613 Nitrate reductase delta subunit 40 157 2.5E-26 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AL538_12650 68fc0d9218c3c12e83121f341bdf2028 1159 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 480 492 3.6E-7 T 11-10-2018 AL538_12650 68fc0d9218c3c12e83121f341bdf2028 1159 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 312 3.6E-7 T 11-10-2018 AL538_12650 68fc0d9218c3c12e83121f341bdf2028 1159 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 513 537 3.6E-7 T 11-10-2018 AL538_12650 68fc0d9218c3c12e83121f341bdf2028 1159 SUPERFAMILY SSF53335 79 590 5.43E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_04250 6b2702633693f811804fd853ff214e2a 315 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 36 252 2.6E-38 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 11-10-2018 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 Gene3D G3DSA:1.10.10.10 1 65 5.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 Gene3D G3DSA:3.30.70.920 66 149 4.3E-24 T 11-10-2018 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 SMART SM00344 12 121 1.8E-55 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15650 fbf92f38ba3931dd8c1b6f438f2d0b9e 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_00115 a666a7225e0e1a86155c1b46696e1156 220 Pfam PF00563 EAL domain 8 150 2.9E-6 T 11-10-2018 IPR001633 EAL domain AL538_00115 a666a7225e0e1a86155c1b46696e1156 220 SUPERFAMILY SSF141868 9 218 1.57E-11 T 11-10-2018 IPR035919 EAL domain superfamily AL538_00115 a666a7225e0e1a86155c1b46696e1156 220 Gene3D G3DSA:3.20.20.450 4 220 5.2E-10 T 11-10-2018 IPR035919 EAL domain superfamily AL538_01320 14d5abb4995df9481fd824d46bfcbf4a 456 PIRSF PIRSF006603 3 448 4.3E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_01320 14d5abb4995df9481fd824d46bfcbf4a 456 Pfam PF01554 MatE 17 184 2.6E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_01320 14d5abb4995df9481fd824d46bfcbf4a 456 Pfam PF01554 MatE 243 400 3.4E-19 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_16470 3a96630fe04fede40d45d23e37226362 159 Gene3D G3DSA:3.40.630.30 1 157 6.4E-41 T 11-10-2018 AL538_16470 3a96630fe04fede40d45d23e37226362 159 SUPERFAMILY SSF55729 1 152 1.69E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_16470 3a96630fe04fede40d45d23e37226362 159 Pfam PF13673 Acetyltransferase (GNAT) domain 29 150 7.8E-19 T 11-10-2018 IPR000182 GNAT domain AL538_11525 e1df974529adb39199701a4765937165 147 PIRSF PIRSF006318 1 136 3.4E-57 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AL538_11525 e1df974529adb39199701a4765937165 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 1.0E-47 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 Gene3D G3DSA:3.40.50.12740 5 211 6.9E-65 T 11-10-2018 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 SMART SM00448 5 118 3.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 Pfam PF00072 Response regulator receiver domain 7 119 1.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 SUPERFAMILY SSF46894 140 211 4.08E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 SUPERFAMILY SSF52172 4 135 7.83E-34 T 11-10-2018 IPR011006 CheY-like superfamily AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 SMART SM00421 148 205 1.3E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03100 9f7b6d6dc25b7c2bfd3bb0da0098d798 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 7.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_00585 6804e0b390ed79c37d1457496c6b9a36 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 17 202 30.082 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL538_00585 6804e0b390ed79c37d1457496c6b9a36 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 20 200 2.0E-73 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AL538_00585 6804e0b390ed79c37d1457496c6b9a36 207 SUPERFAMILY SSF53448 19 201 2.33E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_00585 6804e0b390ed79c37d1457496c6b9a36 207 Gene3D G3DSA:3.90.550.10 15 205 3.4E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_00585 6804e0b390ed79c37d1457496c6b9a36 207 Pfam PF12804 MobA-like NTP transferase domain 22 170 6.6E-34 T 11-10-2018 IPR025877 MobA-like NTP transferase AL538_27665 6880ddf9312102646a4538e452ba37db 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.9E-10 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_13820 3fd71475e1fff19ef8fb168e8fb5a603 142 Pfam PF01230 HIT domain 11 99 3.1E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL538_13820 3fd71475e1fff19ef8fb168e8fb5a603 142 PIRSF PIRSF000714 2 141 6.8E-54 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type AL538_13820 3fd71475e1fff19ef8fb168e8fb5a603 142 SUPERFAMILY SSF54197 3 133 6.17E-35 T 11-10-2018 IPR036265 HIT-like superfamily AL538_13820 3fd71475e1fff19ef8fb168e8fb5a603 142 Gene3D G3DSA:3.30.428.10 1 142 5.2E-44 T 11-10-2018 IPR036265 HIT-like superfamily AL538_19475 a9961e1b265aea0549d81078214966c8 312 PIRSF PIRSF018266 2 311 1.0E-72 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AL538_19475 a9961e1b265aea0549d81078214966c8 312 Pfam PF16220 Domain of unknown function (DUF4880) 10 52 1.7E-11 T 11-10-2018 IPR032623 FecR, N-terminal AL538_19475 a9961e1b265aea0549d81078214966c8 312 Pfam PF04773 FecR protein 107 197 5.9E-20 T 11-10-2018 IPR006860 FecR protein AL538_19475 a9961e1b265aea0549d81078214966c8 312 Gene3D G3DSA:2.60.120.1440 93 235 2.6E-17 T 11-10-2018 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 Gene3D G3DSA:3.40.190.10 88 291 8.8E-47 T 11-10-2018 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 Pfam PF03466 LysR substrate binding domain 97 295 2.9E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 Gene3D G3DSA:1.10.10.10 1 86 1.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 SUPERFAMILY SSF46785 3 82 9.53E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 Gene3D G3DSA:3.40.190.10 169 267 8.8E-47 T 11-10-2018 AL538_23185 41545f0c3af4e83017fe560d6db0ccb3 301 SUPERFAMILY SSF53850 88 294 2.71E-38 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 656 6.1E-26 T 11-10-2018 IPR000160 GGDEF domain AL538_14465 4316955aaa065c29de7702401f49af93 665 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 658 1.7E-28 T 11-10-2018 IPR000160 GGDEF domain AL538_14465 4316955aaa065c29de7702401f49af93 665 Gene3D G3DSA:3.30.70.270 504 660 6.0E-32 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 Gene3D G3DSA:3.40.190.10 258 460 9.7E-21 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 SMART SM00062 29 222 5.2E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_14465 4316955aaa065c29de7702401f49af93 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 258 430 2.6E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_14465 4316955aaa065c29de7702401f49af93 665 SUPERFAMILY SSF55073 516 657 1.33E-26 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_14465 4316955aaa065c29de7702401f49af93 665 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 181 6.1E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_14465 4316955aaa065c29de7702401f49af93 665 Gene3D G3DSA:3.40.190.10 102 180 3.9E-19 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 Gene3D G3DSA:3.40.190.10 336 433 9.7E-21 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 SMART SM00267 500 661 9.4E-23 T 11-10-2018 IPR000160 GGDEF domain AL538_14465 4316955aaa065c29de7702401f49af93 665 SUPERFAMILY SSF53850 44 201 7.12E-23 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 Gene3D G3DSA:3.40.190.10 44 101 3.9E-19 T 11-10-2018 AL538_14465 4316955aaa065c29de7702401f49af93 665 SUPERFAMILY SSF53850 251 469 4.45E-24 T 11-10-2018 AL538_20960 a3c1b991d16cf4150726ed6e8c2ee927 261 Pfam PF01636 Phosphotransferase enzyme family 21 164 8.3E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL538_20960 a3c1b991d16cf4150726ed6e8c2ee927 261 Gene3D G3DSA:3.90.1200.10 73 251 1.9E-13 T 11-10-2018 AL538_20960 a3c1b991d16cf4150726ed6e8c2ee927 261 SUPERFAMILY SSF56112 2 231 1.6E-29 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_04925 1af5ee9182dff1a9c0590c46e5ebf08e 422 Gene3D G3DSA:2.40.160.60 27 422 7.1E-113 T 11-10-2018 AL538_04925 1af5ee9182dff1a9c0590c46e5ebf08e 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 422 1.8E-122 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_04925 1af5ee9182dff1a9c0590c46e5ebf08e 422 SUPERFAMILY SSF56935 27 422 8.7E-88 T 11-10-2018 AL538_23505 a8f549c21a5ac761385b8bd99b2cc4ab 344 SUPERFAMILY SSF81345 21 342 1.18E-72 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_23505 a8f549c21a5ac761385b8bd99b2cc4ab 344 Gene3D G3DSA:1.10.3470.10 18 344 2.5E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_23505 a8f549c21a5ac761385b8bd99b2cc4ab 344 Pfam PF01032 FecCD transport family 40 342 2.7E-79 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 4.2E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 7.3E-89 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 SUPERFAMILY SSF51735 123 280 1.32E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.808 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 Gene3D G3DSA:3.40.50.720 6 259 8.0E-107 T 11-10-2018 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 SUPERFAMILY SSF53223 1 122 2.11E-39 T 11-10-2018 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 Gene3D G3DSA:3.40.50.10860 8 276 8.0E-107 T 11-10-2018 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_13920 58b88cb5782e4c1481381f97b2a01647 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 8.4E-69 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 6.1E-14 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 SMART SM00283 34 282 3.6E-16 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 216 245 4.1E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 4.1E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 69 98 4.1E-9 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 SUPERFAMILY SSF58104 29 243 4.84E-42 T 11-10-2018 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 108 242 1.5E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_19900 33aed9fdc36243ea64759fa1e36fd4ba 361 Gene3D G3DSA:1.10.287.950 4 255 1.3E-43 T 11-10-2018 AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 Pfam PF00106 short chain dehydrogenase 3 197 1.5E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 Gene3D G3DSA:3.40.50.720 1 265 3.5E-52 T 11-10-2018 AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 SUPERFAMILY SSF51735 2 240 6.61E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 3.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27335 3ee5df6c61061e53e61f40a7bbcefdb1 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.5E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_27370 265d2285c0da0c7fe775a8754ace9574 696 Gene3D G3DSA:3.20.20.450 432 677 7.5E-63 T 11-10-2018 IPR035919 EAL domain superfamily AL538_27370 265d2285c0da0c7fe775a8754ace9574 696 SUPERFAMILY SSF141868 439 677 3.53E-62 T 11-10-2018 IPR035919 EAL domain superfamily AL538_27370 265d2285c0da0c7fe775a8754ace9574 696 Pfam PF02378 Phosphotransferase system, EIIC 38 330 3.2E-14 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_27370 265d2285c0da0c7fe775a8754ace9574 696 Pfam PF00563 EAL domain 440 670 1.7E-56 T 11-10-2018 IPR001633 EAL domain AL538_27370 265d2285c0da0c7fe775a8754ace9574 696 SMART SM00052 433 675 5.5E-51 T 11-10-2018 IPR001633 EAL domain AL538_10655 6b560caf3644c94f58f9eb8b3d032e91 225 Gene3D G3DSA:2.40.360.10 26 224 2.0E-59 T 11-10-2018 IPR023373 YmcC-like superfamily AL538_10655 6b560caf3644c94f58f9eb8b3d032e91 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 25 219 2.3E-57 T 11-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AL538_10655 6b560caf3644c94f58f9eb8b3d032e91 225 SUPERFAMILY SSF159270 28 223 5.49E-58 T 11-10-2018 IPR023373 YmcC-like superfamily AL538_22545 cd4c8195fb66017aff721b8346095b71 445 Pfam PF01554 MatE 241 398 1.9E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_22545 cd4c8195fb66017aff721b8346095b71 445 Pfam PF01554 MatE 22 182 2.6E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_22545 cd4c8195fb66017aff721b8346095b71 445 PIRSF PIRSF006603 1 444 7.1E-85 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_22545 cd4c8195fb66017aff721b8346095b71 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 404 3.2E-47 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 194 2.4E-16 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 SUPERFAMILY SSF46689 289 330 1.52E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 SMART SM00342 247 328 8.4E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 Gene3D G3DSA:1.10.10.60 233 333 6.1E-17 T 11-10-2018 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 Pfam PF12833 Helix-turn-helix domain 255 330 8.4E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 4.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_22465 71ca7de7aa6424a9db89e02befdd98f1 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 4.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 615 7.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 7.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 7.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 629 7.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 SMART SM00388 449 516 3.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 SUPERFAMILY SSF47384 444 513 1.61E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 Gene3D G3DSA:3.30.565.10 521 673 8.0E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_00610 45c2d1a6eade43615673f040af106f6c 680 SMART SM00387 559 670 2.7E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_00610 45c2d1a6eade43615673f040af106f6c 680 Pfam PF17202 Single cache domain 3 205 319 3.0E-28 T 11-10-2018 IPR033463 Single cache domain 3 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 SUPERFAMILY SSF55874 506 668 1.44E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_00610 45c2d1a6eade43615673f040af106f6c 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 668 2.5E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_00610 45c2d1a6eade43615673f040af106f6c 680 Pfam PF00512 His Kinase A (phospho-acceptor) domain 449 514 1.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_00610 45c2d1a6eade43615673f040af106f6c 680 SUPERFAMILY SSF103190 155 311 3.66E-13 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_00610 45c2d1a6eade43615673f040af106f6c 680 Gene3D G3DSA:1.10.287.130 441 514 5.6E-22 T 11-10-2018 AL538_08450 09b54044e98e1e5b8bf49ea891c4b67d 396 Gene3D G3DSA:1.20.1250.20 195 382 9.7E-35 T 11-10-2018 AL538_08450 09b54044e98e1e5b8bf49ea891c4b67d 396 PIRSF PIRSF004925 1 385 7.5E-106 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter AL538_08450 09b54044e98e1e5b8bf49ea891c4b67d 396 Gene3D G3DSA:1.20.1250.20 2 185 1.3E-17 T 11-10-2018 AL538_08450 09b54044e98e1e5b8bf49ea891c4b67d 396 Pfam PF12832 MFS_1 like family 13 362 4.6E-40 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain AL538_08450 09b54044e98e1e5b8bf49ea891c4b67d 396 SUPERFAMILY SSF103473 8 373 1.96E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_22660 9c454ace8162d0304dab12923ed22ced 192 Gene3D G3DSA:1.10.3820.10 11 188 5.9E-33 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL538_22660 9c454ace8162d0304dab12923ed22ced 192 SUPERFAMILY SSF48695 16 191 1.54E-54 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_22660 9c454ace8162d0304dab12923ed22ced 192 PIRSF PIRSF000013 1 192 1.4E-90 T 11-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AL538_22660 9c454ace8162d0304dab12923ed22ced 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.0E-70 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 1.7E-91 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 SUPERFAMILY SSF118215 30 444 2.48E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 Gene3D G3DSA:1.10.3860.10 21 462 6.6E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.4E-15 T 11-10-2018 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 1.4E-15 T 11-10-2018 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.4E-15 T 11-10-2018 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 1.4E-15 T 11-10-2018 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 1.4E-15 T 11-10-2018 AL538_03475 19ea6ffebe63d19f25baaf054a0dc1f5 468 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.4E-15 T 11-10-2018 AL538_13620 421f0d564f3e9f34ff0b58f1e22b0a11 291 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.0E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_13620 421f0d564f3e9f34ff0b58f1e22b0a11 291 SMART SM00862 30 107 2.9E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_13620 421f0d564f3e9f34ff0b58f1e22b0a11 291 SUPERFAMILY SSF46894 11 107 2.15E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_13620 421f0d564f3e9f34ff0b58f1e22b0a11 291 Gene3D G3DSA:1.10.10.10 6 110 4.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 5.1E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 Pfam PF00230 Major intrinsic protein 6 252 6.6E-64 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 SUPERFAMILY SSF81338 9 254 5.36E-75 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 2.7E-69 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 AL538_05830 2c5eb9a986f3f964e1e02f7d6d3aa32b 284 Gene3D G3DSA:1.20.1080.10 4 260 8.1E-98 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 SMART SM00388 257 320 1.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 Gene3D G3DSA:3.30.565.10 323 456 5.4E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 1.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 SUPERFAMILY SSF47384 240 319 1.47E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 SUPERFAMILY SSF55874 310 447 1.03E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_21480 9f11b693f1518149fb44dc2a240bfc72 457 Gene3D G3DSA:1.10.287.130 194 316 2.2E-12 T 11-10-2018 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 SUPERFAMILY SSF74650 376 879 3.45E-71 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Pfam PF09261 Alpha mannosidase middle domain 279 356 1.6E-6 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 SUPERFAMILY SSF88688 284 374 7.19E-6 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 SMART SM00872 278 356 5.0E-13 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Gene3D G3DSA:2.70.98.30 480 768 2.0E-75 T 11-10-2018 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 SUPERFAMILY SSF88713 5 271 2.3E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 386 875 3.4E-35 T 11-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 265 1.2E-36 T 11-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Gene3D G3DSA:1.20.1270.50 282 381 2.9E-26 T 11-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 AL538_26380 bd3b23f2358a8099641b26f3ad0c6207 879 Gene3D G3DSA:3.20.110.10 1 275 3.6E-99 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily AL538_02010 2c047fb28c10991f3f5b8310b1e7e92d 257 SUPERFAMILY SSF81301 63 217 1.96E-16 T 11-10-2018 AL538_02010 2c047fb28c10991f3f5b8310b1e7e92d 257 Gene3D G3DSA:3.30.460.10 61 192 1.7E-6 T 11-10-2018 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 SMART SM00900 398 472 9.2E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Gene3D G3DSA:3.90.700.10 793 942 1.3E-110 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Pfam PF04205 FMN-binding domain 398 469 4.1E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 SUPERFAMILY SSF51395 4 336 3.21E-94 T 11-10-2018 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 SUPERFAMILY SSF51905 484 1002 5.53E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25370 7af265bfdbbe1951224616162839ad90 1004 SUPERFAMILY SSF56425 792 942 1.72E-35 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 624 998 3.0E-95 T 11-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Gene3D G3DSA:3.50.50.60 482 588 1.1E-17 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Gene3D G3DSA:3.20.20.70 1 371 5.2E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Pfam PF00890 FAD binding domain 606 986 2.2E-53 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Pfam PF00890 FAD binding domain 499 547 1.6E-11 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 14 333 2.2E-72 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 499 521 3.8E-5 T 11-10-2018 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 889 909 3.8E-5 T 11-10-2018 AL538_25370 7af265bfdbbe1951224616162839ad90 1004 Gene3D G3DSA:3.50.50.60 630 1000 1.3E-110 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_21015 f1ef527a63f2f6fe2826e3de716ae406 145 SUPERFAMILY SSF140566 7 136 8.63E-28 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 AL538_21015 f1ef527a63f2f6fe2826e3de716ae406 145 Pfam PF05130 FlgN protein 7 134 1.4E-15 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AL538_21015 f1ef527a63f2f6fe2826e3de716ae406 145 Gene3D G3DSA:1.20.58.300 6 135 2.0E-21 T 11-10-2018 AL538_20940 65c8282aafcf595208a60fe3f3f05240 466 Gene3D G3DSA:3.30.9.10 124 354 8.9E-62 T 11-10-2018 AL538_20940 65c8282aafcf595208a60fe3f3f05240 466 Gene3D G3DSA:3.50.50.60 30 394 8.9E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_20940 65c8282aafcf595208a60fe3f3f05240 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 1.3E-248 T 11-10-2018 IPR017715 Putative aminophosphonate oxidoreductase AL538_20940 65c8282aafcf595208a60fe3f3f05240 466 SUPERFAMILY SSF51905 21 306 5.55E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_20940 65c8282aafcf595208a60fe3f3f05240 466 Pfam PF01266 FAD dependent oxidoreductase 30 392 2.6E-49 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_05590 7139d759d2fc325248f3a5563b15c061 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-25 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL538_05590 7139d759d2fc325248f3a5563b15c061 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.3E-35 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL538_05590 7139d759d2fc325248f3a5563b15c061 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.288 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 SUPERFAMILY SSF52540 1 251 4.26E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 SMART SM00382 29 238 3.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 Pfam PF00005 ABC transporter 20 180 1.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 269 3.7E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_10450 158706e9f1492fb5f1e5161cbb2e1500 279 Gene3D G3DSA:3.40.50.300 1 276 2.0E-88 T 11-10-2018 AL538_25730 b245cf8638a94779414f1a70ca4ad7ff 292 Gene3D G3DSA:3.40.50.2300 125 259 2.3E-98 T 11-10-2018 AL538_25730 b245cf8638a94779414f1a70ca4ad7ff 292 Gene3D G3DSA:3.40.50.2300 29 278 2.3E-98 T 11-10-2018 AL538_25730 b245cf8638a94779414f1a70ca4ad7ff 292 SUPERFAMILY SSF53822 4 292 8.32E-89 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_25730 b245cf8638a94779414f1a70ca4ad7ff 292 Pfam PF13407 Periplasmic binding protein domain 28 278 3.1E-61 T 11-10-2018 IPR025997 Periplasmic binding protein AL538_03775 ca6455974336e69a24958a8d93a56bbe 353 Gene3D G3DSA:3.90.226.10 109 306 4.1E-45 T 11-10-2018 AL538_03775 ca6455974336e69a24958a8d93a56bbe 353 SUPERFAMILY SSF52096 103 303 1.3E-29 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_03775 ca6455974336e69a24958a8d93a56bbe 353 Gene3D G3DSA:3.40.1750.20 206 270 4.1E-45 T 11-10-2018 AL538_03775 ca6455974336e69a24958a8d93a56bbe 353 Pfam PF01343 Peptidase family S49 166 314 6.7E-47 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AL538_03775 ca6455974336e69a24958a8d93a56bbe 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 8.5E-56 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 312 331 1.7E-31 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 163 184 1.7E-31 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 110 136 1.7E-31 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 213 236 1.7E-31 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 PRINTS PR00447 Natural resistance-associated macrophage protein signature 138 157 1.7E-31 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 33 390 3.4E-96 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 Pfam PF01566 Natural resistance-associated macrophage protein 50 397 4.8E-122 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_20975 4828e2a3b88bfeb0febfd35ef04d064c 423 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 15 422 35.268 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 Pfam PF12833 Helix-turn-helix domain 180 255 4.5E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 SMART SM00342 174 256 1.7E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 SUPERFAMILY SSF51182 26 190 9.34E-16 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_01450 c74b1586107565e54157f5c36aa876cd 258 Gene3D G3DSA:1.10.10.60 155 258 1.8E-24 T 11-10-2018 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 SUPERFAMILY SSF46689 211 255 2.19E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 Gene3D G3DSA:2.60.120.10 5 98 1.3E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01450 c74b1586107565e54157f5c36aa876cd 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_01450 c74b1586107565e54157f5c36aa876cd 258 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_12415 59f92a2bbe22143f3d1feb906fa557c6 204 Gene3D G3DSA:1.25.40.10 27 203 3.1E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12415 59f92a2bbe22143f3d1feb906fa557c6 204 SUPERFAMILY SSF48452 89 193 1.33E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12415 59f92a2bbe22143f3d1feb906fa557c6 204 PIRSF PIRSF006170 1 204 2.2E-53 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 AL538_12415 59f92a2bbe22143f3d1feb906fa557c6 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 4.0E-56 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 4.9E-39 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 1.3E-72 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 6.2E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 6.2E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 6.2E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 6.2E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 6.2E-22 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 PIRSF PIRSF004862 27 580 7.6E-163 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 1.5E-54 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AL538_05115 14d5ff785724956a9b6599415e4dcbb8 580 Gene3D G3DSA:3.30.300.30 151 246 1.3E-10 T 11-10-2018 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 Gene3D G3DSA:3.40.190.10 159 249 1.5E-40 T 11-10-2018 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 Pfam PF03466 LysR substrate binding domain 88 238 9.8E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 Gene3D G3DSA:3.40.190.10 93 254 1.5E-40 T 11-10-2018 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 Gene3D G3DSA:1.10.10.10 1 91 2.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 SUPERFAMILY SSF46785 1 87 5.9E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 SUPERFAMILY SSF53850 88 254 2.35E-20 T 11-10-2018 AL538_25400 4c5258bc55bc1214801f76d9cec8c86b 276 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 SUPERFAMILY SSF54211 5 134 5.69E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 SUPERFAMILY SSF54980 139 204 6.62E-10 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 200 2.4E-66 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 2.1E-12 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 5.3E-26 T 11-10-2018 IPR001498 Impact, N-terminal AL538_09775 87d84d1b62995990b00aa4cd21e5d0fd 207 Gene3D G3DSA:3.30.230.30 3 136 1.6E-49 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily AL538_27900 a61b777666d637b46640a53f0eff267f 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_21880 22074b9f0d7f40d67301173b1712e365 297 SUPERFAMILY SSF46785 4 111 2.88E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21880 22074b9f0d7f40d67301173b1712e365 297 Pfam PF03466 LysR substrate binding domain 90 287 7.0E-39 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21880 22074b9f0d7f40d67301173b1712e365 297 Gene3D G3DSA:3.40.190.10 163 262 4.4E-57 T 11-10-2018 AL538_21880 22074b9f0d7f40d67301173b1712e365 297 SUPERFAMILY SSF53850 90 288 1.99E-42 T 11-10-2018 AL538_21880 22074b9f0d7f40d67301173b1712e365 297 Gene3D G3DSA:3.40.190.10 91 287 4.4E-57 T 11-10-2018 AL538_21880 22074b9f0d7f40d67301173b1712e365 297 Gene3D G3DSA:1.10.10.10 3 88 1.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21880 22074b9f0d7f40d67301173b1712e365 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Gene3D G3DSA:2.20.25.90 6 51 6.3E-9 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 PIRSF PIRSF036643 2 710 3.0E-126 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Gene3D G3DSA:3.40.50.740 70 513 4.8E-157 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 SUPERFAMILY SSF53706 6 567 8.38E-167 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Pfam PF01568 Molydopterin dinucleotide binding domain 580 690 1.4E-17 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Gene3D G3DSA:3.40.228.10 135 338 4.8E-157 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 SMART SM00926 3 52 9.8E-9 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Gene3D G3DSA:2.40.40.20 573 703 5.6E-22 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Gene3D G3DSA:1.10.10.1100 817 872 1.6E-13 T 11-10-2018 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Pfam PF00384 Molybdopterin oxidoreductase 56 482 3.2E-80 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Pfam PF04324 BFD-like [2Fe-2S] binding domain 817 866 7.0E-12 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 51 1.8E-10 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_25225 36ee684d1f40e92b20ea18ebd0c0144b 887 SUPERFAMILY SSF50692 554 695 2.08E-23 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AL538_16400 86793a5c0bfca8e2e1105760df43b1fb 219 Gene3D G3DSA:2.60.120.620 1 216 4.4E-53 T 11-10-2018 AL538_16400 86793a5c0bfca8e2e1105760df43b1fb 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 5.9E-53 T 11-10-2018 IPR018724 2OG-Fe dioxygenase AL538_22035 5d258663cfeb971315a0c4323e866949 122 Pfam PF13564 DoxX-like family 4 110 2.8E-17 T 11-10-2018 IPR032808 DoxX family AL538_10995 f06018b61c060e69164bc5cbb9614136 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 360 551 9.4E-21 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 Pfam PF00149 Calcineurin-like phosphoesterase 28 263 5.0E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 534 553 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 432 455 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 247 270 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 219 236 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 287 307 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 PRINTS PR01607 Apyrase family signature 26 44 2.9E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 Gene3D G3DSA:3.60.21.10 20 358 1.2E-138 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_10995 f06018b61c060e69164bc5cbb9614136 651 SUPERFAMILY SSF55816 359 601 7.98E-37 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 SUPERFAMILY SSF56300 21 358 1.79E-88 T 11-10-2018 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 Gene3D G3DSA:3.90.780.10 415 590 4.7E-50 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_10995 f06018b61c060e69164bc5cbb9614136 651 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 27 651 0.0 T 11-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PIRSF PIRSF000077 2 108 1.5E-42 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Pfam PF00085 Thioredoxin 5 106 1.1E-32 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 Gene3D G3DSA:3.40.30.10 1 108 5.6E-35 T 11-10-2018 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 SUPERFAMILY SSF52833 3 107 3.72E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_09220 1f1bc86dad0744e1dd83bbdaaa1e579f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.5E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 Gene3D G3DSA:2.170.130.10 58 179 1.8E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 SUPERFAMILY SSF56935 34 706 6.15E-126 T 11-10-2018 AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 171 4.8E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 Pfam PF00593 TonB dependent receptor 259 705 8.1E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 Gene3D G3DSA:2.40.170.20 185 706 2.0E-117 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 11-10-2018 IPR010916 TonB box, conserved site AL538_23495 ecbe8d375b6949da07ea775897a35ac8 706 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 706 9.4E-149 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_22585 74c068c1ff5b0518c704d23c249d5ed4 308 SUPERFAMILY SSF103481 39 139 2.22E-8 T 11-10-2018 AL538_22585 74c068c1ff5b0518c704d23c249d5ed4 308 Pfam PF00892 EamA-like transporter family 150 289 1.2E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_22585 74c068c1ff5b0518c704d23c249d5ed4 308 SUPERFAMILY SSF103481 204 289 1.1E-11 T 11-10-2018 AL538_25955 dfef0251dca3da80b6e0b8f41a090bed 201 Pfam PF09335 SNARE associated Golgi protein 50 149 2.4E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_20040 7a1b7bdeb90ddc72308b2aacf19200e2 317 Pfam PF01551 Peptidase family M23 169 264 8.1E-29 T 11-10-2018 IPR016047 Peptidase M23 AL538_20040 7a1b7bdeb90ddc72308b2aacf19200e2 317 SUPERFAMILY SSF51261 44 267 1.2E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_20040 7a1b7bdeb90ddc72308b2aacf19200e2 317 Gene3D G3DSA:2.70.70.10 144 265 3.2E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.1E-91 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 2.5E-70 T 11-10-2018 AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 PIRSF PIRSF002764 1 222 1.4E-84 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL538_04975 c27a76edc36d6c850d9986b30e08d5d1 222 Pfam PF03379 CcmB protein 5 219 8.5E-90 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_25930 c56a15fa20c28a291cb1b4346d424335 155 Pfam PF01590 GAF domain 49 140 2.9E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_25930 c56a15fa20c28a291cb1b4346d424335 155 Gene3D G3DSA:3.30.450.40 7 145 6.6E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_25930 c56a15fa20c28a291cb1b4346d424335 155 SUPERFAMILY SSF55781 13 129 8.97E-11 T 11-10-2018 AL538_27085 72fb10afe595040b6c5b36bf62b39cf4 314 Gene3D G3DSA:3.40.50.1980 201 310 3.4E-6 T 11-10-2018 AL538_27085 72fb10afe595040b6c5b36bf62b39cf4 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 55 307 3.0E-24 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AL538_27085 72fb10afe595040b6c5b36bf62b39cf4 314 Gene3D G3DSA:3.40.50.1980 52 198 2.2E-18 T 11-10-2018 AL538_27085 72fb10afe595040b6c5b36bf62b39cf4 314 SUPERFAMILY SSF53807 35 306 8.34E-51 T 11-10-2018 AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 SUPERFAMILY SSF53901 1 251 8.35E-68 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.2E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 Gene3D G3DSA:3.40.47.10 1 253 7.8E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 Gene3D G3DSA:3.40.47.10 258 401 1.2E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 3.0E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 SUPERFAMILY SSF53901 213 401 4.38E-62 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_04850 e0e7bc3f9b3063fa0fb5c4a90e81345b 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 8.4E-45 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL538_13895 8a47a012ae40eaeca15fb5cbfb5cfa5a 323 Pfam PF13406 Transglycosylase SLT domain 24 319 1.6E-110 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AL538_13895 8a47a012ae40eaeca15fb5cbfb5cfa5a 323 SUPERFAMILY SSF53955 9 321 1.03E-100 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_13895 8a47a012ae40eaeca15fb5cbfb5cfa5a 323 Gene3D G3DSA:1.10.8.350 35 199 4.5E-93 T 11-10-2018 AL538_13895 8a47a012ae40eaeca15fb5cbfb5cfa5a 323 Gene3D G3DSA:1.10.530.10 66 318 4.5E-93 T 11-10-2018 AL538_13895 8a47a012ae40eaeca15fb5cbfb5cfa5a 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 322 8.2E-112 T 11-10-2018 IPR011970 Lytic murein transglycosylase AL538_03275 0ab03316a691883a90733dd7e8b9df3f 417 Gene3D G3DSA:3.30.360.10 159 355 2.5E-143 T 11-10-2018 AL538_03275 0ab03316a691883a90733dd7e8b9df3f 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.7E-32 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AL538_03275 0ab03316a691883a90733dd7e8b9df3f 417 SUPERFAMILY SSF51735 2 179 6.3E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_03275 0ab03316a691883a90733dd7e8b9df3f 417 Gene3D G3DSA:3.40.50.720 4 398 2.5E-143 T 11-10-2018 AL538_03275 0ab03316a691883a90733dd7e8b9df3f 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 392 2.8E-29 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AL538_18690 5a7ff6cfad5b53937afbf44d8c1a802b 261 Gene3D G3DSA:3.20.20.450 19 251 2.0E-25 T 11-10-2018 IPR035919 EAL domain superfamily AL538_18690 5a7ff6cfad5b53937afbf44d8c1a802b 261 Pfam PF00563 EAL domain 27 219 1.3E-23 T 11-10-2018 IPR001633 EAL domain AL538_18690 5a7ff6cfad5b53937afbf44d8c1a802b 261 SUPERFAMILY SSF141868 27 245 8.24E-29 T 11-10-2018 IPR035919 EAL domain superfamily AL538_18690 5a7ff6cfad5b53937afbf44d8c1a802b 261 SMART SM00052 6 239 3.5E-8 T 11-10-2018 IPR001633 EAL domain AL538_01400 9087517f55d3f26686392e9c1fb7ac57 181 Gene3D G3DSA:3.40.630.30 24 181 8.9E-40 T 11-10-2018 AL538_01400 9087517f55d3f26686392e9c1fb7ac57 181 SUPERFAMILY SSF55729 27 149 4.49E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_01400 9087517f55d3f26686392e9c1fb7ac57 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 4.7E-62 T 11-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 AL538_01400 9087517f55d3f26686392e9c1fb7ac57 181 Pfam PF00583 Acetyltransferase (GNAT) family 60 146 6.6E-15 T 11-10-2018 IPR000182 GNAT domain AL538_01400 9087517f55d3f26686392e9c1fb7ac57 181 PIRSF PIRSF037663 26 175 8.6E-13 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted AL538_22265 247fe4d70a24c14be5f48f6c8c061851 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_22265 247fe4d70a24c14be5f48f6c8c061851 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 11-10-2018 AL538_22265 247fe4d70a24c14be5f48f6c8c061851 153 Gene3D G3DSA:1.20.5.830 111 153 4.7E-29 T 11-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily AL538_22265 247fe4d70a24c14be5f48f6c8c061851 153 Gene3D G3DSA:1.10.287.790 61 110 4.2E-31 T 11-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily AL538_22265 247fe4d70a24c14be5f48f6c8c061851 153 SUPERFAMILY SSF46689 1 74 1.03E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_12525 4b88bdc3c63277a32d9686b6fcc19166 135 SUPERFAMILY SSF82649 2 129 2.88E-39 T 11-10-2018 AL538_12525 4b88bdc3c63277a32d9686b6fcc19166 135 Gene3D G3DSA:3.90.1010.10 1 135 4.3E-44 T 11-10-2018 AL538_12525 4b88bdc3c63277a32d9686b6fcc19166 135 Pfam PF02657 Fe-S metabolism associated domain 8 126 8.5E-40 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 Pfam PF00581 Rhodanese-like domain 157 268 2.6E-11 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 Pfam PF00581 Rhodanese-like domain 6 124 8.2E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 Gene3D G3DSA:3.40.250.10 154 276 1.2E-41 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 SUPERFAMILY SSF52821 3 137 3.54E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 SMART SM00450 152 272 3.6E-14 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 SMART SM00450 5 128 3.6E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 Gene3D G3DSA:3.40.250.10 1 142 4.9E-37 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_26120 cbf0bf53510f2f4880292f3606e7ffef 276 SUPERFAMILY SSF52821 156 275 2.75E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 SUPERFAMILY SSF52540 114 338 1.09E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 Gene3D G3DSA:3.40.50.300 103 276 1.7E-50 T 11-10-2018 AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 Pfam PF03193 RsgA GTPase 100 277 3.2E-58 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 Gene3D G3DSA:1.10.40.50 277 351 9.8E-25 T 11-10-2018 AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.778 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 4.1E-92 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL538_08190 b8dd3e136b644a371ecbbab2d3d20d78 354 Gene3D G3DSA:2.40.50.140 36 102 1.2E-21 T 11-10-2018 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 TIGRFAM TIGR03356 BGL: beta-galactosidase 16 437 6.0E-183 T 11-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 350 358 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 Gene3D G3DSA:3.20.20.80 9 446 5.2E-160 T 11-10-2018 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 SUPERFAMILY SSF51445 16 442 1.75E-153 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 Pfam PF00232 Glycosyl hydrolase family 1 16 441 5.5E-146 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 1.0E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 1.0E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 1.0E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 350 358 1.0E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_18820 331f64f6e7d16ed4a7e82f42a793c531 449 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.0E-22 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 Gene3D G3DSA:1.10.10.10 2 81 5.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 Pfam PF00480 ROK family 88 390 1.0E-70 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 SUPERFAMILY SSF53067 86 395 3.22E-55 T 11-10-2018 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 Gene3D G3DSA:3.30.420.40 208 377 2.8E-110 T 11-10-2018 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 Gene3D G3DSA:3.30.420.40 91 387 2.8E-110 T 11-10-2018 AL538_03825 9b0bff1c8c367aa29c8223b145e720b6 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 Gene3D G3DSA:1.10.10.60 201 252 8.2E-13 T 11-10-2018 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 SUPERFAMILY SSF46689 255 306 2.69E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 SUPERFAMILY SSF51182 27 102 1.9E-7 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 256 298 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 Pfam PF12833 Helix-turn-helix domain 225 303 4.3E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 SUPERFAMILY SSF46689 203 253 2.24E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 SMART SM00342 219 302 1.4E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 8.0E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 8.0E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 Gene3D G3DSA:2.60.120.10 16 117 2.6E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_05190 8cfd5bce71f2b4ae7cfc61bd01078fe9 336 Gene3D G3DSA:1.10.10.60 253 308 5.9E-19 T 11-10-2018 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 Gene3D G3DSA:3.40.190.10 93 299 6.1E-19 T 11-10-2018 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 7.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 SUPERFAMILY SSF53850 93 301 2.17E-17 T 11-10-2018 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 SUPERFAMILY SSF46785 7 89 2.54E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 Gene3D G3DSA:3.40.190.10 174 272 6.1E-19 T 11-10-2018 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 Pfam PF03466 LysR substrate binding domain 98 303 1.3E-8 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 Gene3D G3DSA:1.10.10.10 1 91 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12250 eb6db70c28c16f76f84163db8e2b472b 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 3.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19460 a4f74d607b7f3e02adb062222623aae9 470 SUPERFAMILY SSF49299 134 223 1.96E-6 T 11-10-2018 IPR035986 PKD domain superfamily AL538_19460 a4f74d607b7f3e02adb062222623aae9 470 Gene3D G3DSA:2.60.40.10 38 135 4.2E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19460 a4f74d607b7f3e02adb062222623aae9 470 Gene3D G3DSA:2.60.40.10 234 327 7.7E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19460 a4f74d607b7f3e02adb062222623aae9 470 Gene3D G3DSA:2.60.40.10 142 231 2.5E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_19460 a4f74d607b7f3e02adb062222623aae9 470 SUPERFAMILY SSF49299 229 320 2.09E-8 T 11-10-2018 IPR035986 PKD domain superfamily AL538_18465 b943e4a9ab370498e670bdb0ca28c4d6 287 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 53.186 T 11-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AL538_18465 b943e4a9ab370498e670bdb0ca28c4d6 287 Gene3D G3DSA:3.40.1190.20 1 286 2.8E-87 T 11-10-2018 IPR029056 Ribokinase-like AL538_18465 b943e4a9ab370498e670bdb0ca28c4d6 287 SUPERFAMILY SSF53613 2 275 4.99E-70 T 11-10-2018 IPR029056 Ribokinase-like AL538_18465 b943e4a9ab370498e670bdb0ca28c4d6 287 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.8E-21 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL538_18465 b943e4a9ab370498e670bdb0ca28c4d6 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 7.2E-103 T 11-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL538_09280 57edf13bc675a0a20ddcc8d70836f77f 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 1.4E-23 T 11-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane AL538_14810 df9c2e2b00a691e4b289a0f9d791e2bf 105 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 4.1E-7 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 AL538_14810 df9c2e2b00a691e4b289a0f9d791e2bf 105 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 79 98 - T 11-10-2018 IPR001876 Zinc finger, RanBP2-type AL538_05295 935376f2dc7bd20aef98ecf7e29d3a44 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 2.0E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL538_05295 935376f2dc7bd20aef98ecf7e29d3a44 417 Pfam PF00860 Permease family 3 371 9.4E-91 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL538_05295 935376f2dc7bd20aef98ecf7e29d3a44 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL538_18600 73375cf3f0f86172cad7b2197f974f49 415 Gene3D G3DSA:1.20.1250.20 12 206 1.6E-7 T 11-10-2018 AL538_18600 73375cf3f0f86172cad7b2197f974f49 415 Gene3D G3DSA:1.20.1250.20 211 410 4.4E-12 T 11-10-2018 AL538_18600 73375cf3f0f86172cad7b2197f974f49 415 SUPERFAMILY SSF103473 13 407 8.76E-29 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_23075 118e91525cf102148498f45ce9695734 521 SUPERFAMILY SSF53649 23 472 8.72E-122 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_23075 118e91525cf102148498f45ce9695734 521 Gene3D G3DSA:3.40.720.10 24 426 5.4E-99 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_23075 118e91525cf102148498f45ce9695734 521 Pfam PF00884 Sulfatase 27 353 9.0E-67 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_23075 118e91525cf102148498f45ce9695734 521 Pfam PF14707 C-terminal region of aryl-sulfatase 392 490 4.5E-7 T 11-10-2018 AL538_00805 3210faa588aa07da376d836b5732f6ae 404 Pfam PF08668 HDOD domain 137 272 2.3E-7 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL538_00805 3210faa588aa07da376d836b5732f6ae 404 Gene3D G3DSA:1.10.3210.10 119 287 3.6E-9 T 11-10-2018 AL538_00805 3210faa588aa07da376d836b5732f6ae 404 SUPERFAMILY SSF109604 133 276 3.77E-9 T 11-10-2018 AL538_17045 3b131d505b8c093afb27a8cfcf3d3e8a 160 Pfam PF00583 Acetyltransferase (GNAT) family 32 146 1.8E-17 T 11-10-2018 IPR000182 GNAT domain AL538_17045 3b131d505b8c093afb27a8cfcf3d3e8a 160 Gene3D G3DSA:3.40.630.30 3 137 1.1E-33 T 11-10-2018 AL538_17045 3b131d505b8c093afb27a8cfcf3d3e8a 160 SUPERFAMILY SSF55729 4 146 1.8E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_10195 25b79f5f91292232c30f9da925618811 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL538_10195 25b79f5f91292232c30f9da925618811 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.0E-137 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_10195 25b79f5f91292232c30f9da925618811 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_10195 25b79f5f91292232c30f9da925618811 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL538_10195 25b79f5f91292232c30f9da925618811 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_10195 25b79f5f91292232c30f9da925618811 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AL538_10195 25b79f5f91292232c30f9da925618811 469 SUPERFAMILY SSF55931 102 468 2.94E-137 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AL538_10195 25b79f5f91292232c30f9da925618811 469 Gene3D G3DSA:3.30.590.10 105 457 1.8E-148 T 11-10-2018 AL538_10195 25b79f5f91292232c30f9da925618811 469 SMART SM01230 102 379 3.9E-153 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_10195 25b79f5f91292232c30f9da925618811 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.5E-211 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_10195 25b79f5f91292232c30f9da925618811 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AL538_06105 3205a12eb8227fec6fcf0fffde45d12e 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 56 128 4.0E-6 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_06105 3205a12eb8227fec6fcf0fffde45d12e 132 PIRSF PIRSF029225 2 132 9.3E-44 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_06105 3205a12eb8227fec6fcf0fffde45d12e 132 SUPERFAMILY SSF102220 33 131 1.7E-28 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_06105 3205a12eb8227fec6fcf0fffde45d12e 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 3.0E-37 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_06105 3205a12eb8227fec6fcf0fffde45d12e 132 Gene3D G3DSA:3.40.50.10220 35 132 2.7E-30 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_07920 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.7E-18 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AL538_07920 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 11-10-2018 IPR013559 YheO-like AL538_07920 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 9.3E-36 T 11-10-2018 IPR013559 YheO-like AL538_27590 2806363e9ec8a44fb3816714e00cbd8a 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 8.7E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_19750 2aac7ca13ec4913ff36b48b63dca3b0f 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 3.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_19750 2aac7ca13ec4913ff36b48b63dca3b0f 205 SUPERFAMILY SSF46689 5 71 9.98E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19750 2aac7ca13ec4913ff36b48b63dca3b0f 205 Gene3D G3DSA:1.10.357.10 9 193 7.2E-17 T 11-10-2018 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 5.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 5.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 Pfam PF12833 Helix-turn-helix domain 213 291 7.1E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 SUPERFAMILY SSF51215 35 160 4.45E-9 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_24570 670bf844e4a7db892b079048eb7960f0 298 Gene3D G3DSA:2.60.120.280 42 153 3.8E-6 T 11-10-2018 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 SUPERFAMILY SSF46689 243 293 3.19E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 Gene3D G3DSA:1.10.10.60 188 297 1.4E-23 T 11-10-2018 AL538_24570 670bf844e4a7db892b079048eb7960f0 298 SMART SM00342 207 290 1.3E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_25685 859bb91e0f29f5d58f64d532f7c16ff3 316 Pfam PF01032 FecCD transport family 27 312 1.2E-53 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_25685 859bb91e0f29f5d58f64d532f7c16ff3 316 SUPERFAMILY SSF81345 6 312 8.11E-59 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_25685 859bb91e0f29f5d58f64d532f7c16ff3 316 Gene3D G3DSA:1.10.3470.10 4 315 1.2E-57 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 3.0E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 SUPERFAMILY SSF81271 395 461 5.01E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 SUPERFAMILY SSF81301 195 406 5.89E-62 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Gene3D G3DSA:1.10.3210.10 48 205 1.5E-34 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 SUPERFAMILY SSF55021 662 737 4.21E-10 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Pfam PF13291 ACT domain 661 737 4.4E-15 T 11-10-2018 IPR002912 ACT domain AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Gene3D G3DSA:3.30.460.10 208 340 3.2E-48 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Gene3D G3DSA:3.10.20.30 396 469 4.9E-31 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 SUPERFAMILY SSF109604 53 205 2.04E-41 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 SMART SM00954 250 360 2.9E-64 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Gene3D G3DSA:3.30.70.260 660 739 1.1E-14 T 11-10-2018 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 1.7E-182 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Pfam PF13328 HD domain 50 190 5.8E-35 T 11-10-2018 IPR003607 HD/PDEase domain AL538_06760 e306cbe07063892080fe3eefa2e0b241 739 Pfam PF02824 TGS domain 402 461 1.0E-21 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AL538_22100 221d8eee26d35074c5eead1c0416308e 269 SUPERFAMILY SSF52540 7 153 1.84E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_22100 221d8eee26d35074c5eead1c0416308e 269 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 255 1.4E-47 T 11-10-2018 IPR018831 Uncharacterised protein family NKWYS AL538_04680 cc45b06d43f3dd51717644be939fe211 280 PIRSF PIRSF018249 1 273 3.0E-85 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AL538_04680 cc45b06d43f3dd51717644be939fe211 280 Gene3D G3DSA:3.40.50.150 1 273 2.5E-80 T 11-10-2018 AL538_04680 cc45b06d43f3dd51717644be939fe211 280 SUPERFAMILY SSF53335 4 255 2.69E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_04680 cc45b06d43f3dd51717644be939fe211 280 Pfam PF13847 Methyltransferase domain 88 220 7.4E-14 T 11-10-2018 IPR025714 Methyltransferase domain AL538_26690 4781626d6968bf3506710fb5d457c062 283 SUPERFAMILY SSF56601 21 281 2.18E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_26690 4781626d6968bf3506710fb5d457c062 283 Gene3D G3DSA:3.40.710.10 20 281 4.6E-67 T 11-10-2018 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 1.9E-56 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AL538_26690 4781626d6968bf3506710fb5d457c062 283 Pfam PF13354 Beta-lactamase enzyme family 45 252 2.6E-33 T 11-10-2018 AL538_26690 4781626d6968bf3506710fb5d457c062 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 11-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 SUPERFAMILY SSF54680 337 437 6.28E-29 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 2.0E-48 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 PIRSF PIRSF000478 1 438 2.1E-148 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Gene3D G3DSA:1.20.970.10 7 195 2.2E-127 T 11-10-2018 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 1.0E-213 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.6E-23 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 SMART SM00941 350 424 6.3E-29 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.6E-20 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Gene3D G3DSA:3.90.1170.30 337 432 1.3E-29 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 5.7E-160 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 SUPERFAMILY SSF52418 73 334 1.03E-88 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Gene3D G3DSA:3.40.1030.10 70 322 2.2E-127 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 SUPERFAMILY SSF47648 2 70 6.67E-21 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_06070 34f4b3a1d8709657987cb0d6c4c545a7 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.557 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 AL538_17235 84d9de25d1a62cdab33c0de9d303ac7f 318 Gene3D G3DSA:3.40.50.300 17 183 7.5E-46 T 11-10-2018 AL538_17235 84d9de25d1a62cdab33c0de9d303ac7f 318 PIRSF PIRSF002849 1 318 4.8E-129 T 11-10-2018 AL538_17235 84d9de25d1a62cdab33c0de9d303ac7f 318 Gene3D G3DSA:1.10.8.300 199 315 3.2E-40 T 11-10-2018 AL538_17235 84d9de25d1a62cdab33c0de9d303ac7f 318 SUPERFAMILY SSF52540 6 290 3.4E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17235 84d9de25d1a62cdab33c0de9d303ac7f 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.3E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL538_27310 3028478d42e66f98fb45e71e7a6a13c5 249 Pfam PF09356 Phage conserved hypothetical protein BR0599 190 239 2.7E-12 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal AL538_27310 3028478d42e66f98fb45e71e7a6a13c5 249 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 12 142 7.6E-5 T 11-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal AL538_20180 68e8203a4a7f279089621ea0eae5e56c 539 SUPERFAMILY SSF54060 292 531 5.65E-51 T 11-10-2018 AL538_20180 68e8203a4a7f279089621ea0eae5e56c 539 SUPERFAMILY SSF49785 23 160 3.57E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_20180 68e8203a4a7f279089621ea0eae5e56c 539 Gene3D G3DSA:2.60.120.260 23 161 1.2E-11 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_20180 68e8203a4a7f279089621ea0eae5e56c 539 Pfam PF02018 Carbohydrate binding domain 23 143 1.2E-6 T 11-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AL538_20180 68e8203a4a7f279089621ea0eae5e56c 539 Pfam PF04231 Endonuclease I 295 531 1.4E-102 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 AL538_12205 b65a2d981ef9c606dbb513439444d98b 321 Gene3D G3DSA:3.40.190.10 123 265 1.7E-96 T 11-10-2018 AL538_12205 b65a2d981ef9c606dbb513439444d98b 321 Pfam PF12849 PBP superfamily domain 37 293 2.0E-27 T 11-10-2018 IPR024370 PBP domain AL538_12205 b65a2d981ef9c606dbb513439444d98b 321 Gene3D G3DSA:3.40.190.10 38 309 1.7E-96 T 11-10-2018 AL538_12205 b65a2d981ef9c606dbb513439444d98b 321 SUPERFAMILY SSF53850 36 318 2.83E-65 T 11-10-2018 AL538_12205 b65a2d981ef9c606dbb513439444d98b 321 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 10 307 1.9E-75 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 SUPERFAMILY SSF52540 1 193 7.56E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.738 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF00406 Adenylate kinase 5 185 2.8E-59 T 11-10-2018 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 Gene3D G3DSA:3.40.50.300 1 214 1.0E-77 T 11-10-2018 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.0E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.0E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AL538_13630 327d59d08bc20a54f77cf9065fa45a40 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 8.8E-75 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 Pfam PF00682 HMGL-like 8 273 1.6E-64 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 SUPERFAMILY SSF51230 528 602 8.9E-22 T 11-10-2018 IPR011053 Single hybrid motif AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 559 576 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 SUPERFAMILY SSF51569 5 302 1.54E-92 T 11-10-2018 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 Gene3D G3DSA:3.20.20.70 1 466 4.3E-174 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 Pfam PF00364 Biotin-requiring enzyme 542 602 2.0E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 597 7.4E-279 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 Pfam PF02436 Conserved carboxylase domain 295 506 1.0E-56 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 Gene3D G3DSA:2.40.50.100 526 602 2.3E-25 T 11-10-2018 AL538_01545 ab8151c938893efa4b2e74c1e6e912e4 603 SUPERFAMILY SSF89000 300 462 8.63E-49 T 11-10-2018 AL538_07905 76df82bd4ad2152899f05f241b03babb 91 SUPERFAMILY SSF75169 1 90 1.32E-22 T 11-10-2018 IPR027396 DsrEFH-like AL538_07905 76df82bd4ad2152899f05f241b03babb 91 Gene3D G3DSA:3.40.1260.10 1 90 1.8E-25 T 11-10-2018 IPR027396 DsrEFH-like AL538_07905 76df82bd4ad2152899f05f241b03babb 91 Pfam PF04077 DsrH like protein 10 86 5.1E-23 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL538_07905 76df82bd4ad2152899f05f241b03babb 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 4.3E-25 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 Pfam PF03466 LysR substrate binding domain 96 299 1.2E-37 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_12270 5c5f29db9f3004c95aec095998578a36 301 Gene3D G3DSA:3.40.190.10 168 269 3.1E-54 T 11-10-2018 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 4.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 SUPERFAMILY SSF46785 4 117 1.6E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_12270 5c5f29db9f3004c95aec095998578a36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 SUPERFAMILY SSF53850 95 300 5.35E-35 T 11-10-2018 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 Gene3D G3DSA:3.40.190.10 98 298 3.1E-54 T 11-10-2018 AL538_12270 5c5f29db9f3004c95aec095998578a36 301 Gene3D G3DSA:1.10.10.10 2 89 3.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 Gene3D G3DSA:1.10.8.420 1 53 3.5E-19 T 11-10-2018 AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 102.348 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 SMART SM00493 81 166 7.3E-17 T 11-10-2018 IPR006171 TOPRIM domain AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 SUPERFAMILY SSF111304 2 199 2.62E-72 T 11-10-2018 IPR023627 Recombination protein RecR AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 2.2E-78 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 Pfam PF13662 Toprim domain 82 172 3.1E-23 T 11-10-2018 IPR006171 TOPRIM domain AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 Pfam PF02132 RecR protein 41 77 2.1E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AL538_04770 8213426c9d1935955552ca8b5b3a1e2a 199 Gene3D G3DSA:3.40.1360.10 78 199 6.6E-39 T 11-10-2018 AL538_20605 3af52e7e6dad500da5fd63a4555dbd66 116 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 9 97 3.0E-10 T 11-10-2018 IPR035242 Protein of unknown function DUF5329 AL538_20605 3af52e7e6dad500da5fd63a4555dbd66 116 Pfam PF17263 Family of unknown function (DUF5329) 22 109 1.4E-31 T 11-10-2018 IPR035242 Protein of unknown function DUF5329 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:1.10.10.10 6 59 5.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 8.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 8.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 8.3E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 SMART SM00344 8 115 4.6E-40 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 Gene3D G3DSA:3.30.70.920 60 142 2.2E-31 T 11-10-2018 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF54909 69 153 5.36E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 8.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_10025 7de400fb26ef1eab46c30c645c0bf194 154 SUPERFAMILY SSF46785 7 68 3.44E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23165 789d169bd29677f049670924db35c708 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.3E-106 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 Pfam PF00231 ATP synthase 3 285 5.6E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.732 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.7E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.7E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.7E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23165 789d169bd29677f049670924db35c708 286 Gene3D G3DSA:1.10.287.80 6 282 1.5E-108 T 11-10-2018 AL538_23165 789d169bd29677f049670924db35c708 286 Gene3D G3DSA:3.40.1380.10 61 205 1.5E-108 T 11-10-2018 AL538_23165 789d169bd29677f049670924db35c708 286 SUPERFAMILY SSF52943 2 286 4.19E-96 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 Gene3D G3DSA:3.30.950.10 127 252 9.4E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.2E-93 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 Gene3D G3DSA:3.40.1010.10 10 126 2.4E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 SUPERFAMILY SSF53790 7 250 3.79E-78 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL538_24620 5c89d7828df9874738be475477f7d8f4 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 1.4E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL538_25870 bc06a24ad967113e26b98cf172eaadd2 218 Pfam PF00881 Nitroreductase family 10 193 9.4E-20 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_25870 bc06a24ad967113e26b98cf172eaadd2 218 SUPERFAMILY SSF55469 6 216 3.4E-55 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_25870 bc06a24ad967113e26b98cf172eaadd2 218 Gene3D G3DSA:3.40.109.10 1 217 1.6E-49 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 205 3.0E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 Gene3D G3DSA:3.40.50.2300 5 138 5.7E-8 T 11-10-2018 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 SMART SM00421 152 209 2.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 Gene3D G3DSA:1.10.10.10 147 211 1.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_22740 5b1b2ce4ee86094ab70cdb4b7a2a7d32 211 SUPERFAMILY SSF46894 147 209 2.35E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 PIRSF PIRSF015589 1 694 5.6E-253 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.9E-145 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Gene3D G3DSA:3.30.870.10 500 686 5.5E-74 T 11-10-2018 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 SUPERFAMILY SSF56024 315 497 1.26E-54 T 11-10-2018 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 SUPERFAMILY SSF140356 4 104 5.49E-32 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 4.8E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 2.4E-46 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Gene3D G3DSA:1.20.58.310 9 109 3.5E-36 T 11-10-2018 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 SUPERFAMILY SSF56024 500 684 5.61E-70 T 11-10-2018 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 1.2E-263 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Gene3D G3DSA:3.30.870.10 319 499 4.3E-72 T 11-10-2018 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.396 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 Gene3D G3DSA:3.30.1840.10 110 307 1.3E-74 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AL538_12215 d7105ab431219a3d8e148b8ad04e7d77 696 SUPERFAMILY SSF143724 107 313 2.55E-63 T 11-10-2018 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 SUPERFAMILY SSF52283 1 136 4.73E-41 T 11-10-2018 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 SUPERFAMILY SSF51735 103 299 1.69E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 5.3E-51 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 1.2E-33 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 Gene3D G3DSA:3.40.50.720 4 318 5.2E-133 T 11-10-2018 AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_20435 97fc150b66ee1e2c8181e19f56a33cee 331 Gene3D G3DSA:3.40.50.720 103 298 5.2E-133 T 11-10-2018 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.36 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.6E-57 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.30.70.260 125 196 1.4E-77 T 11-10-2018 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.6E-68 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF100950 1 146 2.56E-46 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 Gene3D G3DSA:3.40.50.1360 7 207 1.4E-77 T 11-10-2018 AL538_06890 02fe49bee70f73d50587f53ebe37d6bd 218 SUPERFAMILY SSF75445 127 198 1.27E-23 T 11-10-2018 AL538_18665 f5ee22b4ffd2fc5ca08fe0f189e5dc55 855 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 664 1.6E-76 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_18665 f5ee22b4ffd2fc5ca08fe0f189e5dc55 855 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 27 721 5.8E-211 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AL538_18665 f5ee22b4ffd2fc5ca08fe0f189e5dc55 855 Pfam PF11874 Domain of unknown function (DUF3394) 670 846 1.8E-68 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 AL538_03580 b261b22ad65fea2dc8a148d47aea6675 495 Gene3D G3DSA:3.60.10.10 92 365 9.0E-14 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_03580 b261b22ad65fea2dc8a148d47aea6675 495 SUPERFAMILY SSF56219 97 363 1.31E-16 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_03580 b261b22ad65fea2dc8a148d47aea6675 495 SMART SM00128 94 371 0.0031 T 11-10-2018 IPR000300 Inositol polyphosphate-related phosphatase GO:0046856 AL538_17810 ab3b87985d7c14e3719c051c578fa96d 289 Gene3D G3DSA:3.40.50.720 6 251 3.6E-38 T 11-10-2018 AL538_17810 ab3b87985d7c14e3719c051c578fa96d 289 SUPERFAMILY SSF51735 1 278 1.86E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_17810 ab3b87985d7c14e3719c051c578fa96d 289 Pfam PF13460 NAD(P)H-binding 11 197 5.8E-22 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_14365 0cbdd67eb1bbbd78b2870802cf19df16 290 SMART SM00978 159 290 2.4E-36 T 11-10-2018 IPR007379 Tim44-like domain AL538_14365 0cbdd67eb1bbbd78b2870802cf19df16 290 Pfam PF04280 Tim44-like domain 168 289 1.3E-13 T 11-10-2018 IPR007379 Tim44-like domain AL538_14365 0cbdd67eb1bbbd78b2870802cf19df16 290 Gene3D G3DSA:3.10.450.240 165 289 3.3E-5 T 11-10-2018 AL538_14365 0cbdd67eb1bbbd78b2870802cf19df16 290 SUPERFAMILY SSF54427 169 289 3.77E-15 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_14365 0cbdd67eb1bbbd78b2870802cf19df16 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 124 9.1E-6 T 11-10-2018 IPR010903 Protein of unknown function DUF1517 AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 Pfam PF00263 Bacterial type II and III secretion system protein 421 579 3.6E-46 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 525 558 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 579 5.0E-164 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 Pfam PF03958 Bacterial type II/III secretion system short domain 254 319 6.8E-13 T 11-10-2018 IPR005644 NolW-like AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 Gene3D G3DSA:3.55.50.30 138 251 2.8E-36 T 11-10-2018 AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 Gene3D G3DSA:2.60.40.3470 25 137 5.0E-14 T 11-10-2018 AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 417 441 7.8E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 7.8E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 567 581 7.8E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 462 7.8E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 544 562 7.8E-20 T 11-10-2018 IPR001775 GspD/PilQ family AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 Gene3D G3DSA:3.30.1370.120 252 315 1.3E-11 T 11-10-2018 IPR038591 NolW-like superfamily AL538_07765 a1bac3db9447a60f97c089a2a0a615ab 581 SMART SM00965 180 228 2.2E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 9.7E-119 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 406 456 3.3E-6 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.5E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 SUPERFAMILY SSF64518 133 457 8.37E-26 T 11-10-2018 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.3E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 1.3E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.3E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_21075 29c8e812c53ea50104d1ac19f5e6f380 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.3E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AL538_13845 66062d879e774636ce0a858d5e8341e6 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 5.5E-69 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AL538_13845 66062d879e774636ce0a858d5e8341e6 233 SUPERFAMILY SSF53067 111 219 1.42E-26 T 11-10-2018 AL538_13845 66062d879e774636ce0a858d5e8341e6 233 Pfam PF00814 Glycoprotease family 30 152 1.1E-32 T 11-10-2018 IPR000905 Gcp-like domain AL538_13845 66062d879e774636ce0a858d5e8341e6 233 SUPERFAMILY SSF53067 4 107 2.29E-32 T 11-10-2018 AL538_13845 66062d879e774636ce0a858d5e8341e6 233 Gene3D G3DSA:3.30.420.40 96 190 1.5E-85 T 11-10-2018 AL538_13845 66062d879e774636ce0a858d5e8341e6 233 Gene3D G3DSA:3.30.420.40 5 202 1.5E-85 T 11-10-2018 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 SMART SM00342 236 319 3.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 Pfam PF12833 Helix-turn-helix domain 242 320 1.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 Pfam PF01965 DJ-1/PfpI family 25 182 1.6E-11 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 Gene3D G3DSA:3.40.50.880 2 209 1.0E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_01160 b24120e30b92cd17f8b392454b87d337 326 SUPERFAMILY SSF46689 273 321 1.16E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 Gene3D G3DSA:1.10.10.60 217 325 2.0E-22 T 11-10-2018 AL538_01160 b24120e30b92cd17f8b392454b87d337 326 SUPERFAMILY SSF52317 26 190 1.53E-25 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_09045 38e148ad76d771f53f798bdb37c96b6d 405 Gene3D G3DSA:1.20.1250.20 207 404 1.3E-11 T 11-10-2018 AL538_09045 38e148ad76d771f53f798bdb37c96b6d 405 Pfam PF07690 Major Facilitator Superfamily 18 337 3.3E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_09045 38e148ad76d771f53f798bdb37c96b6d 405 SUPERFAMILY SSF103473 9 400 2.35E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_09045 38e148ad76d771f53f798bdb37c96b6d 405 Gene3D G3DSA:1.20.1250.20 8 201 1.9E-14 T 11-10-2018 AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.5E-41 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.6E-30 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 SUPERFAMILY SSF117143 93 223 9.68E-35 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_13460 67b582452ff85c445d81e2b6b6d7e9bd 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 4.3E-117 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AL538_20020 7b20f3d7db27b48d3e0ac569e214215a 108 SUPERFAMILY SSF54292 20 102 1.44E-12 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AL538_20020 7b20f3d7db27b48d3e0ac569e214215a 108 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 67 2.7E-4 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AL538_20020 7b20f3d7db27b48d3e0ac569e214215a 108 Gene3D G3DSA:3.10.20.740 7 107 1.0E-9 T 11-10-2018 AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 SMART SM00267 226 392 2.7E-13 T 11-10-2018 IPR000160 GGDEF domain AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 SUPERFAMILY SSF141868 411 636 5.62E-41 T 11-10-2018 IPR035919 EAL domain superfamily AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 3.3E-13 T 11-10-2018 IPR000160 GGDEF domain AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Gene3D G3DSA:3.30.1040.50 102 151 4.3E-18 T 11-10-2018 AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 SUPERFAMILY SSF55073 243 391 7.45E-18 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Pfam PF00563 EAL domain 411 635 3.6E-39 T 11-10-2018 IPR001633 EAL domain AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Gene3D G3DSA:3.30.70.270 223 392 3.0E-21 T 11-10-2018 AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Gene3D G3DSA:3.20.20.450 401 636 7.1E-40 T 11-10-2018 IPR035919 EAL domain superfamily AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 4.7E-40 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain AL538_19530 3ae5307f9a8a4cc9838926a611b011cf 637 SMART SM00052 403 635 6.2E-10 T 11-10-2018 IPR001633 EAL domain AL538_06360 6c7ee2ee98430582f7ce7f088d771657 337 Gene3D G3DSA:3.40.190.10 25 297 9.6E-127 T 11-10-2018 AL538_06360 6c7ee2ee98430582f7ce7f088d771657 337 Gene3D G3DSA:3.40.190.10 120 328 9.6E-127 T 11-10-2018 AL538_06360 6c7ee2ee98430582f7ce7f088d771657 337 SUPERFAMILY SSF53850 24 332 1.81E-75 T 11-10-2018 AL538_06360 6c7ee2ee98430582f7ce7f088d771657 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 9.0E-19 T 11-10-2018 AL538_06360 6c7ee2ee98430582f7ce7f088d771657 337 PIRSF PIRSF002825 1 337 3.1E-102 T 11-10-2018 IPR026045 Ferric binding protein AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 Gene3D G3DSA:1.10.287.470 115 174 9.5E-50 T 11-10-2018 AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 SUPERFAMILY SSF111369 69 283 3.01E-32 T 11-10-2018 AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 356 1.8E-48 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 275 9.5E-22 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 Gene3D G3DSA:2.40.30.170 68 288 9.5E-50 T 11-10-2018 AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 Gene3D G3DSA:2.40.50.100 80 208 9.5E-50 T 11-10-2018 AL538_06265 c5eb63eb58f9a1229719e51a47a2e6f0 371 Gene3D G3DSA:2.40.420.20 289 355 9.5E-50 T 11-10-2018 AL538_15390 e231be9e85ca833febf915f6a71852f1 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_15390 e231be9e85ca833febf915f6a71852f1 282 SUPERFAMILY SSF52540 35 262 1.41E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15390 e231be9e85ca833febf915f6a71852f1 282 SMART SM00382 49 238 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15390 e231be9e85ca833febf915f6a71852f1 282 Gene3D G3DSA:3.40.50.300 17 281 3.5E-74 T 11-10-2018 AL538_15390 e231be9e85ca833febf915f6a71852f1 282 Pfam PF00005 ABC transporter 51 190 8.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 Pfam PF00072 Response regulator receiver domain 26 133 3.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 SUPERFAMILY SSF52172 19 149 1.42E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 Pfam PF00486 Transcriptional regulatory protein, C terminal 176 251 5.7E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 Gene3D G3DSA:3.40.50.2300 8 149 2.1E-37 T 11-10-2018 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 Gene3D G3DSA:1.10.10.10 150 252 6.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 SMART SM00862 175 251 7.3E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 SUPERFAMILY SSF46894 160 251 4.82E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_23070 822820e5637e0a4b7e4092f7e6cb4733 252 SMART SM00448 24 134 1.3E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25170 841943a813f69b060f266385e29a01b3 191 SUPERFAMILY SSF46689 2 65 2.82E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25170 841943a813f69b060f266385e29a01b3 191 Gene3D G3DSA:1.10.10.60 1 66 4.4E-21 T 11-10-2018 AL538_25170 841943a813f69b060f266385e29a01b3 191 SUPERFAMILY SSF48498 83 174 1.97E-13 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_25170 841943a813f69b060f266385e29a01b3 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_25170 841943a813f69b060f266385e29a01b3 191 Gene3D G3DSA:1.10.357.10 72 189 3.7E-14 T 11-10-2018 AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 34 388 3.4E-135 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 Pfam PF00155 Aminotransferase class I and II 54 384 6.8E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 Gene3D G3DSA:3.90.1150.10 54 384 2.2E-120 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 16 392 46.209 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 SUPERFAMILY SSF53383 16 391 2.63E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_15700 069fd83d8d8b26ca266aae91c03478e2 395 Gene3D G3DSA:3.40.640.10 70 295 2.2E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_11480 ee98f29531e7b7d9c6db8d224d506988 216 Gene3D G3DSA:3.90.79.10 1 208 5.5E-63 T 11-10-2018 AL538_11480 ee98f29531e7b7d9c6db8d224d506988 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_11480 ee98f29531e7b7d9c6db8d224d506988 216 SUPERFAMILY SSF55811 9 204 4.47E-45 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_11480 ee98f29531e7b7d9c6db8d224d506988 216 Pfam PF00293 NUDIX domain 58 175 6.2E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_11480 ee98f29531e7b7d9c6db8d224d506988 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 198 1.3E-64 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 SUPERFAMILY SSF46689 197 247 2.28E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 SMART SM00342 213 296 6.6E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 SUPERFAMILY SSF46689 250 298 9.41E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 5.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 5.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 Gene3D G3DSA:1.10.10.60 189 246 4.8E-13 T 11-10-2018 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 Gene3D G3DSA:1.10.10.60 247 300 7.0E-19 T 11-10-2018 AL538_17950 88cd1704d2554e8795e63391c35eed82 301 Pfam PF12833 Helix-turn-helix domain 219 297 1.6E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 SMART SM01274 28 161 2.2E-74 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 SUPERFAMILY SSF53223 20 171 3.88E-52 T 11-10-2018 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 Gene3D G3DSA:3.40.50.720 171 425 2.7E-83 T 11-10-2018 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 Gene3D G3DSA:3.40.50.10380 6 170 2.3E-66 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 366 8.9E-26 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 PIRSF PIRSF000106 120 425 1.8E-62 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 PIRSF PIRSF000106 47 128 2.7E-10 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 SUPERFAMILY SSF51735 173 420 1.53E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 Pfam PF00390 Malic enzyme, N-terminal domain 30 124 2.5E-20 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL538_07870 55c647bdfadd92c3c5271c048d619cd5 425 SMART SM00919 173 409 3.8E-141 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 SUPERFAMILY SSF51735 2 150 1.03E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.0E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.565 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.1E-44 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 SUPERFAMILY SSF55347 126 274 1.08E-62 T 11-10-2018 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 394 1.6E-159 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Gene3D G3DSA:3.40.50.720 1 150 2.5E-51 T 11-10-2018 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Gene3D G3DSA:1.10.1740.10 312 400 4.7E-28 T 11-10-2018 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 SUPERFAMILY SSF69055 302 398 4.97E-30 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.9E-39 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_05445 8bbf0e37e05c5ecc79c5a6b21c23fc56 401 PIRSF PIRSF006205 1 401 2.4E-151 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 299 306 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 PRINTS PR00107 Phosphocarrier protein signature 342 359 9.7E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 PRINTS PR00107 Phosphocarrier protein signature 327 342 9.7E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 PRINTS PR00107 Phosphocarrier protein signature 299 315 9.7E-18 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Gene3D G3DSA:3.30.1340.10 288 375 6.1E-27 T 11-10-2018 IPR035895 HPr-like superfamily AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Gene3D G3DSA:3.40.930.10 1 142 2.9E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Gene3D G3DSA:3.40.930.10 143 275 1.5E-6 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 SUPERFAMILY SSF55804 4 140 4.06E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 SUPERFAMILY SSF55804 145 276 1.1E-18 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Pfam PF00381 PTS HPr component phosphorylation site 291 370 3.8E-26 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 291 370 4.1E-23 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 SUPERFAMILY SSF55594 291 376 3.01E-23 T 11-10-2018 IPR035895 HPr-like superfamily AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 328 343 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 205 274 1.7E-4 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_23935 80cd32f37a1c2332a992b861fa83f259 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 2.1E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_19010 6a95c334d705aa7ad5a3a25075094bd3 88 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.6E-45 T 11-10-2018 IPR021376 Protein of unknown function DUF2999 AL538_22665 b167c53db0765434d5b6cab1fd60502b 151 PIRSF PIRSF006105 1 151 7.4E-47 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL538_22665 b167c53db0765434d5b6cab1fd60502b 151 Gene3D G3DSA:1.10.1130.10 65 132 8.1E-29 T 11-10-2018 AL538_22665 b167c53db0765434d5b6cab1fd60502b 151 SUPERFAMILY SSF48695 35 148 7.94E-41 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_22665 b167c53db0765434d5b6cab1fd60502b 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 1.4E-47 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL538_10625 9ad4fe8844ec9d53a05e03d5545cf069 351 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 344 3.2E-149 T 11-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AL538_10625 9ad4fe8844ec9d53a05e03d5545cf069 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 325 2.2E-69 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 AL538_10625 9ad4fe8844ec9d53a05e03d5545cf069 351 Gene3D G3DSA:3.40.50.2000 164 346 5.3E-60 T 11-10-2018 AL538_10625 9ad4fe8844ec9d53a05e03d5545cf069 351 SUPERFAMILY SSF53756 1 343 2.2E-97 T 11-10-2018 AL538_10625 9ad4fe8844ec9d53a05e03d5545cf069 351 Gene3D G3DSA:3.40.50.2000 1 148 1.5E-52 T 11-10-2018 AL538_12220 5de36163361d32405de1973ab6a2ed84 734 SUPERFAMILY SSF161098 412 518 5.01E-7 T 11-10-2018 IPR035906 MetI-like superfamily AL538_12220 5de36163361d32405de1973ab6a2ed84 734 Gene3D G3DSA:1.10.3720.10 496 731 8.1E-23 T 11-10-2018 IPR035906 MetI-like superfamily AL538_12220 5de36163361d32405de1973ab6a2ed84 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.7E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_12220 5de36163361d32405de1973ab6a2ed84 734 SUPERFAMILY SSF161098 502 720 6.02E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_03975 dafee4f38814f03443b31546749004cf 686 Gene3D G3DSA:2.40.50.140 575 686 2.8E-34 T 11-10-2018 AL538_03975 dafee4f38814f03443b31546749004cf 686 Gene3D G3DSA:1.10.730.10 389 526 3.6E-34 T 11-10-2018 AL538_03975 dafee4f38814f03443b31546749004cf 686 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 554 685 1.3E-46 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.624 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_03975 dafee4f38814f03443b31546749004cf 686 Pfam PF01588 Putative tRNA binding domain 591 683 6.4E-26 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AL538_03975 dafee4f38814f03443b31546749004cf 686 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03975 dafee4f38814f03443b31546749004cf 686 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 7.6E-201 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 8.5E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AL538_03975 dafee4f38814f03443b31546749004cf 686 SUPERFAMILY SSF47323 389 547 8.94E-45 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03975 dafee4f38814f03443b31546749004cf 686 SUPERFAMILY SSF52374 4 387 1.61E-101 T 11-10-2018 AL538_03975 dafee4f38814f03443b31546749004cf 686 SUPERFAMILY SSF50249 585 685 4.65E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_03975 dafee4f38814f03443b31546749004cf 686 SUPERFAMILY SSF57770 142 176 4.19E-13 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_03975 dafee4f38814f03443b31546749004cf 686 Gene3D G3DSA:2.20.28.20 142 176 2.8E-161 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_03975 dafee4f38814f03443b31546749004cf 686 Pfam PF09334 tRNA synthetases class I (M) 9 396 3.2E-165 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_03975 dafee4f38814f03443b31546749004cf 686 Gene3D G3DSA:3.40.50.620 9 384 2.8E-161 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 Gene3D G3DSA:3.30.70.1450 289 360 6.8E-12 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 Gene3D G3DSA:3.30.70.1450 206 279 9.2E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 Pfam PF02080 TrkA-C domain 293 349 9.0E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 Pfam PF02080 TrkA-C domain 209 276 8.8E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 Pfam PF03600 Citrate transporter 30 518 2.3E-30 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 SUPERFAMILY SSF116726 206 282 8.11E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_11015 01743b81fbe670317f4a7daebc3ecd7c 574 SUPERFAMILY SSF116726 290 349 1.7E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 SUPERFAMILY SSF51445 148 655 1.31E-92 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 Gene3D G3DSA:3.20.20.80 191 416 1.7E-55 T 11-10-2018 AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 PIRSF PIRSF036917 1 685 0.0 T 11-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 Gene3D G3DSA:3.20.20.80 430 653 2.7E-37 T 11-10-2018 AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 4.5E-51 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_18315 ca114e33350f2d86eeb8e36ed0ceb71d 686 SMART SM00642 203 646 8.6E-93 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 SUPERFAMILY SSF52540 197 372 1.08E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Gene3D G3DSA:3.40.50.11060 18 138 4.8E-37 T 11-10-2018 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 PIRSF PIRSF006809 3 423 1.1E-151 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.1E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 5.7E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.295 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.4E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.2E-156 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 SUPERFAMILY SSF54980 364 427 1.29E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AL538_08090 e14531708ba24c47ecd9ac62b6320485 429 Gene3D G3DSA:3.40.50.300 197 371 3.6E-43 T 11-10-2018 AL538_01180 521cf280400f3494b489dd132fb5c825 312 Pfam PF00582 Universal stress protein family 151 301 1.1E-12 T 11-10-2018 IPR006016 UspA AL538_01180 521cf280400f3494b489dd132fb5c825 312 Gene3D G3DSA:3.40.50.12370 1 312 2.8E-81 T 11-10-2018 AL538_01180 521cf280400f3494b489dd132fb5c825 312 SUPERFAMILY SSF52402 152 309 1.34E-19 T 11-10-2018 AL538_01180 521cf280400f3494b489dd132fb5c825 312 SUPERFAMILY SSF52402 1 142 1.67E-10 T 11-10-2018 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 5.7E-36 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 PIRSF PIRSF004682 1 183 5.0E-64 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 SUPERFAMILY SSF56784 4 181 1.79E-49 T 11-10-2018 IPR036412 HAD-like superfamily AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.7E-13 T 11-10-2018 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 7.4E-39 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 6.1E-82 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AL538_13000 14bcba8b036f74ab7b80f3387700d6e2 183 Gene3D G3DSA:3.40.50.1000 2 183 4.1E-62 T 11-10-2018 IPR023214 HAD superfamily AL538_20440 ce3c8ce7131107e759296fdf97ee7f72 168 SUPERFAMILY SSF141523 32 166 1.7E-24 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL538_20440 ce3c8ce7131107e759296fdf97ee7f72 168 Pfam PF03734 L,D-transpeptidase catalytic domain 32 166 2.3E-19 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL538_20440 ce3c8ce7131107e759296fdf97ee7f72 168 Gene3D G3DSA:2.40.440.10 21 168 2.1E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL538_24940 21563369752f1ee05c43a9326be67fa7 390 SUPERFAMILY SSF49879 28 111 1.11E-21 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AL538_24940 21563369752f1ee05c43a9326be67fa7 390 SMART SM00240 31 82 4.7E-8 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL538_24940 21563369752f1ee05c43a9326be67fa7 390 Gene3D G3DSA:2.60.200.20 4 117 2.6E-20 T 11-10-2018 AL538_24940 21563369752f1ee05c43a9326be67fa7 390 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 140 387 5.8E-66 T 11-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AL538_24940 21563369752f1ee05c43a9326be67fa7 390 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 112 1.2E-39 T 11-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AL538_24940 21563369752f1ee05c43a9326be67fa7 390 Pfam PF00498 FHA domain 32 101 8.7E-16 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL538_19360 a81fc96968c4e29c7704cf6f03ede8d2 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 26.156 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_19360 a81fc96968c4e29c7704cf6f03ede8d2 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 1.7E-116 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_19360 a81fc96968c4e29c7704cf6f03ede8d2 360 Pfam PF01098 Cell cycle protein 14 355 1.0E-98 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 SUPERFAMILY SSF55874 342 461 1.57E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 SUPERFAMILY SSF47384 262 324 6.08E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 Gene3D G3DSA:1.10.287.130 258 326 8.0E-6 T 11-10-2018 AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 Pfam PF11884 Domain of unknown function (DUF3404) 16 267 1.5E-67 T 11-10-2018 IPR021821 Protein of unknown function DUF3404 AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 Gene3D G3DSA:3.30.565.10 337 467 2.5E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25375 f5cb117238670bc878e7ec07c3b3c111 468 SMART SM00387 367 464 1.4E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 Gene3D G3DSA:3.30.1510.10 131 266 8.0E-186 T 11-10-2018 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 584 42.771 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 SUPERFAMILY SSF52540 4 582 8.85E-215 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 Gene3D G3DSA:3.10.410.10 471 560 2.7E-30 T 11-10-2018 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 Gene3D G3DSA:3.40.50.300 4 456 8.0E-186 T 11-10-2018 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 Pfam PF01268 Formate--tetrahydrofolate ligase 3 583 2.2E-239 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 347 358 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL538_24005 be4d9f7dc7791ffcc9bf4a20a7c2433a 584 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 105 115 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AL538_19770 f5a348a79dc48f9737bf9a9618a51145 470 Gene3D G3DSA:1.10.2020.10 46 137 1.2E-201 T 11-10-2018 AL538_19770 f5a348a79dc48f9737bf9a9618a51145 470 Pfam PF02614 Glucuronate isomerase 1 466 1.6E-229 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL538_19770 f5a348a79dc48f9737bf9a9618a51145 470 SUPERFAMILY SSF51556 2 466 1.36E-182 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_19770 f5a348a79dc48f9737bf9a9618a51145 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.156 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AL538_19770 f5a348a79dc48f9737bf9a9618a51145 470 Gene3D G3DSA:3.20.20.140 7 466 1.2E-201 T 11-10-2018 AL538_14315 8cf242a49e88f7938b93049a7295e5d2 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 33.687 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL538_14315 8cf242a49e88f7938b93049a7295e5d2 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 5.8E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_14315 8cf242a49e88f7938b93049a7295e5d2 264 SUPERFAMILY SSF53474 16 261 5.05E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14315 8cf242a49e88f7938b93049a7295e5d2 264 Gene3D G3DSA:3.40.50.1820 10 260 3.4E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14315 8cf242a49e88f7938b93049a7295e5d2 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 259 9.9E-82 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 Gene3D G3DSA:3.40.50.720 14 312 3.1E-110 T 11-10-2018 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.3E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 SUPERFAMILY SSF52283 7 136 5.29E-49 T 11-10-2018 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 Gene3D G3DSA:3.30.70.260 328 408 2.6E-32 T 11-10-2018 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 SUPERFAMILY SSF51735 108 295 1.74E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 Gene3D G3DSA:3.40.50.720 109 297 3.1E-110 T 11-10-2018 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 SUPERFAMILY SSF55021 334 408 1.37E-16 T 11-10-2018 AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL538_06895 558586e4e22d6554b69eb25ca9d10e93 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.0E-38 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 Pfam PF00293 NUDIX domain 22 132 5.2E-24 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 PRINTS PR00502 NUDIX hydrolase family signature 45 59 1.2E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 PRINTS PR00502 NUDIX hydrolase family signature 59 74 1.2E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 Gene3D G3DSA:3.90.79.10 2 147 9.4E-43 T 11-10-2018 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 SUPERFAMILY SSF55811 18 139 4.47E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_17930 745b3fe76f5c9efb4980349c5a35797b 154 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_11150 312b8f5eeec342d7862caaaf3c666a21 333 SUPERFAMILY SSF48576 12 332 6.12E-99 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL538_11150 312b8f5eeec342d7862caaaf3c666a21 333 Pfam PF00348 Polyprenyl synthetase 42 278 2.6E-73 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AL538_11150 312b8f5eeec342d7862caaaf3c666a21 333 Gene3D G3DSA:1.10.600.10 4 333 1.6E-119 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AL538_11150 312b8f5eeec342d7862caaaf3c666a21 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL538_11150 312b8f5eeec342d7862caaaf3c666a21 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AL538_02275 589224dd1224a1c48aff1e17e2b93f94 100 Gene3D G3DSA:3.30.2310.20 1 96 8.4E-20 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL538_02275 589224dd1224a1c48aff1e17e2b93f94 100 SUPERFAMILY SSF143011 1 90 9.42E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily AL538_02275 589224dd1224a1c48aff1e17e2b93f94 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 1.1E-7 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL538_02275 589224dd1224a1c48aff1e17e2b93f94 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 4.2E-18 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL538_13890 657b98a4de116f9bd717cc08319a55e6 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 4.0E-34 T 11-10-2018 IPR027354 YcgL domain AL538_13890 657b98a4de116f9bd717cc08319a55e6 93 SUPERFAMILY SSF160191 1 91 4.18E-36 T 11-10-2018 IPR038068 YcgL-like superfamily AL538_13890 657b98a4de116f9bd717cc08319a55e6 93 Pfam PF05166 YcgL domain 3 74 1.9E-30 T 11-10-2018 IPR027354 YcgL domain AL538_13890 657b98a4de116f9bd717cc08319a55e6 93 Gene3D G3DSA:3.10.510.20 1 73 2.4E-28 T 11-10-2018 IPR038068 YcgL-like superfamily AL538_13890 657b98a4de116f9bd717cc08319a55e6 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 26.626 T 11-10-2018 IPR027354 YcgL domain AL538_01385 8b100b14ea48d50e1055e41ed167824f 474 SUPERFAMILY SSF55021 398 463 2.37E-9 T 11-10-2018 AL538_01385 8b100b14ea48d50e1055e41ed167824f 474 Gene3D G3DSA:3.40.1160.10 2 308 3.3E-56 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_01385 8b100b14ea48d50e1055e41ed167824f 474 Pfam PF00696 Amino acid kinase family 3 293 5.1E-22 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_01385 8b100b14ea48d50e1055e41ed167824f 474 Gene3D G3DSA:3.30.2130.10 311 465 1.4E-10 T 11-10-2018 AL538_01385 8b100b14ea48d50e1055e41ed167824f 474 SUPERFAMILY SSF53633 5 307 4.64E-54 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_21820 4517e27959f7199000f0fe6db649a161 149 Pfam PF04945 YHS domain 43 87 1.2E-8 T 11-10-2018 IPR007029 YHS domain AL538_23685 c98e6f4421f9be7e27e2332255b5f2e3 374 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 2.6E-106 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AL538_23685 c98e6f4421f9be7e27e2332255b5f2e3 374 SUPERFAMILY SSF52096 18 344 7.58E-53 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_23685 c98e6f4421f9be7e27e2332255b5f2e3 374 Gene3D G3DSA:3.90.226.10 5 374 1.4E-115 T 11-10-2018 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 5.8E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 Gene3D G3DSA:3.40.50.2300 11 147 6.8E-29 T 11-10-2018 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 Gene3D G3DSA:1.10.10.10 152 218 7.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 SMART SM00421 157 214 6.1E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 SUPERFAMILY SSF46894 149 216 3.3E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 2.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 2.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_17215 947a21a9ddbadb00d7acf53349b98376 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 2.1E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 SUPERFAMILY SSF53335 6 308 1.26E-62 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 432 473 4.0E-10 T 11-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 2.7E-29 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 66.55 T 11-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Gene3D G3DSA:2.30.130.90 309 478 2.2E-67 T 11-10-2018 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 5.8E-49 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 Gene3D G3DSA:3.40.50.150 2 308 5.1E-99 T 11-10-2018 AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.3E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AL538_00915 524d882c899262b2172eb5ba30ca4bd5 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 9.6E-102 T 11-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 SMART SM00382 278 472 4.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25740 eff216453febf0c6194f0a2e59f33382 501 SMART SM00382 30 219 1.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_25740 eff216453febf0c6194f0a2e59f33382 501 SUPERFAMILY SSF52540 269 480 5.21E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25740 eff216453febf0c6194f0a2e59f33382 501 Pfam PF00005 ABC transporter 21 170 1.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 SUPERFAMILY SSF52540 5 228 2.5E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25740 eff216453febf0c6194f0a2e59f33382 501 Gene3D G3DSA:3.40.50.300 267 495 2.5E-46 T 11-10-2018 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 Gene3D G3DSA:3.40.50.300 1 240 4.5E-58 T 11-10-2018 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 Pfam PF00005 ABC transporter 270 423 8.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_25740 eff216453febf0c6194f0a2e59f33382 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_17295 e429afdf896ac2121cda61ad00e83467 191 Pfam PF07603 Protein of unknown function (DUF1566) 42 176 9.1E-21 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 4.9E-70 T 11-10-2018 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.684 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 2.2E-81 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 Gene3D G3DSA:3.40.50.150 2 206 3.1E-74 T 11-10-2018 AL538_06715 4882fae668b590bf73ba39a3de6f0822 208 SUPERFAMILY SSF53335 14 204 2.92E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_26285 180ac133ac827e530287647c34f76fda 606 Pfam PF00563 EAL domain 351 588 1.8E-61 T 11-10-2018 IPR001633 EAL domain AL538_26285 180ac133ac827e530287647c34f76fda 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 1.7E-26 T 11-10-2018 IPR000160 GGDEF domain AL538_26285 180ac133ac827e530287647c34f76fda 606 SMART SM00052 345 593 3.5E-75 T 11-10-2018 IPR001633 EAL domain AL538_26285 180ac133ac827e530287647c34f76fda 606 Gene3D G3DSA:3.30.70.270 171 342 8.9E-36 T 11-10-2018 AL538_26285 180ac133ac827e530287647c34f76fda 606 SUPERFAMILY SSF141868 359 600 1.44E-70 T 11-10-2018 IPR035919 EAL domain superfamily AL538_26285 180ac133ac827e530287647c34f76fda 606 SUPERFAMILY SSF55073 182 332 2.43E-31 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_26285 180ac133ac827e530287647c34f76fda 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 4.5E-28 T 11-10-2018 IPR000160 GGDEF domain AL538_26285 180ac133ac827e530287647c34f76fda 606 SUPERFAMILY SSF55781 30 139 5.89E-7 T 11-10-2018 AL538_26285 180ac133ac827e530287647c34f76fda 606 Gene3D G3DSA:3.20.20.450 343 606 3.1E-75 T 11-10-2018 IPR035919 EAL domain superfamily AL538_26285 180ac133ac827e530287647c34f76fda 606 SMART SM00267 166 330 1.7E-27 T 11-10-2018 IPR000160 GGDEF domain AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.70.1440 658 858 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.70.1430 41 807 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82714 184 263 2.09E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.4E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:1.20.1640.10 512 1024 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.2090.10 179 270 1.3E-258 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82693 141 325 3.24E-13 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:1.20.1640.10 13 511 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82714 712 794 6.67E-5 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.70.1320 135 325 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82866 293 490 4.32E-40 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82693 41 133 1.23E-22 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 SUPERFAMILY SSF82866 794 1029 1.19E-47 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.70.1430 567 657 1.3E-258 T 11-10-2018 AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Gene3D G3DSA:3.30.2090.10 711 799 1.3E-258 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_06260 e02a6a8067359bb69aafdf209028649e 1042 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 2.5E-174 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 SUPERFAMILY SSF56300 7 320 2.68E-73 T 11-10-2018 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 SUPERFAMILY SSF55816 369 564 2.62E-36 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 252 3.6E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 PRINTS PR01607 Apyrase family signature 275 295 3.8E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 PRINTS PR01607 Apyrase family signature 10 28 3.8E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 PRINTS PR01607 Apyrase family signature 216 233 3.8E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 PRINTS PR01607 Apyrase family signature 235 258 3.8E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 Gene3D G3DSA:3.60.21.10 2 369 7.8E-88 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 Gene3D G3DSA:3.90.780.10 370 578 2.3E-32 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_24095 82bc93d46a0cb70994dfced4f1e9a795 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 539 4.5E-21 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AL538_08805 82a8628ff089497520f96b140a39fae6 151 SUPERFAMILY SSF54928 50 142 3.63E-27 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AL538_08805 82a8628ff089497520f96b140a39fae6 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 1.2E-17 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL538_08805 82a8628ff089497520f96b140a39fae6 151 SMART SM00360 63 135 1.4E-20 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL538_08805 82a8628ff089497520f96b140a39fae6 151 Gene3D G3DSA:3.30.70.330 44 150 2.0E-26 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 Gene3D G3DSA:3.40.50.720 4 327 6.2E-127 T 11-10-2018 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 Gene3D G3DSA:3.30.360.10 151 315 6.2E-127 T 11-10-2018 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PIRSF PIRSF000149 1 332 4.5E-115 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 SMART SM00846 3 152 8.2E-70 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.0E-60 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.9E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 3.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.4E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 SUPERFAMILY SSF51735 1 173 5.86E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 SUPERFAMILY SSF55347 152 314 3.87E-64 T 11-10-2018 AL538_09055 4e28f4c034002e24e9b4837a3fdb9469 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.3E-119 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 SMART SM01060 6 390 1.4E-289 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 19 42 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 82 100 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 287 314 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 103 120 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 319 345 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PRINTS PR00067 Catalase signature 122 140 1.1E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 Gene3D G3DSA:2.40.180.10 1 478 7.2E-232 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 SUPERFAMILY SSF56634 4 477 2.62E-216 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 PIRSF PIRSF038928 1 478 5.1E-223 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 Pfam PF06628 Catalase-related immune-responsive 415 473 1.4E-21 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_22045 dcbf7c746b664b5ffb9acd2cca9b55c6 478 Pfam PF00199 Catalase 6 386 1.8E-191 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 AL538_13730 ab6f26d43432ca2a4a1c53290d00aabb 252 Gene3D G3DSA:3.40.1390.30 14 237 3.3E-82 T 11-10-2018 AL538_13730 ab6f26d43432ca2a4a1c53290d00aabb 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 2.6E-71 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL538_13730 ab6f26d43432ca2a4a1c53290d00aabb 252 SUPERFAMILY SSF102705 1 251 3.14E-83 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AL538_13730 ab6f26d43432ca2a4a1c53290d00aabb 252 Gene3D G3DSA:3.40.1390.30 97 223 3.3E-82 T 11-10-2018 AL538_13730 ab6f26d43432ca2a4a1c53290d00aabb 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 2.3E-59 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL538_17280 5af8e6d463c3a4d5db6d48bbad85ba52 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 9.7E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17280 5af8e6d463c3a4d5db6d48bbad85ba52 310 Gene3D G3DSA:1.10.3720.10 85 309 3.2E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17280 5af8e6d463c3a4d5db6d48bbad85ba52 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 1.3E-91 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AL538_17280 5af8e6d463c3a4d5db6d48bbad85ba52 310 SUPERFAMILY SSF161098 34 305 7.85E-36 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20110 aaf039441c67e92195276ac8224412da 394 SUPERFAMILY SSF103473 3 381 2.75E-54 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_20110 aaf039441c67e92195276ac8224412da 394 Gene3D G3DSA:1.20.1720.10 9 384 1.6E-81 T 11-10-2018 AL538_20110 aaf039441c67e92195276ac8224412da 394 Pfam PF07690 Major Facilitator Superfamily 15 295 3.0E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_19310 34a01d107bfb6c0ca2ce9a9e3acf47d4 340 SMART SM00387 242 340 8.6E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19310 34a01d107bfb6c0ca2ce9a9e3acf47d4 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 339 2.8E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_19310 34a01d107bfb6c0ca2ce9a9e3acf47d4 340 SUPERFAMILY SSF55874 213 337 4.45E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19310 34a01d107bfb6c0ca2ce9a9e3acf47d4 340 Pfam PF06580 Histidine kinase 149 227 8.5E-23 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL538_19310 34a01d107bfb6c0ca2ce9a9e3acf47d4 340 Gene3D G3DSA:3.30.565.10 205 340 5.5E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_19595 60d26fe391aa3a4eacc5e458ba446dee 79 Gene3D G3DSA:3.30.70.330 1 79 3.7E-22 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AL538_19595 60d26fe391aa3a4eacc5e458ba446dee 79 SUPERFAMILY SSF54928 2 78 3.49E-22 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 AL538_19595 60d26fe391aa3a4eacc5e458ba446dee 79 SMART SM00360 2 75 8.6E-20 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL538_19595 60d26fe391aa3a4eacc5e458ba446dee 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 1.9E-17 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 Gene3D G3DSA:1.10.8.540 509 596 2.1E-23 T 11-10-2018 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PIRSF PIRSF005419 9 699 2.8E-253 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-10-2018 IPR025505 FHIPEP conserved site AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 Pfam PF00771 FHIPEP family 32 689 5.5E-270 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 3.3E-267 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 Gene3D G3DSA:3.40.30.60 365 508 6.4E-54 T 11-10-2018 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 Gene3D G3DSA:1.10.490.80 600 697 4.8E-15 T 11-10-2018 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_05040 8c9ccbf00f8a0c9649d5366cac726a84 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.522 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 5.8E-76 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 PRINTS PR00990 Ribokinase signature 33 52 2.1E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 PRINTS PR00990 Ribokinase signature 173 188 2.1E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 PRINTS PR00990 Ribokinase signature 217 228 2.1E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 PRINTS PR00990 Ribokinase signature 6 27 2.1E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 PRINTS PR00990 Ribokinase signature 105 118 2.1E-35 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 Gene3D G3DSA:3.40.1190.20 1 301 9.6E-107 T 11-10-2018 IPR029056 Ribokinase-like AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 SUPERFAMILY SSF53613 1 302 9.35E-87 T 11-10-2018 IPR029056 Ribokinase-like AL538_25725 aa188457a5bc0a9b7dfd9f6644817cf8 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 7.7E-113 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Gene3D G3DSA:3.60.20.10 2 241 9.0E-82 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 SUPERFAMILY SSF53697 245 610 1.21E-112 T 11-10-2018 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Gene3D G3DSA:3.40.50.10490 249 609 2.1E-144 T 11-10-2018 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 5.4E-258 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 2.0E-21 T 11-10-2018 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.231 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 SUPERFAMILY SSF56235 2 234 6.26E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_11300 7bdd018cbc37310467e1ad9b30845825 610 Gene3D G3DSA:3.40.50.10490 448 595 2.1E-144 T 11-10-2018 AL538_24915 9b1881cc11743f4f9d1c0572e17f80a5 231 Gene3D G3DSA:3.40.1730.10 9 230 1.4E-59 T 11-10-2018 IPR038225 T6S-associated protein TagF superfamily AL538_24915 9b1881cc11743f4f9d1c0572e17f80a5 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 139 1.9E-37 T 11-10-2018 IPR017748 T6S-associated protein TagF AL538_24915 9b1881cc11743f4f9d1c0572e17f80a5 231 PIRSF PIRSF029287 2 230 5.3E-31 T 11-10-2018 IPR017748 T6S-associated protein TagF AL538_24915 9b1881cc11743f4f9d1c0572e17f80a5 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 4.9E-41 T 11-10-2018 IPR017748 T6S-associated protein TagF AL538_04715 595e13071d42a55c5a8feacc695f84ba 94 SUPERFAMILY SSF54909 1 93 2.35E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_04715 595e13071d42a55c5a8feacc695f84ba 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 1.8E-15 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL538_04715 595e13071d42a55c5a8feacc695f84ba 94 Gene3D G3DSA:3.30.70.100 1 94 1.1E-29 T 11-10-2018 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 Gene3D G3DSA:3.40.50.2300 111 222 4.4E-41 T 11-10-2018 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 Pfam PF02378 Phosphotransferase system, EIIC 247 510 2.4E-17 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 Gene3D G3DSA:3.40.50.2300 1 103 4.3E-25 T 11-10-2018 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 231 566 1.6E-142 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 SUPERFAMILY SSF52794 121 222 2.79E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.6E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 211 3.4E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.5E-36 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_23925 977bd030738e18cdd2ac32c705bb2004 577 SUPERFAMILY SSF52794 2 101 6.1E-29 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 PIRSF PIRSF003128 1 554 5.0E-162 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 3.5E-173 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.1E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 Gene3D G3DSA:3.40.50.300 247 553 3.1E-52 T 11-10-2018 AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 SUPERFAMILY SSF52540 1 513 1.86E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12705 42dd440e17abc756cb95ddbc5efd5f51 554 Gene3D G3DSA:3.40.50.300 1 227 1.1E-42 T 11-10-2018 AL538_08080 91ce0b8274f6746681a9691484ff3e71 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.6E-28 T 11-10-2018 IPR001107 Band 7 domain AL538_08080 91ce0b8274f6746681a9691484ff3e71 326 SUPERFAMILY SSF117892 56 223 6.02E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL538_08080 91ce0b8274f6746681a9691484ff3e71 326 SMART SM00244 18 218 2.5E-48 T 11-10-2018 IPR001107 Band 7 domain AL538_08080 91ce0b8274f6746681a9691484ff3e71 326 PIRSF PIRSF005651 1 326 1.4E-95 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AL538_08080 91ce0b8274f6746681a9691484ff3e71 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.9E-136 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AL538_12170 67805a6379edaac3a73d53427f0e0cbf 280 Gene3D G3DSA:3.30.1380.10 20 280 8.5E-98 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_12170 67805a6379edaac3a73d53427f0e0cbf 280 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 277 3.7E-94 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL538_12170 67805a6379edaac3a73d53427f0e0cbf 280 PIRSF PIRSF018455 1 280 1.9E-110 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 AL538_12170 67805a6379edaac3a73d53427f0e0cbf 280 SUPERFAMILY SSF55166 21 278 6.28E-94 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 8.6E-32 T 11-10-2018 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 Gene3D G3DSA:1.10.3860.10 4 456 5.8E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 4.8E-99 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_01970 e481f873cf8f33746e7b4683d53c444b 457 SUPERFAMILY SSF118215 29 441 4.32E-91 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_13030 28648efa4a4da009e4c0db027f18cecb 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 2.7E-34 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT AL538_17650 7e97e71948f4aa89d6d622f7df03379b 267 SUPERFAMILY SSF53474 32 263 7.41E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17650 7e97e71948f4aa89d6d622f7df03379b 267 Gene3D G3DSA:3.40.50.1820 31 267 6.1E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17650 7e97e71948f4aa89d6d622f7df03379b 267 Pfam PF00756 Putative esterase 46 154 1.4E-12 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL538_00035 140bad29dbcbacfbf9e6db17f18ad84e 106 SUPERFAMILY SSF52091 6 101 3.53E-20 T 11-10-2018 IPR036513 STAS domain superfamily AL538_00035 140bad29dbcbacfbf9e6db17f18ad84e 106 Pfam PF01740 STAS domain 7 97 1.4E-9 T 11-10-2018 IPR002645 STAS domain AL538_00035 140bad29dbcbacfbf9e6db17f18ad84e 106 Gene3D G3DSA:3.30.750.24 1 105 6.9E-18 T 11-10-2018 IPR036513 STAS domain superfamily AL538_00035 140bad29dbcbacfbf9e6db17f18ad84e 106 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 7 102 2.4E-15 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 Pfam PF00072 Response regulator receiver domain 4 112 4.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 SUPERFAMILY SSF46894 125 222 2.78E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 5.0E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 SUPERFAMILY SSF52172 1 124 1.32E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 SMART SM00862 147 221 1.6E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 SMART SM00448 2 113 9.1E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 Gene3D G3DSA:1.10.10.10 128 224 5.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03510 c59d9b9bd39380683a65d3f52189b882 225 Gene3D G3DSA:3.40.50.2300 1 122 2.1E-35 T 11-10-2018 AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 Gene3D G3DSA:1.25.40.10 15 163 4.3E-53 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 106 128 5.3E-34 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 50 69 5.3E-34 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 74 96 5.3E-34 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 25 48 5.3E-34 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 PIRSF PIRSF003165 1 163 1.3E-58 T 11-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 SUPERFAMILY SSF48452 28 139 1.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 Pfam PF07720 Tetratricopeptide repeat 40 71 4.2E-6 T 11-10-2018 IPR011716 Tetratricopeptide TPR-3 AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 Pfam PF07720 Tetratricopeptide repeat 78 99 0.11 T 11-10-2018 IPR011716 Tetratricopeptide TPR-3 AL538_15290 8d2c110ea0fce77761c3c1fa15186c63 163 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 22 156 8.0E-45 T 11-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Gene3D G3DSA:1.10.390.20 538 664 2.8E-6 T 11-10-2018 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 689 759 6.0E-6 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Pfam PF01752 Collagenase 363 647 2.8E-110 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Gene3D G3DSA:1.10.1740.190 394 537 3.3E-30 T 11-10-2018 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Gene3D G3DSA:2.60.120.380 673 771 4.1E-8 T 11-10-2018 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 Pfam PF08453 Peptidase family M9 N-terminal 118 301 5.2E-45 T 11-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 481 497 8.6E-22 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 463 477 8.6E-22 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 523 541 8.6E-22 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_01170 1de578732e458fe575b5e3bdc9316c52 773 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 547 562 8.6E-22 T 11-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 AL538_10415 d9080dde430480ace9486d9007a304dd 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 1.9E-20 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 Pfam PF00582 Universal stress protein family 1 142 1.7E-32 T 11-10-2018 IPR006016 UspA AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 SUPERFAMILY SSF52402 2 143 4.35E-35 T 11-10-2018 AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 Gene3D G3DSA:3.40.50.620 1 142 4.7E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 PIRSF PIRSF006276 1 145 4.3E-19 T 11-10-2018 IPR006015 Universal stress protein A AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 PRINTS PR01438 Universal stress protein signature 102 114 1.5E-11 T 11-10-2018 IPR006015 Universal stress protein A AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-11 T 11-10-2018 IPR006015 Universal stress protein A AL538_11120 4620aaac9d9854b4e057aeabc29db523 145 PRINTS PR01438 Universal stress protein signature 120 142 1.5E-11 T 11-10-2018 IPR006015 Universal stress protein A AL538_04055 dae3fdb0147a00192095225a47ed9948 424 Pfam PF02308 MgtC family 16 141 1.0E-17 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_04055 dae3fdb0147a00192095225a47ed9948 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 2.6E-65 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 AL538_13405 711abe979199018c211159d128ab114c 143 Pfam PF02169 LPP20 lipoprotein 20 118 6.0E-9 T 11-10-2018 IPR024952 Lipoprotein LPP20-like AL538_13405 711abe979199018c211159d128ab114c 143 PIRSF PIRSF028687 1 143 9.8E-58 T 11-10-2018 IPR007293 Flagellar protein FlgP AL538_05455 73833bddbb0709c05827969f768f67fa 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 9.8E-94 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL538_05455 73833bddbb0709c05827969f768f67fa 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.2E-80 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL538_05455 73833bddbb0709c05827969f768f67fa 251 SUPERFAMILY SSF64005 9 234 4.32E-88 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AL538_05455 73833bddbb0709c05827969f768f67fa 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.779 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AL538_05455 73833bddbb0709c05827969f768f67fa 251 Gene3D G3DSA:3.40.1180.10 1 239 1.0E-93 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AL538_05455 73833bddbb0709c05827969f768f67fa 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AL538_21975 e10e1c33711ac7ba63a398c3d5a0ce74 285 SUPERFAMILY SSF56784 47 222 1.68E-9 T 11-10-2018 IPR036412 HAD-like superfamily AL538_21975 e10e1c33711ac7ba63a398c3d5a0ce74 285 Gene3D G3DSA:3.40.50.1000 46 242 4.5E-8 T 11-10-2018 IPR023214 HAD superfamily AL538_21975 e10e1c33711ac7ba63a398c3d5a0ce74 285 Pfam PF11019 Protein of unknown function (DUF2608) 27 272 7.8E-73 T 11-10-2018 IPR022565 Protein of unknown function DUF2608 AL538_21795 8875e9b80303c8175fe2fc8e72608910 495 SMART SM00052 227 474 2.7E-70 T 11-10-2018 IPR001633 EAL domain AL538_21795 8875e9b80303c8175fe2fc8e72608910 495 SUPERFAMILY SSF141868 235 479 2.35E-72 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21795 8875e9b80303c8175fe2fc8e72608910 495 Gene3D G3DSA:3.20.20.450 227 485 5.6E-74 T 11-10-2018 IPR035919 EAL domain superfamily AL538_21795 8875e9b80303c8175fe2fc8e72608910 495 Pfam PF00563 EAL domain 237 469 1.7E-64 T 11-10-2018 IPR001633 EAL domain AL538_15150 60dfe167e5c1de05300d21924ce8148c 210 Pfam PF09025 YopR, type III needle-polymerisation regulator 80 210 9.8E-44 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AL538_15150 60dfe167e5c1de05300d21924ce8148c 210 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 87 209 5.7E-39 T 11-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AL538_15150 60dfe167e5c1de05300d21924ce8148c 210 SUPERFAMILY SSF140591 90 191 3.34E-9 T 11-10-2018 AL538_15150 60dfe167e5c1de05300d21924ce8148c 210 Gene3D G3DSA:1.10.10.1000 88 195 1.3E-5 T 11-10-2018 AL538_22110 a27aa8da7a552782c7fd96f4a534288c 177 Gene3D G3DSA:3.10.560.10 20 165 3.2E-23 T 11-10-2018 AL538_22110 a27aa8da7a552782c7fd96f4a534288c 177 Gene3D G3DSA:3.30.1950.10 31 103 3.2E-23 T 11-10-2018 AL538_22110 a27aa8da7a552782c7fd96f4a534288c 177 SUPERFAMILY SSF142984 103 139 8.24E-5 T 11-10-2018 AL538_22110 a27aa8da7a552782c7fd96f4a534288c 177 Pfam PF10531 SLBB domain 105 154 2.3E-15 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_22110 a27aa8da7a552782c7fd96f4a534288c 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 1.2E-17 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL538_16380 4066098be840261e06bd3afddab618a1 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 86 396 7.3E-58 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_16380 4066098be840261e06bd3afddab618a1 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 272.495 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL538_16380 4066098be840261e06bd3afddab618a1 443 SUPERFAMILY SSF53686 96 431 2.19E-51 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_16380 4066098be840261e06bd3afddab618a1 443 Gene3D G3DSA:3.40.50.1100 24 438 5.4E-196 T 11-10-2018 AL538_16380 4066098be840261e06bd3afddab618a1 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AL538_16380 4066098be840261e06bd3afddab618a1 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 438 1.2E-224 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AL538_16380 4066098be840261e06bd3afddab618a1 443 Gene3D G3DSA:3.40.50.1100 116 238 5.4E-196 T 11-10-2018 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Gene3D G3DSA:3.40.50.300 552 769 1.8E-66 T 11-10-2018 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 28 73 2.8E-4 T 11-10-2018 IPR004176 Clp, N-terminal AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SMART SM01086 771 863 3.0E-4 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 765 1.7E-39 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SUPERFAMILY SSF52540 548 838 1.38E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SMART SM00382 215 361 4.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SMART SM00382 599 759 4.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Gene3D G3DSA:1.10.1780.10 1 159 1.4E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SUPERFAMILY SSF81923 12 125 5.1E-18 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Gene3D G3DSA:1.10.8.60 771 865 3.7E-11 T 11-10-2018 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.3E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 2.3E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 2.3E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 2.3E-29 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 353 4.2E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 855 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 SUPERFAMILY SSF52540 176 546 1.09E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Gene3D G3DSA:3.40.50.300 165 359 1.0E-61 T 11-10-2018 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Gene3D G3DSA:3.40.50.300 360 546 1.3E-42 T 11-10-2018 AL538_16950 98672dc2bd1ca3998e5897848847b8fd 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 845 2.8E-11 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_01200 81f56d0173602f15c2af61358a876cf6 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 1.3E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 1.3E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 Gene3D G3DSA:3.20.80.10 139 311 9.3E-27 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_01200 81f56d0173602f15c2af61358a876cf6 312 SMART SM00342 28 111 5.8E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 SMART SM00871 139 304 1.3E-21 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AL538_01200 81f56d0173602f15c2af61358a876cf6 312 Pfam PF12833 Helix-turn-helix domain 36 112 2.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 SUPERFAMILY SSF46689 65 115 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 Gene3D G3DSA:1.10.10.60 3 61 4.4E-21 T 11-10-2018 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 Gene3D G3DSA:1.10.10.60 62 116 1.2E-14 T 11-10-2018 AL538_01200 81f56d0173602f15c2af61358a876cf6 312 SUPERFAMILY SSF55136 140 304 4.71E-19 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_01200 81f56d0173602f15c2af61358a876cf6 312 Pfam PF06445 GyrI-like small molecule binding domain 140 303 2.5E-15 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AL538_01200 81f56d0173602f15c2af61358a876cf6 312 SUPERFAMILY SSF46689 12 62 3.72E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 Gene3D G3DSA:1.25.40.10 143 271 3.6E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 Gene3D G3DSA:1.25.40.10 275 363 1.9E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 SMART SM00028 211 244 1.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 SMART SM00028 311 344 56.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 SMART SM00028 277 310 52.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 SMART SM00028 177 210 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_07525 1579bda65bf1fab373dd1b9dd90c74de 365 SUPERFAMILY SSF48452 177 338 8.06E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 Pfam PF01368 DHH family 71 205 2.4E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 Gene3D G3DSA:3.90.1640.30 45 323 1.4E-89 T 11-10-2018 AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 SUPERFAMILY SSF64182 45 463 2.22E-119 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 2.5E-159 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 Gene3D G3DSA:3.10.310.30 325 456 1.4E-30 T 11-10-2018 AL538_11900 c282b6f90358fe9e583d57a1e6171607 579 Pfam PF02272 DHHA1 domain 319 451 8.5E-27 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 Pfam PF01345 Domain of unknown function DUF11 2322 2387 1.4E-7 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3284 3333 2.7E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2869 2906 2.1E-5 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 539 573 2.4E-6 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2324 2360 2.0E-5 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 992 1028 0.0011 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2597 2634 8.0E-4 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_27390 8f9940940f4abb0475e61832f53c2ab7 3693 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2187 2214 1.9E-4 T 11-10-2018 IPR001434 Domain of unknown function DUF11 AL538_13930 f5c88113333b4535904ee9bf259dbfcc 474 SUPERFAMILY SSF56349 218 441 1.91E-17 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_13930 f5c88113333b4535904ee9bf259dbfcc 474 Gene3D G3DSA:1.10.443.10 212 456 4.1E-20 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_13930 f5c88113333b4535904ee9bf259dbfcc 474 Pfam PF00589 Phage integrase family 226 434 1.9E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_03150 e43a9b05e3caddcf0eb9bf5ac042cc49 360 PIRSF PIRSF028101 4 360 7.1E-162 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL538_03150 e43a9b05e3caddcf0eb9bf5ac042cc49 360 SUPERFAMILY SSF50969 61 314 1.57E-9 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL538_03150 e43a9b05e3caddcf0eb9bf5ac042cc49 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 2.2E-111 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 AL538_27180 48c6b0a6f9d04542ff51586d2afa50de 126 Gene3D G3DSA:1.10.10.60 70 126 7.9E-24 T 11-10-2018 AL538_27180 48c6b0a6f9d04542ff51586d2afa50de 126 Pfam PF08765 Mor transcription activator family 39 125 4.6E-23 T 11-10-2018 IPR014875 Mor transcription activator AL538_27180 48c6b0a6f9d04542ff51586d2afa50de 126 SUPERFAMILY SSF46689 31 114 4.12E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 144 173 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 180 202 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 84 108 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 405 421 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 264 280 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 295 311 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PRINTS PR00072 Malic enzyme signature 239 257 2.6E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 SUPERFAMILY SSF53223 4 267 6.4E-110 T 11-10-2018 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.2E-102 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 SUPERFAMILY SSF51735 268 559 8.83E-97 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 Gene3D G3DSA:3.40.50.720 266 562 5.2E-110 T 11-10-2018 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 1.5E-77 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.955 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 PIRSF PIRSF000106 2 560 8.5E-226 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 SMART SM01274 78 258 3.1E-107 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 Gene3D G3DSA:3.40.50.10380 13 265 1.4E-114 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AL538_16430 5d05bbf64a2d46d4caee449634d7f9d1 562 SMART SM00919 268 528 4.3E-133 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AL538_20295 eac30326457ab099b26c003f3c94bef7 266 SUPERFAMILY SSF161098 68 253 4.58E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_20295 eac30326457ab099b26c003f3c94bef7 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 255 2.7E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_20295 eac30326457ab099b26c003f3c94bef7 266 Gene3D G3DSA:1.10.3720.10 63 260 7.5E-27 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 PIRSF PIRSF005496 1 820 0.0 T 11-10-2018 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Gene3D G3DSA:3.40.50.300 180 345 3.7E-50 T 11-10-2018 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Gene3D G3DSA:1.20.120.1080 371 465 1.3E-8 T 11-10-2018 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 3.2E-9 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Pfam PF00270 DEAD/DEAH box helicase 11 160 9.1E-10 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 SMART SM00487 2 186 1.9E-12 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Pfam PF00271 Helicase conserved C-terminal domain 206 326 5.0E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 SUPERFAMILY SSF52540 12 434 1.28E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Gene3D G3DSA:3.40.50.300 1 179 6.3E-52 T 11-10-2018 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 SMART SM00490 226 327 7.3E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 SMART SM00847 387 483 3.1E-9 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 1.1E-51 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AL538_06395 30371f5b3ddcc7bbb0efe6e0c06e95a9 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AL538_17355 f3c9b545f9965e1c2a28f4d823dda948 236 SUPERFAMILY SSF53167 3 234 9.56E-92 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_17355 f3c9b545f9965e1c2a28f4d823dda948 236 Pfam PF01048 Phosphorylase superfamily 17 222 2.1E-34 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_17355 f3c9b545f9965e1c2a28f4d823dda948 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 5.7E-113 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_17355 f3c9b545f9965e1c2a28f4d823dda948 236 Gene3D G3DSA:3.40.50.1580 1 236 8.0E-76 T 11-10-2018 AL538_17355 f3c9b545f9965e1c2a28f4d823dda948 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.853 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_01290 ee51730421883c140ba65fe1d6169124 189 Pfam PF02630 SCO1/SenC 27 170 6.4E-33 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_01290 ee51730421883c140ba65fe1d6169124 189 SUPERFAMILY SSF52833 29 188 9.3E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_01290 ee51730421883c140ba65fe1d6169124 189 Gene3D G3DSA:3.40.30.10 21 187 1.1E-41 T 11-10-2018 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 SUPERFAMILY SSF56784 25 233 3.53E-42 T 11-10-2018 IPR036412 HAD-like superfamily AL538_17725 691d90b8e1eef03d151d51c3421de622 244 Gene3D G3DSA:3.40.50.1000 26 229 1.1E-46 T 11-10-2018 IPR023214 HAD superfamily AL538_17725 691d90b8e1eef03d151d51c3421de622 244 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 210 1.5E-28 T 11-10-2018 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 160 210 3.4E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 25 36 1.7E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 199 212 1.7E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 121 134 1.7E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 1.7E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_17725 691d90b8e1eef03d151d51c3421de622 244 Gene3D G3DSA:1.10.150.240 38 108 1.1E-46 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 Gene3D G3DSA:3.30.565.10 253 392 1.0E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 SUPERFAMILY SSF47384 175 247 9.22E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 SMART SM00387 291 394 8.3E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 SMART SM00388 189 252 2.8E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 SUPERFAMILY SSF55874 275 391 3.8E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 Gene3D G3DSA:1.10.287.130 141 252 3.0E-13 T 11-10-2018 AL538_25580 0b1d90c375c637ac36835666d0db86ad 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 388 1.3E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_09240 d8e5512ffc938270d3c5d7fce815a20f 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 1.1E-38 T 11-10-2018 IPR022080 Protein of unknown function DUF3630 AL538_16625 f66457ee68f3c90deb3a5a9fdf6a9d40 95 SUPERFAMILY SSF54909 4 88 1.3E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_16625 f66457ee68f3c90deb3a5a9fdf6a9d40 95 Gene3D G3DSA:3.30.70.100 1 93 5.1E-20 T 11-10-2018 AL538_16625 f66457ee68f3c90deb3a5a9fdf6a9d40 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 80 6.5E-10 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL538_05300 7d34c0d1ed10aee2a351a83acafe0ff8 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 3.4E-92 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL538_05300 7d34c0d1ed10aee2a351a83acafe0ff8 208 Gene3D G3DSA:3.40.50.2020 1 208 9.4E-74 T 11-10-2018 AL538_05300 7d34c0d1ed10aee2a351a83acafe0ff8 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.567 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AL538_05300 7d34c0d1ed10aee2a351a83acafe0ff8 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.7E-65 T 11-10-2018 AL538_05300 7d34c0d1ed10aee2a351a83acafe0ff8 208 SUPERFAMILY SSF53271 3 206 1.14E-66 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_04940 477d71ac5bc5317506fa037df7660cbe 405 Gene3D G3DSA:1.25.40.10 153 292 3.6E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_04940 477d71ac5bc5317506fa037df7660cbe 405 SUPERFAMILY SSF48452 161 265 9.11E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_04940 477d71ac5bc5317506fa037df7660cbe 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 7.7E-31 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AL538_04940 477d71ac5bc5317506fa037df7660cbe 405 Pfam PF14559 Tetratricopeptide repeat 176 244 1.2E-7 T 11-10-2018 AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 SUPERFAMILY SSF51735 1 249 3.85E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 Gene3D G3DSA:3.40.50.720 1 250 4.6E-81 T 11-10-2018 AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 247 9.4E-59 T 11-10-2018 AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 3 250 5.6E-131 T 11-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_19680 6aff8f79963cca4d8ca76b3ffdde2e50 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_13685 5ad1eb3a973968a4f3b3f299cae0835c 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13685 5ad1eb3a973968a4f3b3f299cae0835c 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.2E-46 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AL538_13685 5ad1eb3a973968a4f3b3f299cae0835c 149 SUPERFAMILY SSF46785 5 135 7.5E-44 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13685 5ad1eb3a973968a4f3b3f299cae0835c 149 Gene3D G3DSA:3.30.1490.190 85 141 1.1E-23 T 11-10-2018 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 SMART SM00857 20 162 1.7E-49 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 Pfam PF00239 Resolvase, N terminal domain 21 161 7.5E-38 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 Gene3D G3DSA:3.40.50.1390 20 162 1.2E-36 T 11-10-2018 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 80 92 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 ProSitePatterns PS00397 Site-specific recombinases active site. 23 31 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL538_21235 218a2616a16f6387eec9476b0511b3df 203 SUPERFAMILY SSF53041 19 161 1.7E-37 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 SUPERFAMILY SSF55594 4 90 6.15E-25 T 11-10-2018 IPR035895 HPr-like superfamily AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 Gene3D G3DSA:3.30.1340.10 1 85 2.8E-27 T 11-10-2018 IPR035895 HPr-like superfamily AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 4.9E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.2E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.2E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.2E-9 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_07390 75545a705e31ed7bb34b22cebaa967a7 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 6.8E-22 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 Gene3D G3DSA:3.30.450.90 147 286 8.4E-44 T 11-10-2018 AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 Pfam PF00437 Type II/IV secretion system protein 189 453 4.6E-78 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 SUPERFAMILY SSF52540 181 558 4.31E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 5.0E-23 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 Gene3D G3DSA:3.30.300.160 63 145 4.3E-6 T 11-10-2018 AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 SMART SM00382 314 435 0.0012 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 Gene3D G3DSA:3.40.50.300 289 565 5.1E-101 T 11-10-2018 AL538_07520 54e7993d6d156dc2f843d940ade1b9b9 574 SUPERFAMILY SSF160246 3 145 2.43E-40 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL538_07970 5b8d1f54f2e8e8a3b4496738d1837cc7 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.2E-35 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AL538_07970 5b8d1f54f2e8e8a3b4496738d1837cc7 159 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 1.3E-28 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 AL538_18010 6e8404ff67b404af0169807d7fabc4b2 156 Pfam PF00583 Acetyltransferase (GNAT) family 35 134 8.0E-8 T 11-10-2018 IPR000182 GNAT domain AL538_18010 6e8404ff67b404af0169807d7fabc4b2 156 SUPERFAMILY SSF55729 30 153 7.21E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_18010 6e8404ff67b404af0169807d7fabc4b2 156 Gene3D G3DSA:3.40.630.30 10 156 2.8E-21 T 11-10-2018 AL538_00345 e2dadb1bae9916c4961c0d76c9eca280 94 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 88 2.0E-38 T 11-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype AL538_00345 e2dadb1bae9916c4961c0d76c9eca280 94 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 88 6.6E-36 T 11-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype AL538_00345 e2dadb1bae9916c4961c0d76c9eca280 94 Gene3D G3DSA:3.30.70.240 1 77 3.3E-32 T 11-10-2018 AL538_26725 3937397175b2fc8a6ac472672cc84ac0 217 Gene3D G3DSA:3.40.30.10 1 211 2.4E-66 T 11-10-2018 AL538_26725 3937397175b2fc8a6ac472672cc84ac0 217 Pfam PF01323 DSBA-like thioredoxin domain 6 208 2.3E-34 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AL538_26725 3937397175b2fc8a6ac472672cc84ac0 217 SUPERFAMILY SSF52833 5 213 7.59E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_20845 f315bc83394293a0fe082c04894b0440 279 Pfam PF12294 Protein of unknown function (DUF3626) 152 262 3.2E-24 T 11-10-2018 IPR022074 Protein of unknown function DUF3626 AL538_20845 f315bc83394293a0fe082c04894b0440 279 Pfam PF12294 Protein of unknown function (DUF3626) 29 157 1.6E-42 T 11-10-2018 IPR022074 Protein of unknown function DUF3626 AL538_23725 ca361396e381941f705e8ccc85ab81c4 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 337 1.9E-68 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL538_23725 ca361396e381941f705e8ccc85ab81c4 364 SUPERFAMILY SSF51395 2 361 7.33E-100 T 11-10-2018 AL538_23725 ca361396e381941f705e8ccc85ab81c4 364 Gene3D G3DSA:3.20.20.70 2 363 2.9E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 SMART SM00418 15 93 1.8E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 1.3E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 9.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 9.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 9.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 9.5E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 SUPERFAMILY SSF46785 9 96 1.44E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11975 f35e050bae892e5c97d50fbd2216c341 101 Gene3D G3DSA:1.10.10.10 1 98 4.5E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07345 908e8f1460e2e3d97d555ea1e2bab304 321 Gene3D G3DSA:1.20.1420.30 35 308 1.1E-85 T 11-10-2018 AL538_07345 908e8f1460e2e3d97d555ea1e2bab304 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 3.1E-28 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL538_07345 908e8f1460e2e3d97d555ea1e2bab304 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 4.6E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AL538_07345 908e8f1460e2e3d97d555ea1e2bab304 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-82 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AL538_07345 908e8f1460e2e3d97d555ea1e2bab304 321 Gene3D G3DSA:1.20.58.1130 8 206 1.1E-85 T 11-10-2018 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 SMART SM00304 335 388 2.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 SUPERFAMILY SSF58104 361 665 1.7E-65 T 11-10-2018 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 Gene3D G3DSA:1.10.287.950 335 666 5.1E-65 T 11-10-2018 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 622 2.2E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 162 1.1E-13 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 SMART SM00283 403 664 2.5E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_22890 f74d1fe4db2cd52965a6a3dac73ca75e 666 Pfam PF00672 HAMP domain 338 379 1.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PIRSF PIRSF005419 2 708 4.6E-266 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 73 92 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 36 49 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 5.0E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 Gene3D G3DSA:1.10.8.540 518 606 2.8E-32 T 11-10-2018 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 Gene3D G3DSA:1.10.490.80 608 706 6.8E-34 T 11-10-2018 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 140 163 - T 11-10-2018 IPR025505 FHIPEP conserved site AL538_15270 4f855c336446e805a4c30db22bacda3f 708 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 17 706 5.7E-300 T 11-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 Pfam PF00771 FHIPEP family 29 698 7.1E-239 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_15270 4f855c336446e805a4c30db22bacda3f 708 Gene3D G3DSA:3.40.30.60 372 517 1.7E-42 T 11-10-2018 AL538_17055 fab760c09f77e4a301207ed08309a323 477 SUPERFAMILY SSF55811 27 151 4.87E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_17055 fab760c09f77e4a301207ed08309a323 477 Pfam PF01569 PAP2 superfamily 242 353 4.8E-7 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_17055 fab760c09f77e4a301207ed08309a323 477 SUPERFAMILY SSF48317 149 354 3.05E-9 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL538_17055 fab760c09f77e4a301207ed08309a323 477 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_17055 fab760c09f77e4a301207ed08309a323 477 Gene3D G3DSA:3.90.79.10 23 127 3.9E-14 T 11-10-2018 AL538_17055 fab760c09f77e4a301207ed08309a323 477 Pfam PF00293 NUDIX domain 32 121 8.3E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 1.0E-19 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 SUPERFAMILY SSF56059 115 326 3.53E-43 T 11-10-2018 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 SUPERFAMILY SSF52440 3 114 2.21E-27 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Gene3D G3DSA:3.40.50.20 18 325 1.8E-78 T 11-10-2018 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.881 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Gene3D G3DSA:3.30.470.20 104 319 1.8E-78 T 11-10-2018 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 1.3E-96 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Gene3D G3DSA:3.30.1490.20 131 198 1.8E-78 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 PIRSF PIRSF039102 1 329 5.6E-76 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_24275 574e897c512ed48d798fc4eee7fa1027 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 3.1E-52 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_10615 e7c74b3a37cea084a253ed4fd0bd2e00 418 SUPERFAMILY SSF53756 169 381 1.57E-12 T 11-10-2018 AL538_10615 e7c74b3a37cea084a253ed4fd0bd2e00 418 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 173 378 3.4E-11 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AL538_10615 e7c74b3a37cea084a253ed4fd0bd2e00 418 Gene3D G3DSA:3.40.50.12580 216 392 7.1E-7 T 11-10-2018 AL538_25095 18de4de90a0144988ebbf5c38724ad0e 281 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AL538_25095 18de4de90a0144988ebbf5c38724ad0e 281 Gene3D G3DSA:3.90.226.10 2 281 1.2E-66 T 11-10-2018 AL538_25095 18de4de90a0144988ebbf5c38724ad0e 281 SUPERFAMILY SSF52096 4 245 8.44E-53 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_25095 18de4de90a0144988ebbf5c38724ad0e 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 246 5.7E-32 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_20260 30c2dd2fb1fd1c09d74382d7faa86dba 364 SUPERFAMILY SSF48695 14 176 1.03E-48 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_20260 30c2dd2fb1fd1c09d74382d7faa86dba 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 2.3E-66 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AL538_20260 30c2dd2fb1fd1c09d74382d7faa86dba 364 Gene3D G3DSA:1.10.3820.10 2 180 8.2E-36 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily AL538_20260 30c2dd2fb1fd1c09d74382d7faa86dba 364 PIRSF PIRSF000014 1 364 1.5E-159 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 AL538_03835 530b148ad994e0bb26d409540668b690 381 Gene3D G3DSA:3.40.1090.10 16 119 3.3E-10 T 11-10-2018 AL538_03835 530b148ad994e0bb26d409540668b690 381 Gene3D G3DSA:3.40.1090.10 140 262 2.8E-6 T 11-10-2018 AL538_03835 530b148ad994e0bb26d409540668b690 381 SUPERFAMILY SSF52151 24 301 2.56E-34 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL538_03835 530b148ad994e0bb26d409540668b690 381 Pfam PF01734 Patatin-like phospholipase 30 199 1.7E-18 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL538_04935 df7c575053de5af1b310603042153793 259 Pfam PF04333 MlaA lipoprotein 41 233 3.1E-62 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL538_04935 df7c575053de5af1b310603042153793 259 PRINTS PR01805 VacJ lipoprotein signature 43 56 4.9E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL538_04935 df7c575053de5af1b310603042153793 259 PRINTS PR01805 VacJ lipoprotein signature 112 129 4.9E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL538_04935 df7c575053de5af1b310603042153793 259 PRINTS PR01805 VacJ lipoprotein signature 149 166 4.9E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL538_04935 df7c575053de5af1b310603042153793 259 PRINTS PR01805 VacJ lipoprotein signature 61 77 4.9E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 Gene3D G3DSA:3.40.50.12740 2 209 3.5E-60 T 11-10-2018 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 SUPERFAMILY SSF46894 136 210 1.22E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 SUPERFAMILY SSF52172 2 132 5.55E-34 T 11-10-2018 IPR011006 CheY-like superfamily AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 SMART SM00421 146 203 2.6E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 SMART SM00448 2 115 3.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03320 ff2174181d4c53e7f68678fef5c7310a 214 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 SUPERFAMILY SSF52922 190 323 1.18E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 3.9E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 Gene3D G3DSA:3.40.50.970 1 192 2.0E-73 T 11-10-2018 AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 SUPERFAMILY SSF52518 4 191 1.07E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 SMART SM00861 4 179 3.5E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 Gene3D G3DSA:3.40.50.920 198 324 8.1E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AL538_25335 f27077d37b4c40d415a0a2e54e788137 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 3.2E-36 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AL538_22195 e47c5c099a78b8cfe267b2d3fd6ce85f 302 SUPERFAMILY SSF103481 187 283 1.06E-10 T 11-10-2018 AL538_22195 e47c5c099a78b8cfe267b2d3fd6ce85f 302 Pfam PF00892 EamA-like transporter family 3 135 4.1E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_22195 e47c5c099a78b8cfe267b2d3fd6ce85f 302 Pfam PF00892 EamA-like transporter family 151 280 1.2E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_22195 e47c5c099a78b8cfe267b2d3fd6ce85f 302 SUPERFAMILY SSF103481 35 138 2.88E-11 T 11-10-2018 AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 SUPERFAMILY SSF46785 1 74 8.56E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 1.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 Pfam PF03466 LysR substrate binding domain 90 295 1.3E-20 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 Gene3D G3DSA:3.40.190.10 85 292 1.5E-48 T 11-10-2018 AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 Gene3D G3DSA:3.40.190.10 168 267 1.5E-48 T 11-10-2018 AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 Gene3D G3DSA:1.10.10.10 1 82 1.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21990 ba72ca5e783639ef3364853b6c214fc2 301 SUPERFAMILY SSF53850 85 294 9.95E-37 T 11-10-2018 AL538_12185 00aac02e45af0b133310bd4235132d0d 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_12185 00aac02e45af0b133310bd4235132d0d 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 3.3E-21 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal AL538_12185 00aac02e45af0b133310bd4235132d0d 466 Pfam PF01136 Peptidase family U32 80 355 1.6E-96 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_12185 00aac02e45af0b133310bd4235132d0d 466 Gene3D G3DSA:2.40.30.10 367 453 2.2E-8 T 11-10-2018 AL538_26520 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 11-10-2018 AL538_26520 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 11-10-2018 AL538_26520 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 11-10-2018 AL538_23720 dc21e30da124c2ffb626d2d4a5e4cbc4 290 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 276 5.7E-82 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL538_23720 dc21e30da124c2ffb626d2d4a5e4cbc4 290 Gene3D G3DSA:1.10.357.140 13 166 9.6E-19 T 11-10-2018 AL538_23720 dc21e30da124c2ffb626d2d4a5e4cbc4 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AL538_23720 dc21e30da124c2ffb626d2d4a5e4cbc4 290 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.879 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AL538_23720 dc21e30da124c2ffb626d2d4a5e4cbc4 290 Pfam PF01040 UbiA prenyltransferase family 18 269 6.6E-53 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 255 15.32 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 PRINTS PR00123 ATP synthase A subunit signature 90 106 2.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 PRINTS PR00123 ATP synthase A subunit signature 188 210 2.9E-14 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 ProSitePatterns PS00449 ATP synthase a subunit signature. 191 200 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 SUPERFAMILY SSF81336 85 248 3.79E-44 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 Gene3D G3DSA:1.20.120.220 81 255 7.7E-61 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 Pfam PF00119 ATP synthase A chain 32 248 4.9E-56 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23140 0596a876e63b7558d1c8f4c84e2a5cd0 255 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 249 1.3E-42 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_05555 3b30a12c8f0bc50263303b5f9e1f5669 370 Gene3D G3DSA:3.30.1490.20 102 185 1.3E-9 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_05555 3b30a12c8f0bc50263303b5f9e1f5669 370 Gene3D G3DSA:3.30.470.20 186 268 1.3E-9 T 11-10-2018 AL538_05555 3b30a12c8f0bc50263303b5f9e1f5669 370 SUPERFAMILY SSF56059 106 274 4.88E-11 T 11-10-2018 AL538_05555 3b30a12c8f0bc50263303b5f9e1f5669 370 Gene3D G3DSA:3.40.50.20 3 101 1.3E-9 T 11-10-2018 AL538_05555 3b30a12c8f0bc50263303b5f9e1f5669 370 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 258 265 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AL538_21435 1d071a2bb631a04a1bdd3c0c803dce20 251 Gene3D G3DSA:3.20.20.140 3 248 7.3E-64 T 11-10-2018 AL538_21435 1d071a2bb631a04a1bdd3c0c803dce20 251 SMART SM00481 6 80 1.2E-6 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL538_21435 1d071a2bb631a04a1bdd3c0c803dce20 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 52.145 T 11-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AL538_21435 1d071a2bb631a04a1bdd3c0c803dce20 251 SUPERFAMILY SSF89550 5 244 7.19E-61 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.70.1320 139 327 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.70.1440 660 856 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:1.20.1640.10 502 1013 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.70.1430 46 803 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82866 791 1019 1.83E-49 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82714 185 266 3.4E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82714 719 793 4.71E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82693 149 325 3.4E-10 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 1.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 1.0E-20 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.2090.10 708 795 5.0E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82693 46 138 1.1E-17 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.70.1430 559 659 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:3.30.2090.10 180 270 5.0E-252 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Gene3D G3DSA:1.20.1640.10 16 501 5.0E-252 T 11-10-2018 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 1.2E-156 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_21635 6394559aed3010479a5c4d59b62bd105 1052 SUPERFAMILY SSF82866 292 488 3.79E-35 T 11-10-2018 AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 SUPERFAMILY SSF53697 112 269 9.51E-20 T 11-10-2018 AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 SUPERFAMILY SSF46689 14 88 4.03E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 83 7.8E-9 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 Gene3D G3DSA:1.10.10.10 11 85 9.5E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 Pfam PF01380 SIS domain 147 269 2.9E-14 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_18390 1b66aee34fa75880d0d45fa34eabcb4d 277 Gene3D G3DSA:3.40.50.10490 112 276 1.9E-23 T 11-10-2018 AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 SUPERFAMILY SSF53850 88 292 7.42E-43 T 11-10-2018 AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 SUPERFAMILY SSF46785 1 87 1.48E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 Gene3D G3DSA:3.40.190.290 90 292 2.4E-62 T 11-10-2018 AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 Gene3D G3DSA:1.10.10.10 1 85 4.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17475 11da03bac3c2fd27bc12afdb69c18abd 299 Pfam PF03466 LysR substrate binding domain 88 291 1.3E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SUPERFAMILY SSF47781 521 609 3.5E-19 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Gene3D G3DSA:3.40.1440.10 6 102 2.7E-31 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SUPERFAMILY SSF46600 190 243 4.71E-13 T 11-10-2018 IPR036876 UVR domain superfamily AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Gene3D G3DSA:1.10.150.20 555 610 1.1E-24 T 11-10-2018 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SMART SM00278 556 575 0.24 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SMART SM00278 588 607 300.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SMART SM00465 17 98 5.7E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.1E-9 T 11-10-2018 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 4.7E-43 T 11-10-2018 IPR001162 UvrC family homology region AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Pfam PF02151 UvrB/uvrC motif 204 238 1.5E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.444 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Gene3D G3DSA:3.30.420.340 380 552 6.0E-45 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 SUPERFAMILY SSF82771 16 100 2.48E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease AL538_03315 b4c6bbbe356bb7f91662a99fd8d4cbeb 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 3.1E-213 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AL538_04675 c9438d0162280cf42b82e95469212476 678 SMART SM00283 417 678 9.7E-67 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_04675 c9438d0162280cf42b82e95469212476 678 Gene3D G3DSA:1.10.287.950 347 678 1.5E-67 T 11-10-2018 AL538_04675 c9438d0162280cf42b82e95469212476 678 SUPERFAMILY SSF58104 379 677 1.96E-64 T 11-10-2018 AL538_04675 c9438d0162280cf42b82e95469212476 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 37 323 2.5E-66 T 11-10-2018 IPR033462 Cache 3/Cache 2 fusion domain AL538_04675 c9438d0162280cf42b82e95469212476 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 9.4E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_04675 c9438d0162280cf42b82e95469212476 678 Gene3D G3DSA:3.30.450.20 183 328 2.0E-11 T 11-10-2018 AL538_04675 c9438d0162280cf42b82e95469212476 678 SUPERFAMILY SSF103190 115 211 6.67E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_04675 c9438d0162280cf42b82e95469212476 678 SMART SM00304 347 402 4.2E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 Gene3D G3DSA:2.60.120.460 2 139 1.6E-42 T 11-10-2018 IPR035917 YjbQ-like superfamily AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 SUPERFAMILY SSF111038 1 139 2.09E-49 T 11-10-2018 IPR035917 YjbQ-like superfamily AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 PIRSF PIRSF004681 1 139 1.5E-46 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 6.0E-39 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL538_07700 e919bf43088535a34ea3ec437d17de7b 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 1.1E-44 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AL538_18595 af61fc3a6f06804669c03e97f753d39e 657 Gene3D G3DSA:2.40.170.20 42 657 3.2E-146 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_18595 af61fc3a6f06804669c03e97f753d39e 657 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 151 4.9E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_18595 af61fc3a6f06804669c03e97f753d39e 657 Pfam PF00593 TonB dependent receptor 271 655 2.2E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_18595 af61fc3a6f06804669c03e97f753d39e 657 SUPERFAMILY SSF56935 27 657 3.66E-106 T 11-10-2018 AL538_07705 95406100efbe9c1089130c5b15309275 391 Gene3D G3DSA:2.40.160.50 111 389 2.3E-11 T 11-10-2018 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.827 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 SUPERFAMILY SSF82051 2 157 5.75E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 PIRSF PIRSF002401 1 374 3.9E-136 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.4E-142 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 Pfam PF01018 GTP1/OBG 4 156 1.9E-55 T 11-10-2018 IPR006169 GTP1/OBG domain AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 Gene3D G3DSA:3.40.50.300 159 336 1.8E-51 T 11-10-2018 AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 SUPERFAMILY SSF52540 151 340 2.62E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 Gene3D G3DSA:2.70.210.12 1 158 5.2E-58 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AL538_11165 e5c3f2b6d6d024fdad91432a4b705220 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.9E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.1E-39 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF46589 885 948 8.37E-18 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 3.1E-18 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF52374 1 641 7.37E-136 T 11-10-2018 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.059 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 Gene3D G3DSA:1.10.287.380 878 949 4.1E-19 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.6E-226 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 SUPERFAMILY SSF50677 191 365 8.63E-59 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AL538_07255 691f9bd4eec11182c7cbe0f5a7eeac53 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_10140 61f7f3e43b125774c6728b296cdd8747 219 SUPERFAMILY SSF52540 6 197 7.65E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_10140 61f7f3e43b125774c6728b296cdd8747 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_10140 61f7f3e43b125774c6728b296cdd8747 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL538_10140 61f7f3e43b125774c6728b296cdd8747 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.634 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AL538_10140 61f7f3e43b125774c6728b296cdd8747 219 Gene3D G3DSA:3.40.50.300 3 202 2.0E-58 T 11-10-2018 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 SMART SM00342 249 331 9.7E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 SUPERFAMILY SSF46689 286 332 1.83E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 Gene3D G3DSA:1.10.10.60 249 333 3.3E-20 T 11-10-2018 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 2.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 2.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_21260 7168b0a334a931476b4421a643f4c7d5 333 Pfam PF12833 Helix-turn-helix domain 256 332 1.0E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 SMART SM00825 Beta-ketoacyl synthase 6 415 2.4E-15 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.2E-64 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 SUPERFAMILY SSF53901 215 412 4.61E-68 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 Gene3D G3DSA:3.40.47.10 1 255 3.3E-92 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 2.8E-36 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 PIRSF PIRSF000447 1 415 6.8E-203 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 SUPERFAMILY SSF53901 3 252 3.4E-80 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 1.4E-193 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AL538_03885 81fb803045b1b8624d77f3f9b0ca3697 415 Gene3D G3DSA:3.40.47.10 261 413 5.5E-51 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 3.4E-23 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 9 117 4.0E-15 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 4.8E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 4.8E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 4.8E-10 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_21380 beba6fc3dacd2a50982a6a4370d7dfec 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 14.643 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 Gene3D G3DSA:3.30.300.30 374 476 9.5E-15 T 11-10-2018 AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 35 465 6.3E-128 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 SUPERFAMILY SSF56801 13 471 7.72E-82 T 11-10-2018 AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 Pfam PF00501 AMP-binding enzyme 16 377 2.8E-43 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_14330 acdd5bfcbf07372b0a5f9814b92346ce 477 Gene3D G3DSA:3.40.50.12780 12 373 2.3E-60 T 11-10-2018 AL538_18085 a07837867f49df96c44e33c015498cab 278 Pfam PF13505 Outer membrane protein beta-barrel domain 69 267 8.5E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_18085 a07837867f49df96c44e33c015498cab 278 SUPERFAMILY SSF56925 56 278 1.49E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 Gene3D G3DSA:2.130.10.120 70 403 6.3E-246 T 11-10-2018 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 1.1E-118 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 Gene3D G3DSA:3.40.50.1820 12 642 6.3E-246 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 1.5E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 Pfam PF00326 Prolyl oligopeptidase family 459 674 4.2E-70 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 SUPERFAMILY SSF53474 411 653 6.42E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_17470 c0a4c1651fa11869c9ff80d79e2886de 679 SUPERFAMILY SSF50993 1 407 2.62E-93 T 11-10-2018 AL538_18005 bb9e285956f4b2688ff59d8f081b07fe 152 SUPERFAMILY SSF55729 11 145 1.36E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_18005 bb9e285956f4b2688ff59d8f081b07fe 152 Gene3D G3DSA:3.40.630.30 1 152 5.4E-42 T 11-10-2018 AL538_18005 bb9e285956f4b2688ff59d8f081b07fe 152 Pfam PF00583 Acetyltransferase (GNAT) family 29 129 3.8E-14 T 11-10-2018 IPR000182 GNAT domain AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 2.4E-63 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 PIRSF PIRSF002070 2 174 1.3E-36 T 11-10-2018 AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 SUPERFAMILY SSF50249 4 179 1.95E-64 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 Pfam PF00436 Single-strand binding protein family 6 106 6.7E-44 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AL538_07560 4c7638be69ba3e0c864ff50c4bdfc955 179 Gene3D G3DSA:2.40.50.140 2 146 2.9E-51 T 11-10-2018 AL538_12055 d5f4503dad542540eed89d4e590d8b06 357 Gene3D G3DSA:3.20.20.70 3 348 1.8E-157 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_12055 d5f4503dad542540eed89d4e590d8b06 357 PIRSF PIRSF001361 1 354 8.3E-164 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_12055 d5f4503dad542540eed89d4e590d8b06 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 1.5E-163 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AL538_12055 d5f4503dad542540eed89d4e590d8b06 357 SUPERFAMILY SSF51569 8 345 2.41E-139 T 11-10-2018 AL538_12055 d5f4503dad542540eed89d4e590d8b06 357 Pfam PF00793 DAHP synthetase I family 41 340 4.6E-105 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_04515 140c1b8e7da7902f7318836c15223818 251 SMART SM00910 121 226 7.5E-5 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 AL538_04515 140c1b8e7da7902f7318836c15223818 251 Gene3D G3DSA:3.30.70.2330 117 213 3.1E-7 T 11-10-2018 AL538_04515 140c1b8e7da7902f7318836c15223818 251 Pfam PF08797 HIRAN domain 125 223 4.7E-6 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 SUPERFAMILY SSF52540 123 378 9.87E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 SMART SM00490 519 603 2.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 1.8E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:3.40.50.10810 628 713 1.0E-5 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:3.40.50.10810 150 437 9.8E-105 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 5.7E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 SUPERFAMILY SSF52540 273 650 5.32E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:2.30.30.930 55 114 5.7E-26 T 11-10-2018 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 3.9E-148 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:3.40.50.300 483 627 8.7E-26 T 11-10-2018 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.197 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 11-10-2018 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 11-10-2018 AL538_07425 48cb82b27a1910d9ae1c3bbce796bbf0 969 SMART SM00487 150 342 1.3E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Gene3D G3DSA:3.20.20.80 27 345 8.7E-96 T 11-10-2018 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Gene3D G3DSA:2.60.40.10 425 504 2.4E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Pfam PF00704 Glycosyl hydrolases family 18 34 317 8.4E-34 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 SMART SM00636 32 317 7.2E-4 T 11-10-2018 IPR011583 Chitinase II GO:0008061 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 SMART SM00495 507 557 2.0E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Pfam PF16403 Domain of unknown function (DUF5011) 431 501 6.8E-18 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Pfam PF16403 Domain of unknown function (DUF5011) 355 424 1.9E-17 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 ProSitePatterns PS01095 Chitinases family 18 active site. 146 154 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 Gene3D G3DSA:2.60.40.10 346 424 5.5E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_24805 e7fcb59fd7e093677e284ba659a1a286 561 SUPERFAMILY SSF51445 30 326 1.79E-59 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_00825 661e5c94b17965f1b3a465a19422521e 546 Gene3D G3DSA:3.40.50.300 21 203 1.2E-12 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 SUPERFAMILY SSF54211 314 506 1.25E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_00825 661e5c94b17965f1b3a465a19422521e 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 7.3E-11 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 7.3E-11 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 7.3E-11 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 7.3E-11 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 Pfam PF13654 AAA domain 75 288 1.5E-24 T 11-10-2018 AL538_00825 661e5c94b17965f1b3a465a19422521e 546 Gene3D G3DSA:3.30.230.10 291 532 4.1E-93 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_00825 661e5c94b17965f1b3a465a19422521e 546 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 505 8.6E-11 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL538_10825 996be9dece12785849121657f8c4d005 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 1.8E-94 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10825 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 11-10-2018 AL538_10825 996be9dece12785849121657f8c4d005 209 SUPERFAMILY SSF50447 1 208 5.12E-84 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_10825 996be9dece12785849121657f8c4d005 209 Pfam PF00297 Ribosomal protein L3 66 182 2.2E-16 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10825 996be9dece12785849121657f8c4d005 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AL538_10825 996be9dece12785849121657f8c4d005 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.993 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10825 996be9dece12785849121657f8c4d005 209 Gene3D G3DSA:2.40.30.10 128 209 6.7E-20 T 11-10-2018 AL538_25365 3e4174157368a383320f454d3815b11c 323 PIRSF PIRSF006268 1 313 7.5E-95 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL538_25365 3e4174157368a383320f454d3815b11c 323 Pfam PF02424 ApbE family 13 292 3.0E-72 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 AL538_25365 3e4174157368a383320f454d3815b11c 323 Gene3D G3DSA:3.10.520.20 1 313 5.8E-99 T 11-10-2018 AL538_25365 3e4174157368a383320f454d3815b11c 323 SUPERFAMILY SSF143631 6 308 6.02E-89 T 11-10-2018 IPR003374 ApbE-like superfamily AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 Gene3D G3DSA:1.10.510.10 60 258 1.4E-123 T 11-10-2018 AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 Gene3D G3DSA:3.30.200.70 13 108 1.4E-123 T 11-10-2018 AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 Gene3D G3DSA:1.20.1270.170 149 307 1.4E-123 T 11-10-2018 AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 Pfam PF01636 Phosphotransferase enzyme family 36 256 1.3E-39 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.663 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 AL538_09505 7d6c24ccd840d9e66c2efb99509dfcbb 328 SUPERFAMILY SSF56112 6 328 3.06E-89 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 6.1E-56 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 7.2E-86 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 Pfam PF02355 Protein export membrane protein 111 292 1.4E-70 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 SUPERFAMILY SSF82866 73 293 3.27E-41 T 11-10-2018 AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 Gene3D G3DSA:1.20.1640.10 105 300 3.6E-12 T 11-10-2018 AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12320 f118fb30b5d9c742d411bacb9f375f9d 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.953 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL538_03990 bbee6556d579245f366a242d25b5f4f0 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 0.0 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL538_03990 bbee6556d579245f366a242d25b5f4f0 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 4.8E-304 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL538_03990 bbee6556d579245f366a242d25b5f4f0 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.865 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 SMART SM00267 372 540 8.1E-59 T 11-10-2018 IPR000160 GGDEF domain AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 SUPERFAMILY SSF55073 388 538 6.43E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 Pfam PF00990 Diguanylate cyclase, GGDEF domain 383 535 1.1E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 Pfam PF02743 Cache domain 87 255 3.3E-20 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 539 7.7E-49 T 11-10-2018 IPR000160 GGDEF domain AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 Gene3D G3DSA:3.30.70.270 369 540 7.5E-52 T 11-10-2018 AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 Gene3D G3DSA:1.20.1480.50 259 351 6.2E-8 T 11-10-2018 AL538_26970 8945872394bcdc1dcc5af4050636d28e 545 Gene3D G3DSA:3.30.450.20 132 258 8.3E-19 T 11-10-2018 AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 SUPERFAMILY SSF55486 3 150 7.32E-50 T 11-10-2018 AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 2.8E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.674 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 6.1E-38 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AL538_13115 2bf9ba4f90111c149b1168201ea53ea4 154 Gene3D G3DSA:3.40.390.30 1 154 5.3E-60 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AL538_01105 b6b85f78f7d9336c9e0df673a6aec930 362 Gene3D G3DSA:1.25.40.10 53 315 1.6E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_01105 b6b85f78f7d9336c9e0df673a6aec930 362 SUPERFAMILY SSF48452 81 225 6.64E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_26580 3b866ac2ed11060c465d06d7da882def 543 SUPERFAMILY SSF58104 232 542 1.57E-75 T 11-10-2018 AL538_26580 3b866ac2ed11060c465d06d7da882def 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 508 1.7E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_26580 3b866ac2ed11060c465d06d7da882def 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 171 1.3E-19 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL538_26580 3b866ac2ed11060c465d06d7da882def 543 Gene3D G3DSA:1.10.287.950 210 543 2.6E-78 T 11-10-2018 AL538_26580 3b866ac2ed11060c465d06d7da882def 543 SMART SM00283 280 541 2.6E-77 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_05240 5af40ec15a003200782b548faf1386e1 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 33.669 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AL538_05240 5af40ec15a003200782b548faf1386e1 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 7.6E-104 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein AL538_05240 5af40ec15a003200782b548faf1386e1 339 Gene3D G3DSA:3.30.310.170 221 339 1.2E-41 T 11-10-2018 AL538_05240 5af40ec15a003200782b548faf1386e1 339 PIRSF PIRSF026343 4 339 2.2E-117 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC AL538_05240 5af40ec15a003200782b548faf1386e1 339 Gene3D G3DSA:3.30.530.50 97 207 1.1E-12 T 11-10-2018 AL538_24115 02f96733701cc4ea484923f3469f5168 305 Pfam PF02574 Homocysteine S-methyltransferase 10 300 8.8E-55 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AL538_24115 02f96733701cc4ea484923f3469f5168 305 Gene3D G3DSA:3.20.20.330 2 304 6.5E-66 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL538_24115 02f96733701cc4ea484923f3469f5168 305 SUPERFAMILY SSF82282 5 303 2.88E-75 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AL538_24115 02f96733701cc4ea484923f3469f5168 305 PIRSF PIRSF037505 5 304 4.5E-15 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 PIRSF PIRSF000378 2 125 8.9E-54 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.092 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 2.1E-68 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 Pfam PF01228 Glycine radical 15 106 3.9E-23 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 SUPERFAMILY SSF51998 64 124 1.51E-23 T 11-10-2018 AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 Gene3D G3DSA:3.20.70.20 53 125 2.7E-25 T 11-10-2018 AL538_11830 3bfdc54ead22d857075c0df512d53b2e 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_04535 b379f173c01bc5e1655130447cc1b776 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.4E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 SUPERFAMILY SSF46609 1 84 4.71E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 SUPERFAMILY SSF54719 84 193 1.31E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 Gene3D G3DSA:2.40.500.20 83 194 1.3E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PIRSF PIRSF000349 1 194 1.2E-84 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_04535 b379f173c01bc5e1655130447cc1b776 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.0E-38 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AL538_01535 8dd0df477d1d0037ad485c809d2c49a3 447 Pfam PF03390 2-hydroxycarboxylate transporter family 24 440 2.6E-150 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AL538_01535 8dd0df477d1d0037ad485c809d2c49a3 447 PIRSF PIRSF005348 2 446 9.8E-160 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 AL538_10680 260ac12e522cf29b1268632b0cd36993 345 Pfam PF13685 Iron-containing alcohol dehydrogenase 62 266 6.0E-45 T 11-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AL538_10680 260ac12e522cf29b1268632b0cd36993 345 Gene3D G3DSA:3.40.50.1970 2 153 5.9E-20 T 11-10-2018 AL538_10680 260ac12e522cf29b1268632b0cd36993 345 PIRSF PIRSF000112 29 341 1.1E-54 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AL538_10680 260ac12e522cf29b1268632b0cd36993 345 Gene3D G3DSA:1.20.1090.10 154 344 2.6E-41 T 11-10-2018 AL538_10680 260ac12e522cf29b1268632b0cd36993 345 SUPERFAMILY SSF56796 52 324 1.7E-38 T 11-10-2018 AL538_18195 31eeb99f3fb0d955299679df8a79b406 229 Gene3D G3DSA:2.30.110.10 7 208 1.7E-44 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_18195 31eeb99f3fb0d955299679df8a79b406 229 Pfam PF01613 Flavin reductase like domain 34 167 2.7E-14 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL538_18195 31eeb99f3fb0d955299679df8a79b406 229 SUPERFAMILY SSF50475 10 199 3.14E-30 T 11-10-2018 AL538_18195 31eeb99f3fb0d955299679df8a79b406 229 SMART SM00903 26 181 0.0064 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 Gene3D G3DSA:3.20.20.70 4 315 1.8E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 2.8E-124 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.577 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 SMART SM00876 220 312 6.6E-45 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 SMART SM00729 43 255 1.6E-40 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.5E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 PIRSF PIRSF001619 1 319 7.3E-138 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 Pfam PF04055 Radical SAM superfamily 50 200 2.9E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_15695 04a53d66a8775adf671721885f8abd0f 350 SUPERFAMILY SSF102114 5 310 5.49E-89 T 11-10-2018 AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 PIRSF PIRSF028757 1 330 5.2E-89 T 11-10-2018 IPR003507 Peptidase family S66 AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 SUPERFAMILY SSF52317 1 155 4.58E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 Gene3D G3DSA:3.50.30.60 165 330 2.6E-47 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 SUPERFAMILY SSF141986 173 324 3.4E-37 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 Pfam PF02016 LD-carboxypeptidase 13 318 3.4E-70 T 11-10-2018 IPR003507 Peptidase family S66 AL538_22905 8ab9d26de76ef4833637eed28b1a7e9e 331 Gene3D G3DSA:3.40.50.10740 1 162 2.3E-60 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AL538_18205 3f225377a7f87fe15a2ef97616ef1266 213 Pfam PF01914 MarC family integral membrane protein 8 207 2.2E-52 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_18205 3f225377a7f87fe15a2ef97616ef1266 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 203 1.9E-49 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 Gene3D G3DSA:1.10.10.60 224 334 3.7E-19 T 11-10-2018 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 Pfam PF12833 Helix-turn-helix domain 252 327 1.0E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 SMART SM00342 245 326 3.1E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 310 326 3.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 310 3.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_24535 42f5bbfe01a3340c1fdd255968871c2d 337 SUPERFAMILY SSF46689 287 329 3.99E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03065 ea661b0a804b6474129b8493533cf663 396 Pfam PF00155 Aminotransferase class I and II 27 392 4.2E-82 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_03065 ea661b0a804b6474129b8493533cf663 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AL538_03065 ea661b0a804b6474129b8493533cf663 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_03065 ea661b0a804b6474129b8493533cf663 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_03065 ea661b0a804b6474129b8493533cf663 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_03065 ea661b0a804b6474129b8493533cf663 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AL538_03065 ea661b0a804b6474129b8493533cf663 396 SUPERFAMILY SSF53383 1 395 3.21E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_03065 ea661b0a804b6474129b8493533cf663 396 Gene3D G3DSA:3.40.640.10 60 300 1.4E-157 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_03065 ea661b0a804b6474129b8493533cf663 396 Gene3D G3DSA:3.90.1150.10 5 392 1.4E-157 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_05755 935679072b7f5f6694c158220f4b02f2 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 141 1.5E-29 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 SUPERFAMILY SSF51735 143 316 9.38E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 SUPERFAMILY SSF50129 1 179 5.17E-48 T 11-10-2018 IPR011032 GroES-like superfamily AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 Pfam PF00107 Zinc-binding dehydrogenase 181 311 1.4E-20 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 Gene3D G3DSA:3.90.180.10 11 338 7.2E-94 T 11-10-2018 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 Gene3D G3DSA:3.40.50.720 156 297 7.2E-94 T 11-10-2018 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 127 5.2E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_00185 d28298bf6e6795cc82395eb0c5531af4 350 SMART SM00829 9 348 5.0E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Gene3D G3DSA:3.40.50.300 1 163 8.3E-42 T 11-10-2018 AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 SUPERFAMILY SSF52540 16 326 7.07E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Pfam PF04408 Helicase associated domain (HA2) 373 441 2.4E-5 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 SMART SM00490 219 315 2.2E-15 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Pfam PF00270 DEAD/DEAH box helicase 13 152 6.5E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 SMART SM00487 1 174 1.0E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Pfam PF00271 Helicase conserved C-terminal domain 198 314 1.4E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Gene3D G3DSA:3.40.50.300 168 331 7.3E-44 T 11-10-2018 AL538_16435 c6535ca0bc5c3c9d43d471448817ad89 784 Gene3D G3DSA:1.20.120.1080 355 450 2.4E-7 T 11-10-2018 AL538_09485 63706762326ad0e30bc66638b0621ca3 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 3.6E-69 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AL538_09485 63706762326ad0e30bc66638b0621ca3 217 Pfam PF03006 Haemolysin-III related 12 207 4.0E-38 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AL538_15385 02d4e3ca55c352bc9289eefa8a484b96 253 SMART SM00382 31 225 8.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15385 02d4e3ca55c352bc9289eefa8a484b96 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_15385 02d4e3ca55c352bc9289eefa8a484b96 253 Gene3D G3DSA:3.40.50.300 4 253 5.0E-62 T 11-10-2018 AL538_15385 02d4e3ca55c352bc9289eefa8a484b96 253 Pfam PF00005 ABC transporter 23 178 2.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_15385 02d4e3ca55c352bc9289eefa8a484b96 253 SUPERFAMILY SSF52540 3 250 4.0E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 Gene3D G3DSA:3.40.50.300 4 209 2.0E-62 T 11-10-2018 AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 SUPERFAMILY SSF52540 2 207 8.44E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 6.0E-62 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.101 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AL538_03870 2d769a1f7d833b5f2b07658860fba4a7 210 Pfam PF02223 Thymidylate kinase 9 199 1.4E-57 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.088 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.7E-100 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.6E-102 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 SUPERFAMILY SSF51366 1 266 2.17E-91 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_03395 72891f91aa240ccbe7b34a20d8c1606b 268 Gene3D G3DSA:3.20.20.70 1 268 7.3E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 SUPERFAMILY SSF51726 396 757 3.66E-114 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.868 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 2.7E-119 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 4.3E-150 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 SUPERFAMILY SSF51726 5 393 7.72E-109 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 PIRSF PIRSF000382 2 760 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03440 7423d5b2d55ceb46642c1739df2730b3 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_05675 de31b95b7b2f6d69aedd841917a03213 102 Pfam PF01722 BolA-like protein 10 83 1.3E-29 T 11-10-2018 IPR002634 BolA protein AL538_05675 de31b95b7b2f6d69aedd841917a03213 102 Gene3D G3DSA:3.30.300.90 1 89 2.9E-34 T 11-10-2018 AL538_05675 de31b95b7b2f6d69aedd841917a03213 102 PIRSF PIRSF003113 1 99 3.0E-36 T 11-10-2018 IPR002634 BolA protein AL538_05675 de31b95b7b2f6d69aedd841917a03213 102 SUPERFAMILY SSF82657 1 87 1.57E-30 T 11-10-2018 IPR036065 BolA-like superfamily AL538_22925 07aeaeacba4d1c76673e9b6335609ba1 216 Gene3D G3DSA:3.40.50.880 1 216 4.5E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_22925 07aeaeacba4d1c76673e9b6335609ba1 216 PIRSF PIRSF006320 1 216 3.4E-107 T 11-10-2018 IPR026041 Glyoxalase ElbB AL538_22925 07aeaeacba4d1c76673e9b6335609ba1 216 SUPERFAMILY SSF52317 1 215 9.34E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_22450 6bea6ef1cfad152ecd0f406b60a1caa6 440 SUPERFAMILY SSF56112 98 330 3.21E-17 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_22450 6bea6ef1cfad152ecd0f406b60a1caa6 440 Pfam PF03109 ABC1 family 115 230 5.5E-29 T 11-10-2018 IPR004147 UbiB domain AL538_04595 6e66942930c199d4af578e79512f84c5 602 Pfam PF00884 Sulfatase 270 515 9.9E-22 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_04595 6e66942930c199d4af578e79512f84c5 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 9.3E-99 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AL538_04595 6e66942930c199d4af578e79512f84c5 602 SUPERFAMILY SSF53649 257 584 1.05E-51 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_04595 6e66942930c199d4af578e79512f84c5 602 Gene3D G3DSA:3.40.720.10 249 527 1.4E-39 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_04595 6e66942930c199d4af578e79512f84c5 602 PIRSF PIRSF004950 6 600 1.1E-247 T 11-10-2018 IPR012159 Inner membrane protein YejM AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 SUPERFAMILY SSF46785 6 136 5.86E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 Pfam PF01047 MarR family 32 88 3.5E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 SMART SM00347 24 124 2.0E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_26905 9ac2a3da76bd6e9d4589fe38e88f163c 138 Gene3D G3DSA:1.10.10.10 1 137 9.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 SUPERFAMILY SSF47917 383 511 3.66E-45 T 11-10-2018 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Gene3D G3DSA:1.20.150.20 383 513 1.2E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 9.2E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-129 T 11-10-2018 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.1E-250 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.588 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 SUPERFAMILY SSF52540 96 381 9.3E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.3E-71 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_09600 941d5b35f3b731b221854fce95df9ebb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 72.791 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.0E-31 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 Gene3D G3DSA:3.40.47.10 1 316 9.0E-128 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.8E-34 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 SUPERFAMILY SSF53901 3 315 4.26E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_03905 2f16c1b7deff3f3d8484f2223a23a9f4 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 2.4E-144 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 Gene3D G3DSA:3.20.20.70 2 337 8.2E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 SMART SM01004 9 333 4.3E-245 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 4.2E-141 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 2.4E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 SUPERFAMILY SSF51569 7 335 6.89E-145 T 11-10-2018 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_10125 607922bed16416a9f25c72d654d2b0ef 353 PIRSF PIRSF001415 2 336 3.9E-152 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 Gene3D G3DSA:1.10.10.10 127 194 1.3E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 SUPERFAMILY SSF46894 133 190 3.4E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 SUPERFAMILY SSF52172 2 127 1.01E-23 T 11-10-2018 IPR011006 CheY-like superfamily AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 Gene3D G3DSA:3.40.50.2300 1 126 3.7E-22 T 11-10-2018 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 3.7E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 Pfam PF00072 Response regulator receiver domain 4 115 2.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 SMART SM00448 2 115 8.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 SMART SM00421 135 192 8.8E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 2.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 2.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_23560 4749236ee0869bbdda6df2d544f252a1 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 2.1E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 SUPERFAMILY SSF102114 370 605 6.54E-11 T 11-10-2018 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 SMART SM00729 367 617 2.0E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 6.5E-261 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 Gene3D G3DSA:3.80.30.20 366 626 7.2E-13 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 Pfam PF04055 Radical SAM superfamily 371 576 9.5E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 Pfam PF08497 Radical SAM N-terminal 24 370 1.2E-141 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.808 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 AL538_03465 4776ae66fbd05763a910b76b8bda34ea 788 Pfam PF11842 Domain of unknown function (DUF3362) 585 736 9.3E-43 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AL538_19535 8c6c2df29fd3c05ec794651497d35540 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 60 168 6.6E-13 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AL538_19535 8c6c2df29fd3c05ec794651497d35540 227 Gene3D G3DSA:3.10.620.30 26 219 1.9E-71 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.50.50.60 150 271 2.1E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.5E-68 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 4.5E-151 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PIRSF PIRSF000350 1 468 2.4E-84 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 SUPERFAMILY SSF51905 6 369 2.74E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.6E-40 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.6E-40 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.6E-40 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.6E-40 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.6E-40 T 11-10-2018 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.50.50.60 9 332 2.1E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 SUPERFAMILY SSF55424 346 466 8.93E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 Gene3D G3DSA:3.30.390.30 346 467 1.1E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AL538_06470 9ed5a8a9c8f0118b1b6e2700cc1d01f2 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AL538_07530 e31556b691a48d3eb65d0c087bbc5998 281 Pfam PF13401 AAA domain 42 168 9.9E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_07530 e31556b691a48d3eb65d0c087bbc5998 281 Gene3D G3DSA:3.40.50.300 28 183 3.4E-14 T 11-10-2018 AL538_07530 e31556b691a48d3eb65d0c087bbc5998 281 SUPERFAMILY SSF52540 12 257 8.01E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09920 5e382ce4ebc4f466567318cef7c5b5a2 328 SUPERFAMILY SSF110997 71 143 6.28E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_09920 5e382ce4ebc4f466567318cef7c5b5a2 328 Pfam PF05036 Sporulation related domain 73 143 1.7E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_17730 b4d76fd40f7eead626b29bfbe5f14065 385 Gene3D G3DSA:3.40.50.1970 1 193 3.2E-52 T 11-10-2018 AL538_17730 b4d76fd40f7eead626b29bfbe5f14065 385 SUPERFAMILY SSF56796 2 380 2.49E-101 T 11-10-2018 AL538_17730 b4d76fd40f7eead626b29bfbe5f14065 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 8.8E-104 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_17730 b4d76fd40f7eead626b29bfbe5f14065 385 Gene3D G3DSA:1.20.1090.10 194 383 1.0E-49 T 11-10-2018 AL538_17730 b4d76fd40f7eead626b29bfbe5f14065 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 182 210 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_11395 174d7703a85774913887ad09383f4477 272 Gene3D G3DSA:3.40.50.1820 1 272 3.3E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.1E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_11395 174d7703a85774913887ad09383f4477 272 SUPERFAMILY SSF53474 3 268 2.14E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00412 Epoxide hydrolase signature 45 60 4.3E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00412 Epoxide hydrolase signature 243 265 4.3E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_11395 174d7703a85774913887ad09383f4477 272 PRINTS PR00412 Epoxide hydrolase signature 94 107 4.3E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AL538_11395 174d7703a85774913887ad09383f4477 272 Pfam PF00561 alpha/beta hydrolase fold 23 253 3.0E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13105 db776ef92594a5843dd0a0fac0dd3617 506 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 1.1E-97 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL538_13105 db776ef92594a5843dd0a0fac0dd3617 506 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 4.2E-38 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AL538_13105 db776ef92594a5843dd0a0fac0dd3617 506 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.259 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AL538_13105 db776ef92594a5843dd0a0fac0dd3617 506 SUPERFAMILY SSF56317 214 485 6.93E-40 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL538_13105 db776ef92594a5843dd0a0fac0dd3617 506 Gene3D G3DSA:3.60.110.10 209 476 3.2E-15 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 Pfam PF00691 OmpA family 167 261 2.9E-22 T 11-10-2018 IPR006665 OmpA-like domain AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 SUPERFAMILY SSF103088 157 267 9.55E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 PRINTS PR01021 OMPA domain signature 197 212 8.9E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 PRINTS PR01021 OMPA domain signature 167 189 8.9E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 PRINTS PR01021 OMPA domain signature 212 228 8.9E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_00030 4a0e6fb9805b0958caeaa46ac7981cf3 282 Gene3D G3DSA:3.30.1330.60 155 267 1.3E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_27825 294b735dbc0821fe92cefe09927630fb 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.7E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 PIRSF PIRSF005572 2 384 9.4E-138 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 Gene3D G3DSA:3.40.640.10 16 262 1.3E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.252 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-228 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 Gene3D G3DSA:3.90.1150.10 5 375 1.3E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 SUPERFAMILY SSF53383 5 391 4.12E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_12350 2b01887a56086238d6dfdc6fc4637245 404 Pfam PF00266 Aminotransferase class-V 5 368 1.6E-89 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_18915 97dc73b59574d32ea033362692ac7f1b 149 Pfam PF03625 Domain of unknown function DUF302 56 117 3.4E-21 T 11-10-2018 IPR005180 Domain of unknown function DUF302 AL538_18915 97dc73b59574d32ea033362692ac7f1b 149 SUPERFAMILY SSF103247 25 147 3.66E-35 T 11-10-2018 IPR035923 TT1751-like domain superfamily AL538_18915 97dc73b59574d32ea033362692ac7f1b 149 Gene3D G3DSA:3.30.310.70 23 145 7.3E-15 T 11-10-2018 IPR035923 TT1751-like domain superfamily AL538_26835 e0857908a8ec6e9c6fb7ed9a46a10171 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 64 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_26835 e0857908a8ec6e9c6fb7ed9a46a10171 398 Gene3D G3DSA:1.20.1720.10 11 387 2.1E-79 T 11-10-2018 AL538_26835 e0857908a8ec6e9c6fb7ed9a46a10171 398 SUPERFAMILY SSF103473 7 387 1.96E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_26835 e0857908a8ec6e9c6fb7ed9a46a10171 398 Pfam PF07690 Major Facilitator Superfamily 22 354 1.0E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 Pfam PF16315 Domain of unknown function (DUF4955) 422 556 2.5E-22 T 11-10-2018 IPR032532 Domain of unknown function DUF4955 AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 Gene3D G3DSA:2.160.20.10 254 555 4.6E-9 T 11-10-2018 IPR012334 Pectin lyase fold AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 Gene3D G3DSA:2.160.20.10 85 229 1.1E-12 T 11-10-2018 IPR012334 Pectin lyase fold AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 SUPERFAMILY SSF51126 75 493 1.21E-11 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 SUPERFAMILY SSF51126 84 182 1.37E-11 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL538_19650 eb8872c7358c0b52ddf4bb97677ecb39 581 Pfam PF12708 Pectate lyase superfamily protein 86 183 1.7E-10 T 11-10-2018 IPR024535 Pectate lyase superfamily protein AL538_21980 ea94f01e3965b6d2294157264d018c41 107 Pfam PF11742 Protein of unknown function (DUF3302) 5 76 3.9E-34 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL538_21980 ea94f01e3965b6d2294157264d018c41 107 PIRSF PIRSF028770 3 105 4.9E-38 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 AL538_04985 2da611329fdf186513f238f187e05382 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.2E-22 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 11-10-2018 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_02115 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 11-10-2018 AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 SMART SM00530 31 86 2.6E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF01381 Helix-turn-helix 32 84 2.7E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:1.10.260.40 26 93 7.2E-16 T 11-10-2018 AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF51182 97 204 1.34E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 SUPERFAMILY SSF47413 26 90 4.29E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 Gene3D G3DSA:2.60.120.10 94 205 2.3E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_23875 5325c4c04ca8c2678a54d9fcc72e161f 207 Pfam PF07883 Cupin domain 147 204 8.5E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AL538_16980 d2b2d03bce08bca54cbe5a3d4e521055 167 PIRSF PIRSF028301 1 167 7.3E-57 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_16980 d2b2d03bce08bca54cbe5a3d4e521055 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 1.8E-56 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_16980 d2b2d03bce08bca54cbe5a3d4e521055 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 160 2.1E-53 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 PIRSF PIRSF004532 1 331 4.7E-133 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 Gene3D G3DSA:3.40.190.90 109 276 1.3E-123 T 11-10-2018 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 4.3E-127 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 SUPERFAMILY SSF56655 1 324 2.87E-105 T 11-10-2018 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 Gene3D G3DSA:3.30.540.10 7 319 1.3E-123 T 11-10-2018 AL538_10770 8f3f4e3a0457b3c228cab7d002b48637 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 1.2E-164 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 19 222 1.1E-47 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 Gene3D G3DSA:3.30.70.260 136 207 1.2E-58 T 11-10-2018 AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 60 223 2.1E-42 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 SUPERFAMILY SSF100950 15 156 1.32E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 Gene3D G3DSA:3.40.50.1360 16 223 1.2E-58 T 11-10-2018 AL538_17710 8d15d52c2c2296bc3865919eef04e2fb 231 SUPERFAMILY SSF75445 138 209 9.94E-19 T 11-10-2018 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 PIRSF PIRSF001434 1 385 8.1E-131 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 SUPERFAMILY SSF53383 9 381 7.97E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 2.2E-136 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 Gene3D G3DSA:3.90.1150.10 249 386 4.2E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 2.5E-202 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 AL538_07860 e003bd0fbeadd3ddf51e2ddf1aa2e5de 386 Gene3D G3DSA:3.40.640.10 3 248 9.3E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_06960 0509fe2a3459fe6c72ef0772d83be169 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 41.53 T 11-10-2018 IPR023483 Uncharacterised protein family SprT AL538_06960 0509fe2a3459fe6c72ef0772d83be169 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 2.6E-10 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain AL538_06960 0509fe2a3459fe6c72ef0772d83be169 165 SMART SM00731 11 160 8.5E-55 T 11-10-2018 IPR006640 SprT-like AL538_06960 0509fe2a3459fe6c72ef0772d83be169 165 Pfam PF10263 SprT-like family 15 114 4.9E-20 T 11-10-2018 IPR006640 SprT-like AL538_01755 87c26a7a5daae983d6c2f1359670906e 224 Gene3D G3DSA:2.60.120.1460 24 224 7.1E-18 T 11-10-2018 AL538_01755 87c26a7a5daae983d6c2f1359670906e 224 SUPERFAMILY SSF51206 30 142 2.23E-20 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_01755 87c26a7a5daae983d6c2f1359670906e 224 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 4.3E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_22605 f0e5f26f2552f06f3919d9da8205c319 222 Pfam PF08239 Bacterial SH3 domain 74 128 2.8E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL538_22605 f0e5f26f2552f06f3919d9da8205c319 222 Gene3D G3DSA:2.30.30.40 56 131 1.4E-5 T 11-10-2018 AL538_11475 93ef5591d223bae60005b5c4fae0a19d 440 Gene3D G3DSA:1.20.1600.10 23 440 1.7E-118 T 11-10-2018 AL538_11475 93ef5591d223bae60005b5c4fae0a19d 440 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 435 1.4E-107 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AL538_11475 93ef5591d223bae60005b5c4fae0a19d 440 Pfam PF02321 Outer membrane efflux protein 25 214 1.5E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_11475 93ef5591d223bae60005b5c4fae0a19d 440 Pfam PF02321 Outer membrane efflux protein 238 422 1.3E-32 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_11475 93ef5591d223bae60005b5c4fae0a19d 440 SUPERFAMILY SSF56954 1 428 9.29E-91 T 11-10-2018 AL538_09405 3a84a31464150d35741a90b0ca68a09f 87 SUPERFAMILY SSF160272 1 86 1.44E-28 T 11-10-2018 IPR036692 Shew3726-like superfamily AL538_09405 3a84a31464150d35741a90b0ca68a09f 87 Gene3D G3DSA:3.30.160.140 1 87 2.3E-32 T 11-10-2018 IPR036692 Shew3726-like superfamily AL538_09405 3a84a31464150d35741a90b0ca68a09f 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.8E-24 T 11-10-2018 IPR009962 Protein of unknown function DUF1488 AL538_26330 1ff655c4b27349e39bbdb1440fb7ab71 111 SUPERFAMILY SSF47413 6 61 1.18E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_26330 1ff655c4b27349e39bbdb1440fb7ab71 111 Pfam PF13560 Helix-turn-helix domain 10 62 1.1E-10 T 11-10-2018 AL538_26330 1ff655c4b27349e39bbdb1440fb7ab71 111 SMART SM00530 9 64 1.4E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_26330 1ff655c4b27349e39bbdb1440fb7ab71 111 Gene3D G3DSA:1.10.260.40 4 62 8.0E-11 T 11-10-2018 AL538_05195 9296ce514049263c616dcea47dd29cdb 300 Pfam PF04261 Dyp-type peroxidase family 5 293 8.8E-89 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL538_05195 9296ce514049263c616dcea47dd29cdb 300 SUPERFAMILY SSF54909 1 297 2.32E-93 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_05195 9296ce514049263c616dcea47dd29cdb 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 2.7E-83 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AL538_23825 43f56aa1c3c23b2a2aa0227bf04a8990 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.1E-30 T 11-10-2018 IPR032036 Protein of unknown function DUF5062 AL538_23825 43f56aa1c3c23b2a2aa0227bf04a8990 86 Gene3D G3DSA:1.20.120.1930 1 86 7.2E-39 T 11-10-2018 AL538_21420 e0c0947894e12408923bc8078713b403 296 Pfam PF03466 LysR substrate binding domain 89 295 6.2E-27 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21420 e0c0947894e12408923bc8078713b403 296 SUPERFAMILY SSF46785 3 84 3.44E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21420 e0c0947894e12408923bc8078713b403 296 SUPERFAMILY SSF53850 91 296 6.33E-28 T 11-10-2018 AL538_21420 e0c0947894e12408923bc8078713b403 296 Gene3D G3DSA:1.10.10.10 5 88 2.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21420 e0c0947894e12408923bc8078713b403 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21420 e0c0947894e12408923bc8078713b403 296 Gene3D G3DSA:3.40.190.10 102 291 1.6E-35 T 11-10-2018 AL538_21420 e0c0947894e12408923bc8078713b403 296 Gene3D G3DSA:3.40.190.10 163 264 1.6E-35 T 11-10-2018 AL538_19545 d51ee11cff12668b979264e39fe32984 408 Gene3D G3DSA:1.10.10.60 345 403 1.2E-7 T 11-10-2018 AL538_19545 d51ee11cff12668b979264e39fe32984 408 Pfam PF02954 Bacterial regulatory protein, Fis family 360 398 1.5E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AL538_19545 d51ee11cff12668b979264e39fe32984 408 SUPERFAMILY SSF52540 144 334 4.3E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_19545 d51ee11cff12668b979264e39fe32984 408 Gene3D G3DSA:1.10.8.60 277 344 2.4E-10 T 11-10-2018 AL538_19545 d51ee11cff12668b979264e39fe32984 408 SUPERFAMILY SSF52172 5 187 1.99E-38 T 11-10-2018 IPR011006 CheY-like superfamily AL538_19545 d51ee11cff12668b979264e39fe32984 408 Gene3D G3DSA:3.40.50.300 143 276 4.2E-7 T 11-10-2018 AL538_19545 d51ee11cff12668b979264e39fe32984 408 Pfam PF00072 Response regulator receiver domain 5 114 9.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_19545 d51ee11cff12668b979264e39fe32984 408 Gene3D G3DSA:3.40.50.2300 2 134 3.3E-34 T 11-10-2018 AL538_19545 d51ee11cff12668b979264e39fe32984 408 SUPERFAMILY SSF46689 349 401 4.08E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19545 d51ee11cff12668b979264e39fe32984 408 SMART SM00448 3 114 3.9E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 350 1.3E-41 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 Gene3D G3DSA:2.40.30.170 50 274 1.8E-47 T 11-10-2018 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 Gene3D G3DSA:2.40.420.20 275 348 1.8E-47 T 11-10-2018 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 SUPERFAMILY SSF111369 50 268 3.01E-27 T 11-10-2018 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 262 1.0E-7 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 Gene3D G3DSA:2.40.50.100 61 190 1.8E-47 T 11-10-2018 AL538_03795 6ed7dd984bdec6d21fbbdafda92275db 369 Gene3D G3DSA:1.10.287.470 96 155 1.8E-47 T 11-10-2018 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.9E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 5.0E-234 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 7.7E-52 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 SUPERFAMILY SSF48179 177 472 6.8E-126 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 7.4E-126 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 Gene3D G3DSA:1.20.5.320 435 482 3.8E-25 T 11-10-2018 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 PIRSF PIRSF000109 1 477 1.6E-241 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 SUPERFAMILY SSF51735 4 174 4.04E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 SMART SM01350 179 469 1.0E-213 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-102 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AL538_01185 b04490e27a8b03b91dcf10e7188fff18 482 Gene3D G3DSA:3.40.50.720 1 180 6.5E-57 T 11-10-2018 AL538_11345 0b13f3b550de906e774ef74265fd6580 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 1.1E-20 T 11-10-2018 AL538_11345 0b13f3b550de906e774ef74265fd6580 582 SMART SM00563 75 199 3.2E-4 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_11345 0b13f3b550de906e774ef74265fd6580 582 SUPERFAMILY SSF55729 318 453 2.75E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_11345 0b13f3b550de906e774ef74265fd6580 582 Gene3D G3DSA:3.40.630.30 312 456 3.2E-6 T 11-10-2018 AL538_11345 0b13f3b550de906e774ef74265fd6580 582 SUPERFAMILY SSF69593 48 244 8.24E-9 T 11-10-2018 AL538_23865 f8202833e1fb416b9a25f6a4506fe31c 126 SUPERFAMILY SSF51230 3 125 1.57E-45 T 11-10-2018 IPR011053 Single hybrid motif AL538_23865 f8202833e1fb416b9a25f6a4506fe31c 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.293 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL538_23865 f8202833e1fb416b9a25f6a4506fe31c 126 Gene3D G3DSA:2.40.50.100 1 126 9.0E-51 T 11-10-2018 AL538_23865 f8202833e1fb416b9a25f6a4506fe31c 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 1.2E-50 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AL538_23865 f8202833e1fb416b9a25f6a4506fe31c 126 Pfam PF01597 Glycine cleavage H-protein 5 125 5.4E-50 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AL538_06100 f544526c493b1e36262d31447c6b5d35 152 SUPERFAMILY SSF55729 2 147 1.39E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_06100 f544526c493b1e36262d31447c6b5d35 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 5.5E-39 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AL538_06100 f544526c493b1e36262d31447c6b5d35 152 Gene3D G3DSA:3.40.630.30 3 149 5.8E-42 T 11-10-2018 AL538_06100 f544526c493b1e36262d31447c6b5d35 152 Pfam PF00583 Acetyltransferase (GNAT) family 17 121 1.5E-17 T 11-10-2018 IPR000182 GNAT domain AL538_08280 666505e1e119d876faebb8fd493e5142 125 PIRSF PIRSF000179 6 125 2.7E-56 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL538_08280 666505e1e119d876faebb8fd493e5142 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.592 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL538_08280 666505e1e119d876faebb8fd493e5142 125 SUPERFAMILY SSF81343 7 125 5.23E-50 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_08280 666505e1e119d876faebb8fd493e5142 125 Pfam PF02313 Fumarate reductase subunit D 11 123 2.5E-44 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL538_08280 666505e1e119d876faebb8fd493e5142 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 4.0E-48 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 AL538_08280 666505e1e119d876faebb8fd493e5142 125 Gene3D G3DSA:1.20.1300.10 6 125 3.4E-44 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_06850 96f48f5e312023bdefe791e43979f35a 170 Pfam PF04073 Aminoacyl-tRNA editing domain 40 159 4.0E-31 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL538_06850 96f48f5e312023bdefe791e43979f35a 170 SUPERFAMILY SSF55826 18 169 1.96E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_06850 96f48f5e312023bdefe791e43979f35a 170 Gene3D G3DSA:3.90.960.10 13 170 9.8E-43 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_26155 f66a7a5864853c67639e50adfdf6dbe4 390 Pfam PF07690 Major Facilitator Superfamily 9 244 2.2E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_26155 f66a7a5864853c67639e50adfdf6dbe4 390 Gene3D G3DSA:1.20.1250.20 1 383 1.6E-37 T 11-10-2018 AL538_26155 f66a7a5864853c67639e50adfdf6dbe4 390 SUPERFAMILY SSF103473 2 379 5.1E-40 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_13710 763a729539efe69feef2982c739e4c0b 180 SUPERFAMILY SSF82808 66 179 6.54E-50 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AL538_13710 763a729539efe69feef2982c739e4c0b 180 SUPERFAMILY SSF47598 1 35 8.89E-14 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AL538_13710 763a729539efe69feef2982c739e4c0b 180 Gene3D G3DSA:1.20.1380.10 65 180 7.9E-49 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 AL538_13710 763a729539efe69feef2982c739e4c0b 180 Gene3D G3DSA:1.10.1220.10 1 41 1.0E-23 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AL538_13710 763a729539efe69feef2982c739e4c0b 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 3.0E-47 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 AL538_13710 763a729539efe69feef2982c739e4c0b 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.826 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL538_13710 763a729539efe69feef2982c739e4c0b 180 PIRSF PIRSF019401 1 180 4.0E-54 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 AL538_13710 763a729539efe69feef2982c739e4c0b 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-24 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal AL538_24740 3af90897305bb8b3da2467c7d368d365 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_24740 3af90897305bb8b3da2467c7d368d365 171 Pfam PF00293 NUDIX domain 33 147 1.1E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_24740 3af90897305bb8b3da2467c7d368d365 171 Gene3D G3DSA:3.90.79.10 1 167 1.1E-47 T 11-10-2018 AL538_24740 3af90897305bb8b3da2467c7d368d365 171 SUPERFAMILY SSF55811 3 169 5.42E-45 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_23300 46245b5eb29c1d9d51df61587302b342 411 SUPERFAMILY SSF69304 135 318 1.83E-11 T 11-10-2018 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Gene3D G3DSA:3.30.2130.30 1 174 6.1E-33 T 11-10-2018 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 SMART SM00981 75 165 7.2E-25 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Pfam PF02926 THUMP domain 56 158 8.5E-23 T 11-10-2018 IPR004114 THUMP domain GO:0003723 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 SUPERFAMILY SSF143437 1 173 8.37E-47 T 11-10-2018 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 SUPERFAMILY SSF52821 402 481 3.14E-12 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Gene3D G3DSA:3.40.50.620 175 381 1.3E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 2.1E-42 T 11-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.4E-111 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Gene3D G3DSA:3.40.250.10 382 482 2.2E-11 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 SUPERFAMILY SSF52402 174 372 4.41E-42 T 11-10-2018 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.2E-72 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 AL538_12910 12052d3a236ac69c3c9f33a0144988be 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 223.915 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 SUPERFAMILY SSF53254 1 144 1.12E-22 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 SMART SM00855 2 116 2.2E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 PIRSF PIRSF000709 1 88 1.5E-4 T 11-10-2018 AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 PIRSF PIRSF000709 92 147 44.0 T 11-10-2018 AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 Gene3D G3DSA:3.40.50.1240 1 154 3.3E-36 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 73 3.0E-10 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AL538_04895 36e2134ef8a234ca11de1ec8336a4709 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 3.6E-37 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 AL538_18000 f27aa70c17a69d2d54d7277204b76f2a 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 4.0E-25 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SUPERFAMILY SSF50249 567 649 6.56E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_25495 6ad7313633455e01475c27ef87b681ef 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 5.4E-183 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Gene3D G3DSA:2.40.50.140 1 82 1.5E-26 T 11-10-2018 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Pfam PF08206 Ribonuclease B OB domain 24 78 2.1E-16 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SUPERFAMILY SSF50249 8 80 3.83E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.309 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Pfam PF00773 RNB domain 193 521 1.2E-83 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Pfam PF00575 S1 RNA binding domain 564 646 5.0E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SMART SM00357 23 79 1.6E-8 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Gene3D G3DSA:2.40.50.640 83 157 9.6E-30 T 11-10-2018 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SMART SM00316 566 650 6.3E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 Gene3D G3DSA:2.40.50.140 565 651 2.0E-33 T 11-10-2018 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SMART SM00955 193 523 2.0E-113 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SUPERFAMILY SSF50249 186 563 7.2E-109 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_25495 6ad7313633455e01475c27ef87b681ef 667 SUPERFAMILY SSF50249 84 173 6.17E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_25495 6ad7313633455e01475c27ef87b681ef 667 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 Pfam PF03466 LysR substrate binding domain 91 287 8.6E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 SUPERFAMILY SSF46785 7 92 9.94E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 Gene3D G3DSA:1.10.10.10 7 94 7.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 Gene3D G3DSA:3.40.190.290 95 289 2.4E-33 T 11-10-2018 AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 SUPERFAMILY SSF53850 91 288 1.13E-28 T 11-10-2018 AL538_19340 ac7da9989f47707dbead8e0102ab9d5a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 7.6E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17305 e99b28bc5051e04b81fb1a7dae78b1c4 750 SUPERFAMILY SSF49785 607 708 1.19E-17 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_17305 e99b28bc5051e04b81fb1a7dae78b1c4 750 Gene3D G3DSA:2.60.120.260 588 731 9.6E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_17305 e99b28bc5051e04b81fb1a7dae78b1c4 750 SUPERFAMILY SSF55486 171 486 4.25E-41 T 11-10-2018 AL538_17305 e99b28bc5051e04b81fb1a7dae78b1c4 750 Pfam PF01483 Proprotein convertase P-domain 621 705 1.1E-19 T 11-10-2018 IPR002884 P domain GO:0004252|GO:0006508 AL538_18860 f25c37cb216559164a82b2e608364df7 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 24.573 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AL538_18860 f25c37cb216559164a82b2e608364df7 94 SUPERFAMILY SSF51182 3 94 1.87E-32 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_18860 f25c37cb216559164a82b2e608364df7 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 2.0E-32 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 AL538_18860 f25c37cb216559164a82b2e608364df7 94 Gene3D G3DSA:2.60.120.10 1 94 3.5E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_11380 4d96d503e9bdaa50b8268565b594b610 147 Pfam PF09424 Yqey-like protein 5 146 1.2E-57 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AL538_11380 4d96d503e9bdaa50b8268565b594b610 147 Gene3D G3DSA:1.10.1510.10 1 90 7.2E-28 T 11-10-2018 AL538_11380 4d96d503e9bdaa50b8268565b594b610 147 SUPERFAMILY SSF89095 1 146 1.52E-44 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AL538_11380 4d96d503e9bdaa50b8268565b594b610 147 Gene3D G3DSA:1.10.10.410 91 147 4.6E-20 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 SUPERFAMILY SSF48403 461 714 4.42E-18 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 SMART SM00248 648 677 280.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 SMART SM00248 457 486 890.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 SMART SM00248 684 714 63.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 SMART SM00248 537 566 0.5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 Gene3D G3DSA:1.25.40.20 455 606 1.3E-12 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL538_12570 b50f00420f5675660b099ab5f8958e3a 751 Gene3D G3DSA:1.25.40.960 655 713 5.5E-8 T 11-10-2018 AL538_21185 55bab65d98766ea5603917da10d9093e 160 Pfam PF00578 AhpC/TSA family 27 141 2.5E-19 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_21185 55bab65d98766ea5603917da10d9093e 160 Gene3D G3DSA:3.40.30.10 19 160 4.0E-35 T 11-10-2018 AL538_21185 55bab65d98766ea5603917da10d9093e 160 SUPERFAMILY SSF52833 25 157 4.73E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 Gene3D G3DSA:3.30.2080.10 383 913 6.7E-199 T 11-10-2018 AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 Gene3D G3DSA:1.20.1610.10 579 785 6.7E-199 T 11-10-2018 AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 5.3E-98 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 Gene3D G3DSA:1.20.1050.60 463 578 6.7E-199 T 11-10-2018 AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.3E-123 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 SUPERFAMILY SSF48208 353 904 1.43E-7 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_17760 b66fb99ffa25f6cf25f717f80d8f3aea 943 Gene3D G3DSA:2.70.98.10 87 462 6.7E-199 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_23370 5a3e0f58baecfac53cff61a439ef353e 136 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 136 7.4E-39 T 11-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL538_23370 5a3e0f58baecfac53cff61a439ef353e 136 Pfam PF04965 Gene 25-like lysozyme 28 115 4.0E-18 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL538_23370 5a3e0f58baecfac53cff61a439ef353e 136 Gene3D G3DSA:3.10.450.40 6 116 1.1E-10 T 11-10-2018 AL538_23370 5a3e0f58baecfac53cff61a439ef353e 136 SUPERFAMILY SSF160719 28 131 1.7E-20 T 11-10-2018 AL538_21005 37ffb7ac04fe3ecf871473f714cff6db 172 Pfam PF00293 NUDIX domain 23 145 3.3E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_21005 37ffb7ac04fe3ecf871473f714cff6db 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_21005 37ffb7ac04fe3ecf871473f714cff6db 172 SUPERFAMILY SSF55811 9 142 2.03E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_21005 37ffb7ac04fe3ecf871473f714cff6db 172 Gene3D G3DSA:3.90.79.10 13 151 4.3E-26 T 11-10-2018 AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 Gene3D G3DSA:3.40.50.300 8 228 1.0E-59 T 11-10-2018 AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 SMART SM00382 46 189 1.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 2.9E-19 T 11-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.8E-22 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 SUPERFAMILY SSF52540 18 294 4.86E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24735 11d22fbafdeeedb891e7e8ee1007c6ed 553 Gene3D G3DSA:1.10.8.300 229 301 2.4E-25 T 11-10-2018 AL538_25640 a6f65b05f4b02e8f803c1d6cbf168633 328 Gene3D G3DSA:3.40.50.300 2 197 1.0E-44 T 11-10-2018 AL538_25640 a6f65b05f4b02e8f803c1d6cbf168633 328 SUPERFAMILY SSF52540 4 170 2.61E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25640 a6f65b05f4b02e8f803c1d6cbf168633 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 177 3.3E-41 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 SMART SM00422 2 70 1.5E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 Gene3D G3DSA:1.10.1660.10 1 105 4.0E-24 T 11-10-2018 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.4E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.4E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.4E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 SUPERFAMILY SSF53335 135 356 3.07E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 SUPERFAMILY SSF46955 2 102 4.76E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.1E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 Pfam PF13649 Methyltransferase domain 187 279 1.6E-15 T 11-10-2018 AL538_26720 ab6a8c94dff5ecdd8ea5b6af16dca927 387 Gene3D G3DSA:3.40.50.150 141 386 1.7E-54 T 11-10-2018 AL538_26020 17243be82145a75381cd922137eda5e8 274 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 232 2.1E-21 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB AL538_26020 17243be82145a75381cd922137eda5e8 274 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 121 234 1.1E-13 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL538_16050 956405335ea591f15c7ffd98e5712ba8 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_16050 956405335ea591f15c7ffd98e5712ba8 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 9.8E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_16050 956405335ea591f15c7ffd98e5712ba8 230 SUPERFAMILY SSF55120 2 199 4.64E-48 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_16050 956405335ea591f15c7ffd98e5712ba8 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.7E-107 T 11-10-2018 IPR006508 Pseudouridine synthase, RluA-like AL538_16050 956405335ea591f15c7ffd98e5712ba8 230 Gene3D G3DSA:3.30.2350.10 1 195 1.4E-48 T 11-10-2018 AL538_03565 8945a9a546e47c2e08058827f4daa17a 342 SUPERFAMILY SSF51726 3 338 2.22E-68 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_03565 8945a9a546e47c2e08058827f4daa17a 342 PIRSF PIRSF005632 1 342 4.2E-194 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL538_03565 8945a9a546e47c2e08058827f4daa17a 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 328 1.2E-35 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AL538_03565 8945a9a546e47c2e08058827f4daa17a 342 Gene3D G3DSA:3.20.20.210 1 342 5.3E-134 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 Gene3D G3DSA:3.20.20.210 1 355 1.9E-159 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 4.9E-140 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.9E-142 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.803 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 SUPERFAMILY SSF51726 1 354 3.66E-123 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AL538_08625 a328c4300e569be449fccdc4f4bf44cd 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AL538_20800 2bd32015fecf29faa7ac604efece209a 214 Gene3D G3DSA:1.10.357.10 8 214 6.0E-34 T 11-10-2018 AL538_20800 2bd32015fecf29faa7ac604efece209a 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 68 8.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_20800 2bd32015fecf29faa7ac604efece209a 214 SUPERFAMILY SSF46689 19 76 2.94E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_20800 2bd32015fecf29faa7ac604efece209a 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 67 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL538_20800 2bd32015fecf29faa7ac604efece209a 214 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 82 212 3.7E-10 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 AL538_20800 2bd32015fecf29faa7ac604efece209a 214 SUPERFAMILY SSF48498 81 213 8.34E-22 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_19215 22649be17b365e6d3e149be4ff1cced0 277 SMART SM00342 187 269 1.4E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19215 22649be17b365e6d3e149be4ff1cced0 277 Pfam PF12833 Helix-turn-helix domain 197 271 4.9E-9 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19215 22649be17b365e6d3e149be4ff1cced0 277 Gene3D G3DSA:1.10.10.60 168 276 2.9E-18 T 11-10-2018 AL538_19215 22649be17b365e6d3e149be4ff1cced0 277 SUPERFAMILY SSF46689 222 272 3.23E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19325 deaab7b0f5b8bcc856fbf82f53e221ae 422 Pfam PF02687 FtsX-like permease family 315 411 6.9E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_19325 deaab7b0f5b8bcc856fbf82f53e221ae 422 Pfam PF12704 MacB-like periplasmic core domain 23 249 3.6E-16 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SMART SM00448 456 569 5.4E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SUPERFAMILY SSF55874 268 438 1.24E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Gene3D G3DSA:3.40.50.2300 440 573 1.8E-40 T 11-10-2018 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SMART SM00387 326 437 8.1E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Pfam PF00072 Response regulator receiver domain 458 569 1.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Gene3D G3DSA:3.30.565.10 278 439 1.2E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SUPERFAMILY SSF52172 455 574 8.97E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 9.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 9.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 9.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 9.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SUPERFAMILY SSF47384 200 280 1.24E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Gene3D G3DSA:1.10.287.130 180 277 2.0E-27 T 11-10-2018 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 SMART SM00388 214 279 4.3E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_00795 4cf8c3e123bc298bca49a699a93d6a20 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 9.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_23550 cdb5abceee92c8c5c42fde9189647c04 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 451 1.3E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_23550 cdb5abceee92c8c5c42fde9189647c04 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 451 4.4E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_23550 cdb5abceee92c8c5c42fde9189647c04 453 SMART SM00267 295 452 3.8E-31 T 11-10-2018 IPR000160 GGDEF domain AL538_23550 cdb5abceee92c8c5c42fde9189647c04 453 Gene3D G3DSA:3.30.70.270 303 453 4.7E-39 T 11-10-2018 AL538_23550 cdb5abceee92c8c5c42fde9189647c04 453 SUPERFAMILY SSF55073 310 451 1.26E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_22970 6a44c1a4b0582aa0fe38f5c1fc4b8976 579 SUPERFAMILY SSF75011 63 507 8.5E-14 T 11-10-2018 AL538_22970 6a44c1a4b0582aa0fe38f5c1fc4b8976 579 Gene3D G3DSA:2.130.10.10 42 293 9.4E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_24520 cb8349ac81b8734d9e661eab7e4dc919 373 Pfam PF01594 AI-2E family transporter 20 343 3.7E-32 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL538_10910 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 11-10-2018 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 11-10-2018 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_10910 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL538_10910 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AL538_10910 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 75 167 6.2E-37 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_23320 4b956f75e4fbd98169bda9b104615039 172 SUPERFAMILY SSF141452 3 168 9.15E-39 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_23320 4b956f75e4fbd98169bda9b104615039 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 1.2E-29 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL538_23320 4b956f75e4fbd98169bda9b104615039 172 Gene3D G3DSA:2.30.110.20 2 172 2.4E-62 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_23320 4b956f75e4fbd98169bda9b104615039 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.0E-64 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL538_19965 85994436c716bdf8dcfa8205577b87f8 179 SUPERFAMILY SSF55797 41 176 2.35E-21 T 11-10-2018 IPR035940 CAP superfamily AL538_19965 85994436c716bdf8dcfa8205577b87f8 179 Pfam PF00188 Cysteine-rich secretory protein family 48 175 6.8E-20 T 11-10-2018 IPR014044 CAP domain AL538_19965 85994436c716bdf8dcfa8205577b87f8 179 Gene3D G3DSA:3.40.33.10 20 177 9.4E-44 T 11-10-2018 IPR035940 CAP superfamily AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 Gene3D G3DSA:3.40.50.2300 1 119 8.7E-25 T 11-10-2018 AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 SMART SM00862 140 211 2.7E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 2.8E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 SUPERFAMILY SSF52172 1 168 9.53E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 SUPERFAMILY SSF46894 117 212 4.42E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 Pfam PF00072 Response regulator receiver domain 4 110 7.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 Gene3D G3DSA:1.10.10.10 120 216 7.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25380 c3ae29bbafd36f3f93a5cdd2c099d62f 216 SMART SM00448 2 110 2.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_19710 48a3b19dd473d044eba6d9d494c37563 118 Pfam PF02656 Domain of unknown function (DUF202) 13 76 3.0E-13 T 11-10-2018 IPR003807 Domain of unknown function DUF202 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Pfam PF01706 FliG C-terminal domain 224 330 1.4E-23 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Gene3D G3DSA:1.10.220.30 202 335 1.4E-24 T 11-10-2018 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 SUPERFAMILY SSF48029 14 114 1.57E-16 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Gene3D G3DSA:1.10.220.30 96 199 2.1E-22 T 11-10-2018 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Pfam PF14841 FliG middle domain 123 196 4.5E-20 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Gene3D G3DSA:1.10.220.30 6 92 4.7E-17 T 11-10-2018 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 2.8E-28 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 Pfam PF14842 FliG N-terminal domain 12 109 6.0E-22 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL538_21390 92fe635ffd52ba5fa4b817fbdb1eeee3 339 SUPERFAMILY SSF48029 122 330 4.45E-53 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL538_22315 3a562c02be3305171f7006df539a764b 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_22315 3a562c02be3305171f7006df539a764b 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 4.3E-35 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_22315 3a562c02be3305171f7006df539a764b 118 Gene3D G3DSA:1.10.3830.10 3 118 1.5E-39 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 Gene3D G3DSA:3.30.470.10 10 127 2.6E-106 T 11-10-2018 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 SUPERFAMILY SSF56752 7 307 1.18E-102 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 Gene3D G3DSA:3.20.10.10 138 289 2.6E-106 T 11-10-2018 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 Pfam PF01063 Amino-transferase class IV 36 268 3.1E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AL538_09545 eefc5ca786e285ff88d0be4026d048d7 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.9E-142 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Gene3D G3DSA:3.40.50.300 196 374 1.5E-57 T 11-10-2018 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Gene3D G3DSA:3.30.450.20 82 187 5.9E-18 T 11-10-2018 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SMART SM00091 80 146 1.3E-5 T 11-10-2018 IPR000014 PAS domain AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Gene3D G3DSA:1.10.10.60 458 513 4.5E-25 T 11-10-2018 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SUPERFAMILY SSF52540 205 444 1.82E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Gene3D G3DSA:3.30.70.260 1 80 4.6E-26 T 11-10-2018 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SMART SM00382 225 368 3.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SUPERFAMILY SSF55785 81 168 8.19E-9 T 11-10-2018 IPR035965 PAS domain superfamily AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SUPERFAMILY SSF46689 461 512 8.96E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Gene3D G3DSA:1.10.8.60 375 441 7.3E-16 T 11-10-2018 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Pfam PF00158 Sigma-54 interaction domain 207 370 2.0E-57 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 Pfam PF00989 PAS fold 83 130 1.6E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AL538_02950 5c7296af5a158e383aa3119941def4ee 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.4E-28 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AL538_02950 5c7296af5a158e383aa3119941def4ee 514 SUPERFAMILY SSF55021 1 68 9.67E-7 T 11-10-2018 AL538_09010 aad1ecea464b8670c57e7a9c43276acd 194 Pfam PF01914 MarC family integral membrane protein 3 192 1.0E-53 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_09010 aad1ecea464b8670c57e7a9c43276acd 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 5.0E-30 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_03680 b8477bf792b9f3a454fb1b0cb600c1ab 548 Pfam PF02470 MlaD protein 43 134 3.5E-10 T 11-10-2018 IPR003399 Mce/MlaD AL538_03680 b8477bf792b9f3a454fb1b0cb600c1ab 548 Pfam PF02470 MlaD protein 287 391 1.3E-13 T 11-10-2018 IPR003399 Mce/MlaD AL538_03680 b8477bf792b9f3a454fb1b0cb600c1ab 548 Pfam PF02470 MlaD protein 159 221 2.5E-7 T 11-10-2018 IPR003399 Mce/MlaD AL538_15230 c223247451a2836ba80346532150c7e4 494 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 360 492 5.7E-49 T 11-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 AL538_26015 dc7848004c503870b3303ef74f3872f3 456 Pfam PF04972 BON domain 104 152 2.0E-6 T 11-10-2018 IPR007055 BON domain AL538_26015 dc7848004c503870b3303ef74f3872f3 456 Pfam PF00263 Bacterial type II and III secretion system protein 250 407 1.9E-40 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_26015 dc7848004c503870b3303ef74f3872f3 456 Pfam PF13629 Pilus formation protein N terminal region 34 99 1.3E-13 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AL538_24605 47536c22cb704157dc0f671be3ad8d1d 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 9.2E-150 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_24605 47536c22cb704157dc0f671be3ad8d1d 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 5.9E-147 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_24605 47536c22cb704157dc0f671be3ad8d1d 443 PIRSF PIRSF004539 1 441 4.2E-185 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_08885 4337fa40e29a5bd09a47830c7f5edb70 143 Pfam PF10980 Protein of unknown function (DUF2787) 16 141 1.9E-43 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_08885 4337fa40e29a5bd09a47830c7f5edb70 143 Gene3D G3DSA:3.10.450.430 1 143 2.7E-50 T 11-10-2018 AL538_23985 9e18c86bd2ef5a00924819a7428a01f7 382 SUPERFAMILY SSF56796 2 377 1.09E-97 T 11-10-2018 AL538_23985 9e18c86bd2ef5a00924819a7428a01f7 382 Gene3D G3DSA:1.20.1090.10 181 380 1.0E-32 T 11-10-2018 AL538_23985 9e18c86bd2ef5a00924819a7428a01f7 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 1.2E-81 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_23985 9e18c86bd2ef5a00924819a7428a01f7 382 Gene3D G3DSA:3.40.50.1970 1 180 8.7E-50 T 11-10-2018 AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 SUPERFAMILY SSF161098 282 535 8.39E-39 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 SUPERFAMILY SSF161098 7 257 7.19E-44 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 Gene3D G3DSA:1.10.3720.10 286 540 6.0E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 252 2.4E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 534 7.4E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_06355 7e9f3c9b8d8b402335a5c8a80ba70bf5 541 Gene3D G3DSA:1.10.3720.10 10 267 3.3E-53 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 6.2E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 6.2E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 6.2E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 6.2E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 Gene3D G3DSA:1.10.760.10 59 136 1.7E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 SUPERFAMILY SSF46626 60 134 2.19E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_09860 63aadf07ca87bb563810fa28fc144abd 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 2.6E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Gene3D G3DSA:3.30.499.10 399 526 1.1E-149 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 ProSitePatterns PS01244 Aconitase family signature 2. 758 771 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Gene3D G3DSA:3.40.1060.10 382 678 1.1E-149 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Pfam PF00330 Aconitase family (aconitate hydratase) 469 815 3.1E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Gene3D G3DSA:3.20.19.10 162 358 5.9E-75 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Gene3D G3DSA:1.25.40.310 1 160 4.2E-71 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Pfam PF11791 Aconitate B N-terminal domain 4 156 8.8E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 SUPERFAMILY SSF74778 2 159 2.48E-67 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 SUPERFAMILY SSF52016 162 369 2.08E-66 T 11-10-2018 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 SUPERFAMILY SSF53732 377 857 2.35E-148 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 379 3.3E-96 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 Gene3D G3DSA:3.30.499.10 680 862 9.4E-73 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 ProSitePatterns PS00450 Aconitase family signature 1. 699 716 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 PIRSF PIRSF036687 1 856 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_06380 a0940a59b20b3f4c918725f172b6ae34 862 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 850 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AL538_19255 90c5a66e8e6ce38b4963f1a5e9086047 123 SUPERFAMILY SSF46785 1 77 8.68E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19255 90c5a66e8e6ce38b4963f1a5e9086047 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.6E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19255 90c5a66e8e6ce38b4963f1a5e9086047 123 SMART SM00345 14 73 1.5E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19255 90c5a66e8e6ce38b4963f1a5e9086047 123 Gene3D G3DSA:1.10.10.10 7 122 5.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01405 3b30eb8953791fbcb0f8339961c9c657 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 1.1E-134 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_01405 3b30eb8953791fbcb0f8339961c9c657 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 8.7E-170 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_19600 af27d7a230e80418570fa749c8ede26d 148 Pfam PF13673 Acetyltransferase (GNAT) domain 14 136 1.3E-31 T 11-10-2018 IPR000182 GNAT domain AL538_19600 af27d7a230e80418570fa749c8ede26d 148 Gene3D G3DSA:3.40.630.30 1 143 1.6E-21 T 11-10-2018 AL538_19600 af27d7a230e80418570fa749c8ede26d 148 SUPERFAMILY SSF55729 17 134 1.26E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 2.5E-73 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 Pfam PF11356 Type II secretion system protein C 37 177 9.9E-45 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 Gene3D G3DSA:2.30.30.830 111 178 7.5E-29 T 11-10-2018 AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 Gene3D G3DSA:2.30.42.10 203 307 3.9E-26 T 11-10-2018 AL538_10250 d618be4a9507a2dfafd42cb4ece05c9a 307 SUPERFAMILY SSF50156 211 307 3.02E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_18245 9771d5b73068dafe0ed481dbd57d890e 423 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 6.6E-12 T 11-10-2018 IPR014973 Protein of unknown function DUF1835 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 1.6E-41 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 Gene3D G3DSA:3.40.1010.10 49 166 9.2E-42 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 Gene3D G3DSA:3.30.950.10 167 295 4.7E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 9.6E-84 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_25220 ed016f6f786c6eda5488c4745531216e 301 SUPERFAMILY SSF53790 49 288 2.22E-66 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL538_20510 0d400834d379ed360d43ff624cb4a582 179 PIRSF PIRSF014995 8 179 4.3E-66 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 AL538_20510 0d400834d379ed360d43ff624cb4a582 179 Gene3D G3DSA:2.60.40.4070 92 149 1.0E-8 T 11-10-2018 AL538_20510 0d400834d379ed360d43ff624cb4a582 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 38 169 1.5E-45 T 11-10-2018 IPR014469 Protein of unknown function DUF2271 AL538_04745 28b0801b12063e2b73c64c1392796385 218 Pfam PF13309 HTH domain 156 213 8.6E-15 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain AL538_04745 28b0801b12063e2b73c64c1392796385 218 Pfam PF08348 YheO-like PAS domain 14 119 2.6E-32 T 11-10-2018 IPR013559 YheO-like AL538_04745 28b0801b12063e2b73c64c1392796385 218 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 114 2.0E-49 T 11-10-2018 IPR013559 YheO-like AL538_20985 f2edd3ee1fe66ac1ef13a3a1bf3f18b3 456 Pfam PF03313 Serine dehydratase alpha chain 189 447 4.1E-95 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AL538_20985 f2edd3ee1fe66ac1ef13a3a1bf3f18b3 456 Pfam PF03315 Serine dehydratase beta chain 3 152 6.0E-53 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL538_20985 f2edd3ee1fe66ac1ef13a3a1bf3f18b3 456 SUPERFAMILY SSF143548 16 154 7.06E-44 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL538_20985 f2edd3ee1fe66ac1ef13a3a1bf3f18b3 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 9.8E-200 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL538_20985 f2edd3ee1fe66ac1ef13a3a1bf3f18b3 456 Gene3D G3DSA:3.30.1330.90 10 157 4.4E-50 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL538_12120 9fb7441e741e7197a1e6a04346af25cc 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 9.6E-73 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL538_12120 9fb7441e741e7197a1e6a04346af25cc 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 2.2E-61 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AL538_12120 9fb7441e741e7197a1e6a04346af25cc 242 SUPERFAMILY SSF64438 3 241 3.85E-83 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL538_12120 9fb7441e741e7197a1e6a04346af25cc 242 Gene3D G3DSA:3.60.140.10 1 240 3.3E-88 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AL538_05710 968170d82014a3e1cd2c671dc02d239d 445 Pfam PF14344 Domain of unknown function (DUF4397) 31 154 3.4E-16 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AL538_05710 968170d82014a3e1cd2c671dc02d239d 445 Pfam PF14344 Domain of unknown function (DUF4397) 248 364 4.5E-19 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AL538_05710 968170d82014a3e1cd2c671dc02d239d 445 Pfam PF14344 Domain of unknown function (DUF4397) 139 224 1.1E-9 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 AL538_10900 b1ee386d7d97886f125f349426a80632 177 Gene3D G3DSA:3.90.930.12 83 177 2.5E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.585 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_10900 b1ee386d7d97886f125f349426a80632 177 SUPERFAMILY SSF56053 83 177 1.87E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 PIRSF PIRSF002162 1 177 1.0E-45 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_10900 b1ee386d7d97886f125f349426a80632 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_10900 b1ee386d7d97886f125f349426a80632 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_10900 b1ee386d7d97886f125f349426a80632 177 Gene3D G3DSA:3.90.930.12 1 82 6.6E-31 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-19 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 Pfam PF00347 Ribosomal protein L6 91 164 1.4E-18 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10900 b1ee386d7d97886f125f349426a80632 177 SUPERFAMILY SSF56053 1 82 1.09E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10900 b1ee386d7d97886f125f349426a80632 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.2E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_04875 51b23be719efba80f85950b6ee70c31d 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL538_04875 51b23be719efba80f85950b6ee70c31d 207 Pfam PF03458 UPF0126 domain 92 163 1.8E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.361 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 3.1E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Gene3D G3DSA:3.10.310.40 749 857 6.7E-33 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 SUPERFAMILY SSF55681 3 254 1.94E-108 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 SUPERFAMILY SSF101353 255 462 2.22E-60 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 SUPERFAMILY SSF55186 551 710 2.09E-53 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AL538_06680 70515e54e95a54d113f3de15046d6422 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Gene3D G3DSA:3.30.54.20 623 676 1.2E-51 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Gene3D G3DSA:2.40.30.130 463 551 4.8E-10 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 SUPERFAMILY SSF50447 453 551 3.5E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06680 70515e54e95a54d113f3de15046d6422 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 3.6E-225 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Gene3D G3DSA:3.30.980.10 562 696 1.2E-51 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Gene3D G3DSA:3.30.930.10 2 251 3.0E-120 T 11-10-2018 AL538_06680 70515e54e95a54d113f3de15046d6422 860 Pfam PF02272 DHHA1 domain 722 854 1.3E-27 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AL538_06680 70515e54e95a54d113f3de15046d6422 860 SMART SM00863 652 695 1.1E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AL538_06680 70515e54e95a54d113f3de15046d6422 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AL538_12665 24cba231e594660aa4e260e8c83596f5 618 SUPERFAMILY SSF52540 14 170 2.4E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12665 24cba231e594660aa4e260e8c83596f5 618 Gene3D G3DSA:3.40.50.300 12 186 9.4E-8 T 11-10-2018 AL538_05810 f05d7f50c7e99166073311e8a46dcfed 327 Pfam PF14057 GGGtGRT protein 7 324 9.2E-174 T 11-10-2018 IPR025964 GGGtGRT protein AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 Gene3D G3DSA:1.20.810.10 1 421 7.2E-150 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 SUPERFAMILY SSF81342 6 296 9.58E-93 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.2E-41 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 SUPERFAMILY SSF81648 297 412 1.42E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 PIRSF PIRSF038885 1 421 6.0E-153 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AL538_11550 8c98abd57bddc4276b4781ae1a607ffc 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.8E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AL538_14540 ce9a4409f24863d22bcd220d584dfd92 196 Gene3D G3DSA:3.40.50.10610 39 188 3.7E-43 T 11-10-2018 AL538_14540 ce9a4409f24863d22bcd220d584dfd92 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.5E-55 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AL538_14540 ce9a4409f24863d22bcd220d584dfd92 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.7E-74 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB AL538_01520 b8b57e380e4e2a93d1d8d91e90a1c897 296 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 230 6.0E-84 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AL538_01520 b8b57e380e4e2a93d1d8d91e90a1c897 296 Gene3D G3DSA:3.20.20.60 2 294 3.5E-91 T 11-10-2018 AL538_01520 b8b57e380e4e2a93d1d8d91e90a1c897 296 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 8 291 1.9E-142 T 11-10-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 AL538_01520 b8b57e380e4e2a93d1d8d91e90a1c897 296 PIRSF PIRSF015582 2 296 5.2E-79 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like AL538_01520 b8b57e380e4e2a93d1d8d91e90a1c897 296 SUPERFAMILY SSF51621 7 240 7.68E-61 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 Gene3D G3DSA:3.30.70.270 517 701 1.2E-44 T 11-10-2018 AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 SMART SM00267 521 698 5.2E-45 T 11-10-2018 IPR000160 GGDEF domain AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 SUPERFAMILY SSF55781 179 329 2.18E-7 T 11-10-2018 AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 Gene3D G3DSA:3.30.450.40 334 516 3.9E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 SUPERFAMILY SSF55781 341 511 1.09E-5 T 11-10-2018 AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 Gene3D G3DSA:3.30.450.40 174 333 7.0E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 698 1.2E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 SUPERFAMILY SSF55073 537 699 1.26E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_17265 36590e1a6762a7694df8e6e1077e9a34 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 693 1.2E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 Gene3D G3DSA:3.40.640.10 58 327 5.9E-171 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 SUPERFAMILY SSF53383 4 420 1.12E-137 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 49.106 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 Pfam PF00202 Aminotransferase class-III 24 418 7.9E-130 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 Gene3D G3DSA:3.90.1150.10 7 412 5.9E-171 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.1E-179 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AL538_15690 e6ef26aaadf7abbf02d2165d5f76fbae 425 PIRSF PIRSF000521 24 421 2.2E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 2.6E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.0E-9 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 SUPERFAMILY SSF55120 1 256 1.87E-93 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 PIRSF PIRSF001430 1 251 3.0E-76 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 Gene3D G3DSA:3.30.70.660 105 242 9.8E-49 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.6E-73 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 Gene3D G3DSA:3.30.70.580 1 104 3.6E-39 T 11-10-2018 AL538_04830 65dacc9bb04eb98565b5fb6168db3642 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.404 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 SUPERFAMILY SSF52540 7 237 1.05E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 Gene3D G3DSA:3.40.50.300 282 529 1.1E-50 T 11-10-2018 AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF00005 ABC transporter 18 184 2.0E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 SUPERFAMILY SSF52540 334 517 1.43E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF00005 ABC transporter 336 466 1.7E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 Pfam PF12848 ABC transporter 224 309 1.4E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 Gene3D G3DSA:3.40.50.300 2 281 1.3E-56 T 11-10-2018 AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 SMART SM00382 26 238 9.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00625 0b180f9ffc89e5df9896d5baed485811 530 SMART SM00382 343 511 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_22020 472ec4d2ec0f7be8b8044e32326767f8 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.8E-18 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_22020 472ec4d2ec0f7be8b8044e32326767f8 99 SUPERFAMILY SSF52794 2 94 2.96E-33 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_22020 472ec4d2ec0f7be8b8044e32326767f8 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 6.0E-32 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_22020 472ec4d2ec0f7be8b8044e32326767f8 99 Gene3D G3DSA:3.40.50.2300 1 98 1.3E-37 T 11-10-2018 AL538_07515 61d4b58063e236de532d82259a3cb701 407 Gene3D G3DSA:1.20.81.30 59 176 6.0E-31 T 11-10-2018 AL538_07515 61d4b58063e236de532d82259a3cb701 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 5.6E-30 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_07515 61d4b58063e236de532d82259a3cb701 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.0E-26 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_07515 61d4b58063e236de532d82259a3cb701 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 11-10-2018 IPR003004 GspF/PilC family AL538_07515 61d4b58063e236de532d82259a3cb701 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 11-10-2018 IPR003004 GspF/PilC family AL538_07515 61d4b58063e236de532d82259a3cb701 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 11-10-2018 IPR003004 GspF/PilC family AL538_07515 61d4b58063e236de532d82259a3cb701 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 11-10-2018 IPR003004 GspF/PilC family AL538_07515 61d4b58063e236de532d82259a3cb701 407 Gene3D G3DSA:1.20.81.30 257 370 1.4E-28 T 11-10-2018 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.5E-139 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 Gene3D G3DSA:2.30.42.10 227 311 9.3E-22 T 11-10-2018 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 SMART SM00228 212 281 2.1E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 SMART SM00228 115 186 1.1 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 Pfam PF13180 PDZ domain 228 288 4.7E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 SUPERFAMILY SSF50156 209 294 1.1E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 Pfam PF02163 Peptidase family M50 11 440 2.4E-87 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 Gene3D G3DSA:2.30.42.10 126 221 1.4E-32 T 11-10-2018 AL538_05440 a082e4d8cd8d26f92bc2bcd0b6150696 452 SUPERFAMILY SSF50156 89 184 8.28E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_03045 edfeda531451db6df52867286e0e9f94 463 SUPERFAMILY SSF46785 1 68 6.8E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03045 edfeda531451db6df52867286e0e9f94 463 SMART SM00345 7 66 3.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03045 edfeda531451db6df52867286e0e9f94 463 Gene3D G3DSA:3.40.640.10 138 357 2.6E-99 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_03045 edfeda531451db6df52867286e0e9f94 463 Gene3D G3DSA:1.10.10.10 1 68 4.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03045 edfeda531451db6df52867286e0e9f94 463 SUPERFAMILY SSF53383 90 462 2.86E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_03045 edfeda531451db6df52867286e0e9f94 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.4E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03045 edfeda531451db6df52867286e0e9f94 463 Pfam PF00155 Aminotransferase class I and II 143 444 1.1E-34 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_03045 edfeda531451db6df52867286e0e9f94 463 Gene3D G3DSA:3.90.1150.10 98 462 2.6E-99 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.20.20.120 128 433 7.6E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.1E-205 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF03952 Enolase, N-terminal domain 4 134 1.8E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01192 143 431 3.7E-212 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 Gene3D G3DSA:3.30.390.10 1 127 3.3E-55 T 11-10-2018 IPR029017 Enolase-like, N-terminal AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PIRSF PIRSF001400 1 431 2.1E-191 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF54826 3 138 1.79E-56 T 11-10-2018 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 SUPERFAMILY SSF51604 143 428 1.26E-125 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 Hamap MF_00318 Enolase [eno]. 2 417 44.327 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 7.6E-136 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 SMART SM01193 4 134 1.3E-92 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_06745 2e07244f2587fc9dfe1135f3de529b84 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 Gene3D G3DSA:3.30.70.920 55 137 2.0E-19 T 11-10-2018 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 SUPERFAMILY SSF54909 63 145 4.69E-16 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 3.0E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.2E-17 T 11-10-2018 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 SUPERFAMILY SSF46785 1 60 3.03E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 SMART SM00344 1 110 2.7E-34 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_18720 fe80a0c01d5a08998bafd12e8eb08010 146 Gene3D G3DSA:1.10.10.10 1 54 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SUPERFAMILY SSF55890 338 386 2.09E-8 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SUPERFAMILY SSF55874 428 542 1.09E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 335 382 4.6E-7 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Pfam PF00989 PAS fold 227 278 2.3E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Pfam PF17203 Single cache domain 3 47 173 2.3E-20 T 11-10-2018 IPR033463 Single cache domain 3 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Gene3D G3DSA:3.30.450.20 39 172 1.6E-41 T 11-10-2018 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SUPERFAMILY SSF55785 215 324 1.29E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Gene3D G3DSA:3.30.565.10 397 548 1.5E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SMART SM00091 221 289 3.0E-4 T 11-10-2018 IPR000014 PAS domain AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 544 3.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01555 b90347a3b6ccefd172582894fc56d358 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 2.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 2.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 2.6E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SMART SM00387 433 545 4.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_01555 b90347a3b6ccefd172582894fc56d358 551 Gene3D G3DSA:3.30.450.20 208 326 9.8E-15 T 11-10-2018 AL538_01555 b90347a3b6ccefd172582894fc56d358 551 SUPERFAMILY SSF103190 46 172 1.49E-33 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_24630 7abdc3383d74bd13d76305fd7a6b60d6 107 SUPERFAMILY SSF50022 1 106 2.24E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_24630 7abdc3383d74bd13d76305fd7a6b60d6 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.1E-39 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL538_24630 7abdc3383d74bd13d76305fd7a6b60d6 107 Gene3D G3DSA:2.102.10.10 1 107 2.6E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_24630 7abdc3383d74bd13d76305fd7a6b60d6 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 4.4E-34 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 SUPERFAMILY SSF47144 78 170 2.62E-25 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 Gene3D G3DSA:1.20.1280.20 80 171 3.0E-28 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.314 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.6E-40 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 Gene3D G3DSA:1.10.287.110 1 79 1.9E-22 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 Pfam PF00226 DnaJ domain 2 70 4.1E-7 T 11-10-2018 IPR001623 DnaJ domain AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 SUPERFAMILY SSF46565 1 72 7.85E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 SMART SM00271 1 66 4.3E-9 T 11-10-2018 IPR001623 DnaJ domain AL538_12365 ea8fa70f403d22722a3437dbfc867fd6 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.7E-19 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 Gene3D G3DSA:1.20.1440.90 302 387 1.1E-23 T 11-10-2018 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.944 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 SUPERFAMILY SSF51621 6 877 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 1.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_07840 1d335ef73de9b871cb53a9968777bb28 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.0E-288 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AL538_18420 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 SUPERFAMILY SSF51658 6 290 1.8E-57 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_18420 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 Gene3D G3DSA:3.20.20.150 1 290 1.7E-76 T 11-10-2018 AL538_18420 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 4 290 2.8E-127 T 11-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 AL538_18420 30ee0ed0c1b4aa9ec168a26a1fd495bd 297 Pfam PF01261 Xylose isomerase-like TIM barrel 32 245 8.6E-23 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL538_10780 c6145e586abaa39c6a20291570277d1a 175 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 4.0E-83 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL538_10780 c6145e586abaa39c6a20291570277d1a 175 SUPERFAMILY SSF89562 2 158 1.57E-47 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AL538_10780 c6145e586abaa39c6a20291570277d1a 175 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.911 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 AL538_10780 c6145e586abaa39c6a20291570277d1a 175 Gene3D G3DSA:3.50.30.40 1 161 9.5E-62 T 11-10-2018 AL538_10780 c6145e586abaa39c6a20291570277d1a 175 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.4E-68 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL538_10780 c6145e586abaa39c6a20291570277d1a 175 Pfam PF03737 Aldolase/RraA 6 152 9.4E-40 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 Pfam PF02416 mttA/Hcf106 family 4 32 8.7E-5 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 2.1E-32 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.204 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.8E-27 T 11-10-2018 AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.8E-27 T 11-10-2018 AL538_10110 203c7fcfab7c101eca34d0c0f1c31ce6 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.8E-27 T 11-10-2018 AL538_17275 bfc20da3f85743fd871bfb45903bb424 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 7.4E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17275 bfc20da3f85743fd871bfb45903bb424 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 2.2E-99 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL538_17275 bfc20da3f85743fd871bfb45903bb424 287 SUPERFAMILY SSF161098 22 274 1.96E-42 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17275 bfc20da3f85743fd871bfb45903bb424 287 Gene3D G3DSA:1.10.3720.10 59 285 1.7E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_05100 07d3f73299794c692d82a713ff587786 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_05100 07d3f73299794c692d82a713ff587786 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 5.1E-194 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_05100 07d3f73299794c692d82a713ff587786 439 SMART SM00382 158 342 5.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05100 07d3f73299794c692d82a713ff587786 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 1.3E-174 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_05100 07d3f73299794c692d82a713ff587786 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.7E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AL538_05100 07d3f73299794c692d82a713ff587786 439 Gene3D G3DSA:3.40.50.12240 17 439 4.0E-156 T 11-10-2018 AL538_05100 07d3f73299794c692d82a713ff587786 439 SUPERFAMILY SSF52540 93 362 3.08E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23480 8811032452a1680a657bb3d3921edccc 603 Pfam PF04183 IucA / IucC family 161 374 7.1E-31 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 AL538_23480 8811032452a1680a657bb3d3921edccc 603 Gene3D G3DSA:1.10.510.40 364 545 4.6E-11 T 11-10-2018 AL538_23480 8811032452a1680a657bb3d3921edccc 603 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 549 2.7E-14 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain AL538_07755 d4050895ce35401ea2e81107b4936deb 366 Gene3D G3DSA:1.20.1090.10 177 366 2.2E-71 T 11-10-2018 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.666 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 PIRSF PIRSF001455 22 362 2.1E-107 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 Pfam PF01761 3-dehydroquinate synthase 72 329 4.9E-111 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 SUPERFAMILY SSF56796 4 360 1.83E-117 T 11-10-2018 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 Gene3D G3DSA:3.40.50.1970 1 176 2.7E-65 T 11-10-2018 AL538_07755 d4050895ce35401ea2e81107b4936deb 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 6.6E-120 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AL538_16675 c09cf9fbd8a55b3536248f94fec4d6fa 646 Gene3D G3DSA:3.60.21.70 316 568 1.5E-10 T 11-10-2018 IPR038607 PhoD-like superfamily AL538_16675 c09cf9fbd8a55b3536248f94fec4d6fa 646 SUPERFAMILY SSF56300 157 538 3.65E-12 T 11-10-2018 AL538_16675 c09cf9fbd8a55b3536248f94fec4d6fa 646 Pfam PF09423 PhoD-like phosphatase 319 560 1.8E-6 T 11-10-2018 IPR018946 Alkaline phosphatase D-related AL538_04760 235f4ed58edd4cb7a9006624a0ebab67 441 Pfam PF03222 Tryptophan/tyrosine permease family 40 340 5.2E-5 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL538_14730 e4ed818317e93b6259a276e77e43cf0e 221 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 32 217 4.4E-30 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL538_16935 59cba4c8e64d5a7b4709cf0860e16331 160 Gene3D G3DSA:2.60.40.4150 23 152 5.6E-27 T 11-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AL538_16935 59cba4c8e64d5a7b4709cf0860e16331 160 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 5 142 1.7E-30 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_16935 59cba4c8e64d5a7b4709cf0860e16331 160 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 141 5.0E-30 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_27095 dcfc675740f0b1a9e6ad2a6023f78d99 141 SUPERFAMILY SSF51306 5 136 1.36E-26 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AL538_27095 dcfc675740f0b1a9e6ad2a6023f78d99 141 Pfam PF00717 Peptidase S24-like 55 120 3.6E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AL538_27095 dcfc675740f0b1a9e6ad2a6023f78d99 141 Gene3D G3DSA:2.10.109.10 13 139 1.5E-14 T 11-10-2018 AL538_27640 e5a790107b7bf6fee9fc6f91489a423b 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.3E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 SMART SM00052 397 641 2.4E-12 T 11-10-2018 IPR001633 EAL domain AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 1.5E-20 T 11-10-2018 IPR000160 GGDEF domain AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 8.6E-27 T 11-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 SMART SM00267 216 386 8.2E-8 T 11-10-2018 IPR000160 GGDEF domain AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 SUPERFAMILY SSF55073 233 386 1.8E-18 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 SUPERFAMILY SSF141868 406 637 3.27E-36 T 11-10-2018 IPR035919 EAL domain superfamily AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 Pfam PF00563 EAL domain 406 637 1.9E-48 T 11-10-2018 IPR001633 EAL domain AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 Gene3D G3DSA:3.30.70.270 211 387 2.6E-22 T 11-10-2018 AL538_07555 8495f524ef09770d8eddc6ba8b40c9e2 669 Gene3D G3DSA:3.20.20.450 397 640 1.0E-36 T 11-10-2018 IPR035919 EAL domain superfamily AL538_04835 f80b6b1154dbd53187869486bf5769bb 1573 Gene3D G3DSA:1.20.58.2200 1512 1570 7.5E-13 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily AL538_04835 f80b6b1154dbd53187869486bf5769bb 1573 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1528 1569 3.9E-14 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal AL538_04835 f80b6b1154dbd53187869486bf5769bb 1573 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 144 1.2E-25 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 Gene3D G3DSA:3.20.80.10 133 287 3.4E-34 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 SMART SM00342 25 109 3.6E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 SUPERFAMILY SSF46689 8 58 8.96E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 SMART SM00871 133 287 6.8E-39 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 SUPERFAMILY SSF55136 133 287 1.16E-32 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 Pfam PF12833 Helix-turn-helix domain 31 111 2.4E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 Gene3D G3DSA:1.10.10.60 63 124 6.3E-13 T 11-10-2018 AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 Pfam PF06445 GyrI-like small molecule binding domain 133 286 3.1E-27 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 SUPERFAMILY SSF46689 62 119 3.72E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19890 8d71d150ce5ab9b485bd1688a22e8f3e 287 Gene3D G3DSA:1.10.10.60 2 62 1.4E-17 T 11-10-2018 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 5.5E-151 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.0E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 7.4E-37 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.708 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Gene3D G3DSA:3.30.70.3400 222 440 6.6E-51 T 11-10-2018 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Gene3D G3DSA:3.30.1360.200 281 434 6.6E-51 T 11-10-2018 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 SUPERFAMILY SSF82866 413 609 3.4E-44 T 11-10-2018 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Pfam PF02355 Protein export membrane protein 436 597 1.5E-17 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 Gene3D G3DSA:1.20.1640.10 451 601 2.2E-7 T 11-10-2018 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 2.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 2.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_12315 88dfeb4bdd17547b4a4a261a4a35d481 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 2.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AL538_18875 5c8e12dba392c9dcad1632ed3743f961 284 Pfam PF12146 Serine aminopeptidase, S33 83 204 3.3E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AL538_18875 5c8e12dba392c9dcad1632ed3743f961 284 SUPERFAMILY SSF53474 35 271 3.91E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18875 5c8e12dba392c9dcad1632ed3743f961 284 Gene3D G3DSA:3.40.50.1820 64 280 1.5E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 Gene3D G3DSA:3.40.50.300 1 243 1.4E-76 T 11-10-2018 AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 SUPERFAMILY SSF52540 1 238 6.81E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 PIRSF PIRSF039085 1 244 8.9E-105 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 Pfam PF00005 ABC transporter 17 168 4.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_09675 30accb347706f64b56cbc16ba8d55b9b 245 SMART SM00382 26 216 8.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21840 fe8aa1953089c24a169c8d4433e016d4 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 340 2.3E-97 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL538_21840 fe8aa1953089c24a169c8d4433e016d4 363 SUPERFAMILY SSF51395 1 363 9.66E-124 T 11-10-2018 AL538_21840 fe8aa1953089c24a169c8d4433e016d4 363 Gene3D G3DSA:3.20.20.70 1 363 7.1E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_07735 4ae4d40288874a334736c176ce273331 126 SUPERFAMILY SSF54995 1 103 1.96E-38 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07735 4ae4d40288874a334736c176ce273331 126 Gene3D G3DSA:3.30.70.60 1 92 3.9E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL538_07735 4ae4d40288874a334736c176ce273331 126 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_07735 4ae4d40288874a334736c176ce273331 126 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.3E-39 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_07735 4ae4d40288874a334736c176ce273331 126 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AL538_07735 4ae4d40288874a334736c176ce273331 126 Pfam PF01250 Ribosomal protein S6 3 91 1.3E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_05030 c995262be6261f19f26e59262d14c358 295 Gene3D G3DSA:3.40.50.300 22 263 4.7E-59 T 11-10-2018 AL538_05030 c995262be6261f19f26e59262d14c358 295 SUPERFAMILY SSF52540 22 283 3.87E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05030 c995262be6261f19f26e59262d14c358 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.7E-22 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL538_05030 c995262be6261f19f26e59262d14c358 295 PIRSF PIRSF003092 6 287 1.4E-85 T 11-10-2018 IPR025501 ATP binding protein MinD AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 SMART SM00895 102 229 1.1E-20 T 11-10-2018 IPR011711 GntR, C-terminal AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 SMART SM00345 21 80 5.3E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 4.5E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 Gene3D G3DSA:1.20.120.530 101 240 2.3E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 Pfam PF07729 FCD domain 102 228 2.9E-21 T 11-10-2018 IPR011711 GntR, C-terminal AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 Gene3D G3DSA:1.10.10.10 12 83 2.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 SUPERFAMILY SSF46785 14 107 7.79E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19795 0d8812231a098532c2dbd42aba5bd627 263 SUPERFAMILY SSF48008 100 237 4.18E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_18045 2a973efd95d0a72e3e550e238af7229a 289 Pfam PF00892 EamA-like transporter family 145 275 1.8E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_18045 2a973efd95d0a72e3e550e238af7229a 289 SUPERFAMILY SSF103481 184 279 1.7E-11 T 11-10-2018 AL538_18045 2a973efd95d0a72e3e550e238af7229a 289 SUPERFAMILY SSF103481 38 139 3.01E-6 T 11-10-2018 AL538_08730 2eabefd3a0914f74aa7f3a0a229c678f 153 SUPERFAMILY SSF55729 9 118 3.06E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_08730 2eabefd3a0914f74aa7f3a0a229c678f 153 Gene3D G3DSA:3.40.630.30 16 136 8.8E-12 T 11-10-2018 AL538_08730 2eabefd3a0914f74aa7f3a0a229c678f 153 Pfam PF13673 Acetyltransferase (GNAT) domain 34 124 5.9E-8 T 11-10-2018 IPR000182 GNAT domain AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Gene3D G3DSA:2.30.42.10 262 365 7.8E-31 T 11-10-2018 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 2.6E-163 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 SUPERFAMILY SSF50156 379 454 7.76E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 SUPERFAMILY SSF50156 233 350 2.8E-25 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Gene3D G3DSA:2.40.10.120 37 261 1.3E-84 T 11-10-2018 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Gene3D G3DSA:2.30.42.10 366 455 1.1E-27 T 11-10-2018 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 SUPERFAMILY SSF50494 22 276 1.07E-63 T 11-10-2018 IPR009003 Peptidase S1, PA clan AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 3.4E-31 T 11-10-2018 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 SMART SM00228 374 447 2.2E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 SMART SM00228 267 349 2.4E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Pfam PF13180 PDZ domain 268 358 2.4E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 Pfam PF13180 PDZ domain 383 446 1.1E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_11515 4f37be8e88b0c4a9be3be26342593cc3 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 8.5E-57 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 SUPERFAMILY SSF55073 315 464 2.75E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 Gene3D G3DSA:3.40.190.10 125 221 1.3E-33 T 11-10-2018 AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 SMART SM00267 299 465 2.2E-50 T 11-10-2018 IPR000160 GGDEF domain AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 463 1.2E-34 T 11-10-2018 IPR000160 GGDEF domain AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 Gene3D G3DSA:3.40.190.10 38 258 1.3E-33 T 11-10-2018 AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 SMART SM00062 40 262 4.4E-6 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 259 6.1E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 SUPERFAMILY SSF53850 41 260 8.15E-36 T 11-10-2018 AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 461 3.6E-36 T 11-10-2018 IPR000160 GGDEF domain AL538_22810 45f20ccde48ac9047f1bba8628afec49 480 Gene3D G3DSA:3.30.70.270 304 471 5.9E-45 T 11-10-2018 AL538_04855 75d7da34410062d4e998f4c728663661 672 Gene3D G3DSA:3.40.50.150 7 253 2.8E-107 T 11-10-2018 AL538_04855 75d7da34410062d4e998f4c728663661 672 SUPERFAMILY SSF51905 266 663 3.32E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_04855 75d7da34410062d4e998f4c728663661 672 Gene3D G3DSA:3.50.50.60 265 663 1.4E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_04855 75d7da34410062d4e998f4c728663661 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 2.0E-46 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL538_04855 75d7da34410062d4e998f4c728663661 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 1.2E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_04855 75d7da34410062d4e998f4c728663661 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 2.3E-153 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL538_04855 75d7da34410062d4e998f4c728663661 672 Gene3D G3DSA:3.30.9.10 349 573 1.4E-132 T 11-10-2018 AL538_04855 75d7da34410062d4e998f4c728663661 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.799 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 Pfam PF01339 CheB methylesterase 186 363 4.4E-58 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 Gene3D G3DSA:3.40.50.2300 2 130 8.6E-32 T 11-10-2018 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 Pfam PF00072 Response regulator receiver domain 5 109 1.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 SUPERFAMILY SSF52738 180 365 2.48E-62 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 PIRSF PIRSF000876 1 369 5.3E-127 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 369 38.685 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 Gene3D G3DSA:3.40.50.180 178 367 3.2E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 SUPERFAMILY SSF52172 2 109 3.98E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL538_05005 c627f51c0feb8374b7714fd64117c19c 371 SMART SM00448 3 126 6.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.3E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 SUPERFAMILY SSF53850 95 294 2.53E-19 T 11-10-2018 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 Gene3D G3DSA:3.40.190.10 166 263 3.8E-47 T 11-10-2018 AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 Gene3D G3DSA:1.10.10.10 9 98 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 Pfam PF03466 LysR substrate binding domain 95 291 7.6E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 SUPERFAMILY SSF46785 4 117 2.02E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_12560 74072630dea53ba9e18d3dfe1c104537 297 Gene3D G3DSA:3.40.190.10 103 288 3.8E-47 T 11-10-2018 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 SUPERFAMILY SSF48498 82 190 1.16E-16 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 Gene3D G3DSA:1.10.357.10 49 191 3.4E-18 T 11-10-2018 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 3.6E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 SUPERFAMILY SSF46689 3 71 6.8E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_18880 4c619224ecd1a49c6a2d47ce30f15563 196 Gene3D G3DSA:1.10.10.60 1 47 2.5E-20 T 11-10-2018 AL538_17020 37816f91b1de79c69fd66d885f146966 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.732 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL538_17020 37816f91b1de79c69fd66d885f146966 298 Gene3D G3DSA:3.20.20.60 2 298 7.9E-98 T 11-10-2018 AL538_17020 37816f91b1de79c69fd66d885f146966 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 1.1E-127 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AL538_17020 37816f91b1de79c69fd66d885f146966 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AL538_17020 37816f91b1de79c69fd66d885f146966 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 1.8E-45 T 11-10-2018 AL538_17020 37816f91b1de79c69fd66d885f146966 298 SUPERFAMILY SSF51621 5 294 4.49E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 4.8E-35 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 SUPERFAMILY SSF89919 2 105 6.41E-32 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 Gene3D G3DSA:3.30.300.20 1 106 3.9E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 5.0E-47 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 Pfam PF02033 Ribosome-binding factor A 7 110 2.1E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL538_06170 2e654a6efead72592bba3ab07bee7db7 135 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.472 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AL538_16870 5c6f7fd7b6257086b504ae9171634a6c 323 SUPERFAMILY SSF53850 27 322 4.56E-91 T 11-10-2018 AL538_16870 5c6f7fd7b6257086b504ae9171634a6c 323 Gene3D G3DSA:3.40.190.10 118 256 5.5E-110 T 11-10-2018 AL538_16870 5c6f7fd7b6257086b504ae9171634a6c 323 Pfam PF16868 NMT1-like family 31 320 4.3E-98 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_16870 5c6f7fd7b6257086b504ae9171634a6c 323 Gene3D G3DSA:3.40.190.10 31 320 5.5E-110 T 11-10-2018 AL538_16870 5c6f7fd7b6257086b504ae9171634a6c 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 320 4.6E-120 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_15015 095940d3bfd8226563da181bdae0744b 287 Gene3D G3DSA:3.40.50.720 1 284 5.6E-62 T 11-10-2018 AL538_15015 095940d3bfd8226563da181bdae0744b 287 SUPERFAMILY SSF51735 4 280 8.37E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15015 095940d3bfd8226563da181bdae0744b 287 Pfam PF04321 RmlD substrate binding domain 4 282 2.9E-47 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 PIRSF PIRSF003078 1 211 3.2E-61 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 4.7E-58 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 SUPERFAMILY SSF53335 8 209 2.71E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 Gene3D G3DSA:3.40.50.150 5 210 1.8E-69 T 11-10-2018 AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.937 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL538_09640 69a43a92ee83fc89912c0c49c065f5ff 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 1.4E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 Gene3D G3DSA:3.40.50.300 5 232 7.3E-54 T 11-10-2018 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 SMART SM00382 24 206 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24380 51b7e9671da58f55f12543e1212284fb 368 SUPERFAMILY SSF52540 13 236 4.83E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24380 51b7e9671da58f55f12543e1212284fb 368 Pfam PF00005 ABC transporter 17 157 4.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 Pfam PF03459 TOBE domain 292 358 1.2E-14 T 11-10-2018 IPR005116 Transport-associated OB, type 1 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 SUPERFAMILY SSF50331 235 358 9.57E-18 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_24380 51b7e9671da58f55f12543e1212284fb 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 Gene3D G3DSA:2.40.50.100 291 359 9.4E-15 T 11-10-2018 AL538_24380 51b7e9671da58f55f12543e1212284fb 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 1.3E-137 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AL538_16290 fcfd967dba41497cee2650666f993b00 284 Gene3D G3DSA:3.40.50.10490 94 276 6.3E-39 T 11-10-2018 AL538_16290 fcfd967dba41497cee2650666f993b00 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL538_16290 fcfd967dba41497cee2650666f993b00 284 Pfam PF01380 SIS domain 124 252 7.0E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_16290 fcfd967dba41497cee2650666f993b00 284 SUPERFAMILY SSF53697 93 278 2.02E-39 T 11-10-2018 AL538_16290 fcfd967dba41497cee2650666f993b00 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16290 fcfd967dba41497cee2650666f993b00 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_06285 c06024849eba042a997e524d3fe99799 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.473 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 AL538_06285 c06024849eba042a997e524d3fe99799 341 Pfam PF05175 Methyltransferase small domain 172 336 9.7E-61 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AL538_06285 c06024849eba042a997e524d3fe99799 341 Gene3D G3DSA:3.40.50.150 1 157 1.3E-49 T 11-10-2018 AL538_06285 c06024849eba042a997e524d3fe99799 341 Gene3D G3DSA:3.40.50.150 158 341 7.8E-41 T 11-10-2018 AL538_06285 c06024849eba042a997e524d3fe99799 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_06285 c06024849eba042a997e524d3fe99799 341 SUPERFAMILY SSF53335 113 324 1.19E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_06285 c06024849eba042a997e524d3fe99799 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 8.3E-57 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 SUPERFAMILY SSF100920 383 539 6.28E-59 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.5E-282 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Gene3D G3DSA:3.30.420.40 179 365 5.2E-165 T 11-10-2018 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Pfam PF00012 Hsp70 protein 4 601 7.4E-259 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Gene3D G3DSA:2.60.34.10 382 522 1.2E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 SUPERFAMILY SSF53067 1 182 1.4E-64 T 11-10-2018 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 35.867 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Gene3D G3DSA:3.30.420.40 5 378 5.2E-165 T 11-10-2018 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 SUPERFAMILY SSF100934 534 607 6.28E-6 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 SUPERFAMILY SSF53067 186 381 4.44E-65 T 11-10-2018 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Gene3D G3DSA:1.20.1270.10 523 602 1.1E-26 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AL538_12730 d45fcf12f8eba1f34434722fa94587b7 638 Gene3D G3DSA:3.90.640.10 228 315 5.2E-165 T 11-10-2018 AL538_23245 672e1f9330c5af162b3809e9d0d26fb3 200 Pfam PF04011 LemA family 10 200 2.5E-68 T 11-10-2018 IPR007156 LemA AL538_23245 672e1f9330c5af162b3809e9d0d26fb3 200 Gene3D G3DSA:1.20.1440.20 19 200 3.2E-63 T 11-10-2018 IPR023353 LemA-like domain superfamily AL538_23245 672e1f9330c5af162b3809e9d0d26fb3 200 SUPERFAMILY SSF140478 29 186 1.83E-55 T 11-10-2018 IPR023353 LemA-like domain superfamily AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 SUPERFAMILY SSF52540 336 571 2.3E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 SUPERFAMILY SSF90123 7 320 1.44E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 Gene3D G3DSA:3.40.50.300 334 580 5.3E-74 T 11-10-2018 AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 Pfam PF00005 ABC transporter 352 500 3.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 Pfam PF00664 ABC transporter transmembrane region 21 291 7.1E-44 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 SMART SM00382 361 547 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 Gene3D G3DSA:1.20.1560.10 3 319 1.1E-75 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_16605 55f081e9e142f3574ac45e4ebdc29b7e 580 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00895 4668bfbfc63757a80c9c40d474fdc20d 157 Pfam PF13185 GAF domain 32 145 1.3E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_00895 4668bfbfc63757a80c9c40d474fdc20d 157 Gene3D G3DSA:3.30.450.40 2 157 1.4E-63 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_00895 4668bfbfc63757a80c9c40d474fdc20d 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AL538_00895 4668bfbfc63757a80c9c40d474fdc20d 157 SUPERFAMILY SSF55781 4 145 6.28E-40 T 11-10-2018 AL538_13655 d7e85cdd32cff134878d57675389a15a 529 Pfam PF02254 TrkA-N domain 388 504 3.9E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_13655 d7e85cdd32cff134878d57675389a15a 529 Gene3D G3DSA:3.40.50.720 379 529 1.7E-32 T 11-10-2018 AL538_13655 d7e85cdd32cff134878d57675389a15a 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.3E-39 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL538_13655 d7e85cdd32cff134878d57675389a15a 529 Gene3D G3DSA:1.20.1530.20 2 361 3.7E-47 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL538_13655 d7e85cdd32cff134878d57675389a15a 529 SUPERFAMILY SSF51735 387 518 1.08E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 SUPERFAMILY SSF46785 1 86 4.75E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 Gene3D G3DSA:1.10.10.10 1 84 1.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 SUPERFAMILY SSF53850 89 294 1.03E-39 T 11-10-2018 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 Gene3D G3DSA:3.40.190.10 91 281 2.2E-66 T 11-10-2018 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 Pfam PF03466 LysR substrate binding domain 89 291 2.8E-43 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_07795 b91acf9a7177ec5bf9ed45ca3c4fcdc3 302 Gene3D G3DSA:3.40.190.10 164 267 2.2E-66 T 11-10-2018 AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 Gene3D G3DSA:3.40.190.10 120 211 2.0E-62 T 11-10-2018 AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 Gene3D G3DSA:3.40.190.10 25 244 2.0E-62 T 11-10-2018 AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 3.2E-36 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 SMART SM00062 33 257 3.1E-36 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_09570 fee88aa3cf43b0e104df501c4a6ff135 258 SUPERFAMILY SSF53850 1 256 4.53E-50 T 11-10-2018 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 SUPERFAMILY SSF53383 7 409 1.97E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 1.7E-203 T 11-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 Pfam PF00202 Aminotransferase class-III 17 406 9.7E-79 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 PIRSF PIRSF000521 2 127 7.1E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 PIRSF PIRSF000521 175 412 6.1E-30 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 PIRSF PIRSF000521 120 154 2.7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 Gene3D G3DSA:3.90.1150.10 5 405 3.4E-107 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 Gene3D G3DSA:3.40.640.10 54 313 3.4E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_01395 b5924ca4d1f097367b0ba9b6eedbdc5f 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 1.8E-146 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 AL538_17535 29957145dbfef5d4f768742a0056652d 96 Gene3D G3DSA:1.10.10.10 32 83 2.2E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17535 29957145dbfef5d4f768742a0056652d 96 Pfam PF02001 Protein of unknown function DUF134 2 89 3.2E-21 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AL538_17535 29957145dbfef5d4f768742a0056652d 96 SUPERFAMILY SSF88659 36 79 6.54E-6 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_17535 29957145dbfef5d4f768742a0056652d 96 Hamap MF_00674 UPF0251 protein . 2 95 23.852 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 AL538_12545 d41eadf7d022d046ff6df30ca63aab89 476 Pfam PF03553 Na+/H+ antiporter family 40 243 3.5E-14 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 Pfam PF12833 Helix-turn-helix domain 189 267 4.7E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 SUPERFAMILY SSF51215 30 133 3.66E-5 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 Gene3D G3DSA:1.10.10.60 217 269 6.3E-15 T 11-10-2018 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 Gene3D G3DSA:1.10.10.60 169 216 1.9E-10 T 11-10-2018 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 SMART SM00342 183 266 8.9E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 SUPERFAMILY SSF46689 170 216 3.09E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19565 1d46b30b1d8be0191f1fc9a3c0374bbc 270 SUPERFAMILY SSF46689 220 268 2.64E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 SUPERFAMILY SSF51569 4 208 2.38E-67 T 11-10-2018 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 Pfam PF01081 KDPG and KHG aldolase 4 198 1.4E-78 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 6.0E-83 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AL538_19760 2b1596f01b9a643dbb9d07d6266030d4 209 Gene3D G3DSA:3.20.20.70 1 209 9.7E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.673 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 Gene3D G3DSA:3.10.310.10 5 272 7.5E-107 T 11-10-2018 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 SUPERFAMILY SSF54506 2 274 9.72E-54 T 11-10-2018 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.8E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 Pfam PF01678 Diaminopimelate epimerase 154 269 2.2E-31 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 4.3E-101 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AL538_09120 21ec7c376dca2d3b45803b8540f8bfcd 276 Gene3D G3DSA:3.10.310.10 117 263 7.5E-107 T 11-10-2018 AL538_14420 08c96d5d47ee2481cf2b8c66f9438992 105 Gene3D G3DSA:1.10.3340.10 4 105 5.3E-46 T 11-10-2018 IPR036810 SMc04008-like superfamily AL538_14420 08c96d5d47ee2481cf2b8c66f9438992 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 5.6E-36 T 11-10-2018 IPR023163 SMc04008-like domain AL538_14420 08c96d5d47ee2481cf2b8c66f9438992 105 SUPERFAMILY SSF158757 8 85 8.5E-37 T 11-10-2018 IPR036810 SMc04008-like superfamily AL538_27210 96042193f98f4e59cc776022cb7264bf 97 SUPERFAMILY SSF46785 5 82 3.24E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_27210 96042193f98f4e59cc776022cb7264bf 97 Gene3D G3DSA:1.10.10.10 2 87 2.2E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17940 29785d1297836931469cfbe58f797cbf 182 SUPERFAMILY SSF54427 25 164 1.61E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_17940 29785d1297836931469cfbe58f797cbf 182 Gene3D G3DSA:3.10.450.50 19 168 5.1E-29 T 11-10-2018 AL538_17940 29785d1297836931469cfbe58f797cbf 182 Pfam PF13577 SnoaL-like domain 25 147 1.3E-18 T 11-10-2018 IPR037401 SnoaL-like domain AL538_23350 e55f68d31ab90caa5c993327cf82ce7b 685 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 186 198 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AL538_23350 e55f68d31ab90caa5c993327cf82ce7b 685 SMART SM00220 65 324 4.3E-12 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_23350 e55f68d31ab90caa5c993327cf82ce7b 685 SUPERFAMILY SSF56112 65 290 6.34E-37 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_23350 e55f68d31ab90caa5c993327cf82ce7b 685 Gene3D G3DSA:1.10.510.10 45 322 2.8E-35 T 11-10-2018 AL538_23350 e55f68d31ab90caa5c993327cf82ce7b 685 Pfam PF00069 Protein kinase domain 82 263 4.2E-30 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 Gene3D G3DSA:3.30.565.10 294 413 2.2E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 1.2E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 SMART SM00388 220 286 1.6E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 SUPERFAMILY SSF47384 205 282 2.55E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 Gene3D G3DSA:1.10.287.130 172 286 6.3E-11 T 11-10-2018 AL538_25275 3f2ba3576692756d500654ed04fe10bf 413 SUPERFAMILY SSF55874 295 401 3.44E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_21190 6b83414e7aa79fdf63a52faae00f4d96 152 Pfam PF04314 Copper chaperone PCu(A)C 36 138 3.2E-18 T 11-10-2018 IPR007410 Copper chaperone PCuAC AL538_21190 6b83414e7aa79fdf63a52faae00f4d96 152 SUPERFAMILY SSF110087 9 147 1.96E-28 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_21190 6b83414e7aa79fdf63a52faae00f4d96 152 Gene3D G3DSA:2.60.40.1890 39 150 4.8E-21 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_04030 91be81ab66eeb6ab480e9752f7021c77 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 9.1E-113 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein AL538_04030 91be81ab66eeb6ab480e9752f7021c77 321 SUPERFAMILY SSF53822 43 275 7.92E-18 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_04030 91be81ab66eeb6ab480e9752f7021c77 321 Gene3D G3DSA:3.40.50.2300 46 292 3.4E-100 T 11-10-2018 AL538_04030 91be81ab66eeb6ab480e9752f7021c77 321 Gene3D G3DSA:3.40.50.2300 143 314 3.4E-100 T 11-10-2018 AL538_00275 4084d78c89b487e692937c283de4806b 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL538_00275 4084d78c89b487e692937c283de4806b 157 Gene3D G3DSA:3.40.140.10 36 157 2.8E-41 T 11-10-2018 AL538_00275 4084d78c89b487e692937c283de4806b 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 24 157 4.1E-43 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL538_00275 4084d78c89b487e692937c283de4806b 157 Pfam PF04002 RadC-like JAB domain 39 155 6.7E-43 T 11-10-2018 IPR025657 RadC-like JAB domain AL538_00275 4084d78c89b487e692937c283de4806b 157 SUPERFAMILY SSF102712 51 124 8.37E-6 T 11-10-2018 AL538_08195 a4a5f0fb50a47d3a23a510940ebad149 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 49.922 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AL538_08195 a4a5f0fb50a47d3a23a510940ebad149 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 7.9E-62 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL538_08195 a4a5f0fb50a47d3a23a510940ebad149 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 7.4E-87 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AL538_12030 c1c9668ecea6330e0ff77a8aaf7fb01b 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 3.3E-22 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AL538_23150 4e92792276845efaf7b2ed6fba1d5a87 156 SUPERFAMILY SSF81573 63 121 1.57E-10 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AL538_23150 4e92792276845efaf7b2ed6fba1d5a87 156 Gene3D G3DSA:1.20.5.620 62 122 1.5E-13 T 11-10-2018 AL538_23150 4e92792276845efaf7b2ed6fba1d5a87 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.726 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_23150 4e92792276845efaf7b2ed6fba1d5a87 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.8E-45 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL538_23150 4e92792276845efaf7b2ed6fba1d5a87 156 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 5.6E-30 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 Gene3D G3DSA:3.10.310.70 102 222 4.4E-104 T 11-10-2018 AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 SUPERFAMILY SSF51556 82 516 5.17E-29 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 Gene3D G3DSA:2.30.40.10 40 532 4.4E-104 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 SUPERFAMILY SSF51338 10 557 1.61E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 Pfam PF07969 Amidohydrolase family 71 556 8.4E-89 T 11-10-2018 IPR013108 Amidohydrolase 3 AL538_18510 59b0c107f06097a887af857e4b4ca4a5 562 Gene3D G3DSA:3.20.20.140 83 515 4.4E-104 T 11-10-2018 AL538_01190 9d9f38bfdc22cc87fc1db98b1bfd0c4f 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 2.5E-60 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AL538_01190 9d9f38bfdc22cc87fc1db98b1bfd0c4f 238 SUPERFAMILY SSF100950 3 237 1.34E-59 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_01190 9d9f38bfdc22cc87fc1db98b1bfd0c4f 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 1.8E-52 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AL538_01190 9d9f38bfdc22cc87fc1db98b1bfd0c4f 238 Gene3D G3DSA:3.40.50.1360 1 238 4.0E-87 T 11-10-2018 AL538_20255 9f4d87e2feeb98ee6e5f2b02c598af19 183 SUPERFAMILY SSF55729 16 181 2.09E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_20255 9f4d87e2feeb98ee6e5f2b02c598af19 183 Pfam PF13302 Acetyltransferase (GNAT) domain 21 158 5.2E-23 T 11-10-2018 IPR000182 GNAT domain AL538_20255 9f4d87e2feeb98ee6e5f2b02c598af19 183 Gene3D G3DSA:3.40.630.30 9 183 2.3E-33 T 11-10-2018 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AL538_08600 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AL538_19935 e5b42e724ea8030f4189ef6b6649c3a4 924 SUPERFAMILY SSF48208 363 845 5.1E-69 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_19935 e5b42e724ea8030f4189ef6b6649c3a4 924 Gene3D G3DSA:1.50.10.10 419 765 3.4E-42 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL538_19935 e5b42e724ea8030f4189ef6b6649c3a4 924 Pfam PF06202 Amylo-alpha-1,6-glucosidase 402 766 3.8E-106 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 AL538_00330 1f9a089bdffe00b97d6439ebdfa77eb3 252 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 241 1.5E-46 T 11-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 AL538_00330 1f9a089bdffe00b97d6439ebdfa77eb3 252 Gene3D G3DSA:3.30.70.2660 1 249 1.2E-57 T 11-10-2018 AL538_00330 1f9a089bdffe00b97d6439ebdfa77eb3 252 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 2.6E-15 T 11-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal AL538_00330 1f9a089bdffe00b97d6439ebdfa77eb3 252 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 241 8.9E-50 T 11-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 AL538_13080 80415c8f96a5ad8408c416ee83f3713e 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 1.6E-27 T 11-10-2018 AL538_13080 80415c8f96a5ad8408c416ee83f3713e 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.22 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL538_13080 80415c8f96a5ad8408c416ee83f3713e 105 Gene3D G3DSA:3.30.460.10 3 105 3.0E-37 T 11-10-2018 AL538_13080 80415c8f96a5ad8408c416ee83f3713e 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.2E-38 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL538_13080 80415c8f96a5ad8408c416ee83f3713e 105 SUPERFAMILY SSF81301 5 105 4.74E-38 T 11-10-2018 AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 Pfam PF03466 LysR substrate binding domain 88 291 8.5E-35 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 Gene3D G3DSA:3.40.190.10 93 290 9.3E-50 T 11-10-2018 AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 Gene3D G3DSA:1.10.10.10 4 92 8.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 SUPERFAMILY SSF53850 89 296 9.77E-37 T 11-10-2018 AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 Gene3D G3DSA:3.40.190.10 163 266 9.3E-50 T 11-10-2018 AL538_17820 f34d254a2009b0036b7214ddfd7e427f 316 SUPERFAMILY SSF46785 6 88 3.83E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03505 12e24e5ba425636bf2b07d88272850b9 346 Pfam PF00535 Glycosyl transferase family 2 25 187 3.2E-32 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_03505 12e24e5ba425636bf2b07d88272850b9 346 Gene3D G3DSA:3.90.550.10 6 203 7.1E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_03505 12e24e5ba425636bf2b07d88272850b9 346 SUPERFAMILY SSF53448 22 232 3.31E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_15170 d1496933a09de8f3c2407c99ca10efc5 211 SUPERFAMILY SSF160527 99 203 3.66E-5 T 11-10-2018 AL538_15170 d1496933a09de8f3c2407c99ca10efc5 211 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 5.1E-40 T 11-10-2018 IPR012842 Type III secretion system HrpE/YscL AL538_15170 d1496933a09de8f3c2407c99ca10efc5 211 Pfam PF02108 Flagellar assembly protein FliH 83 194 4.5E-18 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL538_06955 1482234c9389e805e6663594867d8f4b 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 5.2E-28 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 AL538_01440 fda9381181911cf4324e03f53696052d 555 SUPERFAMILY SSF53850 133 554 3.98E-38 T 11-10-2018 AL538_01440 fda9381181911cf4324e03f53696052d 555 Gene3D G3DSA:3.40.190.10 123 315 2.0E-30 T 11-10-2018 AL538_01440 fda9381181911cf4324e03f53696052d 555 SUPERFAMILY SSF46785 20 68 1.28E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01440 fda9381181911cf4324e03f53696052d 555 Pfam PF12793 Sugar transport-related sRNA regulator N-term 18 110 1.2E-20 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL538_01440 fda9381181911cf4324e03f53696052d 555 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 179 300 3.2E-13 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_01440 fda9381181911cf4324e03f53696052d 555 Gene3D G3DSA:1.10.10.10 10 111 4.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20740 f94669be85085dfd0e1b475c9a9752e4 337 Gene3D G3DSA:3.30.70.270 164 336 8.9E-49 T 11-10-2018 AL538_20740 f94669be85085dfd0e1b475c9a9752e4 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 2.3E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_20740 f94669be85085dfd0e1b475c9a9752e4 337 SUPERFAMILY SSF55073 183 335 1.57E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_20740 f94669be85085dfd0e1b475c9a9752e4 337 SMART SM00267 167 337 2.0E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_20740 f94669be85085dfd0e1b475c9a9752e4 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 6.0E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_08955 d75d3bb2481cb66f36203d76f187b1ae 284 Gene3D G3DSA:1.10.357.140 19 173 2.8E-44 T 11-10-2018 AL538_08955 d75d3bb2481cb66f36203d76f187b1ae 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.8E-70 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AL538_08955 d75d3bb2481cb66f36203d76f187b1ae 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.904 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL538_08955 d75d3bb2481cb66f36203d76f187b1ae 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 5.0E-109 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AL538_15955 f031a45abc8e78626c66ac267dced03b 260 SMART SM00382 38 227 4.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15955 f031a45abc8e78626c66ac267dced03b 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_15955 f031a45abc8e78626c66ac267dced03b 260 Pfam PF00005 ABC transporter 30 178 5.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_15955 f031a45abc8e78626c66ac267dced03b 260 SUPERFAMILY SSF52540 3 252 7.22E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15955 f031a45abc8e78626c66ac267dced03b 260 Gene3D G3DSA:3.40.50.300 1 259 2.9E-69 T 11-10-2018 AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Gene3D G3DSA:3.30.1370.120 188 258 6.0E-21 T 11-10-2018 IPR038591 NolW-like superfamily AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Gene3D G3DSA:3.30.1370.120 21 185 4.4E-52 T 11-10-2018 IPR038591 NolW-like superfamily AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Pfam PF00263 Bacterial type II and III secretion system protein 452 614 5.2E-51 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 559 592 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 623 8.9E-160 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 11-10-2018 IPR005644 NolW-like AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Pfam PF03958 Bacterial type II/III secretion system short domain 266 345 2.3E-18 T 11-10-2018 IPR005644 NolW-like AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 2.9E-16 T 11-10-2018 IPR005644 NolW-like AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 Gene3D G3DSA:3.30.1370.120 263 343 1.8E-17 T 11-10-2018 IPR038591 NolW-like superfamily AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 578 596 3.3E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 448 472 3.3E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 3.3E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 601 615 3.3E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL538_10255 f8af5ede6bf830785b4f6edc5f1aa889 678 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 355 3.3E-38 T 11-10-2018 IPR001775 GspD/PilQ family AL538_14620 fb763a52145767b7094765da6390f00b 252 Gene3D G3DSA:3.90.550.10 1 252 6.3E-98 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14620 fb763a52145767b7094765da6390f00b 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.86 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL538_14620 fb763a52145767b7094765da6390f00b 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 3.2E-118 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AL538_14620 fb763a52145767b7094765da6390f00b 252 Pfam PF02348 Cytidylyltransferase 5 221 4.0E-67 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AL538_14620 fb763a52145767b7094765da6390f00b 252 SUPERFAMILY SSF53448 1 249 7.21E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14305 2111843f0d002ceb97c5b74987bca699 435 Gene3D G3DSA:3.60.120.10 1 429 1.8E-128 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_14305 2111843f0d002ceb97c5b74987bca699 435 SUPERFAMILY SSF56322 27 425 3.01E-102 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_14305 2111843f0d002ceb97c5b74987bca699 435 Pfam PF00425 chorismate binding enzyme 165 417 5.8E-72 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL538_14305 2111843f0d002ceb97c5b74987bca699 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.05 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL538_14305 2111843f0d002ceb97c5b74987bca699 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 2.9E-102 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AL538_05955 3fa651fef95d15a7587aab86621a0467 462 SUPERFAMILY SSF53300 136 417 2.14E-22 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_05955 3fa651fef95d15a7587aab86621a0467 462 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 60 8.9E-6 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL538_05955 3fa651fef95d15a7587aab86621a0467 462 SMART SM00327 139 421 1.1E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_05955 3fa651fef95d15a7587aab86621a0467 462 Pfam PF00092 von Willebrand factor type A domain 141 261 1.7E-11 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 SMART SM00796 6 203 1.8E-63 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 Gene3D G3DSA:3.30.1360.40 6 81 2.4E-8 T 11-10-2018 AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 SUPERFAMILY SSF160467 8 97 1.02E-9 T 11-10-2018 AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 Gene3D G3DSA:2.40.100.10 91 227 3.4E-46 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 197 2.4E-54 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AL538_24230 314da9f4cec147f2ae519e61cfd6fe5d 227 SUPERFAMILY SSF50891 93 220 7.59E-36 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_00530 565e34d8d759a3182b1f5b5f744898a2 137 Pfam PF00293 NUDIX domain 5 117 2.7E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_00530 565e34d8d759a3182b1f5b5f744898a2 137 PRINTS PR00502 NUDIX hydrolase family signature 43 58 2.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_00530 565e34d8d759a3182b1f5b5f744898a2 137 PRINTS PR00502 NUDIX hydrolase family signature 29 43 2.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_00530 565e34d8d759a3182b1f5b5f744898a2 137 Gene3D G3DSA:3.90.79.10 3 136 2.7E-23 T 11-10-2018 AL538_00530 565e34d8d759a3182b1f5b5f744898a2 137 SUPERFAMILY SSF55811 5 120 1.76E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 SUPERFAMILY SSF102114 39 382 4.05E-38 T 11-10-2018 AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 Pfam PF13186 Iron-sulfur cluster-binding domain 313 373 1.6E-7 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 Pfam PF04055 Radical SAM superfamily 39 206 7.4E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 312 401 2.2E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 30 417 1.2E-151 T 11-10-2018 AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 190 424 2.0E-10 T 11-10-2018 AL538_00200 0a2a09e6d04ce8ecc81d690eab0db2f9 425 Gene3D G3DSA:3.20.20.70 27 422 5.3E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15315 4ec935ce9f2e1958ff4f0e9d377f2664 457 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 3.9E-10 T 11-10-2018 IPR021570 LamB-type porin N-terminal domain AL538_15315 4ec935ce9f2e1958ff4f0e9d377f2664 457 SUPERFAMILY SSF56935 56 457 1.37E-105 T 11-10-2018 AL538_15315 4ec935ce9f2e1958ff4f0e9d377f2664 457 Gene3D G3DSA:2.40.170.10 54 457 1.4E-141 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 AL538_15315 4ec935ce9f2e1958ff4f0e9d377f2664 457 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 62 453 3.0E-111 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_15315 4ec935ce9f2e1958ff4f0e9d377f2664 457 Pfam PF02264 LamB porin 58 457 1.4E-96 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 SUPERFAMILY SSF47090 456 531 2.35E-12 T 11-10-2018 IPR036365 PGBD-like superfamily AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 Gene3D G3DSA:1.10.101.10 461 528 2.1E-22 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 Pfam PF13401 AAA domain 42 171 1.4E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 Gene3D G3DSA:3.90.70.10 344 460 1.1E-33 T 11-10-2018 AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 SUPERFAMILY SSF52540 6 264 9.3E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 Gene3D G3DSA:3.40.50.300 25 184 2.8E-15 T 11-10-2018 AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 Pfam PF01471 Putative peptidoglycan binding domain 468 523 1.8E-7 T 11-10-2018 IPR002477 Peptidoglycan binding-like AL538_11425 b40902b568fb7fa9ef7af65a3efc88aa 542 SMART SM00382 42 195 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_20210 77a11470a6884471fe69bd5693501cec 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_20210 77a11470a6884471fe69bd5693501cec 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_20210 77a11470a6884471fe69bd5693501cec 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_20210 77a11470a6884471fe69bd5693501cec 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_20210 77a11470a6884471fe69bd5693501cec 142 SUPERFAMILY SSF46785 3 140 3.5E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20210 77a11470a6884471fe69bd5693501cec 142 SMART SM00347 28 128 3.4E-27 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_20210 77a11470a6884471fe69bd5693501cec 142 Gene3D G3DSA:1.10.10.10 1 142 3.1E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20210 77a11470a6884471fe69bd5693501cec 142 Pfam PF01047 MarR family 35 92 6.9E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_00065 1e1798c83a160e02383746dae0def500 288 Pfam PF03881 Fructosamine kinase 1 286 1.5E-124 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL538_00065 1e1798c83a160e02383746dae0def500 288 SUPERFAMILY SSF56112 3 282 9.29E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_00065 1e1798c83a160e02383746dae0def500 288 Gene3D G3DSA:3.30.200.20 1 93 6.1E-22 T 11-10-2018 AL538_00065 1e1798c83a160e02383746dae0def500 288 Gene3D G3DSA:3.90.1200.10 97 288 1.8E-67 T 11-10-2018 AL538_00065 1e1798c83a160e02383746dae0def500 288 PIRSF PIRSF006221 1 288 4.2E-109 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 SMART SM00098 27 451 2.9E-55 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 Gene3D G3DSA:3.40.720.10 464 525 1.2E-6 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 Gene3D G3DSA:3.40.720.10 24 377 1.9E-140 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 Gene3D G3DSA:1.10.1200.140 388 438 7.2E-28 T 11-10-2018 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 SUPERFAMILY SSF53649 9 504 6.38E-114 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 Pfam PF00245 Alkaline phosphatase 26 501 3.2E-84 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 Gene3D G3DSA:3.30.40.70 439 463 3.2E-19 T 11-10-2018 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 1.9E-37 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 1.9E-37 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 1.9E-37 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 1.9E-37 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_04700 958344f8dfb4f65b3e11c5e8b7a2ba1e 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 1.9E-37 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 2.7E-112 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.1E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.1E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 1.1E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 1.1E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.1E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 258 4.7E-44 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 SUPERFAMILY SSF52374 4 280 3.56E-85 T 11-10-2018 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.138 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 Gene3D G3DSA:3.40.50.620 79 214 2.8E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_06410 78cb7488bd8f3039b7ed67bc84d16a70 294 Gene3D G3DSA:3.40.50.620 4 280 2.8E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.4E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.4E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 Gene3D G3DSA:3.40.50.2300 55 305 1.3E-65 T 11-10-2018 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 SUPERFAMILY SSF47413 2 59 1.01E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 Gene3D G3DSA:3.40.50.2300 160 289 1.3E-65 T 11-10-2018 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.8E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 SMART SM00354 1 71 1.6E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 SUPERFAMILY SSF53822 61 325 8.57E-67 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 Pfam PF13377 Periplasmic binding protein-like domain 168 316 1.1E-27 T 11-10-2018 AL538_07180 05956cfe14a025481c7ec734c2ce46a4 332 Gene3D G3DSA:1.10.260.40 1 54 6.5E-23 T 11-10-2018 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 11-10-2018 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 11-10-2018 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 11-10-2018 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 11-10-2018 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AL538_07470 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 11-10-2018 AL538_01055 b109be3488f2d10cd820e95ef90c172f 301 SUPERFAMILY SSF103481 205 268 2.75E-5 T 11-10-2018 AL538_01055 b109be3488f2d10cd820e95ef90c172f 301 Pfam PF00892 EamA-like transporter family 3 123 1.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_01055 b109be3488f2d10cd820e95ef90c172f 301 Pfam PF00892 EamA-like transporter family 139 273 6.9E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_01055 b109be3488f2d10cd820e95ef90c172f 301 SUPERFAMILY SSF103481 41 123 2.48E-7 T 11-10-2018 AL538_18320 fc31f0017a7742f18b166c4dea86936c 225 Pfam PF00912 Transglycosylase 51 217 1.2E-51 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_18320 fc31f0017a7742f18b166c4dea86936c 225 SUPERFAMILY SSF53955 52 222 6.75E-58 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_18320 fc31f0017a7742f18b166c4dea86936c 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 5 221 3.7E-64 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_18320 fc31f0017a7742f18b166c4dea86936c 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 223 36.657 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_18320 fc31f0017a7742f18b166c4dea86936c 225 Gene3D G3DSA:1.10.3810.10 48 224 2.4E-54 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06465 e655479f6204620883325081eb00041a 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_06465 e655479f6204620883325081eb00041a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_06465 e655479f6204620883325081eb00041a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_06465 e655479f6204620883325081eb00041a 204 Gene3D G3DSA:1.10.357.10 1 204 3.0E-88 T 11-10-2018 AL538_06465 e655479f6204620883325081eb00041a 204 SUPERFAMILY SSF48498 89 197 5.78E-10 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_06465 e655479f6204620883325081eb00041a 204 SUPERFAMILY SSF46689 8 84 8.48E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 Gene3D G3DSA:3.40.190.10 163 267 2.5E-72 T 11-10-2018 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 SUPERFAMILY SSF53850 89 296 3.48E-40 T 11-10-2018 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 Gene3D G3DSA:1.10.10.10 1 92 3.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 Pfam PF03466 LysR substrate binding domain 89 293 1.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 Gene3D G3DSA:3.40.190.10 93 290 2.5E-72 T 11-10-2018 AL538_03445 a439f52aa096692d64aff7e6f9d15a4a 303 SUPERFAMILY SSF46785 1 112 4.76E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_24815 39d7bca67414e01fa8a809b70c3d9cdb 1018 SUPERFAMILY SSF52540 1 1000 7.03E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24815 39d7bca67414e01fa8a809b70c3d9cdb 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 910 971 4.3E-12 T 11-10-2018 AL538_24815 39d7bca67414e01fa8a809b70c3d9cdb 1018 Gene3D G3DSA:3.40.50.300 726 1012 4.3E-24 T 11-10-2018 AL538_24815 39d7bca67414e01fa8a809b70c3d9cdb 1018 Gene3D G3DSA:3.40.50.300 1 304 8.2E-43 T 11-10-2018 AL538_24815 39d7bca67414e01fa8a809b70c3d9cdb 1018 Pfam PF13476 AAA domain 5 260 2.3E-25 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain AL538_03435 835baa8edc47a1401154f2fc81768385 133 PIRSF PIRSF007010 1 130 1.5E-54 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL538_03435 835baa8edc47a1401154f2fc81768385 133 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 1.4E-49 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein AL538_03435 835baa8edc47a1401154f2fc81768385 133 Gene3D G3DSA:3.30.300.250 18 129 4.0E-41 T 11-10-2018 AL538_04255 170ee3a34a978f2d0e90be705f8a6fc2 251 SUPERFAMILY SSF54427 107 246 1.05E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_04255 170ee3a34a978f2d0e90be705f8a6fc2 251 Pfam PF04335 VirB8 protein 36 246 3.8E-41 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AL538_04255 170ee3a34a978f2d0e90be705f8a6fc2 251 PIRSF PIRSF003299 21 250 4.3E-48 T 11-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 AL538_04255 170ee3a34a978f2d0e90be705f8a6fc2 251 Gene3D G3DSA:3.10.450.230 104 251 6.4E-40 T 11-10-2018 AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 3 766 0.0 T 11-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 Pfam PF02901 Pyruvate formate lyase-like 3 627 5.3E-194 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 ProSitePatterns PS00850 Glycine radical domain signature. 737 745 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 SUPERFAMILY SSF51998 2 765 6.71E-204 T 11-10-2018 AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 Pfam PF01228 Glycine radical 647 748 6.4E-27 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 AL538_15005 b939cb97b8e6db3fe559de221e25315a 766 Gene3D G3DSA:3.20.70.20 2 766 4.5E-271 T 11-10-2018 AL538_21120 64e58381e7caf3eac71ceaf03490a978 494 SUPERFAMILY SSF46894 8 104 3.97E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_21120 64e58381e7caf3eac71ceaf03490a978 494 Gene3D G3DSA:1.25.40.10 298 491 6.9E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_21120 64e58381e7caf3eac71ceaf03490a978 494 Gene3D G3DSA:1.10.10.10 6 123 1.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21120 64e58381e7caf3eac71ceaf03490a978 494 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 102 4.8E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_21120 64e58381e7caf3eac71ceaf03490a978 494 SMART SM00862 26 102 9.1E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SMART SM00710 194 216 7400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SMART SM00710 130 156 2100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SMART SM00710 341 375 110.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SMART SM00710 294 329 5700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SMART SM00710 401 422 12.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 Pfam PF14592 Chondroitinase B 71 471 8.7E-39 T 11-10-2018 IPR039513 PL-6 family AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 Gene3D G3DSA:2.160.20.10 70 537 5.9E-90 T 11-10-2018 IPR012334 Pectin lyase fold AL538_15485 24be2ae913c84b2bab77db6d970f962b 538 SUPERFAMILY SSF51126 70 487 1.63E-65 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL538_10480 61e2f029fe882e7d8dc85e25292af13b 472 SUPERFAMILY SSF48452 362 450 1.48E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10480 61e2f029fe882e7d8dc85e25292af13b 472 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 103 3.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_10480 61e2f029fe882e7d8dc85e25292af13b 472 SUPERFAMILY SSF46894 14 103 7.37E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_10480 61e2f029fe882e7d8dc85e25292af13b 472 Gene3D G3DSA:1.10.10.10 10 109 2.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_10480 61e2f029fe882e7d8dc85e25292af13b 472 SMART SM00862 28 103 2.7E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 SMART SM00562 3 140 4.7E-94 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.1E-59 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.789 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 SUPERFAMILY SSF54919 1 140 2.36E-62 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.2E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.2E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.2E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.2E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.2E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_12390 451f443a4a8fd52624275955bcbdc4cd 141 Gene3D G3DSA:3.30.70.141 1 141 2.6E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 Pfam PF01709 Transcriptional regulator 5 235 6.5E-71 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.894 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 SUPERFAMILY SSF75625 1 237 1.31E-74 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 Gene3D G3DSA:3.30.70.980 131 202 2.3E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 Gene3D G3DSA:3.30.70.980 83 235 2.3E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_19365 bf9a86b0bd16be631560720ec796d6ae 238 Gene3D G3DSA:1.10.10.200 17 78 2.7E-17 T 11-10-2018 IPR017856 Integrase-like, N-terminal AL538_26685 64b484e86c297b8a3c325026d134e822 443 Gene3D G3DSA:2.40.30.10 219 314 4.2E-12 T 11-10-2018 AL538_26685 64b484e86c297b8a3c325026d134e822 443 SUPERFAMILY SSF63380 227 316 2.55E-14 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_26685 64b484e86c297b8a3c325026d134e822 443 Gene3D G3DSA:3.40.50.80 317 443 3.5E-18 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_26685 64b484e86c297b8a3c325026d134e822 443 Pfam PF08022 FAD-binding domain 238 315 5.3E-8 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AL538_26685 64b484e86c297b8a3c325026d134e822 443 Pfam PF00175 Oxidoreductase NAD-binding domain 327 420 6.6E-7 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AL538_26685 64b484e86c297b8a3c325026d134e822 443 SUPERFAMILY SSF52343 318 438 9.17E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_26685 64b484e86c297b8a3c325026d134e822 443 Pfam PF01794 Ferric reductase like transmembrane component 43 179 4.0E-17 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AL538_23640 170d1633d1c233a0a76072761703d54f 298 Gene3D G3DSA:3.20.20.70 1 298 1.8E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_23640 170d1633d1c233a0a76072761703d54f 298 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 11-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 AL538_23640 170d1633d1c233a0a76072761703d54f 298 Pfam PF00682 HMGL-like 7 275 3.5E-51 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AL538_23640 170d1633d1c233a0a76072761703d54f 298 SUPERFAMILY SSF51569 2 290 2.49E-71 T 11-10-2018 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 SUPERFAMILY SSF56601 348 782 3.09E-107 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 PIRSF PIRSF002799 18 795 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Gene3D G3DSA:3.30.2060.10 97 186 8.1E-261 T 11-10-2018 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Gene3D G3DSA:3.40.710.10 89 746 8.1E-261 T 11-10-2018 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 199 733 1.1E-157 T 11-10-2018 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Gene3D G3DSA:1.10.3810.10 187 390 8.1E-261 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 54 777 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Pfam PF14814 Bifunctional transglycosylase second domain 99 182 7.1E-27 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Pfam PF00905 Penicillin binding protein transpeptidase domain 458 696 5.2E-24 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 Pfam PF00912 Transglycosylase 195 365 2.9E-59 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_06390 7bbdafb54ea32647190afe2e2d0c5a10 795 SUPERFAMILY SSF53955 192 388 1.12E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 Pfam PF00072 Response regulator receiver domain 6 111 1.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 SUPERFAMILY SSF52172 3 136 1.35E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 Pfam PF12840 Helix-turn-helix domain 133 188 6.9E-7 T 11-10-2018 AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 Gene3D G3DSA:1.10.10.10 118 207 1.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 SMART SM00418 134 206 0.0052 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 SMART SM00448 3 114 5.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 SUPERFAMILY SSF46785 133 204 2.68E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17190 a3903b49f8aba58ec3fae8ac56594b3d 209 Gene3D G3DSA:3.40.50.2300 4 117 1.4E-30 T 11-10-2018 AL538_16335 41bfa3fd378934f3c78777ac85e74af9 420 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 2.8E-42 T 11-10-2018 IPR010352 Protein of unknown function DUF945 AL538_14710 17b7304983ecfc77e1386cd1d7d8d9ee 180 Pfam PF07445 Primosomal replication protein priC 5 177 1.4E-39 T 11-10-2018 IPR010890 Primosomal replication PriB/PriC AL538_14710 17b7304983ecfc77e1386cd1d7d8d9ee 180 Gene3D G3DSA:1.20.1270.340 1 97 2.7E-13 T 11-10-2018 IPR038338 PriB/PriC superfamily AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 Gene3D G3DSA:3.40.30.10 109 185 2.8E-19 T 11-10-2018 AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 SUPERFAMILY SSF52833 109 189 3.89E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_26265 ca241805e0c7aa30fc5fb88b77473e21 204 Pfam PF00462 Glutaredoxin 109 174 1.0E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_10265 5315d2c2e031d2461381df68263db370 406 Gene3D G3DSA:1.20.81.30 258 370 3.9E-25 T 11-10-2018 AL538_10265 5315d2c2e031d2461381df68263db370 406 Gene3D G3DSA:1.20.81.30 56 173 4.0E-37 T 11-10-2018 AL538_10265 5315d2c2e031d2461381df68263db370 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 3.2E-153 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AL538_10265 5315d2c2e031d2461381df68263db370 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.1E-37 T 11-10-2018 IPR003004 GspF/PilC family AL538_10265 5315d2c2e031d2461381df68263db370 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.1E-37 T 11-10-2018 IPR003004 GspF/PilC family AL538_10265 5315d2c2e031d2461381df68263db370 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.1E-37 T 11-10-2018 IPR003004 GspF/PilC family AL538_10265 5315d2c2e031d2461381df68263db370 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.1E-37 T 11-10-2018 IPR003004 GspF/PilC family AL538_10265 5315d2c2e031d2461381df68263db370 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL538_10265 5315d2c2e031d2461381df68263db370 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.1E-24 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_10265 5315d2c2e031d2461381df68263db370 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.4E-34 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 Gene3D G3DSA:1.10.10.60 213 270 1.9E-15 T 11-10-2018 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 SUPERFAMILY SSF46689 273 322 2.64E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 SUPERFAMILY SSF46689 220 271 3.76E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 Gene3D G3DSA:1.10.10.60 271 323 3.6E-13 T 11-10-2018 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 Pfam PF12833 Helix-turn-helix domain 243 320 1.0E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_25670 a52cb714dffcae87db326da0c5d883c8 323 SMART SM00342 237 320 8.2E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_09085 95b6ec9c5a09686825db4f31db4a97ca 156 SUPERFAMILY SSF88697 1 149 1.7E-62 T 11-10-2018 IPR015947 PUA-like superfamily AL538_09085 95b6ec9c5a09686825db4f31db4a97ca 156 Gene3D G3DSA:3.10.590.10 1 153 1.9E-65 T 11-10-2018 AL538_09085 95b6ec9c5a09686825db4f31db4a97ca 156 Pfam PF01878 EVE domain 2 147 1.9E-55 T 11-10-2018 IPR002740 EVE domain AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 Gene3D G3DSA:2.10.70.20 164 212 1.9E-15 T 11-10-2018 AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 Pfam PF11612 Type II secretion system (T2SS), protein J 70 207 1.9E-39 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 Gene3D G3DSA:3.10.610.10 49 162 1.7E-36 T 11-10-2018 AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 40 7.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 18 209 1.9E-80 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 40 5.7E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10285 3cf7557f106ec3aefdf87178258f135f 239 SUPERFAMILY SSF54523 53 214 5.1E-56 T 11-10-2018 AL538_07670 cb77983665c6891223fd645aee107e4d 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 6 221 1.3E-53 T 11-10-2018 IPR026387 Outer membrane protein AL538_06280 617a770c4884e538bf7a4c3aca23fd7d 361 Pfam PF01594 AI-2E family transporter 14 347 4.6E-53 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL538_15790 75c08e09d687daef52b6d5f6de5636bb 533 Pfam PF03553 Na+/H+ antiporter family 165 497 4.7E-107 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL538_08830 42a45d698ba21b798cc4bc2053c64bd9 407 Gene3D G3DSA:3.30.460.10 100 220 1.4E-20 T 11-10-2018 AL538_08830 42a45d698ba21b798cc4bc2053c64bd9 407 Pfam PF04607 Region found in RelA / SpoT proteins 111 228 2.1E-14 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_08830 42a45d698ba21b798cc4bc2053c64bd9 407 SMART SM00954 111 239 1.4E-16 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AL538_08830 42a45d698ba21b798cc4bc2053c64bd9 407 SUPERFAMILY SSF81301 78 230 7.36E-23 T 11-10-2018 AL538_15140 989215f5a451531e39a602b70fcefbc4 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 8.3E-25 T 11-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AL538_15140 989215f5a451531e39a602b70fcefbc4 82 SUPERFAMILY SSF140129 3 78 3.01E-23 T 11-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 AL538_15140 989215f5a451531e39a602b70fcefbc4 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 2.7E-20 T 11-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AL538_15140 989215f5a451531e39a602b70fcefbc4 82 Gene3D G3DSA:1.20.58.90 1 82 6.9E-12 T 11-10-2018 AL538_14830 07466773f1be204dc6760fa5f93cd1ce 215 Gene3D G3DSA:1.20.1280.20 129 214 4.0E-24 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AL538_14830 07466773f1be204dc6760fa5f93cd1ce 215 SUPERFAMILY SSF89155 8 212 3.66E-52 T 11-10-2018 IPR036411 TorD-like superfamily AL538_14830 07466773f1be204dc6760fa5f93cd1ce 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.614 T 11-10-2018 IPR023069 Chaperone TorD AL538_14830 07466773f1be204dc6760fa5f93cd1ce 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 4.6E-39 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AL538_14830 07466773f1be204dc6760fa5f93cd1ce 215 Gene3D G3DSA:1.20.120.1820 3 126 4.4E-39 T 11-10-2018 AL538_20095 2379d857c0daeab855227b6c9fb31778 144 SUPERFAMILY SSF103481 69 143 5.62E-17 T 11-10-2018 AL538_20095 2379d857c0daeab855227b6c9fb31778 144 Pfam PF00892 EamA-like transporter family 5 140 7.7E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 Gene3D G3DSA:2.60.40.380 30 128 1.6E-30 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 Gene3D G3DSA:3.60.21.70 129 556 3.8E-121 T 11-10-2018 IPR038607 PhoD-like superfamily AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 Pfam PF09423 PhoD-like phosphatase 137 529 6.0E-117 T 11-10-2018 IPR018946 Alkaline phosphatase D-related AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 40 126 1.2E-27 T 11-10-2018 IPR032093 Phospholipase D, N-terminal AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 3.4E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_16445 a1bbbf7a7e9c11558d6868bf8902680b 558 SUPERFAMILY SSF56300 136 533 4.75E-32 T 11-10-2018 AL538_06215 7890836249fe83a53afc35112293551a 662 SUPERFAMILY SSF140990 406 601 1.83E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL538_06215 7890836249fe83a53afc35112293551a 662 Gene3D G3DSA:1.20.58.760 406 608 1.6E-72 T 11-10-2018 AL538_06215 7890836249fe83a53afc35112293551a 662 Gene3D G3DSA:3.40.50.300 140 326 3.0E-70 T 11-10-2018 AL538_06215 7890836249fe83a53afc35112293551a 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 5.4E-243 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL538_06215 7890836249fe83a53afc35112293551a 662 Gene3D G3DSA:1.10.8.60 327 403 2.1E-27 T 11-10-2018 AL538_06215 7890836249fe83a53afc35112293551a 662 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AL538_06215 7890836249fe83a53afc35112293551a 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.3E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_06215 7890836249fe83a53afc35112293551a 662 SMART SM00382 188 327 5.1E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06215 7890836249fe83a53afc35112293551a 662 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AL538_06215 7890836249fe83a53afc35112293551a 662 SUPERFAMILY SSF52540 147 395 9.77E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06215 7890836249fe83a53afc35112293551a 662 Pfam PF01434 Peptidase family M41 386 595 1.4E-81 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AL538_06215 7890836249fe83a53afc35112293551a 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 621 37.311 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AL538_06215 7890836249fe83a53afc35112293551a 662 Gene3D G3DSA:2.40.50.920 27 103 3.5E-29 T 11-10-2018 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 SUPERFAMILY SSF46785 10 156 1.69E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 SMART SM00347 42 145 1.6E-31 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.8E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.8E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.8E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.8E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 Pfam PF01047 MarR family 50 110 9.3E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_01050 a1287e5d62b80ccc8417225a71b5f68a 160 Gene3D G3DSA:1.10.10.10 1 159 3.0E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Pfam PF00579 tRNA synthetases class I (W and Y) 29 323 5.2E-83 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 48 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 414 2.4E-125 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Gene3D G3DSA:3.10.290.10 326 417 2.3E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 SUPERFAMILY SSF55174 321 414 3.4E-15 T 11-10-2018 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Gene3D G3DSA:1.10.240.10 223 325 1.8E-36 T 11-10-2018 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 415 44.236 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 8.3E-32 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 8.3E-32 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 8.3E-32 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 42 64 8.3E-32 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Gene3D G3DSA:3.40.50.620 1 222 3.4E-90 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 SUPERFAMILY SSF52374 2 323 3.43E-100 T 11-10-2018 AL538_21765 aca963e2aa5bc43947528d5e415094e6 418 Pfam PF01479 S4 domain 353 386 4.0E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_03685 919f86db4827e35dcfda527bd444a53b 189 Gene3D G3DSA:3.40.50.10610 16 189 4.7E-11 T 11-10-2018 AL538_03685 919f86db4827e35dcfda527bd444a53b 189 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 186 6.4E-36 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AL538_03685 919f86db4827e35dcfda527bd444a53b 189 SUPERFAMILY SSF159594 25 189 1.8E-27 T 11-10-2018 AL538_12380 a7b72f6069c543b0b6db03029524f56e 64 SUPERFAMILY SSF140319 1 62 2.09E-28 T 11-10-2018 IPR036762 IscX-like superfamily AL538_12380 a7b72f6069c543b0b6db03029524f56e 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.2E-34 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL538_12380 a7b72f6069c543b0b6db03029524f56e 64 Gene3D G3DSA:1.10.10.600 1 64 1.4E-29 T 11-10-2018 IPR036762 IscX-like superfamily AL538_12380 a7b72f6069c543b0b6db03029524f56e 64 PIRSF PIRSF039003 1 64 5.0E-34 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL538_12380 a7b72f6069c543b0b6db03029524f56e 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.2E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AL538_10905 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10905 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10905 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 11-10-2018 AL538_10905 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10905 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 11-10-2018 AL538_26545 8f83cc1d36703883e93e6b3d6c3bf07e 456 SMART SM00729 62 285 1.1E-41 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_26545 8f83cc1d36703883e93e6b3d6c3bf07e 456 Pfam PF04055 Radical SAM superfamily 67 236 2.6E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_26545 8f83cc1d36703883e93e6b3d6c3bf07e 456 SUPERFAMILY SSF102114 59 439 7.06E-83 T 11-10-2018 AL538_26545 8f83cc1d36703883e93e6b3d6c3bf07e 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 2.2E-180 T 11-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW AL538_26545 8f83cc1d36703883e93e6b3d6c3bf07e 456 Gene3D G3DSA:3.80.30.20 36 364 2.7E-73 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_21860 d80985fea538497799ae21a707d1486e 305 SUPERFAMILY SSF53850 87 302 1.41E-39 T 11-10-2018 AL538_21860 d80985fea538497799ae21a707d1486e 305 SUPERFAMILY SSF46785 4 112 5.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21860 d80985fea538497799ae21a707d1486e 305 Gene3D G3DSA:3.40.190.10 163 272 4.7E-65 T 11-10-2018 AL538_21860 d80985fea538497799ae21a707d1486e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21860 d80985fea538497799ae21a707d1486e 305 Gene3D G3DSA:3.40.190.10 92 299 4.7E-65 T 11-10-2018 AL538_21860 d80985fea538497799ae21a707d1486e 305 Gene3D G3DSA:1.10.10.10 3 91 3.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21860 d80985fea538497799ae21a707d1486e 305 Pfam PF03466 LysR substrate binding domain 89 301 1.0E-42 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 Gene3D G3DSA:3.40.190.290 96 283 6.8E-10 T 11-10-2018 AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 SUPERFAMILY SSF53850 122 289 1.14E-18 T 11-10-2018 AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 Gene3D G3DSA:1.10.10.10 5 90 7.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 Pfam PF03466 LysR substrate binding domain 124 291 2.8E-14 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_24255 3b4958a8565e267adb5a5859ec743f13 295 SUPERFAMILY SSF46785 6 86 4.09E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_04000 b5ae927afa55902a28a5b80fe9273e08 202 Pfam PF02810 SEC-C motif 184 202 1.1E-9 T 11-10-2018 IPR004027 SEC-C motif AL538_04000 b5ae927afa55902a28a5b80fe9273e08 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 19 148 6.5E-8 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL538_04000 b5ae927afa55902a28a5b80fe9273e08 202 SUPERFAMILY SSF103642 182 201 1.8E-7 T 11-10-2018 AL538_04000 b5ae927afa55902a28a5b80fe9273e08 202 Gene3D G3DSA:3.10.450.50 159 202 8.1E-9 T 11-10-2018 AL538_17095 dff78462923e374684227428acde4506 5384 Pfam PF13519 von Willebrand factor type A domain 4900 5013 1.4E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17095 dff78462923e374684227428acde4506 5384 PRINTS PR00313 NodO calcium binding signature 5254 5262 2.7E-7 T 11-10-2018 AL538_17095 dff78462923e374684227428acde4506 5384 PRINTS PR00313 NodO calcium binding signature 5233 5244 2.7E-7 T 11-10-2018 AL538_17095 dff78462923e374684227428acde4506 5384 PRINTS PR00313 NodO calcium binding signature 5263 5271 2.7E-7 T 11-10-2018 AL538_17095 dff78462923e374684227428acde4506 5384 PRINTS PR00313 NodO calcium binding signature 5272 5281 2.7E-7 T 11-10-2018 AL538_17095 dff78462923e374684227428acde4506 5384 Gene3D G3DSA:2.150.10.10 5233 5373 3.0E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_17095 dff78462923e374684227428acde4506 5384 Gene3D G3DSA:2.150.10.10 4626 4761 8.8E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_17095 dff78462923e374684227428acde4506 5384 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5241 5259 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_17095 dff78462923e374684227428acde4506 5384 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5259 5277 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_17095 dff78462923e374684227428acde4506 5384 SUPERFAMILY SSF51120 5160 5317 7.72E-21 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_17095 dff78462923e374684227428acde4506 5384 SMART SM00327 4897 5151 6.9E-4 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17095 dff78462923e374684227428acde4506 5384 SUPERFAMILY SSF53300 4860 5129 5.09E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_17095 dff78462923e374684227428acde4506 5384 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5250 5268 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_28380 cdaf234e3f59de29fb7a32cd912d9eaa 714 SUPERFAMILY SSF53474 279 473 2.79E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_28380 cdaf234e3f59de29fb7a32cd912d9eaa 714 Gene3D G3DSA:3.40.50.1820 314 501 3.3E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_28380 cdaf234e3f59de29fb7a32cd912d9eaa 714 Pfam PF01764 Lipase (class 3) 352 471 1.1E-22 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL538_03135 29ca18d937075ac291795665a72bddad 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 4.2E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_03135 29ca18d937075ac291795665a72bddad 218 Gene3D G3DSA:3.60.15.10 3 213 5.7E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_03135 29ca18d937075ac291795665a72bddad 218 SUPERFAMILY SSF56281 5 211 2.98E-53 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_03135 29ca18d937075ac291795665a72bddad 218 SMART SM00849 14 195 1.4E-37 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_27990 9871675bf2db083f4d6fc1817329e971 305 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 254 259 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL538_27990 9871675bf2db083f4d6fc1817329e971 305 SUPERFAMILY SSF102712 191 271 1.31E-6 T 11-10-2018 AL538_27990 9871675bf2db083f4d6fc1817329e971 305 Gene3D G3DSA:3.40.140.10 182 305 3.5E-40 T 11-10-2018 AL538_27990 9871675bf2db083f4d6fc1817329e971 305 TIGRFAM TIGR00608 radc: DNA repair protein RadC 175 305 1.3E-43 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL538_27990 9871675bf2db083f4d6fc1817329e971 305 Pfam PF04002 RadC-like JAB domain 185 303 3.9E-41 T 11-10-2018 IPR025657 RadC-like JAB domain AL538_05650 481204e63331af68281f8b1c4f02f019 198 PIRSF PIRSF006102 1 198 4.9E-66 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_05650 481204e63331af68281f8b1c4f02f019 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.6E-108 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL538_05650 481204e63331af68281f8b1c4f02f019 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.4E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_05650 481204e63331af68281f8b1c4f02f019 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AL538_11415 38902f7cd2ba661af3e21e634bf81b72 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.546 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL538_11415 38902f7cd2ba661af3e21e634bf81b72 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.8E-73 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL538_11415 38902f7cd2ba661af3e21e634bf81b72 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.3E-82 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 SUPERFAMILY SSF53850 92 289 3.98E-22 T 11-10-2018 AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 Pfam PF03466 LysR substrate binding domain 110 287 1.4E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 Gene3D G3DSA:1.10.10.10 1 88 8.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 Gene3D G3DSA:3.40.190.290 93 282 2.9E-35 T 11-10-2018 AL538_22940 9c4d753814d50fd2efaad70c736e254c 292 SUPERFAMILY SSF46785 1 87 3.52E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05670 155e9eb8944f4a40514c0c16b835b59c 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.243 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL538_05670 155e9eb8944f4a40514c0c16b835b59c 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 9.3E-203 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL538_05670 155e9eb8944f4a40514c0c16b835b59c 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 3.2E-114 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AL538_05670 155e9eb8944f4a40514c0c16b835b59c 446 Pfam PF11973 NQRA C-terminal domain 261 310 7.2E-21 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AL538_23740 5da7bb16c9f07dca5bafd5ed35ae5a1e 104 Gene3D G3DSA:1.10.3730.20 1 104 1.9E-31 T 11-10-2018 AL538_23740 5da7bb16c9f07dca5bafd5ed35ae5a1e 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.8E-28 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL538_23740 5da7bb16c9f07dca5bafd5ed35ae5a1e 104 SUPERFAMILY SSF103481 6 102 1.96E-18 T 11-10-2018 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 Gene3D G3DSA:1.10.10.10 5 94 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 SUPERFAMILY SSF46785 6 87 1.56E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 SUPERFAMILY SSF53850 90 297 9.15E-38 T 11-10-2018 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 Gene3D G3DSA:3.40.190.290 95 295 4.2E-55 T 11-10-2018 AL538_03670 eb5e0aa5fc53e905691a4975d467286d 301 Pfam PF03466 LysR substrate binding domain 91 295 1.6E-34 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_09095 b196a63779ff668fee19e8bf7a0f9b8a 198 Pfam PF03942 DTW domain 3 183 2.7E-44 T 11-10-2018 IPR005636 DTW AL538_09095 b196a63779ff668fee19e8bf7a0f9b8a 198 SMART SM01144 1 192 6.7E-55 T 11-10-2018 IPR005636 DTW AL538_25995 3f8ee5b9171bcf0b1b4428ffb167ba36 300 Pfam PF00482 Type II secretion system (T2SS), protein F 132 256 3.0E-17 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_20925 9ee7366be47dabe3766d7f032ef34f4c 183 Gene3D G3DSA:2.40.160.20 21 183 3.0E-16 T 11-10-2018 AL538_20925 9ee7366be47dabe3766d7f032ef34f4c 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 2.3E-11 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_20925 9ee7366be47dabe3766d7f032ef34f4c 183 SUPERFAMILY SSF56925 22 183 6.54E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_11200 6c761ab58d2c87db4115259b9332135f 332 SUPERFAMILY SSF53659 6 330 1.12E-109 T 11-10-2018 AL538_11200 6c761ab58d2c87db4115259b9332135f 332 Gene3D G3DSA:3.40.718.10 1 332 9.2E-121 T 11-10-2018 AL538_11200 6c761ab58d2c87db4115259b9332135f 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.187 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AL538_11200 6c761ab58d2c87db4115259b9332135f 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 3.3E-126 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AL538_11200 6c761ab58d2c87db4115259b9332135f 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 1.9E-105 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AL538_04025 d43ecd9981bd725a00b5d4f12ec89b83 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 5.8E-27 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 AL538_03120 63ea5ec544de3efdfc16abd6417efec3 364 PIRSF PIRSF039026 4 363 5.6E-141 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL538_03120 63ea5ec544de3efdfc16abd6417efec3 364 Gene3D G3DSA:3.40.190.10 157 328 1.8E-117 T 11-10-2018 AL538_03120 63ea5ec544de3efdfc16abd6417efec3 364 Gene3D G3DSA:3.40.190.170 39 349 1.8E-117 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL538_03120 63ea5ec544de3efdfc16abd6417efec3 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 328 1.3E-71 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.642 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 3.5E-167 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 Gene3D G3DSA:3.40.50.2000 8 481 2.6E-157 T 11-10-2018 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 Pfam PF08323 Starch synthase catalytic domain 8 239 1.6E-67 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 Pfam PF00534 Glycosyl transferases group 1 303 446 3.0E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 SUPERFAMILY SSF53756 4 485 1.57E-109 T 11-10-2018 AL538_14800 b8df2b87cb848cea5bcc6cf41e88a9b9 485 Gene3D G3DSA:3.40.50.2000 256 467 2.6E-157 T 11-10-2018 AL538_13550 272fbffe3cfc6d6cc60fa83d916f9b9b 153 SUPERFAMILY SSF141322 113 151 2.09E-5 T 11-10-2018 AL538_13550 272fbffe3cfc6d6cc60fa83d916f9b9b 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 151 4.7E-25 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AL538_13550 272fbffe3cfc6d6cc60fa83d916f9b9b 153 Gene3D G3DSA:2.40.50.140 82 153 4.8E-9 T 11-10-2018 AL538_14590 6b7e93345d78058f5dfff71becb82209 414 Pfam PF02687 FtsX-like permease family 301 407 6.7E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_14590 6b7e93345d78058f5dfff71becb82209 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 1.8E-159 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL538_14590 6b7e93345d78058f5dfff71becb82209 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.8E-215 T 11-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 AL538_14590 6b7e93345d78058f5dfff71becb82209 414 Pfam PF12704 MacB-like periplasmic core domain 30 222 4.3E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.5E-40 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.884 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 PIRSF PIRSF002161 1 179 4.4E-66 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 Gene3D G3DSA:3.30.1440.10 1 179 1.4E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10885 68ddb5476535fc474d5d6280c2b86647 179 SUPERFAMILY SSF55282 4 179 2.83E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SUPERFAMILY SSF56112 197 369 3.42E-24 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 211 238 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Pfam PF13855 Leucine rich repeat 107 164 3.8E-8 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Pfam PF13855 Leucine rich repeat 39 94 2.3E-6 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Gene3D G3DSA:3.80.10.10 7 101 4.4E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Gene3D G3DSA:3.80.10.10 102 193 8.0E-19 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Gene3D G3DSA:1.10.510.10 305 383 1.3E-9 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Pfam PF00069 Protein kinase domain 205 367 7.3E-16 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00369 40 59 52.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00369 60 83 11.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00369 151 174 21.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00369 129 150 200.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00369 106 128 67.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SUPERFAMILY SSF52075 39 208 2.48E-34 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 Gene3D G3DSA:3.30.200.20 194 286 2.2E-9 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00220 205 409 4.5E-6 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00364 151 170 300.0 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00364 37 56 72.0 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00364 105 124 36.0 T 11-10-2018 AL538_03520 f9af97ca0571c7a9502b8e4713ab8c42 419 SMART SM00364 60 79 21.0 T 11-10-2018 AL538_03805 a1f1bcf1c99896f22bc0e1041e17f116 230 Gene3D G3DSA:3.40.50.300 52 158 2.1E-27 T 11-10-2018 AL538_03805 a1f1bcf1c99896f22bc0e1041e17f116 230 Pfam PF00154 recA bacterial DNA recombination protein 30 125 1.4E-4 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AL538_03805 a1f1bcf1c99896f22bc0e1041e17f116 230 SUPERFAMILY SSF52540 56 159 9.14E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03805 a1f1bcf1c99896f22bc0e1041e17f116 230 PIRSF PIRSF037290 1 230 8.3E-76 T 11-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PIRSF PIRSF000102 1 317 1.4E-87 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.2E-22 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.2E-22 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.2E-22 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.2E-22 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.2E-22 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 Gene3D G3DSA:3.40.50.720 1 144 1.1E-39 T 11-10-2018 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 2.6E-32 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 SUPERFAMILY SSF56327 143 308 2.31E-40 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.2E-20 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AL538_20450 f8a696759e34ee573c5625932b64a46e 317 SUPERFAMILY SSF51735 2 144 1.93E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_20450 f8a696759e34ee573c5625932b64a46e 317 Gene3D G3DSA:3.90.110.10 145 314 3.2E-43 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AL538_27810 3ab7ab7d9d951f03c519336b01e67391 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 8.9E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_15020 8751ce16ec0465a32d8c43c28dd7d3a2 225 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_15020 8751ce16ec0465a32d8c43c28dd7d3a2 225 Gene3D G3DSA:3.20.20.70 1 220 8.9E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15020 8751ce16ec0465a32d8c43c28dd7d3a2 225 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 201 1.4E-50 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_15020 8751ce16ec0465a32d8c43c28dd7d3a2 225 SUPERFAMILY SSF51569 1 215 8.06E-67 T 11-10-2018 AL538_15020 8751ce16ec0465a32d8c43c28dd7d3a2 225 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 SUPERFAMILY SSF46785 5 87 2.37E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 3.1E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 Gene3D G3DSA:1.10.10.10 4 101 5.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 SMART SM00418 5 83 1.3E-26 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 9.9E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 9.9E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 9.9E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_09060 9920f8ba1bc88e5749c32977e3c8cdcb 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 9.9E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_24020 cfacad76081a25bfea6b4ebb392010e7 169 Gene3D G3DSA:3.40.630.30 2 147 3.4E-6 T 11-10-2018 AL538_02380 0df6bdd6b91673dfbfd05127d3a7ebb1 240 Pfam PF01844 HNH endonuclease 157 211 7.4E-7 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL538_20880 37205b09351b4e4c14488243c60367db 342 SUPERFAMILY SSF53822 70 332 8.35E-48 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_20880 37205b09351b4e4c14488243c60367db 342 Pfam PF13377 Periplasmic binding protein-like domain 180 339 5.1E-24 T 11-10-2018 AL538_20880 37205b09351b4e4c14488243c60367db 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.6E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_20880 37205b09351b4e4c14488243c60367db 342 SUPERFAMILY SSF47413 12 70 4.59E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_20880 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:3.40.50.2300 74 318 7.7E-79 T 11-10-2018 AL538_20880 37205b09351b4e4c14488243c60367db 342 SMART SM00354 12 82 1.3E-27 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_20880 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:1.10.260.40 5 70 3.8E-22 T 11-10-2018 AL538_20880 37205b09351b4e4c14488243c60367db 342 Gene3D G3DSA:3.40.50.2300 168 301 7.7E-79 T 11-10-2018 AL538_20880 37205b09351b4e4c14488243c60367db 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 11-10-2018 AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 3.1E-36 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.134 T 11-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 Pfam PF02082 Transcriptional regulator 1 82 6.4E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 Gene3D G3DSA:1.10.10.10 1 136 5.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08055 fb1f36848c013896f6b017e75bcab45a 141 SUPERFAMILY SSF46785 2 131 9.75E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_10830 f37197775e20ab8fed48a8bcbd919079 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.3E-64 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AL538_10830 f37197775e20ab8fed48a8bcbd919079 200 Gene3D G3DSA:3.40.1370.10 5 200 2.2E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10830 f37197775e20ab8fed48a8bcbd919079 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 1.2E-75 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10830 f37197775e20ab8fed48a8bcbd919079 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.703 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10830 f37197775e20ab8fed48a8bcbd919079 200 SUPERFAMILY SSF52166 9 199 1.23E-72 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AL538_17030 b202439e10f4b071501fb324962113db 867 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 865 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AL538_17030 b202439e10f4b071501fb324962113db 867 Gene3D G3DSA:3.20.19.10 626 865 2.3E-83 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 32 863 8.9E-292 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AL538_17030 b202439e10f4b071501fb324962113db 867 SUPERFAMILY SSF53732 13 597 1.31E-187 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 2.5E-145 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 Pfam PF00694 Aconitase C-terminal domain 664 795 2.7E-30 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 Gene3D G3DSA:1.10.1440.20 566 620 5.6E-9 T 11-10-2018 AL538_17030 b202439e10f4b071501fb324962113db 867 Gene3D G3DSA:3.30.499.10 365 565 3.0E-78 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 209 224 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 285 298 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 195 208 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 406 417 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 271 284 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 142 155 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 166 174 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 364 378 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 PRINTS PR00415 Aconitase family signature 468 481 4.9E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AL538_17030 b202439e10f4b071501fb324962113db 867 Gene3D G3DSA:3.30.499.20 9 363 7.5E-132 T 11-10-2018 AL538_17030 b202439e10f4b071501fb324962113db 867 SUPERFAMILY SSF52016 602 864 2.94E-68 T 11-10-2018 AL538_01135 a0215c5b9468d9b6a544a415b7167bdd 447 Pfam PF00263 Bacterial type II and III secretion system protein 247 402 1.6E-42 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AL538_01135 a0215c5b9468d9b6a544a415b7167bdd 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 189 199 3.8E-6 T 11-10-2018 IPR001775 GspD/PilQ family AL538_01135 a0215c5b9468d9b6a544a415b7167bdd 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 367 385 3.8E-6 T 11-10-2018 IPR001775 GspD/PilQ family AL538_01135 a0215c5b9468d9b6a544a415b7167bdd 447 Pfam PF13629 Pilus formation protein N terminal region 26 94 1.9E-16 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-87 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.8E-77 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 SUPERFAMILY SSF51351 2 250 1.06E-88 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.194 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AL538_10745 8cab053501c70e01106c6cfad6ee03aa 256 Gene3D G3DSA:3.20.20.70 1 256 1.1E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 3.2E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 335 3.5E-46 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL538_17675 67deec07db5b7d4f27951abc6260c059 340 SMART SM00354 5 75 6.4E-35 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 SUPERFAMILY SSF47413 4 63 2.82E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 Gene3D G3DSA:1.10.260.40 3 63 1.3E-21 T 11-10-2018 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 Gene3D G3DSA:3.40.50.2300 66 332 1.0E-74 T 11-10-2018 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 SUPERFAMILY SSF53822 65 339 4.71E-68 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_17675 67deec07db5b7d4f27951abc6260c059 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 11-10-2018 AL538_17675 67deec07db5b7d4f27951abc6260c059 340 Gene3D G3DSA:3.40.50.2300 165 337 1.0E-74 T 11-10-2018 AL538_12440 ed6d96943e51dbaa080f7079f2a74708 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.33 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL538_12440 ed6d96943e51dbaa080f7079f2a74708 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 5.1E-103 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AL538_12440 ed6d96943e51dbaa080f7079f2a74708 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AL538_12440 ed6d96943e51dbaa080f7079f2a74708 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 1.0E-134 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 PIRSF PIRSF006485 1 473 1.1E-178 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.6E-25 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AL538_12425 663fccae831b5b1a3073026ba73ed791 498 SUPERFAMILY SSF52540 4 164 2.59E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.183 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 SMART SM00382 1 174 1.8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12425 663fccae831b5b1a3073026ba73ed791 498 SMART SM00382 208 355 0.1 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12425 663fccae831b5b1a3073026ba73ed791 498 SUPERFAMILY SSF52540 140 471 3.22E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Gene3D G3DSA:3.30.300.20 385 467 5.7E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_12425 663fccae831b5b1a3073026ba73ed791 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 8.6E-178 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Gene3D G3DSA:3.40.50.300 204 382 5.0E-50 T 11-10-2018 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Gene3D G3DSA:3.40.50.300 2 160 1.1E-42 T 11-10-2018 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 1.1E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 9.2E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.0E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_12425 663fccae831b5b1a3073026ba73ed791 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.3E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_06245 961f41f965962f21569b84d763ece86c 316 Pfam PF01769 Divalent cation transporter 177 306 7.7E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AL538_06245 961f41f965962f21569b84d763ece86c 316 Gene3D G3DSA:1.10.357.20 129 313 2.2E-53 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AL538_06245 961f41f965962f21569b84d763ece86c 316 SUPERFAMILY SSF161093 134 313 9.81E-45 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 SMART SM00283 324 585 2.4E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 Gene3D G3DSA:1.10.287.950 255 587 2.3E-65 T 11-10-2018 AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 SMART SM00304 256 309 0.0039 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 SMART SM01358 25 271 2.5E-4 T 11-10-2018 IPR032255 Helical bimodular sensor domain AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 551 3.4E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_22725 63e63895ff375977b29c8b77ebd544dd 589 SUPERFAMILY SSF58104 279 586 1.48E-69 T 11-10-2018 AL538_27840 2bd291aee9b7392e45b0b753033a201a 153 Gene3D G3DSA:3.30.40.60 48 152 8.7E-9 T 11-10-2018 AL538_27840 2bd291aee9b7392e45b0b753033a201a 153 SMART SM00507 73 132 2.0E-6 T 11-10-2018 IPR003615 HNH nuclease AL538_27840 2bd291aee9b7392e45b0b753033a201a 153 Pfam PF01844 HNH endonuclease 86 135 1.3E-11 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AL538_14085 7a3440d48253e788f888f2019a761d34 446 Gene3D G3DSA:3.40.50.12780 2 306 5.0E-25 T 11-10-2018 AL538_14085 7a3440d48253e788f888f2019a761d34 446 SUPERFAMILY SSF56801 8 446 1.83E-57 T 11-10-2018 AL538_14085 7a3440d48253e788f888f2019a761d34 446 Pfam PF00501 AMP-binding enzyme 128 279 3.0E-12 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_14085 7a3440d48253e788f888f2019a761d34 446 Gene3D G3DSA:3.30.300.30 336 442 5.8E-17 T 11-10-2018 AL538_14085 7a3440d48253e788f888f2019a761d34 446 Pfam PF13193 AMP-binding enzyme C-terminal domain 351 434 7.9E-8 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 SUPERFAMILY SSF55021 90 176 9.58E-21 T 11-10-2018 AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 PIRSF PIRSF028103 1 178 4.5E-68 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 Gene3D G3DSA:3.30.70.260 1 85 1.1E-24 T 11-10-2018 AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 Pfam PF13740 ACT domain 3 78 4.2E-23 T 11-10-2018 AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 SUPERFAMILY SSF55021 1 82 8.33E-18 T 11-10-2018 AL538_05250 123cff8c759860f28a2f4ae85d8f81d0 180 Gene3D G3DSA:3.30.70.260 87 180 1.6E-40 T 11-10-2018 AL538_00790 f83734d414064f01b00970edfb1e921d 395 SMART SM00897 27 224 1.5E-34 T 11-10-2018 IPR013702 FIST domain, N-terminal AL538_00790 f83734d414064f01b00970edfb1e921d 395 Pfam PF08495 FIST N domain 32 223 6.7E-25 T 11-10-2018 IPR013702 FIST domain, N-terminal AL538_00790 f83734d414064f01b00970edfb1e921d 395 Pfam PF10442 FIST C domain 225 371 3.4E-20 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_00790 f83734d414064f01b00970edfb1e921d 395 SMART SM01204 225 372 3.3E-33 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:1.10.287.470 67 86 2.4E-6 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:2.40.50.100 32 66 2.4E-6 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 SUPERFAMILY SSF111369 100 157 1.44E-6 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:2.40.30.170 231 307 6.5E-9 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Pfam PF13437 HlyD family secretion protein 195 274 8.9E-8 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:1.10.287.470 168 195 6.5E-9 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 SUPERFAMILY SSF111369 34 87 8.63E-5 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:1.10.287.470 97 162 1.9E-11 T 11-10-2018 AL538_26585 9fa5f005f4c8d8ce7e8b96b7a3ec4774 315 Gene3D G3DSA:2.40.50.100 196 230 6.5E-9 T 11-10-2018 AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 150 3.5E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 SUPERFAMILY SSF88946 6 86 4.32E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 Gene3D G3DSA:1.10.10.10 97 154 4.8E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 5 170 2.2E-56 T 11-10-2018 IPR014304 RNA polymerase sigma-Z type AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 Pfam PF08281 Sigma-70, region 4 98 148 4.9E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 Pfam PF04542 Sigma-70 region 2 7 71 2.7E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 SUPERFAMILY SSF88659 87 154 4.11E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_19825 5b8cb24c77e13f1144bda2e18133ce03 186 Gene3D G3DSA:1.10.1740.10 2 73 4.7E-19 T 11-10-2018 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 SUPERFAMILY SSF102886 5 305 7.32E-138 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 Gene3D G3DSA:3.40.1500.10 1 305 4.9E-138 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.787 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 4.9E-132 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 129 151 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 266 292 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 31 47 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 238 265 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 94 118 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PRINTS PR00073 Coprogen oxidase signature 166 195 2.9E-70 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_09415 8b4e12ddae33a53e4d6510797edb9adc 305 PIRSF PIRSF000166 2 305 5.1E-129 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AL538_26925 2d4dad917b36c641a933cd937dee06c5 186 SUPERFAMILY SSF51161 7 137 2.57E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_26925 2d4dad917b36c641a933cd937dee06c5 186 Gene3D G3DSA:2.160.10.10 1 183 7.5E-49 T 11-10-2018 AL538_26925 2d4dad917b36c641a933cd937dee06c5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 44 1.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_26925 2d4dad917b36c641a933cd937dee06c5 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 112 1.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_26985 79b4b7241f9679568e7dd4c0283e3219 329 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 243 3.9E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_26985 79b4b7241f9679568e7dd4c0283e3219 329 Gene3D G3DSA:1.10.287.470 97 165 2.3E-23 T 11-10-2018 AL538_26985 79b4b7241f9679568e7dd4c0283e3219 329 SUPERFAMILY SSF111369 74 214 3.4E-9 T 11-10-2018 AL538_26985 79b4b7241f9679568e7dd4c0283e3219 329 Gene3D G3DSA:2.40.30.170 203 250 2.3E-23 T 11-10-2018 AL538_26985 79b4b7241f9679568e7dd4c0283e3219 329 Gene3D G3DSA:2.40.50.100 67 202 2.3E-23 T 11-10-2018 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 PIRSF PIRSF002158 13 274 5.6E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 SMART SM01382 124 252 5.1E-92 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.435 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 8.2E-131 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-32 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 SUPERFAMILY SSF50249 2 125 1.85E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 SMART SM01383 42 118 2.1E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10840 bb65774e16b5fc523f34355aca3a0964 274 Gene3D G3DSA:2.40.50.140 1 114 2.4E-50 T 11-10-2018 AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 PIRSF PIRSF006728 1 391 4.3E-111 T 11-10-2018 IPR008135 Competence-induced protein CinA AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 9.6E-77 T 11-10-2018 IPR008135 Competence-induced protein CinA AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.733 T 11-10-2018 IPR008135 Competence-induced protein CinA AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 SMART SM00852 4 171 5.6E-30 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 SUPERFAMILY SSF142433 252 386 3.4E-7 T 11-10-2018 IPR036653 CinA-like, C-terminal AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 SUPERFAMILY SSF53218 2 202 9.82E-34 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 Gene3D G3DSA:3.40.980.10 1 171 2.4E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AL538_03255 ed2fa7312a9f61a9b315377124b727ed 410 Pfam PF00994 Probable molybdopterin binding domain 4 170 4.0E-28 T 11-10-2018 IPR001453 MoaB/Mog domain AL538_17310 dc218998b2784b05744cdd084bf0023e 713 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 713 3.3E-123 T 11-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 AL538_17310 dc218998b2784b05744cdd084bf0023e 713 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 713 6.4E-117 T 11-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 AL538_17310 dc218998b2784b05744cdd084bf0023e 713 Gene3D G3DSA:2.40.170.20 166 713 2.6E-81 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_17310 dc218998b2784b05744cdd084bf0023e 713 Gene3D G3DSA:2.170.130.10 28 155 7.7E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_17310 dc218998b2784b05744cdd084bf0023e 713 SUPERFAMILY SSF56935 22 713 1.05E-112 T 11-10-2018 AL538_17310 dc218998b2784b05744cdd084bf0023e 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 1.4E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_17310 dc218998b2784b05744cdd084bf0023e 713 Pfam PF00593 TonB dependent receptor 342 711 3.8E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 SUPERFAMILY SSF51161 8 258 7.37E-63 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 6.0E-37 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:1.10.3130.10 1 142 2.9E-52 T 11-10-2018 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 75 266 3.7E-55 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 PIRSF PIRSF000441 7 84 66.0 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 Gene3D G3DSA:2.160.10.10 143 273 4.0E-37 T 11-10-2018 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 SMART SM00971 9 113 4.4E-58 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL538_08235 d5d235b9c95588bf74ce0f6a8903c8a9 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.3E-74 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AL538_05730 75384cc3ae100537fc91400c3cfcc30b 199 Pfam PF01965 DJ-1/PfpI family 3 169 4.5E-41 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AL538_05730 75384cc3ae100537fc91400c3cfcc30b 199 Gene3D G3DSA:3.40.50.880 1 193 3.5E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_05730 75384cc3ae100537fc91400c3cfcc30b 199 SUPERFAMILY SSF52317 3 190 8.52E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_05730 75384cc3ae100537fc91400c3cfcc30b 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 3.5E-63 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 PIRSF PIRSF009393 1 726 1.4E-286 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF55904 578 725 6.28E-44 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.100.10 608 726 6.6E-41 T 11-10-2018 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 4.1E-187 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 11-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.640.10 117 427 1.2E-83 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF52172 1 116 2.29E-24 T 11-10-2018 IPR011006 CheY-like superfamily AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 SUPERFAMILY SSF53383 117 574 6.38E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.90.1150.10 429 607 8.7E-68 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 2.4E-46 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Gene3D G3DSA:3.40.50.220 22 116 8.6E-13 T 11-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 AL538_18480 1e06784b8cf109b6933b0a18d07a7768 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 28 111 2.7E-13 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AL538_23755 1553763e4db5b1d36082fab8daef8a19 184 SUPERFAMILY SSF55729 13 157 3.79E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_23755 1553763e4db5b1d36082fab8daef8a19 184 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 3.3E-14 T 11-10-2018 IPR000182 GNAT domain AL538_23755 1553763e4db5b1d36082fab8daef8a19 184 Gene3D G3DSA:3.40.630.30 2 171 7.3E-30 T 11-10-2018 AL538_05540 62a7dd33723e6c34678747be5fb582da 328 SUPERFAMILY SSF51735 1 326 8.61E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05540 62a7dd33723e6c34678747be5fb582da 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 226 6.6E-32 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL538_05540 62a7dd33723e6c34678747be5fb582da 328 Gene3D G3DSA:3.40.50.720 1 328 1.4E-67 T 11-10-2018 AL538_00950 1bfa761eff8daa6f949b7f40ac5615ca 342 Gene3D G3DSA:3.40.190.10 28 257 8.7E-50 T 11-10-2018 AL538_00950 1bfa761eff8daa6f949b7f40ac5615ca 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 1.4E-28 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_00950 1bfa761eff8daa6f949b7f40ac5615ca 342 SMART SM00062 38 267 2.5E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_00950 1bfa761eff8daa6f949b7f40ac5615ca 342 Gene3D G3DSA:3.40.190.10 130 225 8.7E-50 T 11-10-2018 AL538_00950 1bfa761eff8daa6f949b7f40ac5615ca 342 SUPERFAMILY SSF53850 29 259 2.82E-48 T 11-10-2018 AL538_16825 5c68081c838179d79cdd9e5daf62897f 827 SUPERFAMILY SSF49452 740 810 2.35E-5 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL538_16825 5c68081c838179d79cdd9e5daf62897f 827 Pfam PF00577 Outer membrane usher protein 182 718 2.9E-21 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AL538_16825 5c68081c838179d79cdd9e5daf62897f 827 Gene3D G3DSA:2.60.40.3110 254 340 1.6E-5 T 11-10-2018 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 Gene3D G3DSA:3.40.50.2300 1 149 5.9E-56 T 11-10-2018 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.5E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 2.5E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.5E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 2.5E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.5E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 SUPERFAMILY SSF52788 1 149 6.67E-47 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 145 7.9E-36 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_03950 39721433b06ac88bfc15cff45dd6075d 149 SMART SM00226 2 148 1.3E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 Pfam PF00563 EAL domain 74 194 3.6E-12 T 11-10-2018 IPR001633 EAL domain AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 SUPERFAMILY SSF109604 185 403 2.45E-39 T 11-10-2018 AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 Pfam PF08668 HDOD domain 208 324 1.3E-11 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 Gene3D G3DSA:3.20.20.450 50 202 4.6E-16 T 11-10-2018 IPR035919 EAL domain superfamily AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 PIRSF PIRSF003180 1 407 6.2E-171 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 Gene3D G3DSA:1.10.3210.10 203 368 5.3E-21 T 11-10-2018 AL538_09065 635ec2f0c3cd12c7f4059df4d7b6fe88 407 SUPERFAMILY SSF141868 4 197 5.89E-26 T 11-10-2018 IPR035919 EAL domain superfamily AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 SMART SM00342 172 254 1.4E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 Pfam PF12833 Helix-turn-helix domain 178 255 2.6E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.9E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 SUPERFAMILY SSF46689 207 256 1.73E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19125 7b1007599c413aa2fd1d87e227022e67 274 Gene3D G3DSA:1.10.10.60 152 266 5.8E-27 T 11-10-2018 AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 SUPERFAMILY SSF103088 627 730 6.02E-17 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 Pfam PF00691 OmpA family 630 692 4.4E-8 T 11-10-2018 IPR006665 OmpA-like domain AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 PRINTS PR01021 OMPA domain signature 660 675 8.0E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 PRINTS PR01021 OMPA domain signature 675 691 8.0E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 PRINTS PR01021 OMPA domain signature 630 652 8.0E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_23305 2c75b52ec50241b790ee0fffed1d0cec 1563 Gene3D G3DSA:3.30.1330.60 617 731 2.4E-16 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_05330 63d7aa57f8ccb710349a372ae86d73f2 130 Pfam PF07087 Protein of unknown function (DUF1353) 40 115 1.4E-9 T 11-10-2018 IPR010767 Campylobacter phage CGC-2007, Cje0229 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 Gene3D G3DSA:3.30.360.10 127 234 1.0E-100 T 11-10-2018 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 2.4E-97 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.2E-39 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 SUPERFAMILY SSF55347 127 236 1.46E-37 T 11-10-2018 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 Gene3D G3DSA:3.40.50.720 3 264 1.0E-100 T 11-10-2018 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 9.1E-44 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 SUPERFAMILY SSF51735 1 268 8.91E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 PIRSF PIRSF000161 1 268 1.0E-88 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_11680 a5edd68a33eeb9c0b19db473a5d1203e 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.531 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AL538_10305 abb217c3156fe6e58b327f08f47ceec0 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 4.7E-57 T 11-10-2018 IPR022792 Type II secretion system, protein N AL538_02960 5c74fe5e20076f98926be29d3e443ee1 458 Pfam PF04317 YcjX-like family, DUF463 20 457 1.4E-187 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL538_02960 5c74fe5e20076f98926be29d3e443ee1 458 PIRSF PIRSF019381 1 458 4.4E-199 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 239 259 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 Gene3D G3DSA:3.40.50.1970 4 157 5.3E-40 T 11-10-2018 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 Gene3D G3DSA:1.20.1090.10 158 361 8.0E-79 T 11-10-2018 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 344 1.6E-66 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 PIRSF PIRSF000112 1 358 6.0E-92 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 148 176 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_15035 b01315161da5c3e30e824d455d8fae6f 362 SUPERFAMILY SSF56796 3 353 1.13E-85 T 11-10-2018 AL538_18440 fa4dfe1d6907594142cc746a6c50811b 295 Pfam PF01261 Xylose isomerase-like TIM barrel 32 246 5.4E-27 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL538_18440 fa4dfe1d6907594142cc746a6c50811b 295 SUPERFAMILY SSF51658 3 292 9.67E-46 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_18440 fa4dfe1d6907594142cc746a6c50811b 295 Pfam PF07582 AP endonuclease family 2 C terminus 251 272 5.2E-5 T 11-10-2018 IPR011418 AP endonuclease, family 2, C-terminal AL538_18440 fa4dfe1d6907594142cc746a6c50811b 295 Gene3D G3DSA:3.20.20.150 3 294 4.6E-59 T 11-10-2018 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 Gene3D G3DSA:3.40.190.10 103 286 2.7E-43 T 11-10-2018 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 SUPERFAMILY SSF53850 95 293 2.35E-33 T 11-10-2018 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 Gene3D G3DSA:3.40.190.10 163 259 2.7E-43 T 11-10-2018 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 Pfam PF03466 LysR substrate binding domain 94 290 1.0E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 Gene3D G3DSA:1.10.10.10 7 94 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_06030 a3cd176f4e6345f20393d80bf2f8883c 309 SUPERFAMILY SSF46785 4 87 6.96E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_12265 35a325fe04346b038247eec195ed0914 202 Pfam PF00578 AhpC/TSA family 4 139 2.7E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_12265 35a325fe04346b038247eec195ed0914 202 Gene3D G3DSA:3.40.30.10 1 197 1.6E-71 T 11-10-2018 AL538_12265 35a325fe04346b038247eec195ed0914 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_12265 35a325fe04346b038247eec195ed0914 202 PIRSF PIRSF000239 1 201 2.4E-58 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AL538_12265 35a325fe04346b038247eec195ed0914 202 SUPERFAMILY SSF52833 1 194 1.33E-65 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_20080 13a2df346cb4fa6c8ed6392298483281 306 Pfam PF01497 Periplasmic binding protein 44 281 1.4E-34 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_20080 13a2df346cb4fa6c8ed6392298483281 306 SUPERFAMILY SSF53807 24 291 7.46E-65 T 11-10-2018 AL538_20080 13a2df346cb4fa6c8ed6392298483281 306 Gene3D G3DSA:3.40.50.1980 29 284 2.1E-84 T 11-10-2018 AL538_20080 13a2df346cb4fa6c8ed6392298483281 306 Gene3D G3DSA:3.40.50.1980 172 278 2.1E-84 T 11-10-2018 AL538_24440 8b104d89bb6fc1ad49c8660323c7e1a4 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 278 3.6E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_24440 8b104d89bb6fc1ad49c8660323c7e1a4 287 SUPERFAMILY SSF56219 21 285 1.27E-28 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_24440 8b104d89bb6fc1ad49c8660323c7e1a4 287 Gene3D G3DSA:3.60.10.10 16 286 1.1E-27 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_00515 eb36cbf61cbe525a1b606ca75b055318 162 SUPERFAMILY SSF54001 44 160 6.38E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AL538_00515 eb36cbf61cbe525a1b606ca75b055318 162 Gene3D G3DSA:3.90.1720.10 40 161 1.4E-42 T 11-10-2018 AL538_00515 eb36cbf61cbe525a1b606ca75b055318 162 Pfam PF00877 NlpC/P60 family 55 159 2.7E-32 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain AL538_01420 ff63f928b61a3fd5ca1e227103b4a795 467 PIRSF PIRSF006603 15 463 6.5E-65 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_01420 ff63f928b61a3fd5ca1e227103b4a795 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 427 5.5E-96 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_01420 ff63f928b61a3fd5ca1e227103b4a795 467 Pfam PF01554 MatE 24 183 5.4E-31 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_01420 ff63f928b61a3fd5ca1e227103b4a795 467 Pfam PF01554 MatE 249 409 2.4E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_21170 b416668a258ee4e7c241d0c378176ca5 428 Pfam PF12704 MacB-like periplasmic core domain 18 251 1.0E-8 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_21170 b416668a258ee4e7c241d0c378176ca5 428 Pfam PF02687 FtsX-like permease family 332 417 3.0E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 Pfam PF00771 FHIPEP family 428 615 3.9E-9 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 Pfam PF00771 FHIPEP family 26 336 3.9E-107 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 67 86 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 129 145 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 229 243 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 30 43 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 148 166 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_00400 a1a22456816d124169d362fe51d2b8d8 629 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 178 195 9.8E-46 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AL538_27365 e665086066bd00c78d9d768e34e7fc0e 688 Pfam PF00563 EAL domain 434 663 1.6E-61 T 11-10-2018 IPR001633 EAL domain AL538_27365 e665086066bd00c78d9d768e34e7fc0e 688 SMART SM00052 426 668 1.1E-68 T 11-10-2018 IPR001633 EAL domain AL538_27365 e665086066bd00c78d9d768e34e7fc0e 688 Pfam PF02378 Phosphotransferase system, EIIC 117 322 5.6E-21 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_27365 e665086066bd00c78d9d768e34e7fc0e 688 SUPERFAMILY SSF141868 433 674 7.72E-70 T 11-10-2018 IPR035919 EAL domain superfamily AL538_27365 e665086066bd00c78d9d768e34e7fc0e 688 Gene3D G3DSA:3.20.20.450 426 679 1.0E-71 T 11-10-2018 IPR035919 EAL domain superfamily AL538_15820 b175bf188cc047d0152ece412463a853 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 1.1E-68 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL538_15820 b175bf188cc047d0152ece412463a853 204 Gene3D G3DSA:3.40.50.880 2 204 1.8E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_15820 b175bf188cc047d0152ece412463a853 204 SUPERFAMILY SSF52317 5 203 5.81E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_15820 b175bf188cc047d0152ece412463a853 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 5.9E-18 T 11-10-2018 IPR017926 Glutamine amidotransferase AL538_15820 b175bf188cc047d0152ece412463a853 204 PIRSF PIRSF000495 4 204 1.2E-64 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL538_15820 b175bf188cc047d0152ece412463a853 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.665 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 6.9E-126 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.0E-63 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 4.4E-256 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 Pfam PF01578 Cytochrome C assembly protein 89 297 2.5E-54 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_04955 f82c8a6fe8c8f73cdadc4f89f2778dce 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.2E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 Gene3D G3DSA:3.40.190.290 91 278 4.1E-26 T 11-10-2018 AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 SUPERFAMILY SSF46785 3 111 7.43E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 Gene3D G3DSA:1.10.10.10 2 89 9.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 Pfam PF03466 LysR substrate binding domain 88 279 3.4E-18 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26455 4d8969e2a908500977a48efac8b40a9b 288 SUPERFAMILY SSF53850 90 283 1.3E-20 T 11-10-2018 AL538_09565 a47000644ae91369e5da75ae542f4c98 401 Pfam PF07690 Major Facilitator Superfamily 13 349 2.2E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_09565 a47000644ae91369e5da75ae542f4c98 401 SUPERFAMILY SSF103473 5 377 1.96E-51 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_09565 a47000644ae91369e5da75ae542f4c98 401 Gene3D G3DSA:1.20.1720.10 8 377 6.2E-73 T 11-10-2018 AL538_09565 a47000644ae91369e5da75ae542f4c98 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 1.7E-82 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL538_24130 71d3da46a210ad9f7ce0fafc780d9463 814 Gene3D G3DSA:3.40.50.1820 446 621 1.4E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_24130 71d3da46a210ad9f7ce0fafc780d9463 814 SUPERFAMILY SSF53474 452 608 2.29E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_24130 71d3da46a210ad9f7ce0fafc780d9463 814 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 283 3.7E-119 T 11-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain AL538_24130 71d3da46a210ad9f7ce0fafc780d9463 814 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 799 8.3E-255 T 11-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 SUPERFAMILY SSF46626 6 105 1.32E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 Gene3D G3DSA:1.10.760.10 110 205 3.6E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 Pfam PF00034 Cytochrome c 117 201 7.5E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 Pfam PF00034 Cytochrome c 25 103 1.4E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 PIRSF PIRSF000005 1 205 1.5E-65 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 Gene3D G3DSA:1.10.760.10 19 108 9.1E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_10145 90cb03a07b29b7a0f9eff0c7ce63c0af 205 SUPERFAMILY SSF46626 114 203 1.45E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_12550 7928f10296e53b8ecec29bc82990ec1a 199 Pfam PF09335 SNARE associated Golgi protein 37 157 3.3E-21 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_18190 e8c546ed138a3296f7e69076ebc23e6d 166 SUPERFAMILY SSF82153 33 165 1.03E-44 T 11-10-2018 IPR036378 FAS1 domain superfamily AL538_18190 e8c546ed138a3296f7e69076ebc23e6d 166 SMART SM00554 67 166 5.8E-35 T 11-10-2018 IPR000782 FAS1 domain AL538_18190 e8c546ed138a3296f7e69076ebc23e6d 166 Gene3D G3DSA:2.30.180.10 11 166 1.5E-52 T 11-10-2018 IPR036378 FAS1 domain superfamily AL538_18190 e8c546ed138a3296f7e69076ebc23e6d 166 Pfam PF02469 Fasciclin domain 43 165 3.6E-38 T 11-10-2018 IPR000782 FAS1 domain AL538_23800 1dfd627ce2c6d0f5f85e9be8f7dc4a40 160 Pfam PF12688 Tetratrico peptide repeat 38 156 1.1E-14 T 11-10-2018 AL538_23800 1dfd627ce2c6d0f5f85e9be8f7dc4a40 160 Gene3D G3DSA:1.25.40.10 49 154 4.1E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23800 1dfd627ce2c6d0f5f85e9be8f7dc4a40 160 SUPERFAMILY SSF48452 7 125 4.17E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23800 1dfd627ce2c6d0f5f85e9be8f7dc4a40 160 SMART SM00028 72 105 8.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23800 1dfd627ce2c6d0f5f85e9be8f7dc4a40 160 SMART SM00028 35 68 95.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_01210 e5c330296786354e1bc1545387257bd6 228 PIRSF PIRSF006171 3 228 1.4E-79 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AL538_01210 e5c330296786354e1bc1545387257bd6 228 Pfam PF12431 Transcriptional regulator 134 162 4.5E-7 T 11-10-2018 IPR028141 Transcriptional regulator AL538_01210 e5c330296786354e1bc1545387257bd6 228 SUPERFAMILY SSF52172 5 134 8.11E-32 T 11-10-2018 IPR011006 CheY-like superfamily AL538_01210 e5c330296786354e1bc1545387257bd6 228 Gene3D G3DSA:3.40.50.2300 3 147 1.8E-27 T 11-10-2018 AL538_01210 e5c330296786354e1bc1545387257bd6 228 SMART SM00448 5 118 5.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01210 e5c330296786354e1bc1545387257bd6 228 Pfam PF00072 Response regulator receiver domain 7 118 3.9E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 SUPERFAMILY SSF53383 103 483 1.36E-79 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 SUPERFAMILY SSF46785 18 87 2.02E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 83 4.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 Gene3D G3DSA:3.90.1150.10 123 477 7.6E-82 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 Gene3D G3DSA:1.10.10.10 17 84 5.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 Gene3D G3DSA:3.40.640.10 152 367 7.6E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 Pfam PF00155 Aminotransferase class I and II 144 466 8.5E-27 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_20185 77dbd8f24e2d7baa7c64f39fd3bcade9 485 SMART SM00345 24 83 3.8E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_24065 bb6cd84f245750395551c700f8bacc9b 179 SUPERFAMILY SSF81342 4 175 1.02E-36 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_24065 bb6cd84f245750395551c700f8bacc9b 179 Gene3D G3DSA:1.20.950.20 2 81 9.4E-7 T 11-10-2018 AL538_24065 bb6cd84f245750395551c700f8bacc9b 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 8.4E-33 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL538_05705 e05806bccb749d0718828490e5ea9294 194 SUPERFAMILY SSF88946 8 118 2.35E-26 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AL538_05705 e05806bccb749d0718828490e5ea9294 194 Gene3D G3DSA:1.10.10.10 127 194 4.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05705 e05806bccb749d0718828490e5ea9294 194 Pfam PF04545 Sigma-70, region 4 139 187 1.4E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AL538_05705 e05806bccb749d0718828490e5ea9294 194 SUPERFAMILY SSF88659 127 189 2.06E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_05705 e05806bccb749d0718828490e5ea9294 194 Gene3D G3DSA:1.10.1740.10 13 96 9.8E-24 T 11-10-2018 AL538_05705 e05806bccb749d0718828490e5ea9294 194 Pfam PF04542 Sigma-70 region 2 34 99 5.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AL538_05705 e05806bccb749d0718828490e5ea9294 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 1.0E-29 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.457 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 Pfam PF01966 HD domain 62 147 7.0E-8 T 11-10-2018 IPR006674 HD domain AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 SMART SM00471 58 264 2.0E-7 T 11-10-2018 IPR003607 HD/PDEase domain AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 SUPERFAMILY SSF109604 19 437 3.08E-79 T 11-10-2018 AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 3.3E-26 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain AL538_14290 2d1fb49ea567ce82f816b86a90dc6f08 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 6.5E-128 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.9E-148 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 SUPERFAMILY SSF102114 52 314 2.09E-67 T 11-10-2018 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 Gene3D G3DSA:3.20.20.70 48 293 8.1E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 Pfam PF04055 Radical SAM superfamily 91 252 9.0E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 PIRSF PIRSF005963 1 320 6.4E-129 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 SMART SM00729 84 293 1.1E-18 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 153.781 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_13040 7d048ca4a85351cb40e39a67c5952239 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.7E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Gene3D G3DSA:3.40.50.1000 482 720 1.3E-65 T 11-10-2018 IPR023214 HAD superfamily AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 3.6E-30 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Gene3D G3DSA:3.40.1110.10 511 614 1.3E-65 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Gene3D G3DSA:2.70.150.20 292 407 5.8E-33 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 SUPERFAMILY SSF81665 250 765 1.07E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 1.6E-152 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 SUPERFAMILY SSF56784 500 781 2.33E-46 T 11-10-2018 IPR036412 HAD-like superfamily AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 3.2E-122 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 9.0E-6 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 9.0E-6 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 9.0E-6 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 9.0E-6 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 SUPERFAMILY SSF55008 85 162 8.9E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 8.3E-27 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Pfam PF00122 E1-E2 ATPase 318 478 4.7E-46 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 1.8E-159 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.0E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 9.8E-24 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 9.8E-24 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 9.8E-24 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 9.8E-24 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 9.8E-24 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 SUPERFAMILY SSF81653 318 402 2.35E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 Gene3D G3DSA:3.30.70.100 88 173 3.3E-14 T 11-10-2018 AL538_00755 6422d72ad68f6de9536590e4d7b17a73 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 6.8E-73 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AL538_20700 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-24 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL538_20700 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 5.2E-72 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL538_20700 538b7fd5ccf0a9ad1d35790c1ba85604 402 Pfam PF07670 Nucleoside recognition 90 185 1.5E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_20700 538b7fd5ccf0a9ad1d35790c1ba85604 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 7.2E-142 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Gene3D G3DSA:2.150.10.10 95 228 3.5E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 SUPERFAMILY SSF51120 11 207 1.22E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Gene3D G3DSA:2.150.10.10 40 94 1.5E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.0071 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0015 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 28 15.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.75 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 PRINTS PR00313 NodO calcium binding signature 58 69 7.2E-12 T 11-10-2018 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 PRINTS PR00313 NodO calcium binding signature 124 133 7.2E-12 T 11-10-2018 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 PRINTS PR00313 NodO calcium binding signature 79 87 7.2E-12 T 11-10-2018 AL538_03350 afe4fee847c6a4a359b62d156b44bede 236 PRINTS PR00313 NodO calcium binding signature 70 78 7.2E-12 T 11-10-2018 AL538_08400 eca1fc48a6e01c6d54b93f02b1fe7dff 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 7.2E-180 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_08400 eca1fc48a6e01c6d54b93f02b1fe7dff 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.9E-145 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_08400 eca1fc48a6e01c6d54b93f02b1fe7dff 435 PIRSF PIRSF004539 1 435 7.8E-177 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 AL538_26090 a6b7f2dc4213fd1568d3520373a3ba55 413 Pfam PF01566 Natural resistance-associated macrophage protein 57 380 1.2E-21 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 AL538_28075 182f2d93af7aa1a633aadad980698532 301 Pfam PF12802 MarR family 28 85 2.0E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_28075 182f2d93af7aa1a633aadad980698532 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 4.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_28075 182f2d93af7aa1a633aadad980698532 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 4.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_28075 182f2d93af7aa1a633aadad980698532 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 4.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_28075 182f2d93af7aa1a633aadad980698532 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 4.8E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_28075 182f2d93af7aa1a633aadad980698532 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AL538_28075 182f2d93af7aa1a633aadad980698532 301 SUPERFAMILY SSF55729 144 301 7.38E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_28075 182f2d93af7aa1a633aadad980698532 301 Gene3D G3DSA:3.40.630.30 145 301 1.9E-23 T 11-10-2018 AL538_28075 182f2d93af7aa1a633aadad980698532 301 Pfam PF00583 Acetyltransferase (GNAT) family 193 278 3.3E-13 T 11-10-2018 IPR000182 GNAT domain AL538_28075 182f2d93af7aa1a633aadad980698532 301 SUPERFAMILY SSF46785 8 135 1.24E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_28075 182f2d93af7aa1a633aadad980698532 301 Gene3D G3DSA:1.10.10.10 4 144 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_28075 182f2d93af7aa1a633aadad980698532 301 SMART SM00347 22 121 1.5E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AL538_04555 fe236b564597f149423def92d659eaac 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 1.2E-66 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_04555 fe236b564597f149423def92d659eaac 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.2E-65 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_21470 14e5510c3ec0a8fa61981c093db86155 231 Pfam PF06468 Spondin_N 46 164 3.4E-9 T 11-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_21470 14e5510c3ec0a8fa61981c093db86155 231 Gene3D G3DSA:2.60.40.2130 32 176 7.8E-11 T 11-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_00315 884d5eb22a5f5b3a093b888b8104315f 535 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 512 1.0E-112 T 11-10-2018 IPR013381 CRISPR-associated protein Cse1 AL538_00315 884d5eb22a5f5b3a093b888b8104315f 535 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 463 2.6E-92 T 11-10-2018 IPR013381 CRISPR-associated protein Cse1 AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 72 5.3E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 SUPERFAMILY SSF47616 71 205 1.38E-18 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 Gene3D G3DSA:1.20.1050.10 83 193 1.9E-52 T 11-10-2018 AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 Gene3D G3DSA:3.40.30.10 3 200 1.9E-52 T 11-10-2018 AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 SUPERFAMILY SSF52833 2 84 4.58E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_02525 ecd8c2c4b140081f42e3a5c4db14bede 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 194 4.8E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL538_26590 2dbfd79da2e02ca9027b7b15976ac1f7 308 SMART SM00382 30 212 1.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26590 2dbfd79da2e02ca9027b7b15976ac1f7 308 SUPERFAMILY SSF52540 4 227 9.88E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26590 2dbfd79da2e02ca9027b7b15976ac1f7 308 Pfam PF00005 ABC transporter 22 165 8.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26590 2dbfd79da2e02ca9027b7b15976ac1f7 308 Gene3D G3DSA:3.40.50.300 1 243 5.7E-71 T 11-10-2018 AL538_26590 2dbfd79da2e02ca9027b7b15976ac1f7 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_25180 432bbe8e7e48a591366ecd12f1d3a1ea 111 SUPERFAMILY SSF50022 5 106 2.88E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_25180 432bbe8e7e48a591366ecd12f1d3a1ea 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 5 105 1.4E-33 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL538_25180 432bbe8e7e48a591366ecd12f1d3a1ea 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 4.5E-33 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AL538_25180 432bbe8e7e48a591366ecd12f1d3a1ea 111 Gene3D G3DSA:2.102.10.10 1 111 1.4E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AL538_01315 9db2c2750b933decdef1445c3da31301 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 334 54.485 T 11-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AL538_01315 9db2c2750b933decdef1445c3da31301 334 Gene3D G3DSA:3.90.420.10 67 334 5.8E-115 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AL538_01315 9db2c2750b933decdef1445c3da31301 334 SUPERFAMILY SSF56524 76 330 8.24E-94 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AL538_01315 9db2c2750b933decdef1445c3da31301 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 112 267 3.1E-32 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AL538_23645 6045d20711a44c1854dafcd65a639858 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 2.5E-46 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AL538_23645 6045d20711a44c1854dafcd65a639858 281 Gene3D G3DSA:1.10.12.10 217 280 8.8E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AL538_23645 6045d20711a44c1854dafcd65a639858 281 SUPERFAMILY SSF52096 16 275 4.7E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_23645 6045d20711a44c1854dafcd65a639858 281 Gene3D G3DSA:3.90.226.10 14 214 3.2E-61 T 11-10-2018 AL538_14870 3d9d6308390ac9fba40769b8e45d8c11 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 1.9E-108 T 11-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AL538_14870 3d9d6308390ac9fba40769b8e45d8c11 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 5.1E-60 T 11-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AL538_00735 2208b0c52a5ca420b532f3cabf76c5f8 315 SUPERFAMILY SSF52402 158 308 5.3E-23 T 11-10-2018 AL538_00735 2208b0c52a5ca420b532f3cabf76c5f8 315 SUPERFAMILY SSF52402 4 158 1.93E-25 T 11-10-2018 AL538_00735 2208b0c52a5ca420b532f3cabf76c5f8 315 Pfam PF00582 Universal stress protein family 4 148 4.1E-14 T 11-10-2018 IPR006016 UspA AL538_00735 2208b0c52a5ca420b532f3cabf76c5f8 315 Pfam PF00582 Universal stress protein family 178 301 2.1E-14 T 11-10-2018 IPR006016 UspA AL538_00735 2208b0c52a5ca420b532f3cabf76c5f8 315 Gene3D G3DSA:3.40.50.12370 1 313 5.9E-112 T 11-10-2018 AL538_05820 f19b1d6ea2dfd67de40d7df17db5a9f5 351 Gene3D G3DSA:3.20.20.190 21 350 1.3E-124 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_05820 f19b1d6ea2dfd67de40d7df17db5a9f5 351 SUPERFAMILY SSF51695 23 350 1.39E-90 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_05820 f19b1d6ea2dfd67de40d7df17db5a9f5 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 9.7E-65 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 Gene3D G3DSA:2.60.120.10 5 140 9.0E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 3.3E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 Gene3D G3DSA:3.10.580.10 141 289 3.4E-17 T 11-10-2018 AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 SUPERFAMILY SSF54631 144 276 1.97E-16 T 11-10-2018 AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 SUPERFAMILY SSF51206 8 130 2.75E-16 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 8.0E-41 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL538_08455 1df49559f9d07b5c1abc66dac2ad5762 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 7.0E-40 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL538_15830 4bcc1352be92399c8f4e5fc0ec46087d 257 Pfam PF00977 Histidine biosynthesis protein 5 239 3.6E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AL538_15830 4bcc1352be92399c8f4e5fc0ec46087d 257 Gene3D G3DSA:3.20.20.70 1 257 2.8E-95 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15830 4bcc1352be92399c8f4e5fc0ec46087d 257 SUPERFAMILY SSF51366 1 256 1.65E-74 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_15830 4bcc1352be92399c8f4e5fc0ec46087d 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.9E-115 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL538_15830 4bcc1352be92399c8f4e5fc0ec46087d 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.915 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AL538_04750 c272bf77162f8e51c875ad0021c6e733 425 PIRSF PIRSF006054 1 425 4.2E-186 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AL538_04750 c272bf77162f8e51c875ad0021c6e733 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.455 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 AL538_04750 c272bf77162f8e51c875ad0021c6e733 425 Pfam PF03313 Serine dehydratase alpha chain 163 420 1.6E-50 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 Gene3D G3DSA:3.40.50.1860 99 208 2.7E-82 T 11-10-2018 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 SUPERFAMILY SSF53681 113 262 5.23E-32 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 4.6E-26 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 SUPERFAMILY SSF53681 8 108 1.47E-31 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 236 3.9E-67 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 Gene3D G3DSA:3.40.50.1860 11 237 2.7E-82 T 11-10-2018 AL538_08810 39e1ef69d0620b2dc2da39753e336765 268 Hamap MF_00258 Glutamate racemase [murI]. 7 256 32.516 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AL538_26535 0133dc815d19b7e0420ac9cf081c53dd 176 PIRSF PIRSF004633 1 176 1.3E-77 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL538_26535 0133dc815d19b7e0420ac9cf081c53dd 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 4.0E-18 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AL538_26535 0133dc815d19b7e0420ac9cf081c53dd 176 Gene3D G3DSA:2.30.110.10 12 176 8.7E-55 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_26535 0133dc815d19b7e0420ac9cf081c53dd 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.3E-91 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL538_26535 0133dc815d19b7e0420ac9cf081c53dd 176 SUPERFAMILY SSF50475 12 162 7.3E-35 T 11-10-2018 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 Gene3D G3DSA:3.90.79.10 1 159 7.6E-51 T 11-10-2018 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH AL538_11940 ea4a233c6f60a7b43844481d56274038 172 SUPERFAMILY SSF55811 6 152 8.26E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 Pfam PF00293 NUDIX domain 7 145 6.1E-27 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_11940 ea4a233c6f60a7b43844481d56274038 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 Gene3D G3DSA:3.40.50.2000 161 318 5.4E-122 T 11-10-2018 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 1.8E-34 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 SUPERFAMILY SSF53756 5 352 4.04E-126 T 11-10-2018 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 8.9E-118 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.4E-47 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.93 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_11640 94eea9a19a22d5b976025d10cd76e5ce 355 Gene3D G3DSA:3.40.50.2000 8 160 5.4E-122 T 11-10-2018 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 Gene3D G3DSA:3.20.20.70 15 411 9.7E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 188 405 6.0E-7 T 11-10-2018 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 6.0E-149 T 11-10-2018 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 SUPERFAMILY SSF102114 24 372 6.93E-38 T 11-10-2018 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 Pfam PF13353 4Fe-4S single cluster domain 27 162 1.2E-4 T 11-10-2018 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 Pfam PF04055 Radical SAM superfamily 24 196 1.7E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 6.3E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_23215 68e586de63c77f5d0a53395fa01b3769 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 1.4E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain AL538_02740 b12bc8411e81c899f670cc994405c964 261 Pfam PF01936 NYN domain 9 142 1.4E-31 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AL538_02740 b12bc8411e81c899f670cc994405c964 261 Gene3D G3DSA:3.40.50.1010 2 146 2.8E-19 T 11-10-2018 AL538_02740 b12bc8411e81c899f670cc994405c964 261 Pfam PF12872 OST-HTH/LOTUS domain 180 245 1.5E-12 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain AL538_02740 b12bc8411e81c899f670cc994405c964 261 Gene3D G3DSA:1.10.10.1880 186 256 8.4E-19 T 11-10-2018 AL538_08020 8e4eb0388dc1bdcb204358c780f7d04b 1056 SUPERFAMILY SSF56219 515 917 3.45E-26 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Gene3D G3DSA:3.60.15.10 1 247 1.1E-105 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 SMART SM00849 34 209 2.2E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Gene3D G3DSA:3.40.50.360 253 395 2.0E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 SUPERFAMILY SSF56281 8 285 2.03E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Pfam PF00258 Flavodoxin 256 388 2.2E-11 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 SUPERFAMILY SSF52218 251 398 1.84E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 4.8E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 SUPERFAMILY SSF57802 447 499 9.09E-17 T 11-10-2018 AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Gene3D G3DSA:2.20.28.10 448 500 1.4E-20 T 11-10-2018 AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 PRINTS PR00163 Rubredoxin signature 449 465 1.3E-5 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 PRINTS PR00163 Rubredoxin signature 479 495 1.3E-5 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AL538_21960 aa0606fea5fe0be78423991d79e7010f 500 Pfam PF00301 Rubredoxin 450 495 7.6E-18 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 AL538_10960 03b40ccbc177950c438d528707e3d836 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 39 152 5.8E-30 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 PIRSF PIRSF003180 1 403 6.4E-168 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 SUPERFAMILY SSF109604 181 400 1.88E-42 T 11-10-2018 AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 Gene3D G3DSA:1.10.3210.10 195 402 5.4E-22 T 11-10-2018 AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 SMART SM00052 2 195 7.2E-4 T 11-10-2018 IPR001633 EAL domain AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 Pfam PF00563 EAL domain 77 190 4.6E-14 T 11-10-2018 IPR001633 EAL domain AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 Pfam PF08668 HDOD domain 205 319 4.2E-12 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 SUPERFAMILY SSF141868 5 193 2.62E-28 T 11-10-2018 IPR035919 EAL domain superfamily AL538_15845 edaf81a46953b4af5a3a61114ac0df32 404 Gene3D G3DSA:3.20.20.450 3 194 1.1E-17 T 11-10-2018 IPR035919 EAL domain superfamily AL538_26065 da00a7165e37a8a03a02693bd58e9589 302 Pfam PF00248 Aldo/keto reductase family 17 291 8.9E-58 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AL538_26065 da00a7165e37a8a03a02693bd58e9589 302 Gene3D G3DSA:3.20.20.100 1 302 1.2E-98 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL538_26065 da00a7165e37a8a03a02693bd58e9589 302 SUPERFAMILY SSF51430 6 293 1.7E-68 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL538_23520 a0e754a1b306615704be519ff473bb0e 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 4.8E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_23520 a0e754a1b306615704be519ff473bb0e 718 Gene3D G3DSA:2.170.130.10 35 165 1.0E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_23520 a0e754a1b306615704be519ff473bb0e 718 Gene3D G3DSA:2.40.170.20 175 715 4.1E-39 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_23520 a0e754a1b306615704be519ff473bb0e 718 Pfam PF00593 TonB dependent receptor 286 713 1.6E-25 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_23520 a0e754a1b306615704be519ff473bb0e 718 SUPERFAMILY SSF56935 41 715 6.23E-82 T 11-10-2018 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SMART SM00388 129 194 3.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.9E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SUPERFAMILY SSF55874 198 347 2.88E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SUPERFAMILY SSF55785 7 102 2.27E-8 T 11-10-2018 IPR035965 PAS domain superfamily AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Pfam PF00989 PAS fold 7 111 4.1E-16 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 9.8E-7 T 11-10-2018 IPR000014 PAS domain AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 11-10-2018 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SMART SM00091 4 72 2.2E-6 T 11-10-2018 IPR000014 PAS domain AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SMART SM00387 233 348 1.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Gene3D G3DSA:3.30.565.10 192 348 4.1E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 Gene3D G3DSA:3.30.450.20 1 112 1.8E-28 T 11-10-2018 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 SUPERFAMILY SSF47384 125 189 2.16E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_10185 5cc7e6dde7c80e516937834b9348056a 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_03970 4950f7361be38bed41d2be39b48cdf1d 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AL538_03970 4950f7361be38bed41d2be39b48cdf1d 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 1.2E-99 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AL538_03970 4950f7361be38bed41d2be39b48cdf1d 358 SUPERFAMILY SSF52540 87 318 2.83E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03970 4950f7361be38bed41d2be39b48cdf1d 358 Gene3D G3DSA:3.40.50.300 80 336 4.7E-84 T 11-10-2018 AL538_03970 4950f7361be38bed41d2be39b48cdf1d 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.47 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AL538_18705 471da3033fd5d57b38cb5c1a59637948 109 Gene3D G3DSA:1.10.3730.20 1 109 1.0E-26 T 11-10-2018 AL538_18705 471da3033fd5d57b38cb5c1a59637948 109 SUPERFAMILY SSF103481 4 106 1.7E-15 T 11-10-2018 AL538_18705 471da3033fd5d57b38cb5c1a59637948 109 Pfam PF00893 Small Multidrug Resistance protein 1 94 7.6E-17 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL538_15165 cabaad8bf878b571b5d1e4a2057b2d80 221 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 14 220 2.0E-71 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AL538_15165 cabaad8bf878b571b5d1e4a2057b2d80 221 Pfam PF06578 YOP proteins translocation protein K (YscK) 10 221 1.6E-67 T 11-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 Gene3D G3DSA:3.40.1030.10 72 317 1.0E-40 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 Gene3D G3DSA:1.20.970.10 3 71 5.2E-16 T 11-10-2018 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 SUPERFAMILY SSF52418 73 312 6.28E-42 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 68 2.5E-11 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 SUPERFAMILY SSF47648 8 72 4.32E-15 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_25215 13e00fb1b4ef64fcd4d9188481a585fe 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 253 5.2E-5 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 SUPERFAMILY SSF56935 22 336 4.88E-43 T 11-10-2018 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 Pfam PF00267 Gram-negative porin 51 336 6.0E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 4.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 300 319 4.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 4.4E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 AL538_20550 4e8665d5cbe91a24c4e84bbcbb276c78 336 Gene3D G3DSA:2.40.160.10 22 336 5.8E-43 T 11-10-2018 IPR023614 Porin domain superfamily AL538_17330 78e433f8eb1c812f8d472d14e714d0d8 82 PIRSF PIRSF002855 1 82 9.6E-32 T 11-10-2018 IPR016367 Murein-lipoprotein AL538_17330 78e433f8eb1c812f8d472d14e714d0d8 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 1.3E-24 T 11-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 AL538_17330 78e433f8eb1c812f8d472d14e714d0d8 82 Gene3D G3DSA:1.20.5.190 23 81 8.3E-13 T 11-10-2018 AL538_17330 78e433f8eb1c812f8d472d14e714d0d8 82 SUPERFAMILY SSF58042 29 81 2.88E-16 T 11-10-2018 AL538_18610 b8aef33cfe3d2e2fcd9967122c3c1b9b 153 Pfam PF03974 Ecotin 31 150 4.0E-39 T 11-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AL538_18610 b8aef33cfe3d2e2fcd9967122c3c1b9b 153 PIRSF PIRSF006865 1 153 7.7E-46 T 11-10-2018 IPR005658 Proteinase inhibitor I11, ecotin AL538_18610 b8aef33cfe3d2e2fcd9967122c3c1b9b 153 Gene3D G3DSA:2.60.40.550 17 153 2.2E-45 T 11-10-2018 AL538_18610 b8aef33cfe3d2e2fcd9967122c3c1b9b 153 SUPERFAMILY SSF49772 30 153 1.83E-41 T 11-10-2018 IPR036198 Ecotin superfamily AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 Gene3D G3DSA:1.10.10.10 1 90 8.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 Pfam PF03466 LysR substrate binding domain 98 268 3.0E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 SUPERFAMILY SSF53850 90 305 5.97E-18 T 11-10-2018 AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 Gene3D G3DSA:3.40.190.10 92 298 2.4E-16 T 11-10-2018 AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 Gene3D G3DSA:3.40.190.10 173 274 2.4E-16 T 11-10-2018 AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 5.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09955 7e98173e15147855b3d7f2d9355755ae 308 SUPERFAMILY SSF46785 7 90 1.56E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.3E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.3E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.3E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 Gene3D G3DSA:3.40.190.10 106 274 1.7E-29 T 11-10-2018 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 SUPERFAMILY SSF53850 89 276 2.71E-28 T 11-10-2018 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 Gene3D G3DSA:3.40.190.10 152 250 1.7E-29 T 11-10-2018 AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 Pfam PF03466 LysR substrate binding domain 119 279 1.8E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 Gene3D G3DSA:1.10.10.10 1 87 1.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23090 ab559fadc2b51e247f5846a78a2bada6 289 SUPERFAMILY SSF46785 3 85 5.15E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 SUPERFAMILY SSF51735 124 244 1.12E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 SUPERFAMILY SSF50129 4 154 1.52E-35 T 11-10-2018 IPR011032 GroES-like superfamily AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 Gene3D G3DSA:3.90.180.10 10 310 2.5E-92 T 11-10-2018 AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 SMART SM00829 12 312 1.2E-13 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 3.8E-20 T 11-10-2018 AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 4.1E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_06600 84ebc1fe6b2ae493eb2d141d18cfef51 316 Gene3D G3DSA:3.40.50.720 133 263 2.5E-92 T 11-10-2018 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:3.30.70.920 57 151 5.2E-26 T 11-10-2018 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 Gene3D G3DSA:1.10.10.10 1 56 2.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 SMART SM00344 5 114 1.0E-44 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.1E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.1E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.1E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.0E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF54909 65 150 1.74E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 SUPERFAMILY SSF46785 3 64 3.5E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL538_19620 cde18bd9d3997b1864bd8a712685ecb5 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 5.6E-17 T 11-10-2018 AL538_26895 d0dbce0ce171113d318aedaefa9ee4f7 269 Gene3D G3DSA:3.40.50.1000 7 117 3.0E-8 T 11-10-2018 IPR023214 HAD superfamily AL538_26895 d0dbce0ce171113d318aedaefa9ee4f7 269 Gene3D G3DSA:3.40.50.1000 151 269 2.6E-9 T 11-10-2018 IPR023214 HAD superfamily AL538_26895 d0dbce0ce171113d318aedaefa9ee4f7 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 19 229 7.6E-13 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_26895 d0dbce0ce171113d318aedaefa9ee4f7 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 20 90 5.2E-5 T 11-10-2018 AL538_26895 d0dbce0ce171113d318aedaefa9ee4f7 269 SUPERFAMILY SSF56784 13 258 4.49E-25 T 11-10-2018 IPR036412 HAD-like superfamily AL538_24205 0c3782ea96d3fad6625d4b6a6c08ccf7 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL538_24205 0c3782ea96d3fad6625d4b6a6c08ccf7 200 Gene3D G3DSA:3.40.50.1110 20 200 9.4E-64 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AL538_24205 0c3782ea96d3fad6625d4b6a6c08ccf7 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 1.3E-21 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AL538_24205 0c3782ea96d3fad6625d4b6a6c08ccf7 200 SUPERFAMILY SSF52266 22 199 1.1E-50 T 11-10-2018 AL538_26340 e7f86bc84252e651c3a6d6c0b9781e53 248 Gene3D G3DSA:3.20.20.140 3 247 2.2E-64 T 11-10-2018 AL538_26340 e7f86bc84252e651c3a6d6c0b9781e53 248 SMART SM00481 5 79 1.6E-8 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL538_26340 e7f86bc84252e651c3a6d6c0b9781e53 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.399 T 11-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 AL538_26340 e7f86bc84252e651c3a6d6c0b9781e53 248 SUPERFAMILY SSF89550 4 245 1.31E-61 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 1.2E-47 T 11-10-2018 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 SUPERFAMILY SSF53850 25 249 8.98E-65 T 11-10-2018 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 Gene3D G3DSA:3.40.190.10 28 249 3.3E-79 T 11-10-2018 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 PIRSF PIRSF004846 2 250 3.4E-71 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 Gene3D G3DSA:3.40.190.10 104 215 3.3E-79 T 11-10-2018 AL538_24390 80e5c9c3775724903f072ce8c84843fe 250 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.4E-63 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 AL538_22420 ce4e84a697a6082856b5b27fce79d385 217 Gene3D G3DSA:1.10.3210.50 7 217 4.6E-68 T 11-10-2018 AL538_22420 ce4e84a697a6082856b5b27fce79d385 217 Pfam PF01966 HD domain 33 134 3.2E-13 T 11-10-2018 IPR006674 HD domain AL538_22420 ce4e84a697a6082856b5b27fce79d385 217 SMART SM00471 27 144 7.0E-7 T 11-10-2018 IPR003607 HD/PDEase domain AL538_22420 ce4e84a697a6082856b5b27fce79d385 217 SUPERFAMILY SSF109604 13 216 2.83E-60 T 11-10-2018 AL538_22935 f55673cd5c4773a86ab7e05942ebdb38 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 281 8.2E-27 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_22935 f55673cd5c4773a86ab7e05942ebdb38 297 Pfam PF01545 Cation efflux family 14 214 2.1E-32 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AL538_22935 f55673cd5c4773a86ab7e05942ebdb38 297 Gene3D G3DSA:1.20.1510.10 9 214 1.6E-18 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_22935 f55673cd5c4773a86ab7e05942ebdb38 297 SUPERFAMILY SSF161111 7 214 4.32E-32 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AL538_12420 d731f7da0dc4c2574e5450e282663052 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 2.3E-143 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SUPERFAMILY SSF50998 31 376 1.02E-83 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AL538_12420 d731f7da0dc4c2574e5450e282663052 386 Gene3D G3DSA:2.130.10.10 18 385 4.3E-100 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_12420 d731f7da0dc4c2574e5450e282663052 386 Pfam PF13360 PQQ-like domain 76 310 7.5E-52 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 191 223 330.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 63 94 3.3E-8 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 243 274 55.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 147 178 0.011 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 107 138 0.012 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 280 312 42.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 SMART SM00564 322 353 0.052 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL538_12420 d731f7da0dc4c2574e5450e282663052 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.095 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Gene3D G3DSA:1.25.40.10 112 196 2.0E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 SUPERFAMILY SSF52833 3 111 1.49E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 SUPERFAMILY SSF48452 115 246 1.06E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Pfam PF00085 Thioredoxin 6 109 2.6E-15 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Pfam PF14561 Tetratricopeptide repeat 195 284 4.4E-30 T 11-10-2018 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Gene3D G3DSA:1.25.40.10 197 284 3.0E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Gene3D G3DSA:3.40.30.10 2 111 1.9E-22 T 11-10-2018 AL538_13560 f55f3fbb5ad37d57fe603c3054066332 284 Pfam PF14559 Tetratricopeptide repeat 124 190 2.1E-15 T 11-10-2018 AL538_08970 326b2187971d9c690a22e57e08d8c916 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 8.4E-34 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 AL538_08970 326b2187971d9c690a22e57e08d8c916 280 Gene3D G3DSA:3.30.70.2350 1 69 6.0E-25 T 11-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily AL538_08970 326b2187971d9c690a22e57e08d8c916 280 SUPERFAMILY SSF144091 96 271 1.31E-39 T 11-10-2018 AL538_08970 326b2187971d9c690a22e57e08d8c916 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 1.9E-116 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 AL538_08970 326b2187971d9c690a22e57e08d8c916 280 Pfam PF01694 Rhomboid family 134 271 2.0E-29 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL538_08970 326b2187971d9c690a22e57e08d8c916 280 Gene3D G3DSA:1.20.1540.10 90 279 4.3E-52 T 11-10-2018 IPR035952 Rhomboid-like superfamily AL538_07975 a6305ea58d5278029a7efac560042a06 335 SUPERFAMILY SSF53474 32 299 6.76E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_07975 a6305ea58d5278029a7efac560042a06 335 Gene3D G3DSA:3.40.50.1820 34 312 3.6E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_07975 a6305ea58d5278029a7efac560042a06 335 PIRSF PIRSF005211 1 330 2.3E-104 T 11-10-2018 IPR012020 AB hydrolase 4 family AL538_07975 a6305ea58d5278029a7efac560042a06 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 5.7E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_07975 a6305ea58d5278029a7efac560042a06 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 11-10-2018 IPR000952 AB hydrolase 4, conserved site AL538_09290 6d9c4dd40b84d2600235fba20dc4d571 252 Pfam PF09836 Putative DNA-binding domain 6 94 5.3E-23 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 53 436 1.8E-103 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 SUPERFAMILY SSF56601 51 456 1.31E-85 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 33 444 3.5E-101 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 Gene3D G3DSA:3.40.710.10 238 467 1.5E-53 T 11-10-2018 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 413 426 6.2E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 6.2E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 334 348 6.2E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 349 363 6.2E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 275 297 6.2E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_06240 fd38b9aef8bbe73851a6afb645646ab5 474 Gene3D G3DSA:3.50.80.20 81 174 6.6E-13 T 11-10-2018 AL538_02945 887b81caff6a10538f52127a7670e0ed 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 6.3E-19 T 11-10-2018 IPR000182 GNAT domain AL538_02945 887b81caff6a10538f52127a7670e0ed 194 SUPERFAMILY SSF55729 14 185 7.93E-40 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_02945 887b81caff6a10538f52127a7670e0ed 194 Gene3D G3DSA:3.40.630.30 14 190 9.0E-46 T 11-10-2018 AL538_05510 225a554ce033ac814d7b525a1dde6ab6 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.6E-29 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 AL538_27500 a9dfb48eaf8758e43c51c2c1d3c871f1 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 6.7E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_05935 017f34906177e1eeb1ca371b5f8a6f7c 379 Pfam PF02417 Chromate transporter 212 373 3.9E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL538_05935 017f34906177e1eeb1ca371b5f8a6f7c 379 Pfam PF02417 Chromate transporter 3 168 1.8E-33 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AL538_05935 017f34906177e1eeb1ca371b5f8a6f7c 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 8.3E-91 T 11-10-2018 IPR014047 Chromate transporter, long chain AL538_05935 017f34906177e1eeb1ca371b5f8a6f7c 379 PIRSF PIRSF004810 1 379 1.1E-115 T 11-10-2018 IPR014047 Chromate transporter, long chain AL538_16760 14bb8eac7ab90395b0abe055d383e0a8 230 Gene3D G3DSA:3.90.226.10 20 206 2.4E-5 T 11-10-2018 AL538_16760 14bb8eac7ab90395b0abe055d383e0a8 230 SUPERFAMILY SSF52096 27 125 5.97E-5 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_19930 95dba53292b9627305f377120ba3b634 303 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 72 201 1.5E-34 T 11-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AL538_26845 301d7ca5e30c741eb69cc4c66ff53715 287 Pfam PF00753 Metallo-beta-lactamase superfamily 48 173 1.1E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_26845 301d7ca5e30c741eb69cc4c66ff53715 287 SMART SM00849 46 217 6.1E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_26845 301d7ca5e30c741eb69cc4c66ff53715 287 Gene3D G3DSA:3.60.15.10 31 240 2.6E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_26845 301d7ca5e30c741eb69cc4c66ff53715 287 SUPERFAMILY SSF56281 13 286 3.22E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_19780 dfa51aa6147a6d6af220e46c4679e61e 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 5.6E-116 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_19780 dfa51aa6147a6d6af220e46c4679e61e 433 PIRSF PIRSF006066 4 433 4.7E-167 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_19780 dfa51aa6147a6d6af220e46c4679e61e 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 2.6E-138 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 Pfam PF03466 LysR substrate binding domain 94 273 2.1E-16 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 SUPERFAMILY SSF46785 4 112 9.25E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 SUPERFAMILY SSF53850 94 295 8.69E-23 T 11-10-2018 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 Gene3D G3DSA:3.40.190.290 89 296 6.9E-65 T 11-10-2018 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.725 T 11-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 8.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 5.4E-107 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP AL538_06905 a6f39c19f53ffe478f01e5405645f93e 298 Gene3D G3DSA:1.10.10.10 2 85 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 5.2E-93 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 502 3.2E-131 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 SUPERFAMILY SSF81442 43 557 9.29E-175 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23705 8aa549b2d0bfaadd0e9790b9d80759cc 678 Gene3D G3DSA:1.20.210.10 30 560 2.7E-183 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_17840 f28964799462eedafe2bf8326b1df863 294 Gene3D G3DSA:3.40.30.130 11 154 1.4E-40 T 11-10-2018 AL538_17840 f28964799462eedafe2bf8326b1df863 294 Pfam PF13410 Glutathione S-transferase, C-terminal domain 179 250 7.7E-10 T 11-10-2018 AL538_17840 f28964799462eedafe2bf8326b1df863 294 Gene3D G3DSA:1.20.1050.10 155 294 8.9E-49 T 11-10-2018 AL538_17840 f28964799462eedafe2bf8326b1df863 294 SUPERFAMILY SSF52833 27 133 2.09E-8 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_17840 f28964799462eedafe2bf8326b1df863 294 PIRSF PIRSF015753 9 294 9.1E-91 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 AL538_17840 f28964799462eedafe2bf8326b1df863 294 Pfam PF13409 Glutathione S-transferase, N-terminal domain 42 133 9.1E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_17840 f28964799462eedafe2bf8326b1df863 294 SUPERFAMILY SSF47616 155 293 2.65E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_21250 e0e4021dcd86c6415d33a9be1a1f6b12 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 4.2E-22 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AL538_21250 e0e4021dcd86c6415d33a9be1a1f6b12 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 9.2E-23 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 SUPERFAMILY SSF55315 3 77 2.71E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 4.7E-19 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.1E-86 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 Gene3D G3DSA:3.40.1280.10 78 244 6.2E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 Gene3D G3DSA:3.30.1330.30 1 77 1.1E-26 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.103 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 SMART SM00967 5 81 1.5E-19 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 SUPERFAMILY SSF75217 69 244 7.19E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_08045 e8e891c7dcc1ef788eeed64776399bb2 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.6E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_25020 01328d773e174fd023d6565ab9c00837 905 Gene3D G3DSA:2.160.20.10 55 388 3.0E-22 T 11-10-2018 IPR012334 Pectin lyase fold AL538_25020 01328d773e174fd023d6565ab9c00837 905 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 62 402 1.1E-88 T 11-10-2018 IPR022442 Parallel beta-helix repeat-containing domain AL538_25020 01328d773e174fd023d6565ab9c00837 905 Pfam PF05048 Periplasmic copper-binding protein (NosD) 114 321 9.2E-11 T 11-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_25020 01328d773e174fd023d6565ab9c00837 905 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 557 895 5.3E-96 T 11-10-2018 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family AL538_25020 01328d773e174fd023d6565ab9c00837 905 SUPERFAMILY SSF46626 786 897 1.75E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_25020 01328d773e174fd023d6565ab9c00837 905 SUPERFAMILY SSF51126 63 376 6.56E-30 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AL538_25020 01328d773e174fd023d6565ab9c00837 905 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 199 241 1.3E-5 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 227 248 140.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 182 204 8.2 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 359 383 4300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 123 145 1300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 259 305 5500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_25020 01328d773e174fd023d6565ab9c00837 905 SMART SM00710 205 226 770.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AL538_26565 06e9c1aad5ee8e76a5989ec3f0a8f608 289 Pfam PF01497 Periplasmic binding protein 35 264 1.7E-35 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_26565 06e9c1aad5ee8e76a5989ec3f0a8f608 289 Gene3D G3DSA:3.40.50.1980 149 289 2.6E-43 T 11-10-2018 AL538_26565 06e9c1aad5ee8e76a5989ec3f0a8f608 289 SUPERFAMILY SSF53807 33 289 8.24E-49 T 11-10-2018 AL538_26565 06e9c1aad5ee8e76a5989ec3f0a8f608 289 Gene3D G3DSA:3.40.50.1980 29 148 2.9E-34 T 11-10-2018 AL538_00620 58f8e53420b6ca23be1dbb25261eaa4d 781 Gene3D G3DSA:3.40.50.300 453 598 1.8E-10 T 11-10-2018 AL538_00620 58f8e53420b6ca23be1dbb25261eaa4d 781 SUPERFAMILY SSF52540 456 626 4.57E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Gene3D G3DSA:2.40.50.100 57 189 1.9E-68 T 11-10-2018 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Gene3D G3DSA:2.40.420.20 271 352 1.9E-68 T 11-10-2018 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Pfam PF13437 HlyD family secretion protein 155 253 1.6E-7 T 11-10-2018 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 1.3E-65 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Gene3D G3DSA:2.40.30.170 48 270 1.9E-68 T 11-10-2018 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Gene3D G3DSA:1.10.287.470 91 150 1.9E-68 T 11-10-2018 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 361 7.9E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 7.9E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 Pfam PF13533 Biotin-lipoyl like 62 103 5.6E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_16005 3fb46c1bc887d467e9957930c2fbde3b 361 SUPERFAMILY SSF111369 51 265 4.32E-28 T 11-10-2018 AL538_04145 6cff6f1a4b22c66af1acfff4d8f08130 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 2.4E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_04145 6cff6f1a4b22c66af1acfff4d8f08130 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.4E-89 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AL538_04145 6cff6f1a4b22c66af1acfff4d8f08130 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.233 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 AL538_04145 6cff6f1a4b22c66af1acfff4d8f08130 192 PIRSF PIRSF006102 1 192 7.7E-64 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_13690 d888e85e11338d16c23db6ba40cf9270 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 3.0E-24 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AL538_13690 d888e85e11338d16c23db6ba40cf9270 167 Gene3D G3DSA:3.10.129.10 15 156 5.4E-27 T 11-10-2018 AL538_13690 d888e85e11338d16c23db6ba40cf9270 167 SUPERFAMILY SSF54637 10 156 2.39E-23 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 SUPERFAMILY SSF55154 1 224 1.54E-51 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 SMART SM01118 2 208 1.0E-42 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 Pfam PF05235 CHAD domain 237 429 4.1E-7 T 11-10-2018 IPR007899 CHAD domain AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 Pfam PF01928 CYTH domain 3 202 4.8E-32 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 Gene3D G3DSA:2.40.320.10 1 204 2.6E-35 T 11-10-2018 AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 Gene3D G3DSA:1.40.20.10 217 449 1.2E-9 T 11-10-2018 IPR038186 CHAD domain superfamily AL538_11450 5b874ae442da6dd95a26fe71607c6d86 510 SMART SM00880 234 502 1.2E-16 T 11-10-2018 IPR007899 CHAD domain AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 6.3E-85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.711 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_13470 1ea707610fec5dfe6530acd026f1e811 363 Pfam PF02119 Flagellar P-ring protein 22 362 1.4E-138 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_24170 a1b546ac62816d85ccbb633009661c2d 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 4.7E-31 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AL538_24170 a1b546ac62816d85ccbb633009661c2d 110 SUPERFAMILY SSF54913 5 106 1.63E-31 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL538_24170 a1b546ac62816d85ccbb633009661c2d 110 Gene3D G3DSA:3.30.70.120 1 108 1.0E-33 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_25700 43b930b1e6501a3b2bd736f0f31db1e2 226 SUPERFAMILY SSF51206 21 148 3.14E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_25700 43b930b1e6501a3b2bd736f0f31db1e2 226 Gene3D G3DSA:2.60.120.10 12 144 2.6E-14 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_25700 43b930b1e6501a3b2bd736f0f31db1e2 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 113 1.4E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10930 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 11-10-2018 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 2.0E-79 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 SUPERFAMILY SSF55620 10 216 1.41E-74 T 11-10-2018 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 11-10-2018 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 Gene3D G3DSA:1.10.286.10 1 84 9.1E-38 T 11-10-2018 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 Pfam PF01227 GTP cyclohydrolase I 38 215 7.4E-64 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL538_26095 f2e32b9b308237fd7c393ea6df7d45f3 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.855 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 11-10-2018 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AL538_10940 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AL538_13340 c7c8c8de6dbedcbea05ad0d0da0a9829 230 Gene3D G3DSA:2.40.160.40 36 230 5.1E-12 T 11-10-2018 AL538_13340 c7c8c8de6dbedcbea05ad0d0da0a9829 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 82 180 5.8E-6 T 11-10-2018 IPR009331 Oligogalacturonate-specific porin AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 ProSitePatterns PS00211 ABC transporters family signature. 180 194 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 SMART SM00382 62 254 2.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 38 283 4.3E-108 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 Pfam PF00005 ABC transporter 55 207 3.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 Gene3D G3DSA:3.40.50.300 38 281 1.5E-62 T 11-10-2018 AL538_04320 d7fdd8bdc6d74779ac97231f197196fe 283 SUPERFAMILY SSF52540 37 270 9.53E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13700 0518b71d9721f96f74a7a7636454d864 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.1E-18 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 AL538_04065 451f525a225546af09f10c09c405bcfc 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_04065 451f525a225546af09f10c09c405bcfc 336 Pfam PF00005 ABC transporter 44 195 1.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_04065 451f525a225546af09f10c09c405bcfc 336 SUPERFAMILY SSF52540 17 267 3.9E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04065 451f525a225546af09f10c09c405bcfc 336 SMART SM00382 52 245 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04065 451f525a225546af09f10c09c405bcfc 336 Gene3D G3DSA:3.40.50.300 12 336 2.1E-97 T 11-10-2018 AL538_04065 451f525a225546af09f10c09c405bcfc 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 314 2.1E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_04065 451f525a225546af09f10c09c405bcfc 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 5.0E-26 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 SMART SM01133 10 244 6.6E-79 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.72 T 11-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 1.2E-80 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 Gene3D G3DSA:3.20.20.70 1 256 1.2E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 6.8E-48 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 SUPERFAMILY SSF51569 6 245 7.54E-83 T 11-10-2018 AL538_06075 9711f63dc4d6a1dee7b1e5164ea60fb3 258 PIRSF PIRSF001357 5 251 7.9E-77 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AL538_10710 83d294c15238f2f077bf904649bd954e 411 Gene3D G3DSA:3.40.50.11820 35 229 3.3E-29 T 11-10-2018 AL538_10710 83d294c15238f2f077bf904649bd954e 411 Gene3D G3DSA:3.40.50.12580 230 401 1.3E-37 T 11-10-2018 AL538_10710 83d294c15238f2f077bf904649bd954e 411 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 41 407 2.0E-54 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AL538_10710 83d294c15238f2f077bf904649bd954e 411 SUPERFAMILY SSF53756 132 340 5.65E-7 T 11-10-2018 AL538_04650 23e0d780fae702c0caddf3ab1915d340 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 2.4E-75 T 11-10-2018 IPR021372 Protein of unknown function DUF2989 AL538_17385 d066b1645d04122062931dfd6ba85170 376 SUPERFAMILY SSF111369 62 259 2.62E-10 T 11-10-2018 AL538_17385 d066b1645d04122062931dfd6ba85170 376 Gene3D G3DSA:2.40.50.100 62 256 2.6E-35 T 11-10-2018 AL538_17385 d066b1645d04122062931dfd6ba85170 376 Pfam PF13533 Biotin-lipoyl like 65 111 7.7E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_17385 d066b1645d04122062931dfd6ba85170 376 Gene3D G3DSA:1.10.287.470 96 219 2.6E-35 T 11-10-2018 AL538_17385 d066b1645d04122062931dfd6ba85170 376 Gene3D G3DSA:2.40.30.170 257 342 2.6E-35 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 198 2.1E-18 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 2.1E-18 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 316 340 2.1E-18 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 286 298 2.1E-18 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 289 295 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 Pfam PF12161 HsdM N-terminal domain 6 131 5.3E-15 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL538_21535 0bb1021fb869e774d165e1a41972b099 512 Gene3D G3DSA:3.40.50.150 163 493 9.0E-77 T 11-10-2018 AL538_21535 0bb1021fb869e774d165e1a41972b099 512 Gene3D G3DSA:1.20.1260.30 1 162 9.2E-25 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AL538_21535 0bb1021fb869e774d165e1a41972b099 512 SUPERFAMILY SSF53335 5 512 2.41E-117 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_21535 0bb1021fb869e774d165e1a41972b099 512 Pfam PF02384 N-6 DNA Methylase 139 482 5.0E-62 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AL538_23855 cb6c827db4c1b0b91ddb82c0bbb5d2de 611 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 324 2.2E-16 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_23855 cb6c827db4c1b0b91ddb82c0bbb5d2de 611 SUPERFAMILY SSF52540 1 332 5.43E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23855 cb6c827db4c1b0b91ddb82c0bbb5d2de 611 Gene3D G3DSA:3.40.50.300 1 345 8.1E-24 T 11-10-2018 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 SUPERFAMILY SSF52540 319 516 3.37E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 Pfam PF00664 ABC transporter transmembrane region 16 282 2.7E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 Gene3D G3DSA:3.40.50.300 312 525 1.0E-22 T 11-10-2018 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 Gene3D G3DSA:1.20.1560.10 15 311 1.0E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 Pfam PF00005 ABC transporter 337 478 3.4E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 SUPERFAMILY SSF90123 19 310 7.59E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_22855 8c6b5f864715a8bb7c1b441fd1276e50 528 SMART SM00382 341 520 9.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_13745 f9a36f5dea9aed32eabfc7dcb819b1cf 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 4.1E-6 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13745 f9a36f5dea9aed32eabfc7dcb819b1cf 114 Gene3D G3DSA:1.20.1300.10 1 114 5.2E-28 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13745 f9a36f5dea9aed32eabfc7dcb819b1cf 114 SUPERFAMILY SSF81343 4 113 1.23E-25 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13745 f9a36f5dea9aed32eabfc7dcb819b1cf 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 7.4E-35 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL538_13745 f9a36f5dea9aed32eabfc7dcb819b1cf 114 PIRSF PIRSF000169 1 114 5.7E-38 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AL538_04570 db64061179a3b5b17c9ab328730a6c0c 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 7.4E-162 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 AL538_04570 db64061179a3b5b17c9ab328730a6c0c 478 Pfam PF03553 Na+/H+ antiporter family 161 453 1.3E-65 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL538_16160 eaba899f6ee70458a5a4e54cf7925146 171 SUPERFAMILY SSF55729 1 153 6.45E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_16160 eaba899f6ee70458a5a4e54cf7925146 171 Gene3D G3DSA:3.40.630.30 4 167 1.7E-34 T 11-10-2018 AL538_16160 eaba899f6ee70458a5a4e54cf7925146 171 Pfam PF00583 Acetyltransferase (GNAT) family 40 143 6.1E-15 T 11-10-2018 IPR000182 GNAT domain AL538_18715 c49837f33676269e747a261e0efb3819 392 SMART SM00495 349 392 9.0E-8 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_18715 c49837f33676269e747a261e0efb3819 392 Gene3D G3DSA:2.70.50.50 26 219 3.1E-64 T 11-10-2018 AL538_18715 c49837f33676269e747a261e0efb3819 392 SUPERFAMILY SSF51055 344 389 1.44E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AL538_18715 c49837f33676269e747a261e0efb3819 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 1.4E-36 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AL538_18715 c49837f33676269e747a261e0efb3819 392 Gene3D G3DSA:2.10.10.20 349 392 3.9E-19 T 11-10-2018 AL538_18715 c49837f33676269e747a261e0efb3819 392 Gene3D G3DSA:3.30.70.2150 247 329 4.7E-5 T 11-10-2018 AL538_18715 c49837f33676269e747a261e0efb3819 392 SUPERFAMILY SSF81296 26 217 1.13E-49 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 SUPERFAMILY SSF55073 278 444 1.88E-31 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 Gene3D G3DSA:3.30.70.270 271 447 2.9E-35 T 11-10-2018 AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 444 5.1E-30 T 11-10-2018 IPR000160 GGDEF domain AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 Gene3D G3DSA:1.20.1480.50 180 270 1.3E-6 T 11-10-2018 AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 SMART SM00267 262 445 2.0E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_24640 a2e333020171ba606af3740f6d8d8f96 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 440 1.6E-29 T 11-10-2018 IPR000160 GGDEF domain AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 SUPERFAMILY SSF111369 119 174 3.66E-6 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 5.9E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 SUPERFAMILY SSF111369 185 264 5.23E-12 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 Gene3D G3DSA:1.10.287.470 117 174 5.3E-6 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 Gene3D G3DSA:1.10.287.470 87 112 1.5E-8 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 SUPERFAMILY SSF111369 52 131 3.14E-9 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 Gene3D G3DSA:2.40.50.100 54 86 1.5E-8 T 11-10-2018 AL538_18660 196e91928af4c60f0e5590e740b3e03f 341 Gene3D G3DSA:2.40.30.170 223 340 1.1E-33 T 11-10-2018 AL538_05275 c962419c13545bf2e0ae4e49ecd2a933 116 Pfam PF03960 ArsC family 6 115 2.2E-19 T 11-10-2018 IPR006660 Arsenate reductase-like AL538_05275 c962419c13545bf2e0ae4e49ecd2a933 116 SUPERFAMILY SSF52833 2 116 1.02E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_05275 c962419c13545bf2e0ae4e49ecd2a933 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 9.3E-48 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AL538_05275 c962419c13545bf2e0ae4e49ecd2a933 116 Gene3D G3DSA:3.40.30.10 1 116 2.5E-48 T 11-10-2018 AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 PRINTS PR01021 OMPA domain signature 114 129 2.4E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 PRINTS PR01021 OMPA domain signature 129 145 2.4E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 PRINTS PR01021 OMPA domain signature 84 106 2.4E-6 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 Gene3D G3DSA:3.30.1330.60 57 189 1.0E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 SUPERFAMILY SSF103088 54 182 3.01E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_17085 3d097a1a3d5a428173872b65da28edb7 206 Pfam PF00691 OmpA family 83 178 6.9E-17 T 11-10-2018 IPR006665 OmpA-like domain AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 Gene3D G3DSA:1.10.10.10 4 73 9.8E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 SMART SM00895 82 211 2.0E-4 T 11-10-2018 IPR011711 GntR, C-terminal AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 Pfam PF07729 FCD domain 82 209 1.3E-13 T 11-10-2018 IPR011711 GntR, C-terminal AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 SUPERFAMILY SSF48008 78 218 8.89E-14 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 5.7E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 SMART SM00345 14 72 4.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 Gene3D G3DSA:1.20.120.530 76 223 1.8E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_11285 c7fc1e0be43c72539ac4ce79e3d81a24 225 SUPERFAMILY SSF46785 5 80 2.95E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_07960 b32310d6ed2b4cf84ffae417bed4ed93 195 Pfam PF02525 Flavodoxin-like fold 10 176 3.5E-41 T 11-10-2018 IPR003680 Flavodoxin-like fold AL538_07960 b32310d6ed2b4cf84ffae417bed4ed93 195 SUPERFAMILY SSF52218 9 181 1.02E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_07960 b32310d6ed2b4cf84ffae417bed4ed93 195 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 189 50.531 T 11-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL538_07960 b32310d6ed2b4cf84ffae417bed4ed93 195 Gene3D G3DSA:3.40.50.360 10 185 2.0E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_06980 0ecdf7d0ab56c4b39d12446ccce352a5 187 SUPERFAMILY SSF143456 1 187 1.07E-67 T 11-10-2018 AL538_06980 0ecdf7d0ab56c4b39d12446ccce352a5 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 4.9E-51 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AL538_06980 0ecdf7d0ab56c4b39d12446ccce352a5 187 Gene3D G3DSA:3.40.1740.10 1 187 2.1E-70 T 11-10-2018 AL538_06980 0ecdf7d0ab56c4b39d12446ccce352a5 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.502 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 6.8E-180 T 11-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 11-10-2018 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Gene3D G3DSA:3.30.70.2010 1 130 2.2E-38 T 11-10-2018 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 SUPERFAMILY SSF51161 90 324 6.24E-35 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 AL538_05815 62a27317dd58b40d35b8d18362f851a2 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.987 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 8.4E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 8.4E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 8.4E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 8.4E-18 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 SUPERFAMILY SSF56322 8 452 3.79E-141 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 153 7.6E-28 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 Gene3D G3DSA:3.60.120.10 4 454 5.6E-169 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 Pfam PF00425 chorismate binding enzyme 191 444 7.7E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AL538_02975 cfda5c0d538ee3f168a8c82c58b7b005 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 3.5E-123 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.1E-65 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 499 1.4E-21 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 SUPERFAMILY SSF55604 439 511 5.23E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 Pfam PF00367 phosphotransferase system, EIIB 441 474 2.9E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 510 5.1E-211 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AL538_13670 08307d20d8f1ba0b1bf952c56b474914 524 Gene3D G3DSA:3.30.1360.60 435 513 8.8E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 534 3.6E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 SMART SM00267 365 538 7.7E-53 T 11-10-2018 IPR000160 GGDEF domain AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 Gene3D G3DSA:3.30.450.20 88 221 1.9E-47 T 11-10-2018 AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 Gene3D G3DSA:3.30.70.270 370 538 4.7E-50 T 11-10-2018 AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 SUPERFAMILY SSF55073 381 537 1.8E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 Gene3D G3DSA:3.30.450.20 226 310 4.7E-8 T 11-10-2018 AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 Pfam PF02743 Cache domain 43 287 1.4E-15 T 11-10-2018 IPR033479 Double Cache domain 1 AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 SUPERFAMILY SSF103190 225 328 5.1E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 SUPERFAMILY SSF103190 45 219 1.44E-49 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily AL538_25635 a8fb635da54f8ae4e20a32bc21ac3cba 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 537 1.7E-39 T 11-10-2018 IPR000160 GGDEF domain AL538_22620 d646a81db006fffde86f838271cf1c2a 300 Gene3D G3DSA:1.20.1640.10 95 290 6.0E-9 T 11-10-2018 AL538_22620 d646a81db006fffde86f838271cf1c2a 300 Pfam PF07549 SecD/SecF GG Motif 29 55 8.0E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL538_22620 d646a81db006fffde86f838271cf1c2a 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 3.5E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 3.5E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 3.5E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 3.5E-24 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.809 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL538_22620 d646a81db006fffde86f838271cf1c2a 300 Pfam PF02355 Protein export membrane protein 102 284 1.0E-53 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 SUPERFAMILY SSF82866 102 283 2.49E-34 T 11-10-2018 AL538_22620 d646a81db006fffde86f838271cf1c2a 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 274 9.6E-46 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL538_22620 d646a81db006fffde86f838271cf1c2a 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.1E-62 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AL538_22400 f33b74b0f4da672922f9290b3142dbd8 205 SUPERFAMILY SSF53474 3 180 1.27E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14985 3e33e55184b4894eeff6d38446b560ec 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 7.8E-26 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_14985 3e33e55184b4894eeff6d38446b560ec 346 Gene3D G3DSA:3.30.360.10 126 328 5.6E-115 T 11-10-2018 AL538_14985 3e33e55184b4894eeff6d38446b560ec 346 SUPERFAMILY SSF51735 2 198 6.56E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_14985 3e33e55184b4894eeff6d38446b560ec 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 239 8.2E-15 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 AL538_14985 3e33e55184b4894eeff6d38446b560ec 346 Gene3D G3DSA:3.40.50.720 4 314 5.6E-115 T 11-10-2018 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 Gene3D G3DSA:3.40.1010.10 41 157 1.4E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 122 155 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 Gene3D G3DSA:3.30.950.10 158 295 8.3E-45 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 44 253 3.2E-45 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 SUPERFAMILY SSF53790 38 285 6.02E-79 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 47 61 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_11000 27ce8ece4490626aebc98e37e9b1ec7f 296 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 42 275 3.0E-93 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 6.0E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Gene3D G3DSA:3.40.50.300 269 415 4.6E-50 T 11-10-2018 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.3E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Gene3D G3DSA:3.40.50.300 416 597 8.7E-51 T 11-10-2018 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 SUPERFAMILY SSF46600 625 672 1.57E-10 T 11-10-2018 IPR036876 UVR domain superfamily AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Pfam PF00271 Helicase conserved C-terminal domain 442 545 2.3E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 SMART SM00487 9 427 1.1E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Gene3D G3DSA:4.10.860.10 618 676 6.6E-20 T 11-10-2018 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.77 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 SMART SM00490 461 547 1.2E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Gene3D G3DSA:3.40.50.300 1 233 1.3E-72 T 11-10-2018 AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 SUPERFAMILY SSF52540 5 416 3.83E-137 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 SUPERFAMILY SSF52540 37 582 6.02E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04130 ed8f8439b87238eb6e702233f42cbf02 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 8.0E-20 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AL538_00320 ce00c5202f9a789d75badb2dc4e41dde 185 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 25 183 4.1E-25 T 11-10-2018 IPR013382 CRISPR-associated protein Cse2 AL538_00320 ce00c5202f9a789d75badb2dc4e41dde 185 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 41 181 9.4E-18 T 11-10-2018 IPR013382 CRISPR-associated protein Cse2 AL538_00320 ce00c5202f9a789d75badb2dc4e41dde 185 Gene3D G3DSA:1.10.520.40 13 185 2.4E-28 T 11-10-2018 IPR038287 Cse2 superfamily AL538_02075 539646365c334aaa65df237d29db3364 263 Gene3D G3DSA:2.50.20.10 25 261 1.4E-97 T 11-10-2018 AL538_02075 539646365c334aaa65df237d29db3364 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 9.6E-67 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein AL538_27410 1496eea782bb42a34c65f1ac026ce73b 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 7.1E-29 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 AL538_15220 91e238347a438760064d6cab85de2e02 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 4.4E-92 T 11-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 4.1E-71 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_15220 91e238347a438760064d6cab85de2e02 216 Pfam PF00813 FliP family 14 211 2.2E-68 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_14765 5f077c8dd5754eef55ec1e0d898cc4bf 233 SUPERFAMILY SSF55729 81 232 3.18E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_14765 5f077c8dd5754eef55ec1e0d898cc4bf 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 2.0E-19 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AL538_14765 5f077c8dd5754eef55ec1e0d898cc4bf 233 PIRSF PIRSF037208 1 233 1.3E-86 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AL538_14765 5f077c8dd5754eef55ec1e0d898cc4bf 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 107 226 6.6E-33 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AL538_14765 5f077c8dd5754eef55ec1e0d898cc4bf 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 36.79 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AL538_24930 ae744cf2b05a037dad41807ddd20c1af 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 7 441 4.0E-133 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_24930 ae744cf2b05a037dad41807ddd20c1af 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 1.3E-118 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Gene3D G3DSA:1.20.20.10 1 78 1.0E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.8E-27 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 4.7E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 4.7E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 4.7E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 SUPERFAMILY SSF81333 2 76 9.29E-17 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.56 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AL538_23145 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Pfam PF00137 ATP synthase subunit C 11 73 9.3E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 SUPERFAMILY SSF53155 4 80 2.35E-19 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 Gene3D G3DSA:3.30.160.70 3 71 1.6E-18 T 11-10-2018 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 4.5E-38 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 Gene3D G3DSA:1.10.10.10 75 158 2.3E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 SUPERFAMILY SSF46767 75 156 4.58E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 2.1E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 72 6.2E-8 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AL538_19020 80c2dbe78634af1e20b83d14c5255b04 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.667 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AL538_03755 eb4913aecee62c41efc35e077ebd3396 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.611 T 11-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 AL538_03755 eb4913aecee62c41efc35e077ebd3396 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 6.5E-18 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AL538_15735 bf1d545c12153d2cd56cdadd13fae49f 273 Pfam PF07103 Protein of unknown function (DUF1365) 9 246 1.1E-68 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 AL538_02815 e2887941d70c83467b0a7bf3609aa43c 104 Pfam PF04266 ASCH domain 6 101 5.8E-13 T 11-10-2018 IPR007374 ASCH domain AL538_02815 e2887941d70c83467b0a7bf3609aa43c 104 PIRSF PIRSF029143 1 104 5.0E-42 T 11-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 AL538_02815 e2887941d70c83467b0a7bf3609aa43c 104 SMART SM01022 5 104 9.5E-24 T 11-10-2018 IPR007374 ASCH domain AL538_02815 e2887941d70c83467b0a7bf3609aa43c 104 Gene3D G3DSA:2.30.130.30 1 103 1.5E-38 T 11-10-2018 AL538_02815 e2887941d70c83467b0a7bf3609aa43c 104 SUPERFAMILY SSF88697 2 103 3.48E-30 T 11-10-2018 IPR015947 PUA-like superfamily AL538_12465 2a940f707e8cc38b2d4fc268e9ffae7d 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL538_12465 2a940f707e8cc38b2d4fc268e9ffae7d 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 177 1.5E-36 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 AL538_09070 283fab9c723ca80673d7700e75cdadcf 204 Pfam PF01810 LysE type translocator 15 202 2.0E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_09070 283fab9c723ca80673d7700e75cdadcf 204 PIRSF PIRSF006324 1 204 1.7E-54 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_24385 3219e0ab47c91e6e738e3e4fe407d32e 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 1.4E-72 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AL538_24385 3219e0ab47c91e6e738e3e4fe407d32e 229 SUPERFAMILY SSF161098 6 217 3.14E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL538_24385 3219e0ab47c91e6e738e3e4fe407d32e 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 211 2.6E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_24385 3219e0ab47c91e6e738e3e4fe407d32e 229 Gene3D G3DSA:1.10.3720.10 3 224 9.3E-60 T 11-10-2018 IPR035906 MetI-like superfamily AL538_28550 551e74b45066579020b13b1ae93574ff 146 Pfam PF04519 Polymer-forming cytoskeletal 18 112 2.5E-24 T 11-10-2018 IPR007607 Bactofilin A/B AL538_04095 2a8e9c70cbc79ad77e1c5b500905c33b 85 Gene3D G3DSA:3.10.20.30 1 85 6.3E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AL538_04095 2a8e9c70cbc79ad77e1c5b500905c33b 85 SUPERFAMILY SSF54285 1 85 1.61E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL538_04095 2a8e9c70cbc79ad77e1c5b500905c33b 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 9.0E-21 T 11-10-2018 AL538_04095 2a8e9c70cbc79ad77e1c5b500905c33b 85 Pfam PF02597 ThiS family 4 85 6.3E-21 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 3.7E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 Gene3D G3DSA:3.30.70.270 320 486 1.5E-43 T 11-10-2018 AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 SMART SM00267 321 486 4.3E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 SUPERFAMILY SSF55073 337 486 5.89E-36 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 Gene3D G3DSA:3.30.450.20 146 243 3.5E-5 T 11-10-2018 AL538_04010 d0cfdb6e1d4320c0173d350189398a31 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 484 2.4E-40 T 11-10-2018 IPR000160 GGDEF domain AL538_04880 28fde8343312e8f361eac321cdcedb39 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.7E-144 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 SUPERFAMILY SSF103263 4 356 1.96E-150 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.773 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 Pfam PF01264 Chorismate synthase 10 345 1.8E-144 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 PIRSF PIRSF001456 3 360 3.8E-144 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_04880 28fde8343312e8f361eac321cdcedb39 361 Gene3D G3DSA:3.60.150.10 1 361 3.8E-161 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AL538_10155 a4122fb6b442373d896ed007dfd23558 181 Pfam PF04220 Der GTPase activator (YihI) 21 171 8.3E-46 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AL538_10155 a4122fb6b442373d896ed007dfd23558 181 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 174 16.778 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 SUPERFAMILY SSF160544 244 343 4.97E-21 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 7.4E-25 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 218 235 7.4E-25 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 261 276 7.4E-25 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 198 216 7.4E-25 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 291 312 7.4E-25 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 335 1.4E-72 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AL538_00405 28ace7d17e21e1ea80fc2fbb54182b61 345 Gene3D G3DSA:3.40.1690.10 207 345 2.4E-35 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Gene3D G3DSA:3.10.20.310 20 96 6.1E-25 T 11-10-2018 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Pfam PF17243 POTRA domain TamA domain 1 25 95 2.7E-21 T 11-10-2018 IPR035243 TamA, POTRA domain 1 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Pfam PF07244 Surface antigen variable number repeat 105 177 1.1E-4 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Gene3D G3DSA:3.10.20.310 97 184 1.6E-29 T 11-10-2018 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Gene3D G3DSA:3.10.20.310 185 261 4.5E-18 T 11-10-2018 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Pfam PF01103 Surface antigen 276 567 1.4E-30 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL538_11065 e5d8d765a6d388222476fadd9eb1f069 570 Gene3D G3DSA:2.40.160.50 262 570 1.5E-98 T 11-10-2018 AL538_20275 9d1e89f18f47975cbc3a24cb048302af 204 Gene3D G3DSA:3.20.20.70 1 204 3.2E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_20275 9d1e89f18f47975cbc3a24cb048302af 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 3.8E-65 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20275 9d1e89f18f47975cbc3a24cb048302af 204 SUPERFAMILY SSF51391 3 202 2.75E-68 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20275 9d1e89f18f47975cbc3a24cb048302af 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 1.0E-65 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20275 9d1e89f18f47975cbc3a24cb048302af 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.699 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_00535 c4e04a429e5696d83b7d6d865fc0d7a4 144 SUPERFAMILY SSF55811 5 131 2.84E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_00535 c4e04a429e5696d83b7d6d865fc0d7a4 144 Pfam PF00293 NUDIX domain 8 110 4.8E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_00535 c4e04a429e5696d83b7d6d865fc0d7a4 144 Gene3D G3DSA:3.90.79.10 4 136 1.9E-13 T 11-10-2018 AL538_12195 a00e2f7722a07a42302407c54158853c 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.1E-113 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AL538_12195 a00e2f7722a07a42302407c54158853c 229 SMART SM00448 3 116 2.0E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_12195 a00e2f7722a07a42302407c54158853c 229 SMART SM00862 150 225 1.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_12195 a00e2f7722a07a42302407c54158853c 229 SUPERFAMILY SSF52172 3 183 4.23E-43 T 11-10-2018 IPR011006 CheY-like superfamily AL538_12195 a00e2f7722a07a42302407c54158853c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_12195 a00e2f7722a07a42302407c54158853c 229 Gene3D G3DSA:3.40.50.2300 1 126 8.5E-39 T 11-10-2018 AL538_12195 a00e2f7722a07a42302407c54158853c 229 Gene3D G3DSA:1.10.10.10 127 228 3.1E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_12195 a00e2f7722a07a42302407c54158853c 229 Pfam PF00072 Response regulator receiver domain 5 116 8.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PIRSF PIRSF000722 1 397 5.8E-146 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 187.005 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 SUPERFAMILY SSF53067 157 395 1.3E-84 T 11-10-2018 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 8.4E-171 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 SUPERFAMILY SSF53067 3 195 2.78E-63 T 11-10-2018 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 Pfam PF00871 Acetokinase family 5 390 9.6E-165 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 Gene3D G3DSA:3.30.420.40 2 194 1.8E-72 T 11-10-2018 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 Gene3D G3DSA:3.30.420.40 195 397 4.2E-82 T 11-10-2018 AL538_04045 9b4fa942fea3900b2857345b596eb725 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 Gene3D G3DSA:1.10.287.470 118 184 1.9E-9 T 11-10-2018 AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 SUPERFAMILY SSF111369 189 295 4.05E-7 T 11-10-2018 AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 Gene3D G3DSA:2.40.30.170 226 350 4.7E-26 T 11-10-2018 AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 Gene3D G3DSA:2.40.50.100 56 117 1.7E-9 T 11-10-2018 AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 286 1.1E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_01850 be2c6673c7e6c3412b685932230ec9c3 368 SUPERFAMILY SSF111369 56 181 4.71E-12 T 11-10-2018 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 Gene3D G3DSA:3.40.50.720 155 288 2.7E-119 T 11-10-2018 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 Gene3D G3DSA:3.90.180.10 22 330 2.7E-119 T 11-10-2018 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 SUPERFAMILY SSF50129 3 175 2.59E-53 T 11-10-2018 IPR011032 GroES-like superfamily AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 1.0E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 61.021 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 SUPERFAMILY SSF51735 143 307 7.07E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 SMART SM00829 14 340 6.2E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_21505 d9da17500f13cdcaf040db1fa8854036 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 4.2E-181 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 Gene3D G3DSA:3.40.930.10 106 251 3.3E-18 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 PIRSF PIRSF029195 1 258 4.5E-167 T 11-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 4.2E-21 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 SUPERFAMILY SSF55804 127 249 7.59E-19 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 Pfam PF00381 PTS HPr component phosphorylation site 17 84 1.2E-4 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 Gene3D G3DSA:3.30.1340.10 9 89 1.2E-7 T 11-10-2018 IPR035895 HPr-like superfamily AL538_22015 23182bf4a4ce50cde70035580d8904b2 258 SUPERFAMILY SSF55594 11 88 1.7E-12 T 11-10-2018 IPR035895 HPr-like superfamily AL538_05260 4b1120198e81b3d8779d5ffef9e95189 356 Pfam PF01594 AI-2E family transporter 20 345 4.3E-74 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 Pfam PF03652 Holliday junction resolvase 4 136 1.2E-35 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 Gene3D G3DSA:3.30.420.140 1 138 4.6E-39 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 SUPERFAMILY SSF53098 3 137 3.03E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 SMART SM00732 3 104 4.7E-35 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.098 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL538_06985 ab3db121f311a05e33f8d9b7f783c02f 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.1E-48 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AL538_13680 2dfb06c9ee8701af750f0bc7cacd475d 195 SUPERFAMILY SSF54523 9 81 1.26E-12 T 11-10-2018 AL538_13680 2dfb06c9ee8701af750f0bc7cacd475d 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_13680 2dfb06c9ee8701af750f0bc7cacd475d 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.0E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_13680 2dfb06c9ee8701af750f0bc7cacd475d 195 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_13680 2dfb06c9ee8701af750f0bc7cacd475d 195 Gene3D G3DSA:3.30.700.10 9 138 1.0E-12 T 11-10-2018 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.9E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 Gene3D G3DSA:3.40.190.80 161 264 3.5E-26 T 11-10-2018 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 4.0E-106 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 Gene3D G3DSA:3.30.540.10 6 160 2.7E-45 T 11-10-2018 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.242 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 AL538_10310 02e629d4d9a30d3eacb0b06781e2c58b 275 SUPERFAMILY SSF56655 6 272 1.18E-77 T 11-10-2018 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 SUPERFAMILY SSF63411 45 254 1.62E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 SUPERFAMILY SSF63411 735 936 3.0E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Gene3D G3DSA:3.30.830.10 270 468 2.4E-33 T 11-10-2018 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 SUPERFAMILY SSF63411 272 464 3.5E-31 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Gene3D G3DSA:3.30.830.10 521 726 7.2E-41 T 11-10-2018 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Pfam PF05193 Peptidase M16 inactive domain 215 391 3.0E-31 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Pfam PF05193 Peptidase M16 inactive domain 682 855 3.2E-21 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 2.6E-9 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Pfam PF00675 Insulinase (Peptidase family M16) 60 174 5.6E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 SUPERFAMILY SSF63411 515 717 4.3E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Gene3D G3DSA:3.30.830.10 43 267 2.0E-66 T 11-10-2018 AL538_06590 a99b4abd7fe7da2334e850f37ec6ae30 947 Gene3D G3DSA:3.30.830.10 740 930 1.3E-36 T 11-10-2018 AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 SMART SM00858 44 106 1.3E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 Gene3D G3DSA:3.90.1210.10 43 106 3.0E-5 T 11-10-2018 AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 8 225 2.6E-71 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 Pfam PF08666 SAF domain 45 101 8.0E-12 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 114 215 3.5E-28 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AL538_05995 42fffc3a99d8389057fe6557450c6ddb 248 SUPERFAMILY SSF51269 47 101 3.34E-6 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 AL538_03310 016d4b08c5444d22b96fce61e002a2f3 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL538_03310 016d4b08c5444d22b96fce61e002a2f3 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 6.5E-54 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL538_03310 016d4b08c5444d22b96fce61e002a2f3 185 PIRSF PIRSF000847 1 184 6.2E-46 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AL538_03310 016d4b08c5444d22b96fce61e002a2f3 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AL538_03310 016d4b08c5444d22b96fce61e002a2f3 185 Gene3D G3DSA:1.20.120.1760 2 180 7.1E-17 T 11-10-2018 AL538_14685 574983eb2d2737416d14fe74b92fcf5d 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 3.0E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_14685 574983eb2d2737416d14fe74b92fcf5d 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.8E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_14685 574983eb2d2737416d14fe74b92fcf5d 246 SUPERFAMILY SSF161098 11 233 9.16E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL538_14685 574983eb2d2737416d14fe74b92fcf5d 246 Gene3D G3DSA:1.10.3720.10 3 243 5.2E-50 T 11-10-2018 IPR035906 MetI-like superfamily AL538_14225 6cc9d314c21c761751299e4c72806e9a 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 4.6E-85 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_14225 6cc9d314c21c761751299e4c72806e9a 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.3E-117 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL538_14225 6cc9d314c21c761751299e4c72806e9a 453 PIRSF PIRSF006066 1 267 2.4E-91 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_14225 6cc9d314c21c761751299e4c72806e9a 453 PIRSF PIRSF006066 272 447 5.0E-49 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AL538_01040 c6e48bea806ba8d004bada119edb5b7b 182 SUPERFAMILY SSF55154 8 180 8.18E-38 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 AL538_01040 c6e48bea806ba8d004bada119edb5b7b 182 Pfam PF01928 CYTH domain 11 175 2.9E-20 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL538_01040 c6e48bea806ba8d004bada119edb5b7b 182 Gene3D G3DSA:2.40.320.10 2 182 6.7E-49 T 11-10-2018 AL538_01040 c6e48bea806ba8d004bada119edb5b7b 182 SMART SM01118 10 181 4.4E-18 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AL538_01040 c6e48bea806ba8d004bada119edb5b7b 182 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 2.0E-8 T 11-10-2018 AL538_16505 b627ec7d3a5a90c64ef511483573601f 514 SUPERFAMILY SSF51998 18 468 5.49E-100 T 11-10-2018 AL538_16505 b627ec7d3a5a90c64ef511483573601f 514 PIRSF PIRSF028991 5 514 6.6E-287 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL538_16505 b627ec7d3a5a90c64ef511483573601f 514 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 502 3.9E-232 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL538_16505 b627ec7d3a5a90c64ef511483573601f 514 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 1.9E-230 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted AL538_16895 c5bafb32157e2a1d3da59f9b617e52ba 132 SUPERFAMILY SSF51316 1 121 3.45E-30 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_16895 c5bafb32157e2a1d3da59f9b617e52ba 132 Gene3D G3DSA:2.170.150.70 1 108 1.4E-11 T 11-10-2018 AL538_16895 c5bafb32157e2a1d3da59f9b617e52ba 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 22 104 5.2E-13 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL538_01575 6d7fe28ffbd6b8cc9d1bbb03e3003ebe 251 SUPERFAMILY SSF52096 43 128 3.48E-6 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_01575 6d7fe28ffbd6b8cc9d1bbb03e3003ebe 251 Gene3D G3DSA:3.90.226.10 25 201 6.4E-6 T 11-10-2018 AL538_17390 1fc48bff662fdf575b05349e790928ba 182 Hamap MF_01572 UPF0397 protein . 1 182 21.052 T 11-10-2018 IPR022914 Protein of unknown function UPF0397 AL538_17390 1fc48bff662fdf575b05349e790928ba 182 Gene3D G3DSA:1.10.1760.20 1 177 2.8E-19 T 11-10-2018 AL538_17390 1fc48bff662fdf575b05349e790928ba 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 7.2E-44 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 AL538_01205 e05491de64220bc84dac0134a4284aff 711 Gene3D G3DSA:2.40.170.20 168 711 5.3E-131 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_01205 e05491de64220bc84dac0134a4284aff 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 3.4E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_01205 e05491de64220bc84dac0134a4284aff 711 SUPERFAMILY SSF56935 26 711 5.76E-134 T 11-10-2018 AL538_01205 e05491de64220bc84dac0134a4284aff 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 56 711 7.7E-121 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_01205 e05491de64220bc84dac0134a4284aff 711 Gene3D G3DSA:2.170.130.10 34 167 4.9E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_01205 e05491de64220bc84dac0134a4284aff 711 Pfam PF00593 TonB dependent receptor 229 710 1.7E-51 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_15780 74487574bd35fb2b7728340177d29164 434 SUPERFAMILY SSF53613 31 417 9.67E-44 T 11-10-2018 IPR029056 Ribokinase-like AL538_15780 74487574bd35fb2b7728340177d29164 434 Pfam PF00294 pfkB family carbohydrate kinase 77 293 1.6E-10 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 Gene3D G3DSA:3.30.1300.30 42 309 5.7E-93 T 11-10-2018 AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 Gene3D G3DSA:1.10.40.60 99 215 5.7E-93 T 11-10-2018 IPR038072 GspK, central domain superfamily AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 SUPERFAMILY SSF158544 101 213 1.8E-33 T 11-10-2018 IPR038072 GspK, central domain superfamily AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 SUPERFAMILY SSF158544 215 282 2.62E-19 T 11-10-2018 IPR038072 GspK, central domain superfamily AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 SUPERFAMILY SSF54523 36 325 6.28E-37 T 11-10-2018 AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.5E-89 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 PIRSF PIRSF002786 1 328 1.5E-69 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AL538_10290 2b97a7f0de8ae08ff51eb02f29b890ba 336 Gene3D G3DSA:1.10.40.60 216 285 5.7E-93 T 11-10-2018 IPR038072 GspK, central domain superfamily AL538_18155 759044ce8bd48bc01088d8074a4fa192 162 Gene3D G3DSA:3.40.630.30 6 162 4.6E-28 T 11-10-2018 AL538_18155 759044ce8bd48bc01088d8074a4fa192 162 SUPERFAMILY SSF55729 1 156 5.24E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_18155 759044ce8bd48bc01088d8074a4fa192 162 Pfam PF00583 Acetyltransferase (GNAT) family 34 149 8.1E-16 T 11-10-2018 IPR000182 GNAT domain AL538_16885 7e6ad97da9785f37d300732baeb1d789 166 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 22 157 7.8E-16 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 AL538_27980 57795e605e506fff96d41a0e4cda37b2 156 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 99 138 1.9E-11 T 11-10-2018 IPR032869 WHH domain-containing protein AL538_25825 fb94d27e2a7414d09053b70b745b4730 155 Gene3D G3DSA:3.30.300.20 1 154 1.3E-49 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_25825 fb94d27e2a7414d09053b70b745b4730 155 SUPERFAMILY SSF82784 1 153 8.9E-49 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AL538_25825 fb94d27e2a7414d09053b70b745b4730 155 Pfam PF02566 OsmC-like protein 55 152 9.4E-16 T 11-10-2018 IPR003718 OsmC/Ohr family AL538_13860 d383fe480ed3a5eea2417598e66cca0e 284 SUPERFAMILY SSF53474 2 282 1.61E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_13860 d383fe480ed3a5eea2417598e66cca0e 284 Pfam PF00561 alpha/beta hydrolase fold 27 133 1.8E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_13860 d383fe480ed3a5eea2417598e66cca0e 284 Gene3D G3DSA:3.40.50.1820 1 278 2.3E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_23355 d870b50c6d7d993cbc4c116c5bd90bde 525 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 498 1.5E-78 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL538_23355 d870b50c6d7d993cbc4c116c5bd90bde 525 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 247 498 3.4E-66 T 11-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 AL538_23355 d870b50c6d7d993cbc4c116c5bd90bde 525 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 1.1E-26 T 11-10-2018 IPR010657 ImpA, N-terminal AL538_00685 21ba88a9edfa695ca74a0d1fd197232e 243 Gene3D G3DSA:3.30.1600.10 22 158 9.2E-81 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AL538_00685 21ba88a9edfa695ca74a0d1fd197232e 243 Pfam PF02146 Sir2 family 13 186 3.1E-50 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AL538_00685 21ba88a9edfa695ca74a0d1fd197232e 243 SUPERFAMILY SSF52467 6 234 1.4E-72 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_00685 21ba88a9edfa695ca74a0d1fd197232e 243 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.358 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AL538_00685 21ba88a9edfa695ca74a0d1fd197232e 243 Gene3D G3DSA:3.40.50.1220 8 225 9.2E-81 T 11-10-2018 AL538_28660 0fa5daf461a1859fe17d0a7a18f55aab 51 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 8.0E-19 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL538_28660 0fa5daf461a1859fe17d0a7a18f55aab 51 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 51 17.007 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL538_28660 0fa5daf461a1859fe17d0a7a18f55aab 51 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.5E-26 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 SUPERFAMILY SSF53850 89 293 7.87E-48 T 11-10-2018 AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 Pfam PF03466 LysR substrate binding domain 88 287 5.5E-45 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 Gene3D G3DSA:1.10.10.10 1 83 5.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 Gene3D G3DSA:3.40.190.10 91 286 3.0E-67 T 11-10-2018 AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 Gene3D G3DSA:3.40.190.10 162 260 3.0E-67 T 11-10-2018 AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21940 adce7c3dc625bc94cfa9b171a5b2dab8 304 SUPERFAMILY SSF46785 1 111 1.55E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15420 9aad300d072560627eb953f325d51f4b 639 SUPERFAMILY SSF56935 41 639 1.36E-117 T 11-10-2018 AL538_15420 9aad300d072560627eb953f325d51f4b 639 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 622 639 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_15420 9aad300d072560627eb953f325d51f4b 639 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 11-10-2018 IPR010916 TonB box, conserved site AL538_15420 9aad300d072560627eb953f325d51f4b 639 Gene3D G3DSA:2.40.170.20 174 639 1.4E-123 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_15420 9aad300d072560627eb953f325d51f4b 639 Pfam PF00593 TonB dependent receptor 227 636 8.7E-58 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_15420 9aad300d072560627eb953f325d51f4b 639 Gene3D G3DSA:2.170.130.10 40 168 9.1E-41 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_15420 9aad300d072560627eb953f325d51f4b 639 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 9.9E-27 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_04530 0f1c7cd50ee676eb57b5901d469f8fb2 111 SUPERFAMILY SSF52833 1 104 3.14E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_04530 0f1c7cd50ee676eb57b5901d469f8fb2 111 PIRSF PIRSF005894 1 107 8.6E-52 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AL538_04530 0f1c7cd50ee676eb57b5901d469f8fb2 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 4.8E-46 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AL538_04530 0f1c7cd50ee676eb57b5901d469f8fb2 111 Pfam PF00462 Glutaredoxin 16 80 4.8E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_04530 0f1c7cd50ee676eb57b5901d469f8fb2 111 Gene3D G3DSA:3.40.30.10 2 106 9.6E-31 T 11-10-2018 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 Gene3D G3DSA:2.70.98.60 1 273 2.6E-53 T 11-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 11-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PIRSF PIRSF005536 1 700 8.0E-227 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 7.1E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 Gene3D G3DSA:3.20.20.70 274 589 2.6E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 SUPERFAMILY SSF51445 289 611 7.06E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 Pfam PF02065 Melibiase 253 591 1.5E-120 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_16220 fc4f4f4ca72398963c95e887a01db78a 700 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 22 244 2.7E-47 T 11-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 Pfam PF01238 Phosphomannose isomerase type I 5 362 2.2E-90 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 Gene3D G3DSA:1.10.441.10 151 308 4.0E-134 T 11-10-2018 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 SUPERFAMILY SSF51182 4 381 1.51E-102 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 389 6.9E-97 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 Gene3D G3DSA:2.60.120.10 309 390 4.0E-134 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PIRSF PIRSF001480 2 397 4.9E-103 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 263 288 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 Gene3D G3DSA:2.60.120.10 10 283 4.0E-134 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_26385 806d53d38d98a7d13471d779b7ee8e89 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 2.6E-66 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.1E-5 T 11-10-2018 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.1E-5 T 11-10-2018 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.1E-5 T 11-10-2018 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Gene3D G3DSA:1.10.275.10 6 133 5.5E-49 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Pfam PF10415 Fumarase C C-terminus 403 455 8.3E-19 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Gene3D G3DSA:1.20.200.10 134 400 2.5E-95 T 11-10-2018 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.757 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Pfam PF00206 Lyase 13 337 2.5E-91 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 Gene3D G3DSA:1.10.40.30 403 454 1.7E-18 T 11-10-2018 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.2E-31 T 11-10-2018 IPR000362 Fumarate lyase family AL538_08440 e32e0dfa65cd881002fb836b2ad75259 461 SUPERFAMILY SSF48557 5 455 1.19E-135 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_26275 bf8f6c228fecfc58080b6eef58be8f19 396 SUPERFAMILY SSF103473 4 381 1.2E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_26275 bf8f6c228fecfc58080b6eef58be8f19 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 378 1.6E-61 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL538_26275 bf8f6c228fecfc58080b6eef58be8f19 396 Gene3D G3DSA:1.20.1720.10 6 380 8.8E-85 T 11-10-2018 AL538_26275 bf8f6c228fecfc58080b6eef58be8f19 396 Pfam PF07690 Major Facilitator Superfamily 17 349 1.8E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_10595 cf32490a2b06fe66e80f6538553f78fd 141 Gene3D G3DSA:2.60.120.10 1 138 4.1E-51 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_10595 cf32490a2b06fe66e80f6538553f78fd 141 SUPERFAMILY SSF51182 3 131 1.18E-42 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_10595 cf32490a2b06fe66e80f6538553f78fd 141 Pfam PF05523 WxcM-like, C-terminal 3 130 7.8E-51 T 11-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 AL538_17015 317687cfc8cddbc43226cd97da602e81 239 SMART SM00895 92 219 1.7E-23 T 11-10-2018 IPR011711 GntR, C-terminal AL538_17015 317687cfc8cddbc43226cd97da602e81 239 SUPERFAMILY SSF48008 88 223 6.54E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_17015 317687cfc8cddbc43226cd97da602e81 239 SMART SM00345 24 82 5.5E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_17015 317687cfc8cddbc43226cd97da602e81 239 SUPERFAMILY SSF46785 18 110 3.64E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17015 317687cfc8cddbc43226cd97da602e81 239 Pfam PF07729 FCD domain 92 217 8.5E-26 T 11-10-2018 IPR011711 GntR, C-terminal AL538_17015 317687cfc8cddbc43226cd97da602e81 239 Gene3D G3DSA:1.20.120.530 80 230 1.7E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_17015 317687cfc8cddbc43226cd97da602e81 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 3.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_17015 317687cfc8cddbc43226cd97da602e81 239 Gene3D G3DSA:1.10.10.10 3 79 2.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 Gene3D G3DSA:3.40.190.290 94 296 9.1E-35 T 11-10-2018 AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 Pfam PF03466 LysR substrate binding domain 90 294 2.0E-46 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 SUPERFAMILY SSF46785 5 113 9.28E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 Gene3D G3DSA:1.10.10.10 4 91 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 SUPERFAMILY SSF53850 92 296 3.67E-41 T 11-10-2018 AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_05795 f88218b142826e78106fc60d7ff2db5d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_06885 b92fd4c513f20b78a9f52e776a467587 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 189 2.4E-43 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL538_06885 b92fd4c513f20b78a9f52e776a467587 197 PIRSF PIRSF006806 3 192 4.5E-36 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL538_06885 b92fd4c513f20b78a9f52e776a467587 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 1.5E-51 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL538_06885 b92fd4c513f20b78a9f52e776a467587 197 SUPERFAMILY SSF100950 5 195 4.33E-57 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AL538_06885 b92fd4c513f20b78a9f52e776a467587 197 Gene3D G3DSA:3.40.50.10420 2 196 6.5E-56 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AL538_24225 4680e4a8c5b4e5450294364057f22294 311 Gene3D G3DSA:2.40.100.10 182 309 2.4E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_24225 4680e4a8c5b4e5450294364057f22294 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 290 4.1E-83 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL538_24225 4680e4a8c5b4e5450294364057f22294 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 291 1.7E-80 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL538_24225 4680e4a8c5b4e5450294364057f22294 311 SMART SM00797 27 308 1.1E-134 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AL538_24225 4680e4a8c5b4e5450294364057f22294 311 SUPERFAMILY SSF50891 184 295 3.3E-9 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 Gene3D G3DSA:3.20.70.20 121 687 3.2E-231 T 11-10-2018 AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 6.9E-198 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 Pfam PF03477 ATP cone domain 4 89 2.5E-22 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.1E-179 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AL538_24435 4f8b75edef28a7f2d404750c59bec60c 706 SUPERFAMILY SSF51998 121 687 3.97E-191 T 11-10-2018 AL538_04180 85ac581f99255745296c55dd09cce326 138 Gene3D G3DSA:3.10.180.10 3 135 6.7E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_04180 85ac581f99255745296c55dd09cce326 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 3.6E-24 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_04180 85ac581f99255745296c55dd09cce326 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL538_04180 85ac581f99255745296c55dd09cce326 138 SUPERFAMILY SSF54593 3 130 2.01E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_04180 85ac581f99255745296c55dd09cce326 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 6.0E-69 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL538_02485 3845520a5c29ff6b55ec1a46c34fe8fd 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.6E-5 T 11-10-2018 AL538_02485 3845520a5c29ff6b55ec1a46c34fe8fd 82 SUPERFAMILY SSF143120 12 68 2.35E-8 T 11-10-2018 IPR036165 YefM-like superfamily AL538_02485 3845520a5c29ff6b55ec1a46c34fe8fd 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 76 1.2E-8 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL538_00720 7c72f09345ab18d0737bc5bd0a738dd1 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 136 273 4.7E-18 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AL538_00720 7c72f09345ab18d0737bc5bd0a738dd1 278 Gene3D G3DSA:1.10.530.10 131 275 1.7E-14 T 11-10-2018 AL538_19210 514e477da6e772873dd282e5466659b9 302 Pfam PF01774 UreD urease accessory protein 74 274 3.8E-42 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AL538_19210 514e477da6e772873dd282e5466659b9 302 Hamap MF_01384 Urease accessory protein UreD [ureD]. 27 286 26.055 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AL538_17870 e5ce4bcaa1c2d5db999c2d2113c67747 557 Pfam PF16130 Domain of unknown function (DUF4842) 325 544 8.5E-52 T 11-10-2018 IPR032295 Domain of unknown function DUF4842 AL538_17870 e5ce4bcaa1c2d5db999c2d2113c67747 557 Pfam PF13448 Domain of unknown function (DUF4114) 162 247 4.1E-22 T 11-10-2018 IPR025193 Domain of unknown function DUF4114 AL538_17870 e5ce4bcaa1c2d5db999c2d2113c67747 557 TIGRFAM TIGR04456 LruC_dom: LruC domain 290 545 4.2E-81 T 11-10-2018 IPR031025 LruC domain AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 21.958 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 Gene3D G3DSA:3.30.1390.20 1 58 6.2E-28 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 PIRSF PIRSF002211 1 58 2.1E-28 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 SUPERFAMILY SSF55129 1 58 3.01E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 5.3E-21 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL538_10915 ee11f25d28c9b0b76c53ebf6ccc3dfee 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.2E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 Gene3D G3DSA:2.30.130.10 22 93 6.8E-29 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 Gene3D G3DSA:3.30.750.80 94 201 8.4E-35 T 11-10-2018 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 Gene3D G3DSA:3.40.50.150 202 417 2.8E-69 T 11-10-2018 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 SMART SM00359 24 107 8.2E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 SUPERFAMILY SSF53335 99 414 3.11E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 22 418 68.274 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 SUPERFAMILY SSF88697 25 94 3.41E-17 T 11-10-2018 IPR015947 PUA-like superfamily AL538_00990 8d3feabe2be8b819c64b56f213e89678 418 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 190 397 1.9E-30 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AL538_17455 b5d15596da0c75027154d405e6433188 786 Pfam PF13654 AAA domain 25 539 1.0E-183 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 Gene3D G3DSA:3.30.230.10 540 769 1.8E-91 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_17455 b5d15596da0c75027154d405e6433188 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.7E-6 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.7E-6 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.7E-6 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 751 6.6E-9 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AL538_17455 b5d15596da0c75027154d405e6433188 786 SUPERFAMILY SSF52540 30 538 9.63E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_17455 b5d15596da0c75027154d405e6433188 786 Gene3D G3DSA:3.40.50.300 242 449 7.0E-56 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 Gene3D G3DSA:3.40.50.300 5 176 2.8E-27 T 11-10-2018 AL538_17455 b5d15596da0c75027154d405e6433188 786 SUPERFAMILY SSF54211 564 756 9.86E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_17455 b5d15596da0c75027154d405e6433188 786 Gene3D G3DSA:1.10.8.60 450 536 5.4E-12 T 11-10-2018 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10820 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_13855 619fc70f4c28c0790f40225e062c6d75 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 164 6.6E-46 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL538_13855 619fc70f4c28c0790f40225e062c6d75 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 8.8E-37 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL538_13855 619fc70f4c28c0790f40225e062c6d75 185 PIRSF PIRSF004982 2 185 9.3E-63 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AL538_17170 2beddce9aa095353fbc72018700fcabb 278 SUPERFAMILY SSF161098 20 266 4.19E-28 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17170 2beddce9aa095353fbc72018700fcabb 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 274 3.6E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17170 2beddce9aa095353fbc72018700fcabb 278 Gene3D G3DSA:1.10.3720.10 58 272 1.1E-22 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17170 2beddce9aa095353fbc72018700fcabb 278 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 10 269 2.8E-77 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 Gene3D G3DSA:3.40.50.300 506 677 2.9E-10 T 11-10-2018 AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 283 673 6.0E-59 T 11-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 SMART SM00487 260 501 0.0013 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 Pfam PF00271 Helicase conserved C-terminal domain 547 668 6.7E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 Pfam PF04851 Type III restriction enzyme, res subunit 228 443 1.6E-5 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 Gene3D G3DSA:1.10.3210.30 1 258 5.6E-52 T 11-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 SUPERFAMILY SSF52540 279 674 9.85E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 SMART SM00490 570 669 8.9E-5 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_00310 4d87882ef92abbec74bb276d3744f0a5 899 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 21 211 4.4E-25 T 11-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain AL538_14295 a9434b165396f5338feb718ec30576e6 194 Pfam PF13023 HD domain 11 158 1.8E-16 T 11-10-2018 IPR006674 HD domain AL538_14295 a9434b165396f5338feb718ec30576e6 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.713 T 11-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 AL538_14295 a9434b165396f5338feb718ec30576e6 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 7.0E-47 T 11-10-2018 AL538_14295 a9434b165396f5338feb718ec30576e6 194 Gene3D G3DSA:1.10.3210.10 1 194 4.1E-84 T 11-10-2018 AL538_14295 a9434b165396f5338feb718ec30576e6 194 SUPERFAMILY SSF109604 4 184 8.57E-44 T 11-10-2018 AL538_14295 a9434b165396f5338feb718ec30576e6 194 SMART SM00471 26 151 6.6E-8 T 11-10-2018 IPR003607 HD/PDEase domain AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.731 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Gene3D G3DSA:3.40.120.10 258 340 3.5E-60 T 11-10-2018 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 SUPERFAMILY SSF53738 157 257 9.03E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 SUPERFAMILY SSF55957 358 444 6.41E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.6E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.6E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 1.6E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Gene3D G3DSA:3.30.310.50 371 446 1.8E-24 T 11-10-2018 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 2.8E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 2.2E-45 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.5E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 SUPERFAMILY SSF53738 259 365 2.47E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 4.2E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 SUPERFAMILY SSF53738 4 182 1.29E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 8.3E-202 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Gene3D G3DSA:3.40.120.10 176 363 3.5E-60 T 11-10-2018 AL538_06205 63d30abee01bbc139afccad1efde23f9 446 Gene3D G3DSA:3.40.120.10 4 155 6.8E-49 T 11-10-2018 AL538_27290 de3376e21fe78e81d799c1d62eefe6a4 918 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 156 228 1.3E-18 T 11-10-2018 IPR013491 Caudovirus, tape measure, N-terminal AL538_06150 e481710b68da385b1d78f11b9d15f869 307 Gene3D G3DSA:1.25.40.10 26 299 6.4E-80 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_06150 e481710b68da385b1d78f11b9d15f869 307 PIRSF PIRSF004654 1 296 2.1E-90 T 11-10-2018 IPR023605 Lipoprotein NlpI AL538_06150 e481710b68da385b1d78f11b9d15f869 307 SUPERFAMILY SSF48452 34 286 3.52E-68 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_06150 e481710b68da385b1d78f11b9d15f869 307 SMART SM00028 238 271 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_06150 e481710b68da385b1d78f11b9d15f869 307 SMART SM00028 100 133 0.0072 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_06150 e481710b68da385b1d78f11b9d15f869 307 SMART SM00028 66 99 0.057 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_06150 e481710b68da385b1d78f11b9d15f869 307 SMART SM00028 134 167 280.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_24900 7d992b4488c82b1d974b1b6de34f60ea 175 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 162 2.2E-60 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_24900 7d992b4488c82b1d974b1b6de34f60ea 175 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 6.1E-62 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_24900 7d992b4488c82b1d974b1b6de34f60ea 175 PIRSF PIRSF028301 1 173 2.2E-66 T 11-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 SUPERFAMILY SSF53850 90 285 2.17E-37 T 11-10-2018 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 SUPERFAMILY SSF46785 3 111 7.91E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 Gene3D G3DSA:1.10.10.10 3 89 4.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 Pfam PF03466 LysR substrate binding domain 90 284 2.8E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_24080 c5ac372ab3c6dbbf7e83effa8c6aff01 301 Gene3D G3DSA:3.40.190.290 92 292 1.1E-34 T 11-10-2018 AL538_23125 8a624bab65114b4724ddc09ec2a77622 582 Pfam PF13519 von Willebrand factor type A domain 106 211 1.0E-10 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_23125 8a624bab65114b4724ddc09ec2a77622 582 SUPERFAMILY SSF53300 103 276 8.34E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_23125 8a624bab65114b4724ddc09ec2a77622 582 SUPERFAMILY SSF48452 357 457 1.49E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23125 8a624bab65114b4724ddc09ec2a77622 582 Gene3D G3DSA:3.40.50.410 101 284 8.3E-23 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_23125 8a624bab65114b4724ddc09ec2a77622 582 Gene3D G3DSA:1.25.40.10 373 550 5.8E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_17655 f4a2d3d3221e3cc7938624f0548e59e5 297 SUPERFAMILY SSF103481 187 283 7.85E-17 T 11-10-2018 AL538_17655 f4a2d3d3221e3cc7938624f0548e59e5 297 SUPERFAMILY SSF103481 38 137 3.27E-16 T 11-10-2018 AL538_17655 f4a2d3d3221e3cc7938624f0548e59e5 297 Pfam PF00892 EamA-like transporter family 154 281 4.9E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_17655 f4a2d3d3221e3cc7938624f0548e59e5 297 Pfam PF00892 EamA-like transporter family 9 136 1.0E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.4E-45 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 3.2E-21 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 8.0E-36 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 3.5E-32 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 Gene3D G3DSA:3.90.470.20 1 126 3.7E-40 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 SUPERFAMILY SSF56214 3 125 1.96E-30 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AL538_06775 070de9ccc86e858afbe2abcf8a2bb5f0 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.026 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 5.3E-152 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 2.2E-77 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 SUPERFAMILY SSF102645 184 399 4.05E-81 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 Gene3D G3DSA:3.40.50.10300 186 400 5.9E-84 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 Gene3D G3DSA:3.40.50.1950 1 185 5.9E-55 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 Pfam PF02441 Flavoprotein 7 179 9.8E-44 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL538_10510 3ea350eadaaeaf4f42ca9180b0985fc1 400 SUPERFAMILY SSF52507 1 181 7.72E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL538_15180 615138c6360cfa66236ee53f735f1415 963 Pfam PF03496 ADP-ribosyltransferase exoenzyme 778 850 5.6E-8 T 11-10-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 AL538_15180 615138c6360cfa66236ee53f735f1415 963 SUPERFAMILY SSF56399 638 856 1.25E-17 T 11-10-2018 AL538_15180 615138c6360cfa66236ee53f735f1415 963 Gene3D G3DSA:3.90.176.10 712 856 1.3E-20 T 11-10-2018 AL538_01085 b775898d03929169922724f0de42d6d3 187 SUPERFAMILY SSF103088 79 186 2.75E-21 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_01085 b775898d03929169922724f0de42d6d3 187 Pfam PF00691 OmpA family 88 179 4.0E-18 T 11-10-2018 IPR006665 OmpA-like domain AL538_01085 b775898d03929169922724f0de42d6d3 187 Gene3D G3DSA:3.30.1330.60 57 185 3.5E-22 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.2E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.095 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-23 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 Gene3D G3DSA:3.30.1320.10 1 82 2.7E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06555 99a73aec9d3a5370a2ca8efb3a875904 82 SUPERFAMILY SSF54565 1 76 6.93E-28 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_16140 7670fe65c49ebbf10dc95357c5d299ae 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.4E-18 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 SUPERFAMILY SSF53822 60 334 2.16E-89 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 SMART SM00354 1 71 2.4E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.2E-40 T 11-10-2018 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 11-10-2018 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 Gene3D G3DSA:3.40.50.2300 56 306 8.9E-80 T 11-10-2018 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 Gene3D G3DSA:3.40.50.2300 160 289 8.9E-80 T 11-10-2018 AL538_10805 2602d6c9f96c81b89a748da445dcce66 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 SMART SM00930 265 340 1.5E-28 T 11-10-2018 IPR018449 NIL domain AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 Gene3D G3DSA:3.30.70.260 244 344 1.5E-40 T 11-10-2018 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 Gene3D G3DSA:3.40.50.300 1 232 1.7E-74 T 11-10-2018 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 Pfam PF09383 NIL domain 268 339 4.6E-21 T 11-10-2018 IPR018449 NIL domain AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 SUPERFAMILY SSF52540 1 238 5.32E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 SMART SM00382 30 235 2.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 Pfam PF00005 ABC transporter 21 169 9.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.8E-195 T 11-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 AL538_12995 07d5ee4b73af81eac11b8c28c8fb46ea 344 SUPERFAMILY SSF55021 248 343 3.2E-26 T 11-10-2018 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.40.50.790 68 159 1.6E-80 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.5E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.048 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 SUPERFAMILY SSF56808 6 225 2.49E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 PIRSF PIRSF002155 1 227 3.8E-79 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 Gene3D G3DSA:3.30.190.20 21 225 1.6E-80 T 11-10-2018 AL538_08670 8c1ba8b3c18658d94a334f71b82c4fab 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.7E-52 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL538_00840 a6dddde0ff09ce8fc006b9579d40911c 590 Pfam PF11949 Protein of unknown function (DUF3466) 260 590 1.8E-50 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 AL538_00840 a6dddde0ff09ce8fc006b9579d40911c 590 Pfam PF11949 Protein of unknown function (DUF3466) 5 201 1.2E-7 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 AL538_00840 a6dddde0ff09ce8fc006b9579d40911c 590 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 571 590 0.001 T 11-10-2018 IPR020008 GlyGly-CTERM domain AL538_20370 e25c167839eb1967854a5e8c39406c93 420 Gene3D G3DSA:1.10.150.130 110 220 2.3E-17 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_20370 e25c167839eb1967854a5e8c39406c93 420 SUPERFAMILY SSF56349 117 407 1.91E-42 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_20370 e25c167839eb1967854a5e8c39406c93 420 Pfam PF00589 Phage integrase family 241 401 2.4E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_20370 e25c167839eb1967854a5e8c39406c93 420 Gene3D G3DSA:1.10.443.10 225 415 8.8E-26 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_20370 e25c167839eb1967854a5e8c39406c93 420 Pfam PF13102 Phage integrase SAM-like domain 122 208 6.7E-5 T 11-10-2018 IPR025269 Phage integrase SAM-like domain AL538_27700 c20e0432bd4eef50a75bde86802a303f 49 Pfam PF11665 Protein of unknown function (DUF3265) 22 49 5.9E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_16230 1ca693ef96e93c7fbef2fdf829fecbae 486 Pfam PF11066 Protein of unknown function (DUF2867) 333 465 1.9E-12 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 AL538_16230 1ca693ef96e93c7fbef2fdf829fecbae 486 Pfam PF13460 NAD(P)H-binding 8 149 1.8E-14 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_16230 1ca693ef96e93c7fbef2fdf829fecbae 486 SUPERFAMILY SSF51735 1 294 1.01E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_16230 1ca693ef96e93c7fbef2fdf829fecbae 486 Gene3D G3DSA:3.40.50.720 2 281 3.8E-34 T 11-10-2018 AL538_18645 0348accefcb9b36f9d8692819570cf3b 377 SUPERFAMILY SSF56281 95 351 7.73E-33 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_18645 0348accefcb9b36f9d8692819570cf3b 377 Pfam PF12706 Beta-lactamase superfamily domain 113 314 3.6E-42 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_18645 0348accefcb9b36f9d8692819570cf3b 377 Gene3D G3DSA:3.60.15.10 78 375 5.6E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.901 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 Gene3D G3DSA:3.40.50.300 20 202 6.4E-52 T 11-10-2018 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 1.2E-110 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 SUPERFAMILY SSF52540 29 224 2.86E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 Gene3D G3DSA:3.30.300.20 204 318 1.7E-42 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 SUPERFAMILY SSF54814 200 316 2.75E-41 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AL538_06790 d8437e73b9a6310fed7649ef57f9184f 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 187 6.4E-39 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AL538_21565 1bcaadbf2c717fbd8c465dfb015c20b1 372 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 12 225 1.6E-55 T 11-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 AL538_21565 1bcaadbf2c717fbd8c465dfb015c20b1 372 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 4 202 1.6E-65 T 11-10-2018 IPR013413 CRISPR-associated protein, NE0113 AL538_09450 9cb6916a96aa9832f88f71d97140dfd4 364 SMART SM00257 39 87 2.0E-4 T 11-10-2018 IPR018392 LysM domain AL538_09450 9cb6916a96aa9832f88f71d97140dfd4 364 Gene3D G3DSA:3.10.350.10 38 85 1.7E-14 T 11-10-2018 IPR036779 LysM domain superfamily AL538_09450 9cb6916a96aa9832f88f71d97140dfd4 364 Pfam PF01476 LysM domain 40 85 1.2E-12 T 11-10-2018 IPR018392 LysM domain AL538_09450 9cb6916a96aa9832f88f71d97140dfd4 364 SUPERFAMILY SSF54106 38 86 8.76E-7 T 11-10-2018 AL538_28465 c64b4c12723aa9fbb83fe6f8122cc5d4 35 Pfam PF08173 Membrane bound YbgT-like protein 1 26 6.5E-14 T 11-10-2018 IPR012994 Membrane bound YbgT-like AL538_28465 c64b4c12723aa9fbb83fe6f8122cc5d4 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 1.1E-15 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL538_15495 2374434c859037e016c6bb9a133edc8e 419 SUPERFAMILY SSF48230 78 363 1.83E-55 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_15495 2374434c859037e016c6bb9a133edc8e 419 Pfam PF05426 Alginate lyase 72 355 2.9E-82 T 11-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AL538_15495 2374434c859037e016c6bb9a133edc8e 419 Gene3D G3DSA:1.50.10.100 28 406 7.7E-120 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_02175 3b83c7d0dd8735e557e144aa9ce80cd4 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 1.0E-17 T 11-10-2018 AL538_02175 3b83c7d0dd8735e557e144aa9ce80cd4 153 Gene3D G3DSA:1.20.120.1630 3 153 6.3E-24 T 11-10-2018 AL538_02175 3b83c7d0dd8735e557e144aa9ce80cd4 153 Pfam PF04191 Phospholipid methyltransferase 41 142 3.3E-13 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AL538_23750 f98ca89947348e009a5d91882019b193 150 SUPERFAMILY SSF55811 10 137 1.21E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_23750 f98ca89947348e009a5d91882019b193 150 Gene3D G3DSA:3.90.79.10 6 136 4.2E-25 T 11-10-2018 AL538_23750 f98ca89947348e009a5d91882019b193 150 Pfam PF00293 NUDIX domain 12 120 7.0E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_16570 4f5567163ce3fdbf993a746fadeef102 254 SUPERFAMILY SSF52540 2 233 2.95E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_16570 4f5567163ce3fdbf993a746fadeef102 254 Gene3D G3DSA:3.40.50.300 1 251 7.1E-62 T 11-10-2018 AL538_16570 4f5567163ce3fdbf993a746fadeef102 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_16570 4f5567163ce3fdbf993a746fadeef102 254 Pfam PF00005 ABC transporter 17 165 4.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_16570 4f5567163ce3fdbf993a746fadeef102 254 SMART SM00382 26 214 7.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_21930 ed57568859a18825ab6904f4347b4551 382 Pfam PF00155 Aminotransferase class I and II 26 375 1.2E-32 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_21930 ed57568859a18825ab6904f4347b4551 382 SUPERFAMILY SSF53383 3 381 3.2E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_21930 ed57568859a18825ab6904f4347b4551 382 Gene3D G3DSA:3.40.640.10 60 273 5.6E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_21930 ed57568859a18825ab6904f4347b4551 382 Gene3D G3DSA:3.90.1150.10 15 378 5.6E-111 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_15685 2675a7ef10e516397e03b854a9b03b76 88 SUPERFAMILY SSF57716 38 71 5.84E-7 T 11-10-2018 AL538_15685 2675a7ef10e516397e03b854a9b03b76 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 4.1E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL538_15685 2675a7ef10e516397e03b854a9b03b76 88 Gene3D G3DSA:1.20.120.910 1 73 1.3E-23 T 11-10-2018 AL538_08385 e56b9136fa0406171630091d589140af 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 5.0E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_08385 e56b9136fa0406171630091d589140af 159 SUPERFAMILY SSF75217 2 157 2.09E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_08385 e56b9136fa0406171630091d589140af 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 2.2E-59 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL538_08385 e56b9136fa0406171630091d589140af 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.924 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL538_08385 e56b9136fa0406171630091d589140af 159 PIRSF PIRSF029256 1 159 2.7E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AL538_08385 e56b9136fa0406171630091d589140af 159 Gene3D G3DSA:3.40.1280.10 1 159 3.1E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_25895 750169f1f47acbda049c124499872c81 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.427 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL538_25895 750169f1f47acbda049c124499872c81 486 Gene3D G3DSA:3.40.605.10 18 474 5.3E-179 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_25895 750169f1f47acbda049c124499872c81 486 SUPERFAMILY SSF53720 5 480 2.09E-170 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_25895 750169f1f47acbda049c124499872c81 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 3.5E-202 T 11-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AL538_25895 750169f1f47acbda049c124499872c81 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 1.5E-175 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_25895 750169f1f47acbda049c124499872c81 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL538_25895 750169f1f47acbda049c124499872c81 486 Gene3D G3DSA:3.40.309.10 253 446 5.3E-179 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_18890 4daaac457d9c3ace5950b419208480a9 476 Pfam PF03600 Citrate transporter 45 420 9.3E-53 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AL538_18890 4daaac457d9c3ace5950b419208480a9 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 464 1.6E-181 T 11-10-2018 IPR004672 Na+/H+ antiporter NhaD AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Gene3D G3DSA:3.30.1060.10 26 210 2.4E-61 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Pfam PF01641 SelR domain 243 362 9.6E-46 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 42 192 3.4E-49 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 6.6E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 5.1E-58 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 SUPERFAMILY SSF55068 32 205 1.83E-69 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.116 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 SUPERFAMILY SSF51316 239 379 7.85E-59 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Gene3D G3DSA:2.170.150.20 233 380 2.1E-55 T 11-10-2018 AL538_20760 21bab2bde1f4f06bcf9ed8c4d0ab0b7a 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.328 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AL538_10520 8541e2a1a99d578b66ba44125cc718dc 224 SUPERFAMILY SSF47781 17 91 1.46E-10 T 11-10-2018 IPR010994 RuvA domain 2-like AL538_10520 8541e2a1a99d578b66ba44125cc718dc 224 Gene3D G3DSA:3.40.140.10 101 224 3.5E-43 T 11-10-2018 AL538_10520 8541e2a1a99d578b66ba44125cc718dc 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.9E-78 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AL538_10520 8541e2a1a99d578b66ba44125cc718dc 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AL538_10520 8541e2a1a99d578b66ba44125cc718dc 224 Pfam PF04002 RadC-like JAB domain 104 222 1.1E-44 T 11-10-2018 IPR025657 RadC-like JAB domain AL538_10440 7db772c82b31dfd4c72f2d774ab05455 347 Gene3D G3DSA:1.10.3720.10 133 338 5.9E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL538_10440 7db772c82b31dfd4c72f2d774ab05455 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 6.0E-28 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_10440 7db772c82b31dfd4c72f2d774ab05455 347 SUPERFAMILY SSF161098 139 325 3.66E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL538_22415 e9fbcaccbf4826fdec0c550ac1a2b457 245 SUPERFAMILY SSF47413 6 68 7.51E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_22415 e9fbcaccbf4826fdec0c550ac1a2b457 245 Gene3D G3DSA:1.10.260.40 2 69 5.9E-6 T 11-10-2018 AL538_22415 e9fbcaccbf4826fdec0c550ac1a2b457 245 SMART SM00530 10 65 1.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_22415 e9fbcaccbf4826fdec0c550ac1a2b457 245 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 69 3.7E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_14105 b3ca9d122b40d0f3758fe5d0aa44e825 258 SUPERFAMILY SSF69593 71 253 4.32E-23 T 11-10-2018 AL538_14105 b3ca9d122b40d0f3758fe5d0aa44e825 258 SMART SM00563 90 200 9.1E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_14105 b3ca9d122b40d0f3758fe5d0aa44e825 258 Pfam PF01553 Acyltransferase 80 193 1.8E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_11735 10dbe78de1785726082cff23cd532091 231 Gene3D G3DSA:3.40.50.1580 1 231 1.3E-71 T 11-10-2018 AL538_11735 10dbe78de1785726082cff23cd532091 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.95 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_11735 10dbe78de1785726082cff23cd532091 231 Pfam PF01048 Phosphorylase superfamily 2 227 2.1E-48 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_11735 10dbe78de1785726082cff23cd532091 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 2.3E-101 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AL538_11735 10dbe78de1785726082cff23cd532091 231 SUPERFAMILY SSF53167 1 228 1.02E-73 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_25015 35de253299c60e8584c39430630942c6 428 Gene3D G3DSA:2.40.160.60 24 428 1.1E-135 T 11-10-2018 AL538_25015 35de253299c60e8584c39430630942c6 428 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 428 1.4E-120 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_25015 35de253299c60e8584c39430630942c6 428 SUPERFAMILY SSF56935 24 428 2.15E-98 T 11-10-2018 AL538_04710 f038921aee909711f5787efe7e397c13 128 Gene3D G3DSA:3.10.180.10 1 126 7.3E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_04710 f038921aee909711f5787efe7e397c13 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 120 1.1E-17 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_04710 f038921aee909711f5787efe7e397c13 128 SUPERFAMILY SSF54593 1 124 2.15E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 SUPERFAMILY SSF55298 293 419 4.56E-26 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 SUPERFAMILY SSF55298 7 136 1.4E-31 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Gene3D G3DSA:3.30.1330.40 4 134 5.2E-34 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Gene3D G3DSA:3.30.1330.40 290 417 2.7E-25 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Pfam PF01042 Endoribonuclease L-PSP 299 411 6.2E-19 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Pfam PF01042 Endoribonuclease L-PSP 32 128 4.2E-24 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Pfam PF01042 Endoribonuclease L-PSP 159 272 1.0E-20 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 Gene3D G3DSA:3.30.1330.40 140 277 7.6E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_19725 7402077a9a9162f71b49d30d0960eab8 425 SUPERFAMILY SSF55298 144 280 2.98E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_11865 99b43efe9cda739cc21bda0d4b0d22ae 211 SUPERFAMILY SSF47240 65 201 2.78E-5 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_11865 99b43efe9cda739cc21bda0d4b0d22ae 211 PIRSF PIRSF005229 1 210 1.2E-96 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 AL538_11865 99b43efe9cda739cc21bda0d4b0d22ae 211 Gene3D G3DSA:1.20.1260.140 1 209 1.6E-84 T 11-10-2018 IPR038659 Alternative oxidase superfamily AL538_11865 99b43efe9cda739cc21bda0d4b0d22ae 211 Pfam PF01786 Alternative oxidase 3 199 7.8E-77 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 AL538_03675 3e2f512b99fc6524bce4cbce749e53e5 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 422 3.5E-106 T 11-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AL538_03675 3e2f512b99fc6524bce4cbce749e53e5 443 Pfam PF04403 Paraquat-inducible protein A 49 208 3.1E-38 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL538_03675 3e2f512b99fc6524bce4cbce749e53e5 443 Pfam PF04403 Paraquat-inducible protein A 265 422 7.7E-54 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like AL538_03675 3e2f512b99fc6524bce4cbce749e53e5 443 SUPERFAMILY SSF48695 223 270 3.33E-5 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_13445 05604137ad6305884b9ffbddb58f22c6 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 9.5E-22 T 11-10-2018 IPR005648 Flagellar hook capping protein AL538_13445 05604137ad6305884b9ffbddb58f22c6 235 Gene3D G3DSA:2.30.30.910 94 222 3.5E-36 T 11-10-2018 AL538_13445 05604137ad6305884b9ffbddb58f22c6 235 Gene3D G3DSA:2.60.40.4070 110 196 3.5E-36 T 11-10-2018 AL538_13445 05604137ad6305884b9ffbddb58f22c6 235 Pfam PF13860 FlgD Ig-like domain 120 184 2.6E-19 T 11-10-2018 IPR025965 FlgD Ig-like domain AL538_13445 05604137ad6305884b9ffbddb58f22c6 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.1E-15 T 11-10-2018 IPR025963 FlgD Tudor-like domain AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 Gene3D G3DSA:1.20.1300.10 5 130 1.2E-43 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 PIRSF PIRSF000178 2 130 1.4E-31 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 SUPERFAMILY SSF81343 8 130 2.45E-34 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 3.2E-39 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_13740 5ea37486e84e6383ea5ff7a738b0e6f1 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 3.3E-28 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AL538_00380 d1a5dc5cb57fde01475d752688a96bb3 361 Pfam PF04888 Secretion system effector C (SseC) like family 65 342 2.1E-8 T 11-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 Pfam PF00571 CBS domain 95 140 1.7E-9 T 11-10-2018 IPR000644 CBS domain AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 Pfam PF00571 CBS domain 149 201 9.9E-4 T 11-10-2018 IPR000644 CBS domain AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 PIRSF PIRSF000130 1 487 1.9E-201 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 SMART SM00116 158 206 1.1E-5 T 11-10-2018 IPR000644 CBS domain AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 SMART SM00116 96 144 6.0E-12 T 11-10-2018 IPR000644 CBS domain AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 Gene3D G3DSA:3.20.20.70 1 486 3.1E-211 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 SMART SM01240 7 473 0.0 T 11-10-2018 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 6.3E-197 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 SUPERFAMILY SSF54631 95 203 5.31E-26 T 11-10-2018 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.859 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 SUPERFAMILY SSF51412 1 477 9.81E-126 T 11-10-2018 AL538_12445 fbfb3f725cb1856e7f3699fe49da6c89 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 9.2E-162 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AL538_06020 f4c447dfd7d5193b81c25f94ebd8484d 568 Gene3D G3DSA:3.40.50.12780 20 441 1.3E-85 T 11-10-2018 AL538_06020 f4c447dfd7d5193b81c25f94ebd8484d 568 SUPERFAMILY SSF56801 19 552 1.44E-111 T 11-10-2018 AL538_06020 f4c447dfd7d5193b81c25f94ebd8484d 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_06020 f4c447dfd7d5193b81c25f94ebd8484d 568 Pfam PF00501 AMP-binding enzyme 29 445 8.6E-89 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_22945 2606ce999381955f259148f5e2bf282a 195 Gene3D G3DSA:3.40.50.150 2 182 8.1E-28 T 11-10-2018 AL538_22945 2606ce999381955f259148f5e2bf282a 195 Pfam PF08242 Methyltransferase domain 45 140 1.1E-14 T 11-10-2018 IPR013217 Methyltransferase type 12 AL538_22945 2606ce999381955f259148f5e2bf282a 195 SUPERFAMILY SSF53335 9 194 1.53E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_05905 7a83dc6575f6b72590bf984d1a0abedd 630 SUPERFAMILY SSF51445 220 530 1.86E-28 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_05905 7a83dc6575f6b72590bf984d1a0abedd 630 Gene3D G3DSA:3.20.20.70 210 429 2.3E-8 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 PIRSF PIRSF002096 1 135 5.2E-55 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 SUPERFAMILY SSF81273 93 135 5.89E-12 T 11-10-2018 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 Pfam PF00816 H-NS histone family 33 129 1.0E-19 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 Gene3D G3DSA:1.10.287.1050 1 93 1.4E-29 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 Gene3D G3DSA:4.10.430.10 94 135 3.4E-25 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 SUPERFAMILY SSF81273 2 58 1.79E-16 T 11-10-2018 AL538_15785 1f6afd43d12eded9703e5c90c548fd1e 135 SMART SM00528 88 135 2.0E-24 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AL538_06375 e0f7947e1bf13749e21690133831ce22 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.2E-41 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL538_06375 e0f7947e1bf13749e21690133831ce22 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.309 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL538_06375 e0f7947e1bf13749e21690133831ce22 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 2.0E-58 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL538_06375 e0f7947e1bf13749e21690133831ce22 122 PIRSF PIRSF006287 1 122 9.9E-48 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.26 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Pfam PF07840 FadR C-terminal domain 72 274 1.1E-69 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 6.4E-115 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 SMART SM00345 12 71 1.6E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Gene3D G3DSA:1.20.120.530 80 150 3.9E-7 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Gene3D G3DSA:1.20.120.530 151 279 3.4E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_03985 2c8e9b6b564f73c044f16868a7f0d376 279 SUPERFAMILY SSF48008 79 270 2.88E-56 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_10665 def721a1643a858a8f5c5cb5526db397 170 Gene3D G3DSA:2.40.160.20 22 170 1.3E-15 T 11-10-2018 AL538_10665 def721a1643a858a8f5c5cb5526db397 170 SUPERFAMILY SSF56925 25 170 2.56E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_10665 def721a1643a858a8f5c5cb5526db397 170 Pfam PF13505 Outer membrane protein beta-barrel domain 12 170 3.9E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_01670 607860ffd19cb4a3c51d18a615fa5883 154 SUPERFAMILY SSF46689 1 74 3.03E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01670 607860ffd19cb4a3c51d18a615fa5883 154 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 2.5E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_01670 607860ffd19cb4a3c51d18a615fa5883 154 Gene3D G3DSA:1.10.357.10 1 151 3.5E-44 T 11-10-2018 AL538_22295 ebc159407bcdde302672667920f05c5c 172 SUPERFAMILY SSF52499 2 163 1.57E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_22295 ebc159407bcdde302672667920f05c5c 172 Gene3D G3DSA:3.40.50.850 2 171 1.5E-43 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_22295 ebc159407bcdde302672667920f05c5c 172 Pfam PF00857 Isochorismatase family 5 169 5.3E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 485 48.709 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 SMART SM00062 43 285 8.0E-26 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 SUPERFAMILY SSF53850 44 284 9.15E-32 T 11-10-2018 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 326 354 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Gene3D G3DSA:3.40.190.10 37 280 8.6E-72 T 11-10-2018 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Gene3D G3DSA:1.10.530.10 303 483 2.3E-34 T 11-10-2018 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Pfam PF01464 Transglycosylase SLT domain 315 418 1.1E-20 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Gene3D G3DSA:3.40.190.10 128 241 8.6E-72 T 11-10-2018 AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 SUPERFAMILY SSF53955 262 467 6.75E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_12775 a0991a3081b374b87cf070f4d1fdff05 534 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 284 1.6E-28 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 SMART SM00862 156 231 9.2E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-31 T 11-10-2018 AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 SMART SM00448 5 115 2.1E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 SUPERFAMILY SSF52172 4 126 5.41E-35 T 11-10-2018 IPR011006 CheY-like superfamily AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 Gene3D G3DSA:1.10.10.10 140 235 3.5E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 Pfam PF00072 Response regulator receiver domain 7 116 4.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 SUPERFAMILY SSF46894 154 231 1.5E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_17995 65cc3a61ce508ee4774e79486d52387b 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 4.2E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_19285 eb3452369ac1c47b42bd5c5e596f5efc 257 Pfam PF14247 Putative metallopeptidase 27 249 2.0E-65 T 11-10-2018 IPR025644 Putative metallopeptidase AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 SUPERFAMILY SSF51445 1 455 2.06E-156 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.8E-14 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.8E-14 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.8E-14 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.8E-14 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.8E-14 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 2.9E-146 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 Gene3D G3DSA:3.20.20.80 1 460 7.0E-150 T 11-10-2018 AL538_20635 21828e3286dbf82448c9bff7dadd4d34 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site AL538_14840 15131159cf044a3c5a352e79bd0ec507 263 Pfam PF02698 DUF218 domain 80 242 2.8E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 Gene3D G3DSA:3.10.450.350 70 157 1.5E-9 T 11-10-2018 AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 SUPERFAMILY SSF51261 144 388 3.82E-70 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 2.5E-5 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 Pfam PF01551 Peptidase family M23 295 386 1.8E-30 T 11-10-2018 IPR016047 Peptidase M23 AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 Gene3D G3DSA:2.70.70.10 266 395 4.9E-80 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_06255 a2da105b05fc3ee989de5d1a9540123c 429 Gene3D G3DSA:3.10.450.350 172 410 4.9E-80 T 11-10-2018 AL538_18395 1ce7678029c54a3e6809cee80dbbee60 275 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 273 1.4E-70 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_18395 1ce7678029c54a3e6809cee80dbbee60 275 SUPERFAMILY SSF51569 2 274 3.96E-83 T 11-10-2018 AL538_18395 1ce7678029c54a3e6809cee80dbbee60 275 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 274 1.9E-78 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_18395 1ce7678029c54a3e6809cee80dbbee60 275 Gene3D G3DSA:3.20.20.70 1 275 4.0E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_18395 1ce7678029c54a3e6809cee80dbbee60 275 PIRSF PIRSF001359 1 275 3.8E-71 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_07375 0b52344f8ea2b85f250449124462b0d0 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.6E-33 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL538_07375 0b52344f8ea2b85f250449124462b0d0 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-38 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL538_07375 0b52344f8ea2b85f250449124462b0d0 95 SUPERFAMILY SSF69754 2 95 3.27E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL538_07375 0b52344f8ea2b85f250449124462b0d0 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 1.3E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL538_22365 c8eaa96dd4c4750210a1597388e33a15 101 SMART SM01065 12 93 0.0055 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 AL538_22365 c8eaa96dd4c4750210a1597388e33a15 101 Gene3D G3DSA:2.60.40.10 6 100 1.6E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_22365 c8eaa96dd4c4750210a1597388e33a15 101 SUPERFAMILY SSF81296 11 96 9.8E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 SMART SM01152 8 84 2.1E-39 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 1.1E-27 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 20.578 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 7.5E-26 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 Gene3D G3DSA:3.30.1200.10 1 96 8.9E-35 T 11-10-2018 IPR036591 YggU-like superfamily AL538_07015 245f102989c8beb184bf20f4aab9d9ac 96 SUPERFAMILY SSF69786 4 95 3.01E-32 T 11-10-2018 IPR036591 YggU-like superfamily AL538_23390 3797deda915c5d9cf07adf6877b93343 1129 Pfam PF06761 Intracellular multiplication and human macrophage-killing 486 755 3.6E-44 T 11-10-2018 IPR009612 ImcF-related AL538_23390 3797deda915c5d9cf07adf6877b93343 1129 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 92 1127 2.5E-173 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AL538_23390 3797deda915c5d9cf07adf6877b93343 1129 Pfam PF06744 Type VI secretion protein IcmF C-terminal 879 1078 1.2E-47 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL538_23390 3797deda915c5d9cf07adf6877b93343 1129 Pfam PF14331 ImcF-related N-terminal domain 154 408 4.3E-49 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 8.0E-170 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 SUPERFAMILY SSF103088 158 287 2.62E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 Pfam PF00691 OmpA family 187 282 1.0E-18 T 11-10-2018 IPR006665 OmpA-like domain AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 Gene3D G3DSA:2.60.40.2540 22 175 2.4E-58 T 11-10-2018 AL538_04190 73cc7918f1743789783cd4e9af4cd345 293 Gene3D G3DSA:3.30.1330.60 176 293 2.4E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_18105 32973be6865d8c3e46c2a08f466e52a1 72 Pfam PF09905 DNA-binding protein VF530 6 68 1.1E-34 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AL538_18105 32973be6865d8c3e46c2a08f466e52a1 72 Gene3D G3DSA:1.10.720.30 14 71 3.8E-30 T 11-10-2018 IPR036361 SAP domain superfamily AL538_03220 ed565380c2b2b722cdf05d21433f3cfd 207 Gene3D G3DSA:1.25.40.10 115 206 8.3E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_03220 ed565380c2b2b722cdf05d21433f3cfd 207 SUPERFAMILY SSF48452 75 190 1.72E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 11-10-2018 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10935 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_04040 0205dcc19cee7c38b17b9a5b8ba33e3a 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 35.809 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AL538_04040 0205dcc19cee7c38b17b9a5b8ba33e3a 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 5.9E-59 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 AL538_27565 8560cbf4fc09657046232f309a01c075 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.6E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_20245 50f2a6c59091746e83114a224548805b 154 Gene3D G3DSA:3.40.630.30 3 152 4.7E-33 T 11-10-2018 AL538_20245 50f2a6c59091746e83114a224548805b 154 SUPERFAMILY SSF55729 1 150 2.66E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_20245 50f2a6c59091746e83114a224548805b 154 Pfam PF00583 Acetyltransferase (GNAT) family 33 143 5.6E-15 T 11-10-2018 IPR000182 GNAT domain AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Pfam PF05922 Peptidase inhibitor I9 53 130 2.4E-10 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Gene3D G3DSA:3.30.70.80 46 129 2.6E-13 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 SUPERFAMILY SSF52743 94 395 9.56E-81 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Gene3D G3DSA:3.40.50.200 140 423 1.6E-99 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Gene3D G3DSA:2.60.120.380 431 530 1.3E-35 T 11-10-2018 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 SUPERFAMILY SSF89260 433 520 1.57E-5 T 11-10-2018 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 6.3E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 6.3E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 6.3E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Pfam PF00082 Subtilase family 167 394 6.9E-37 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AL538_01370 1c3e7f791443c97c11ca8ec4cec1748a 530 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 449 516 8.9E-15 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL538_15805 f63da904b93513cf6d287257f1599d4a 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 7.2E-169 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.815 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 8.2E-104 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 SUPERFAMILY SSF53720 4 424 7.45E-95 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 PIRSF PIRSF000099 1 427 1.3E-172 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 Gene3D G3DSA:3.40.50.1980 30 229 1.6E-128 T 11-10-2018 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 Gene3D G3DSA:3.40.50.1980 231 346 1.6E-128 T 11-10-2018 AL538_15805 f63da904b93513cf6d287257f1599d4a 430 Pfam PF00815 Histidinol dehydrogenase 26 424 1.1E-173 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 SUPERFAMILY SSF47413 18 72 8.13E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 Gene3D G3DSA:1.10.260.40 11 73 1.1E-11 T 11-10-2018 AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 SUPERFAMILY SSF52540 106 307 1.27E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 Pfam PF13401 AAA domain 104 221 3.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 Gene3D G3DSA:1.10.1180.10 235 314 7.3E-23 T 11-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 Pfam PF09077 Mu B transposition protein, C terminal 236 311 1.8E-23 T 11-10-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 AL538_27110 86c3851ba6970620a25fc6aacd18a906 314 SUPERFAMILY SSF47681 235 313 2.22E-23 T 11-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 AL538_04170 acd7fdfd233a3b86cbad0566a5d30fe2 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 2.5E-65 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_04170 acd7fdfd233a3b86cbad0566a5d30fe2 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.961 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AL538_04170 acd7fdfd233a3b86cbad0566a5d30fe2 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 4.5E-87 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 AL538_04170 acd7fdfd233a3b86cbad0566a5d30fe2 230 PIRSF PIRSF006102 1 220 7.5E-78 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.981 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 Pfam PF05239 PRC-barrel domain 103 168 4.2E-12 T 11-10-2018 IPR027275 PRC-barrel domain AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.5E-56 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 SUPERFAMILY SSF50346 106 182 2.94E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 SUPERFAMILY SSF50447 13 100 2.54E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 Gene3D G3DSA:2.40.30.60 4 100 3.4E-32 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 Gene3D G3DSA:2.30.30.240 101 182 5.7E-31 T 11-10-2018 AL538_06550 6ff3b76782f65faa7f683224e3dc85eb 182 Pfam PF01782 RimM N-terminal domain 15 95 1.8E-24 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AL538_24410 945d4ee1a414786f62435ea7c0dd66b9 225 Gene3D G3DSA:2.40.70.10 86 212 3.6E-39 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_24410 945d4ee1a414786f62435ea7c0dd66b9 225 SUPERFAMILY SSF50630 88 219 2.69E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AL538_24410 945d4ee1a414786f62435ea7c0dd66b9 225 Pfam PF05618 Putative ATP-dependant zinc protease 88 222 3.6E-43 T 11-10-2018 AL538_22385 3cf6e0f573eda007c8dce1d4a82a5805 148 Pfam PF11911 Protein of unknown function (DUF3429) 7 146 4.7E-27 T 11-10-2018 IPR021836 Protein of unknown function DUF3429 AL538_26770 9207dcfcdbbe5139ce611241156f3b50 219 SUPERFAMILY SSF74653 139 213 2.35E-17 T 11-10-2018 AL538_26770 9207dcfcdbbe5139ce611241156f3b50 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 213 7.5E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL538_26770 9207dcfcdbbe5139ce611241156f3b50 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 217 6.0E-10 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL538_26770 9207dcfcdbbe5139ce611241156f3b50 219 Gene3D G3DSA:3.30.2420.10 136 219 3.6E-18 T 11-10-2018 AL538_14580 e8dd57ce478f9653b8cb1565b2fcec27 405 Pfam PF12704 MacB-like periplasmic core domain 32 212 8.9E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_14580 e8dd57ce478f9653b8cb1565b2fcec27 405 Pfam PF02687 FtsX-like permease family 299 398 2.1E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_14580 e8dd57ce478f9653b8cb1565b2fcec27 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 405 1.1E-134 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AL538_15025 ca9bf8fbcbabf98e72404a19707d3b3f 111 SUPERFAMILY SSF52794 2 97 6.63E-31 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_15025 ca9bf8fbcbabf98e72404a19707d3b3f 111 Gene3D G3DSA:3.40.50.2300 1 111 5.6E-39 T 11-10-2018 AL538_15025 ca9bf8fbcbabf98e72404a19707d3b3f 111 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 1.2E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_15025 ca9bf8fbcbabf98e72404a19707d3b3f 111 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 85 4.6E-28 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_06530 793bd622416a65b8ca46cd533d0c341e 246 SUPERFAMILY SSF160950 1 245 2.09E-94 T 11-10-2018 IPR036268 ZapD domain superfamily AL538_06530 793bd622416a65b8ca46cd533d0c341e 246 Gene3D G3DSA:2.60.440.10 6 245 1.0E-88 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal AL538_06530 793bd622416a65b8ca46cd533d0c341e 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.961 T 11-10-2018 IPR009777 Cell division protein ZapD AL538_06530 793bd622416a65b8ca46cd533d0c341e 246 Pfam PF07072 Cell division protein 18 224 3.5E-76 T 11-10-2018 IPR009777 Cell division protein ZapD AL538_06530 793bd622416a65b8ca46cd533d0c341e 246 Gene3D G3DSA:1.10.3900.10 12 178 1.0E-88 T 11-10-2018 AL538_27340 efc0afc26fc0e787e530479a5b95f462 290 SMART SM00729 15 233 1.8E-30 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_27340 efc0afc26fc0e787e530479a5b95f462 290 Pfam PF04055 Radical SAM superfamily 20 184 2.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_27340 efc0afc26fc0e787e530479a5b95f462 290 SUPERFAMILY SSF102114 8 258 4.71E-35 T 11-10-2018 AL538_27340 efc0afc26fc0e787e530479a5b95f462 290 Gene3D G3DSA:3.20.20.70 13 242 1.6E-19 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_02495 2423a9089a9956a8946197fd352c857b 175 Pfam PF03691 Uncharacterised protein family (UPF0167) 3 174 4.3E-58 T 11-10-2018 IPR005363 Uncharacterised protein family UPF0167 AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 SMART SM00729 23 247 7.6E-47 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 Pfam PF04055 Radical SAM superfamily 43 201 8.3E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 Pfam PF16199 Radical_SAM C-terminal domain 209 279 4.2E-16 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 Gene3D G3DSA:3.80.30.20 42 272 2.7E-17 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 SUPERFAMILY SSF102114 13 268 3.66E-50 T 11-10-2018 AL538_11765 65dcaf182f9858cecb49e876983dc6c8 314 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 3.2E-134 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 AL538_02290 0a874cc39566be74a3452676a03f539b 144 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 29 141 1.6E-15 T 11-10-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 AL538_02290 0a874cc39566be74a3452676a03f539b 144 Gene3D G3DSA:3.90.1720.70 1 144 8.9E-14 T 11-10-2018 AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 497 3.6E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 Pfam PF05231 MASE1 16 276 7.9E-18 T 11-10-2018 IPR007895 MASE1 AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 SUPERFAMILY SSF55874 381 497 2.23E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 Gene3D G3DSA:3.30.565.10 369 498 3.1E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 SMART SM00387 407 499 1.3E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_24500 4b572e60eefb19f0a0722a2bb9561b9f 499 Pfam PF07730 Histidine kinase 304 367 5.9E-11 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 SUPERFAMILY SSF54197 2 112 6.65E-35 T 11-10-2018 IPR036265 HIT-like superfamily AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 Pfam PF01230 HIT domain 12 109 1.1E-29 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 Gene3D G3DSA:3.30.428.10 1 111 4.1E-36 T 11-10-2018 IPR036265 HIT-like superfamily AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 PRINTS PR00332 Histidine triad family signature 27 45 2.9E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 PRINTS PR00332 Histidine triad family signature 95 105 2.9E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL538_14525 b79d9b8566679c96c4179dfd54a2bed2 116 PRINTS PR00332 Histidine triad family signature 6 22 2.9E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AL538_05585 67bfbcbdccc40223e1f4481283cc2510 222 Gene3D G3DSA:1.10.3680.10 90 222 1.5E-12 T 11-10-2018 IPR029024 TerB-like AL538_05585 67bfbcbdccc40223e1f4481283cc2510 222 Pfam PF04391 Protein of unknown function (DUF533) 43 220 4.6E-62 T 11-10-2018 IPR007486 Inner membrane protein YebE AL538_05585 67bfbcbdccc40223e1f4481283cc2510 222 SUPERFAMILY SSF158682 81 221 1.02E-26 T 11-10-2018 IPR029024 TerB-like AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 SUPERFAMILY SSF53850 89 284 1.01E-28 T 11-10-2018 AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 SUPERFAMILY SSF46785 1 107 9.49E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 Gene3D G3DSA:3.40.190.10 80 168 1.1E-12 T 11-10-2018 AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 Gene3D G3DSA:3.40.190.10 173 249 1.5E-8 T 11-10-2018 AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 Gene3D G3DSA:1.10.10.10 1 79 1.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21805 4ff791dd6a25611e7fc1e6dfafcf02e8 288 Pfam PF03466 LysR substrate binding domain 88 283 1.0E-28 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_07330 cb0017e122a3381257470cb19ace151f 165 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 6.0E-55 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AL538_07330 cb0017e122a3381257470cb19ace151f 165 Pfam PF02470 MlaD protein 40 118 1.1E-19 T 11-10-2018 IPR003399 Mce/MlaD AL538_17250 3a277dec0f002a139650d98ada897ead 321 Gene3D G3DSA:3.40.50.410 83 284 8.3E-61 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_17250 3a277dec0f002a139650d98ada897ead 321 SMART SM00327 83 284 7.8E-20 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17250 3a277dec0f002a139650d98ada897ead 321 Pfam PF00092 von Willebrand factor type A domain 85 277 1.0E-32 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_17250 3a277dec0f002a139650d98ada897ead 321 SUPERFAMILY SSF53300 81 280 2.52E-39 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.0E-46 T 11-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 Pfam PF00462 Glutaredoxin 3 69 1.4E-15 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 SUPERFAMILY SSF52833 3 81 7.42E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 66 79 2.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 3 21 2.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 PRINTS PR00160 Glutaredoxin signature 52 65 2.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AL538_16280 861ba22858002f7672b90c37cd97a9cf 88 Gene3D G3DSA:3.40.30.10 1 84 7.5E-25 T 11-10-2018 AL538_05785 0bac34c04ae1982b663c58664cceace2 607 SUPERFAMILY SSF53649 246 571 1.2E-59 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_05785 0bac34c04ae1982b663c58664cceace2 607 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 4.3E-52 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal AL538_05785 0bac34c04ae1982b663c58664cceace2 607 PIRSF PIRSF004950 1 606 5.2E-231 T 11-10-2018 IPR012159 Inner membrane protein YejM AL538_05785 0bac34c04ae1982b663c58664cceace2 607 Gene3D G3DSA:3.40.720.10 240 545 1.3E-52 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_05785 0bac34c04ae1982b663c58664cceace2 607 Pfam PF00884 Sulfatase 250 519 2.3E-32 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_12845 10717def4cf1efb7b51ff6fc8eeae4da 149 Pfam PF03477 ATP cone domain 50 136 1.1E-17 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AL538_12845 10717def4cf1efb7b51ff6fc8eeae4da 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.421 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL538_12845 10717def4cf1efb7b51ff6fc8eeae4da 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.8E-73 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AL538_00780 4d640c278f6d568d1e27beb7d45605de 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 2.1E-230 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AL538_00780 4d640c278f6d568d1e27beb7d45605de 477 SUPERFAMILY SSF81442 13 467 3.53E-122 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_00780 4d640c278f6d568d1e27beb7d45605de 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_00780 4d640c278f6d568d1e27beb7d45605de 477 Gene3D G3DSA:1.20.210.10 6 474 4.1E-205 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_00780 4d640c278f6d568d1e27beb7d45605de 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 2.9E-115 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_25445 1f4f119f5a9b0a47a22a6326920dd383 130 Pfam PF12680 SnoaL-like domain 17 112 1.2E-11 T 11-10-2018 IPR037401 SnoaL-like domain AL538_25445 1f4f119f5a9b0a47a22a6326920dd383 130 Gene3D G3DSA:3.10.450.50 7 130 3.2E-31 T 11-10-2018 AL538_25445 1f4f119f5a9b0a47a22a6326920dd383 130 SUPERFAMILY SSF54427 9 120 1.79E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_10705 5dc418015d766821e1a19635aa79ab33 378 Gene3D G3DSA:3.40.50.11820 30 363 3.3E-100 T 11-10-2018 AL538_10705 5dc418015d766821e1a19635aa79ab33 378 Gene3D G3DSA:3.40.50.12580 193 362 3.3E-100 T 11-10-2018 AL538_10705 5dc418015d766821e1a19635aa79ab33 378 SUPERFAMILY SSF53756 152 320 1.7E-13 T 11-10-2018 AL538_10705 5dc418015d766821e1a19635aa79ab33 378 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 28 371 3.2E-95 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 1.6E-127 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 SUPERFAMILY SSF56796 5 381 1.23E-137 T 11-10-2018 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 Gene3D G3DSA:3.40.50.1970 2 183 4.5E-57 T 11-10-2018 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 Gene3D G3DSA:1.20.1090.10 184 382 4.9E-79 T 11-10-2018 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_22915 ae5440c8b0669f77a22a7f02dd90c1f6 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AL538_05565 ab5099e8dbd46e2f53a969f504409d70 528 Pfam PF03806 AbgT putative transporter family 19 526 5.9E-227 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 510 2.9E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 SUPERFAMILY SSF58104 236 545 1.24E-74 T 11-10-2018 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 SMART SM00304 214 268 1.2E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 Pfam PF00672 HAMP domain 215 264 1.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.3E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 1.3E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 1.3E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 SMART SM00283 283 544 8.9E-73 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_15410 63d1493dcd0a587ddadc639ad5fe49ff 545 Gene3D G3DSA:1.10.287.950 213 545 7.1E-74 T 11-10-2018 AL538_00920 18649be41a6410326403200854592215 278 Gene3D G3DSA:1.10.10.10 215 277 7.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_00920 18649be41a6410326403200854592215 278 PIRSF PIRSF012524 1 278 2.7E-96 T 11-10-2018 IPR014464 Conserved virulence factor B AL538_00920 18649be41a6410326403200854592215 278 Pfam PF13509 S1 domain 4 63 3.3E-22 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain AL538_00920 18649be41a6410326403200854592215 278 Pfam PF13509 S1 domain 71 132 5.9E-5 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain AL538_10280 d2dea0480685d075961bb0d0aa085c4b 111 SUPERFAMILY SSF54523 31 109 3.41E-23 T 11-10-2018 AL538_10280 d2dea0480685d075961bb0d0aa085c4b 111 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 9.5E-36 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AL538_10280 d2dea0480685d075961bb0d0aa085c4b 111 Gene3D G3DSA:3.30.1300.30 24 111 2.1E-36 T 11-10-2018 AL538_10280 d2dea0480685d075961bb0d0aa085c4b 111 Pfam PF02501 Type II secretion system (T2SS), protein I 34 109 1.1E-21 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AL538_18385 3d50f823890a1da1e395b562d8fb8145 275 SUPERFAMILY SSF51658 1 274 4.15E-58 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_18385 3d50f823890a1da1e395b562d8fb8145 275 Gene3D G3DSA:3.20.20.150 4 275 3.3E-53 T 11-10-2018 AL538_18385 3d50f823890a1da1e395b562d8fb8145 275 Pfam PF01261 Xylose isomerase-like TIM barrel 20 208 5.5E-26 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL538_27485 fffbf4032b17d06370348fe56f83ade2 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.6E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_23500 c078ebf56e990d912058e4b563620a27 307 Pfam PF01497 Periplasmic binding protein 52 281 7.9E-25 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_23500 c078ebf56e990d912058e4b563620a27 307 Gene3D G3DSA:3.40.50.1980 139 306 2.1E-46 T 11-10-2018 AL538_23500 c078ebf56e990d912058e4b563620a27 307 Gene3D G3DSA:3.40.50.1980 28 137 1.8E-28 T 11-10-2018 AL538_23500 c078ebf56e990d912058e4b563620a27 307 SUPERFAMILY SSF53807 29 291 4.71E-56 T 11-10-2018 AL538_14615 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 11-10-2018 IPR005651 Trm112-like AL538_14615 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 AL538_14615 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 11-10-2018 AL538_14615 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 11-10-2018 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 SUPERFAMILY SSF52540 1 640 5.91E-162 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 3.6E-73 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.1E-78 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.786 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Gene3D G3DSA:3.40.50.300 4 266 2.9E-99 T 11-10-2018 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Gene3D G3DSA:1.10.10.160 108 181 2.9E-99 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Gene3D G3DSA:3.40.50.300 274 634 3.6E-123 T 11-10-2018 AL538_09855 c9fae382b8234b09ceff0a39aef07098 671 Gene3D G3DSA:1.10.486.10 377 546 3.6E-123 T 11-10-2018 AL538_17460 19fe35571a2942aacec866260d1ca89f 165 SUPERFAMILY SSF48452 4 112 1.11E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05550 e179d4c7e237920ed4f5606e60787ba7 419 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 5 394 3.4E-110 T 11-10-2018 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AL538_05550 e179d4c7e237920ed4f5606e60787ba7 419 SUPERFAMILY SSF56801 161 259 8.24E-5 T 11-10-2018 AL538_05550 e179d4c7e237920ed4f5606e60787ba7 419 Gene3D G3DSA:3.40.50.12780 6 322 3.7E-30 T 11-10-2018 AL538_07320 a7db0562e273c0f95f3db7084f534a55 106 Pfam PF13466 STAS domain 15 93 4.7E-19 T 11-10-2018 IPR002645 STAS domain AL538_07320 a7db0562e273c0f95f3db7084f534a55 106 Gene3D G3DSA:3.30.750.24 5 102 4.5E-13 T 11-10-2018 IPR036513 STAS domain superfamily AL538_07320 a7db0562e273c0f95f3db7084f534a55 106 SUPERFAMILY SSF52091 13 97 6.08E-15 T 11-10-2018 IPR036513 STAS domain superfamily AL538_17115 1865e8482cab40a5b6cc2f9dd2391fd7 212 Pfam PF02397 Bacterial sugar transferase 14 207 2.4E-63 T 11-10-2018 IPR003362 Bacterial sugar transferase AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 759 247.904 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.0E-47 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Pfam PF12838 4Fe-4S dicluster domain 378 430 1.0E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Gene3D G3DSA:1.10.1060.10 367 445 1.6E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.4E-188 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 SUPERFAMILY SSF46548 336 446 4.19E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Gene3D G3DSA:3.40.50.11540 145 290 1.6E-12 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Pfam PF10531 SLBB domain 296 345 1.1E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 4.2E-34 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain AL538_04155 5fdc6781cd5b49a210625b209c0258ab 946 SUPERFAMILY SSF142019 95 302 3.01E-59 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_10580 3b135b737e5891001482a255f653fc4d 236 SUPERFAMILY SSF56112 44 196 1.23E-17 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_10580 3b135b737e5891001482a255f653fc4d 236 Gene3D G3DSA:1.10.510.10 143 234 4.5E-14 T 11-10-2018 AL538_10580 3b135b737e5891001482a255f653fc4d 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 8.0E-69 T 11-10-2018 AL538_10580 3b135b737e5891001482a255f653fc4d 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.962 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AL538_10010 9ca85c74625290bff925576e2dd5f5b3 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.9E-115 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL538_10010 9ca85c74625290bff925576e2dd5f5b3 279 Gene3D G3DSA:3.40.50.150 1 279 8.3E-115 T 11-10-2018 AL538_10010 9ca85c74625290bff925576e2dd5f5b3 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.317 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AL538_10010 9ca85c74625290bff925576e2dd5f5b3 279 SUPERFAMILY SSF53335 9 273 2.49E-95 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_26460 c7ca9567536d6cd1f60ac947708ef498 123 Pfam PF12680 SnoaL-like domain 18 90 3.8E-8 T 11-10-2018 IPR037401 SnoaL-like domain AL538_26460 c7ca9567536d6cd1f60ac947708ef498 123 SUPERFAMILY SSF54427 2 117 5.93E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_26460 c7ca9567536d6cd1f60ac947708ef498 123 Gene3D G3DSA:3.10.450.50 7 116 3.6E-16 T 11-10-2018 AL538_22650 a4fe4a70b98dde6ec24f5e93d4149bcc 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 5.1E-250 T 11-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AL538_22650 a4fe4a70b98dde6ec24f5e93d4149bcc 591 Gene3D G3DSA:3.40.50.1820 229 516 1.1E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_22650 a4fe4a70b98dde6ec24f5e93d4149bcc 591 SUPERFAMILY SSF53474 225 526 1.06E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_22650 a4fe4a70b98dde6ec24f5e93d4149bcc 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.2E-73 T 11-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 511 531 4.6E-7 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 583 4.6E-7 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 453 477 4.6E-7 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 481 500 4.6E-7 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 SUPERFAMILY SSF82171 27 396 2.49E-20 T 11-10-2018 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 Pfam PF00326 Prolyl oligopeptidase family 442 652 4.5E-48 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 SUPERFAMILY SSF53474 396 652 1.16E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_10370 bef6561fd2a5d49ee60eb6b97add84bd 653 Gene3D G3DSA:3.40.50.1820 377 653 8.1E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_21910 48f4d8bf0442e62476da816df0b0e49f 235 SUPERFAMILY SSF55681 4 233 1.49E-46 T 11-10-2018 AL538_21910 48f4d8bf0442e62476da816df0b0e49f 235 Gene3D G3DSA:3.30.930.10 3 235 5.7E-44 T 11-10-2018 AL538_11880 a978cd7716f1fbf348a8c07108a11e67 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 2.2E-149 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL538_11880 a978cd7716f1fbf348a8c07108a11e67 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 2.0E-132 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL538_07895 4b228c42558e2729779e63382b9c6f71 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.865 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL538_07895 4b228c42558e2729779e63382b9c6f71 156 PIRSF PIRSF002122 3 156 5.1E-63 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AL538_07895 4b228c42558e2729779e63382b9c6f71 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.1E-71 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AL538_07895 4b228c42558e2729779e63382b9c6f71 156 Gene3D G3DSA:1.10.455.10 2 155 1.1E-64 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AL538_07895 4b228c42558e2729779e63382b9c6f71 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_07895 4b228c42558e2729779e63382b9c6f71 156 SUPERFAMILY SSF47973 6 149 1.7E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AL538_07895 4b228c42558e2729779e63382b9c6f71 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.2E-66 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 SUPERFAMILY SSF52172 4 116 5.41E-27 T 11-10-2018 IPR011006 CheY-like superfamily AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 Pfam PF00072 Response regulator receiver domain 6 112 9.1E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.0E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 SMART SM00448 3 111 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 SMART SM00862 147 218 6.0E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 Gene3D G3DSA:1.10.10.10 118 220 1.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 Gene3D G3DSA:3.40.50.2300 1 117 1.6E-28 T 11-10-2018 AL538_24325 98fb9c258a093f83ff679eb99410ab42 220 SUPERFAMILY SSF46894 125 218 3.4E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_15260 43232a23266645c8b1d2164daa71ea9d 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 3.5E-50 T 11-10-2018 IPR012672 Type III secretion system YscX AL538_15260 43232a23266645c8b1d2164daa71ea9d 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 3.6E-46 T 11-10-2018 IPR012672 Type III secretion system YscX AL538_03205 f0e39d12d1eebcc801fc7a07e7ce46ec 200 SUPERFAMILY SSF48695 10 189 1.45E-25 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily AL538_03205 f0e39d12d1eebcc801fc7a07e7ce46ec 200 Gene3D G3DSA:3.90.10.10 142 197 1.9E-5 T 11-10-2018 AL538_03205 f0e39d12d1eebcc801fc7a07e7ce46ec 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 2.3E-62 T 11-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 AL538_03205 f0e39d12d1eebcc801fc7a07e7ce46ec 200 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 188 1.0E-4 T 11-10-2018 IPR010177 Doubled CXXCH motif AL538_03205 f0e39d12d1eebcc801fc7a07e7ce46ec 200 Gene3D G3DSA:3.90.10.10 38 141 1.5E-6 T 11-10-2018 AL538_10730 3287ae758670376a875afd74368f85cf 335 Pfam PF02397 Bacterial sugar transferase 148 330 1.8E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase AL538_08915 badc545a1a098990bec18daeb747ea8e 419 Pfam PF00589 Phage integrase family 218 386 5.9E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_08915 badc545a1a098990bec18daeb747ea8e 419 Gene3D G3DSA:3.30.160.390 7 100 1.6E-15 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AL538_08915 badc545a1a098990bec18daeb747ea8e 419 Gene3D G3DSA:1.10.150.130 101 215 1.2E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_08915 badc545a1a098990bec18daeb747ea8e 419 SUPERFAMILY SSF56349 109 391 1.18E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_08915 badc545a1a098990bec18daeb747ea8e 419 Gene3D G3DSA:1.10.443.10 216 394 1.9E-25 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_08915 badc545a1a098990bec18daeb747ea8e 419 Pfam PF13356 Arm DNA-binding domain 8 98 1.0E-13 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AL538_19380 b992d8678881d2631e1b6be7510cf3a2 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 250 2.9E-10 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_19380 b992d8678881d2631e1b6be7510cf3a2 251 Gene3D G3DSA:3.40.190.10 110 212 3.2E-15 T 11-10-2018 AL538_19380 b992d8678881d2631e1b6be7510cf3a2 251 Gene3D G3DSA:3.40.190.10 33 250 3.2E-15 T 11-10-2018 AL538_19380 b992d8678881d2631e1b6be7510cf3a2 251 SUPERFAMILY SSF53850 27 250 5.25E-23 T 11-10-2018 AL538_19575 59cadb9a6a32eb783616044a33b96220 235 Gene3D G3DSA:3.40.605.10 39 221 2.1E-9 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_19575 59cadb9a6a32eb783616044a33b96220 235 SUPERFAMILY SSF53720 9 180 1.83E-11 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_11030 cf2b7f75e35da9f1a11233cd51a0b8fb 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 160 8.7E-44 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 AL538_11030 cf2b7f75e35da9f1a11233cd51a0b8fb 164 Gene3D G3DSA:2.40.50.870 23 164 2.3E-46 T 11-10-2018 AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 3.6E-59 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 Gene3D G3DSA:3.30.450.40 226 352 3.0E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 SUPERFAMILY SSF55874 420 553 9.17E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 SUPERFAMILY SSF55781 226 351 4.66E-7 T 11-10-2018 AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 Gene3D G3DSA:3.30.565.10 413 556 2.1E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_12020 3146960cfeb4bb36637de1acbafdd589 556 Pfam PF13492 GAF domain 241 351 1.8E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 AL538_02270 b92fd95e753534e2ca03577bd250af38 75 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 3 75 5.0E-5 T 11-10-2018 IPR020353 mRNA interferase toxin YafO AL538_02270 b92fd95e753534e2ca03577bd250af38 75 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 2 73 1.3E-11 T 11-10-2018 IPR020353 mRNA interferase toxin YafO AL538_27465 a369abbc7b711d7740768fa8b2288b5c 33 Pfam PF11665 Protein of unknown function (DUF3265) 6 33 4.5E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_19640 a0c23d6a68841e423d4dfd81bc65404e 235 Pfam PF00929 Exonuclease 52 215 1.2E-13 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_19640 a0c23d6a68841e423d4dfd81bc65404e 235 Gene3D G3DSA:3.30.420.10 46 228 6.1E-29 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_19640 a0c23d6a68841e423d4dfd81bc65404e 235 SMART SM00479 50 224 1.7E-17 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_19640 a0c23d6a68841e423d4dfd81bc65404e 235 SUPERFAMILY SSF53098 45 223 6.79E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_19350 72133e666d5ac660fcb2b63df987aa86 336 Pfam PF11168 Protein of unknown function (DUF2955) 17 155 3.5E-27 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 6.5E-113 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.1E-75 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 SMART SM00116 320 368 1.6E-4 T 11-10-2018 IPR000644 CBS domain AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 Pfam PF01226 Formate/nitrite transporter 17 277 6.3E-71 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 Pfam PF00571 CBS domain 313 365 3.4E-9 T 11-10-2018 IPR000644 CBS domain AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 Pfam PF00571 CBS domain 382 464 0.008 T 11-10-2018 IPR000644 CBS domain AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 SUPERFAMILY SSF54631 312 464 3.48E-20 T 11-10-2018 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 Gene3D G3DSA:3.10.580.10 305 465 1.7E-22 T 11-10-2018 AL538_24075 444b5569c6ed8a8a8806ce7a456bfe9b 483 Gene3D G3DSA:1.20.1080.10 3 270 1.2E-87 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AL538_20870 984cc518af21ea8d2fddfbd76027ac53 95 Gene3D G3DSA:3.40.50.2300 1 90 1.7E-20 T 11-10-2018 AL538_20870 984cc518af21ea8d2fddfbd76027ac53 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 2.3E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_20870 984cc518af21ea8d2fddfbd76027ac53 95 SUPERFAMILY SSF52794 1 90 1.99E-21 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 SUPERFAMILY SSF53613 11 324 2.18E-66 T 11-10-2018 IPR029056 Ribokinase-like AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 Pfam PF00294 pfkB family carbohydrate kinase 15 316 4.6E-53 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 8 328 51.07 T 11-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 324 2.6E-112 T 11-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 Gene3D G3DSA:2.20.150.10 20 115 1.6E-81 T 11-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 AL538_18405 7784a71b8d9bdfb103157badaada48f4 328 Gene3D G3DSA:3.40.1190.20 15 303 1.6E-81 T 11-10-2018 IPR029056 Ribokinase-like AL538_10045 c178384543486d5d0d126385bf3fc5fd 292 SUPERFAMILY SSF103481 184 276 7.45E-6 T 11-10-2018 AL538_10045 c178384543486d5d0d126385bf3fc5fd 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.7E-71 T 11-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AL538_10045 c178384543486d5d0d126385bf3fc5fd 292 Pfam PF00892 EamA-like transporter family 138 275 7.7E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_10045 c178384543486d5d0d126385bf3fc5fd 292 SUPERFAMILY SSF103481 35 131 5.75E-6 T 11-10-2018 AL538_03740 470f2cb347cf131cce0b2647dc9e74de 615 Gene3D G3DSA:3.10.105.10 322 548 1.6E-40 T 11-10-2018 AL538_03740 470f2cb347cf131cce0b2647dc9e74de 615 SUPERFAMILY SSF53850 45 557 8.14E-94 T 11-10-2018 AL538_03740 470f2cb347cf131cce0b2647dc9e74de 615 PIRSF PIRSF002741 2 570 6.1E-63 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_03740 470f2cb347cf131cce0b2647dc9e74de 615 Gene3D G3DSA:3.40.190.10 20 321 4.9E-44 T 11-10-2018 AL538_03740 470f2cb347cf131cce0b2647dc9e74de 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 491 7.2E-61 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_19440 814c0ad13cd6f52f46b7b6d271e2a049 143 Gene3D G3DSA:3.30.420.270 63 132 1.6E-17 T 11-10-2018 AL538_19440 814c0ad13cd6f52f46b7b6d271e2a049 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 4.4E-25 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_19440 814c0ad13cd6f52f46b7b6d271e2a049 143 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.7E-47 T 11-10-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0016020|GO:0055085 AL538_16765 164e1d493a441f0d19153861d75e9bd2 117 Pfam PF00893 Small Multidrug Resistance protein 12 101 7.0E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL538_16765 164e1d493a441f0d19153861d75e9bd2 117 SUPERFAMILY SSF103481 14 112 9.42E-19 T 11-10-2018 AL538_16765 164e1d493a441f0d19153861d75e9bd2 117 Gene3D G3DSA:1.10.3730.20 9 117 7.8E-34 T 11-10-2018 AL538_25765 6d9cb502142da3db3b826a5859b10620 145 Pfam PF00293 NUDIX domain 9 109 1.9E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_25765 6d9cb502142da3db3b826a5859b10620 145 Gene3D G3DSA:3.90.79.10 1 129 9.9E-21 T 11-10-2018 AL538_25765 6d9cb502142da3db3b826a5859b10620 145 SUPERFAMILY SSF55811 6 110 1.14E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_25765 6d9cb502142da3db3b826a5859b10620 145 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_15865 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.30.60.20 144 189 1.2E-7 T 11-10-2018 AL538_15865 d1bb1ed794116010dcac496547b60561 192 PIRSF PIRSF035805 1 192 1.1E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL538_15865 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.40.50.300 2 140 5.2E-24 T 11-10-2018 AL538_15865 d1bb1ed794116010dcac496547b60561 192 Pfam PF00265 Thymidine kinase 2 186 3.2E-59 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL538_15865 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF52540 2 141 5.57E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15865 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 11-10-2018 AL538_15865 d1bb1ed794116010dcac496547b60561 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.748 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL538_15865 d1bb1ed794116010dcac496547b60561 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AL538_07195 2cdc21c19ba9defae3feb55667a88c4f 103 PIRSF PIRSF000699 1 103 1.1E-37 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL538_07195 2cdc21c19ba9defae3feb55667a88c4f 103 Gene3D G3DSA:1.20.58.280 1 102 1.2E-34 T 11-10-2018 AL538_07195 2cdc21c19ba9defae3feb55667a88c4f 103 SUPERFAMILY SSF46973 2 98 5.1E-34 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 AL538_07195 2cdc21c19ba9defae3feb55667a88c4f 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.2E-33 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 AL538_14040 fc601881c5571f652664ccb9fdb08fbf 154 PIRSF PIRSF020565 1 154 2.6E-64 T 11-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AL538_14040 fc601881c5571f652664ccb9fdb08fbf 154 SUPERFAMILY SSF54637 4 143 2.61E-29 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_14040 fc601881c5571f652664ccb9fdb08fbf 154 Gene3D G3DSA:3.10.129.10 3 143 3.0E-22 T 11-10-2018 AL538_07690 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain AL538_07690 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 11-10-2018 IPR028976 CheC-like superfamily AL538_07690 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 11-10-2018 IPR028976 CheC-like superfamily AL538_21200 7f4517fed289a9fd491d7dec8fd3c65f 76 Gene3D G3DSA:1.10.10.2690 1 76 3.4E-21 T 11-10-2018 AL538_21200 7f4517fed289a9fd491d7dec8fd3c65f 76 Pfam PF03333 Adhesin biosynthesis transcription regulatory protein 2 76 3.1E-18 T 11-10-2018 IPR004356 Adhesin operon regulatory protein GO:0006355 AL538_09325 af1252537cb6bbe24026dd7c2e6c5bd3 255 SUPERFAMILY SSF110399 1 236 1.23E-85 T 11-10-2018 AL538_09325 af1252537cb6bbe24026dd7c2e6c5bd3 255 Gene3D G3DSA:3.20.20.70 1 253 1.1E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_09325 af1252537cb6bbe24026dd7c2e6c5bd3 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.426 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL538_09325 af1252537cb6bbe24026dd7c2e6c5bd3 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 3.1E-110 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AL538_07235 12c5ef1a65bbb8a31c212027cb9317d3 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 8.3E-69 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AL538_07235 12c5ef1a65bbb8a31c212027cb9317d3 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 5 354 4.1E-133 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.162 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 Gene3D G3DSA:2.40.50.140 5 151 2.5E-28 T 11-10-2018 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 SUPERFAMILY SSF50249 12 149 2.94E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 1.3E-199 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 1.6E-80 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 SUPERFAMILY SSF55681 156 502 6.08E-118 T 11-10-2018 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 Gene3D G3DSA:3.30.930.10 152 505 2.7E-130 T 11-10-2018 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 1.2E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_11910 fdea41a3092d8b2704cec7b430f797a6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AL538_21885 86f76f9d2dba6dcfc8f1c97c09699475 289 Gene3D G3DSA:3.60.15.10 18 256 3.0E-27 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_21885 86f76f9d2dba6dcfc8f1c97c09699475 289 SMART SM00849 38 220 5.3E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_21885 86f76f9d2dba6dcfc8f1c97c09699475 289 SUPERFAMILY SSF56281 24 244 3.34E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_21885 86f76f9d2dba6dcfc8f1c97c09699475 289 Pfam PF00753 Metallo-beta-lactamase superfamily 38 220 2.5E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_18955 cc2ce9e00a68fbcc699b99a3a1eb16eb 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 1.8E-50 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 AL538_18955 cc2ce9e00a68fbcc699b99a3a1eb16eb 157 Gene3D G3DSA:3.40.35.10 1 156 6.7E-55 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AL538_18955 cc2ce9e00a68fbcc699b99a3a1eb16eb 157 SUPERFAMILY SSF52728 3 156 7.06E-51 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 AL538_18955 cc2ce9e00a68fbcc699b99a3a1eb16eb 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 2.2E-66 T 11-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 AL538_19095 4df5f04bb134277518aa60a220462347 586 PIRSF PIRSF037343 1 582 1.9E-284 T 11-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted AL538_19095 4df5f04bb134277518aa60a220462347 586 Pfam PF03611 PTS system sugar-specific permease component 15 415 2.8E-123 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AL538_19095 4df5f04bb134277518aa60a220462347 586 Gene3D G3DSA:3.40.50.2300 489 579 7.0E-18 T 11-10-2018 AL538_19095 4df5f04bb134277518aa60a220462347 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 5.4E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_19095 4df5f04bb134277518aa60a220462347 586 SUPERFAMILY SSF52794 490 580 2.88E-14 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_13590 fb4f8a4c91c73192b05f5cd04f858c84 135 Gene3D G3DSA:3.10.580.10 1 135 2.3E-26 T 11-10-2018 AL538_13590 fb4f8a4c91c73192b05f5cd04f858c84 135 SMART SM00116 83 130 1.8E-5 T 11-10-2018 IPR000644 CBS domain AL538_13590 fb4f8a4c91c73192b05f5cd04f858c84 135 SMART SM00116 16 65 120.0 T 11-10-2018 IPR000644 CBS domain AL538_13590 fb4f8a4c91c73192b05f5cd04f858c84 135 SUPERFAMILY SSF54631 7 126 5.68E-24 T 11-10-2018 AL538_13590 fb4f8a4c91c73192b05f5cd04f858c84 135 Pfam PF00571 CBS domain 78 125 3.3E-10 T 11-10-2018 IPR000644 CBS domain AL538_05280 1181fbcd0f9075d38bd905b34c891c84 190 Gene3D G3DSA:3.40.50.360 1 190 2.0E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_05280 1181fbcd0f9075d38bd905b34c891c84 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL538_05280 1181fbcd0f9075d38bd905b34c891c84 190 SUPERFAMILY SSF52218 4 187 7.99E-58 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_05280 1181fbcd0f9075d38bd905b34c891c84 190 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 186 6.5E-40 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AL538_05280 1181fbcd0f9075d38bd905b34c891c84 190 Pfam PF03358 NADPH-dependent FMN reductase 13 135 6.0E-13 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Pfam PF10531 SLBB domain 281 327 6.5E-11 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Pfam PF10531 SLBB domain 558 602 4.1E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Pfam PF10531 SLBB domain 198 247 2.2E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.10.560.10 359 450 1.3E-7 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.10.560.10 783 861 3.6E-11 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.10.560.10 279 358 2.2E-13 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.10.560.10 543 641 4.5E-12 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.30.1950.10 138 194 1.9E-19 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 SUPERFAMILY SSF142984 652 688 9.42E-5 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Gene3D G3DSA:3.10.560.10 200 274 1.9E-19 T 11-10-2018 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Pfam PF06251 Capsule biosynthesis GfcC 662 863 4.5E-11 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 AL538_10670 cdb1df15150c8caa31cfd753b29b56d2 890 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 179 3.1E-13 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL538_03145 eb2ffa2f69c0cfa61d0d3bade67a48e4 530 SUPERFAMILY SSF141523 304 465 1.01E-18 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AL538_03145 eb2ffa2f69c0cfa61d0d3bade67a48e4 530 Pfam PF03734 L,D-transpeptidase catalytic domain 305 471 3.7E-29 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AL538_03145 eb2ffa2f69c0cfa61d0d3bade67a48e4 530 SUPERFAMILY SSF53955 253 323 1.57E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_03145 eb2ffa2f69c0cfa61d0d3bade67a48e4 530 Pfam PF01471 Putative peptidoglycan binding domain 238 277 2.8E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like AL538_24980 5255fc1b2f784bde301dceabd0e9eb7b 91 Pfam PF03206 Nitrogen fixation protein NifW 8 72 2.5E-5 T 11-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 Gene3D G3DSA:1.10.10.60 173 281 4.4E-20 T 11-10-2018 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 5.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 5.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 SMART SM00342 192 275 3.5E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 SUPERFAMILY SSF51215 27 143 1.7E-9 T 11-10-2018 IPR037923 Transcription regulator HTH-like AL538_19000 eb05010e025ae022c904bb284b73f88b 283 SUPERFAMILY SSF46689 232 277 2.06E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_19000 eb05010e025ae022c904bb284b73f88b 283 Pfam PF12833 Helix-turn-helix domain 199 276 6.1E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_04325 c2f04fa84dfc030b7c567106fff63249 416 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 174 413 2.5E-63 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL538_04325 c2f04fa84dfc030b7c567106fff63249 416 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 413 1.4E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_04325 c2f04fa84dfc030b7c567106fff63249 416 SUPERFAMILY SSF161098 177 400 8.76E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04325 c2f04fa84dfc030b7c567106fff63249 416 Gene3D G3DSA:1.10.3720.10 192 415 5.9E-32 T 11-10-2018 IPR035906 MetI-like superfamily AL538_04325 c2f04fa84dfc030b7c567106fff63249 416 Pfam PF11812 Domain of unknown function (DUF3333) 18 150 2.2E-25 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 AL538_04205 6e383a63be6804d117bf6b1fdb6b8963 209 Pfam PF13743 Thioredoxin 6 175 5.5E-23 T 11-10-2018 AL538_04205 6e383a63be6804d117bf6b1fdb6b8963 209 Gene3D G3DSA:3.40.30.10 1 208 4.1E-59 T 11-10-2018 AL538_04205 6e383a63be6804d117bf6b1fdb6b8963 209 SUPERFAMILY SSF52833 3 184 1.53E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_05655 1b9777a746b168520384f3f6ed6cdea7 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.4E-62 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_05655 1b9777a746b168520384f3f6ed6cdea7 210 PIRSF PIRSF006102 3 210 1.3E-73 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 AL538_05655 1b9777a746b168520384f3f6ed6cdea7 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.857 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL538_05655 1b9777a746b168520384f3f6ed6cdea7 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 8.9E-110 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AL538_24760 ec481acb98b3219ecdbdb15fc11a9aaf 331 SUPERFAMILY SSF53187 37 330 6.95E-49 T 11-10-2018 AL538_24760 ec481acb98b3219ecdbdb15fc11a9aaf 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 3.7E-72 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_24760 ec481acb98b3219ecdbdb15fc11a9aaf 331 Gene3D G3DSA:3.40.630.10 14 329 9.8E-70 T 11-10-2018 AL538_24760 ec481acb98b3219ecdbdb15fc11a9aaf 331 PIRSF PIRSF039012 9 331 2.5E-91 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 AL538_16960 2de182c85cb4e962e61d95303ca8e3c7 583 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 581 1.2E-110 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_16960 2de182c85cb4e962e61d95303ca8e3c7 583 Pfam PF05947 Type VI secretion system, TssF 6 580 4.4E-122 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 Pfam PF00733 Asparagine synthase 211 366 4.7E-56 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.8E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 SUPERFAMILY SSF56235 1 196 7.29E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 Gene3D G3DSA:3.60.20.10 2 193 2.5E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.2E-114 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 PIRSF PIRSF001589 362 506 3.1E-27 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 PIRSF PIRSF001589 1 368 8.9E-105 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 Gene3D G3DSA:3.40.50.620 194 514 3.4E-112 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_13650 55c5d39f72606b74726f91e8b19529e1 554 SUPERFAMILY SSF52402 208 481 2.74E-74 T 11-10-2018 AL538_22550 9978b4bc89b87a9c8e12300325cbe324 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.99 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL538_22550 9978b4bc89b87a9c8e12300325cbe324 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 4.7E-42 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL538_22550 9978b4bc89b87a9c8e12300325cbe324 104 PIRSF PIRSF028773 1 104 3.2E-46 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL538_22550 9978b4bc89b87a9c8e12300325cbe324 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-45 T 11-10-2018 IPR007458 Protein of unknown function DUF496 AL538_00205 45abd6e832838ea92ae695506dd5c57d 327 SUPERFAMILY SSF52540 5 301 2.17E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00205 45abd6e832838ea92ae695506dd5c57d 327 Gene3D G3DSA:3.40.50.300 1 208 1.4E-51 T 11-10-2018 AL538_00205 45abd6e832838ea92ae695506dd5c57d 327 Gene3D G3DSA:1.10.8.300 209 324 7.7E-35 T 11-10-2018 AL538_00205 45abd6e832838ea92ae695506dd5c57d 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 5.5E-61 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL538_00205 45abd6e832838ea92ae695506dd5c57d 327 PIRSF PIRSF002849 1 327 6.0E-128 T 11-10-2018 AL538_23105 45abd6e832838ea92ae695506dd5c57d 327 SUPERFAMILY SSF52540 5 301 2.17E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23105 45abd6e832838ea92ae695506dd5c57d 327 Gene3D G3DSA:3.40.50.300 1 208 1.4E-51 T 11-10-2018 AL538_23105 45abd6e832838ea92ae695506dd5c57d 327 Gene3D G3DSA:1.10.8.300 209 324 7.7E-35 T 11-10-2018 AL538_23105 45abd6e832838ea92ae695506dd5c57d 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 5.5E-61 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AL538_23105 45abd6e832838ea92ae695506dd5c57d 327 PIRSF PIRSF002849 1 327 6.0E-128 T 11-10-2018 AL538_01710 5ff707382972ad6920f33ffab4a277ff 1247 Gene3D G3DSA:3.30.160.280 1013 1079 6.9E-15 T 11-10-2018 AL538_01710 5ff707382972ad6920f33ffab4a277ff 1247 Gene3D G3DSA:3.30.160.280 1186 1247 5.6E-12 T 11-10-2018 AL538_01710 5ff707382972ad6920f33ffab4a277ff 1247 Gene3D G3DSA:2.60.40.10 172 265 3.0E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AL538_01710 5ff707382972ad6920f33ffab4a277ff 1247 Pfam PF12561 ToxR activated gene A lipoprotein 723 857 1.0E-44 T 11-10-2018 IPR022218 ToxR activated gene A lipoprotein AL538_01710 5ff707382972ad6920f33ffab4a277ff 1247 Pfam PF10462 Peptidase M66 358 657 1.4E-79 T 11-10-2018 IPR019503 Peptidase M66 domain GO:0004222 AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 SUPERFAMILY SSF52540 9 262 4.64E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.1E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 Gene3D G3DSA:3.40.50.300 8 331 1.2E-77 T 11-10-2018 AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 Pfam PF00005 ABC transporter 35 192 1.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 SMART SM00382 43 241 7.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06320 517ca95a1975a4706dacda3e4a09cc9f 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.3E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 Pfam PF00060 Ligand-gated ion channel 139 250 5.8E-10 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 SUPERFAMILY SSF81324 128 230 6.91E-5 T 11-10-2018 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 Gene3D G3DSA:3.40.190.10 324 360 2.0E-17 T 11-10-2018 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 SUPERFAMILY SSF53850 14 361 4.75E-43 T 11-10-2018 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 SMART SM00062 31 363 9.6E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 Gene3D G3DSA:3.40.190.10 27 136 2.2E-22 T 11-10-2018 AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 360 8.2E-41 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AL538_17590 0e3040ebc66f514d81eabf1f2c3212d3 363 Gene3D G3DSA:3.40.190.10 236 323 2.0E-17 T 11-10-2018 AL538_06605 37a16b4ed9c572038e81d59c82d4a614 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.2E-169 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_06605 37a16b4ed9c572038e81d59c82d4a614 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.3E-158 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_06605 37a16b4ed9c572038e81d59c82d4a614 376 PIRSF PIRSF015658 1 376 1.3E-178 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_18780 72dd15e9d4e615f0c66d322bb18c781b 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 360 4.8E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_18780 72dd15e9d4e615f0c66d322bb18c781b 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 361 1.0E-35 T 11-10-2018 IPR000160 GGDEF domain AL538_18780 72dd15e9d4e615f0c66d322bb18c781b 363 SUPERFAMILY SSF55073 219 361 6.75E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_18780 72dd15e9d4e615f0c66d322bb18c781b 363 SMART SM00267 202 363 7.6E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_18780 72dd15e9d4e615f0c66d322bb18c781b 363 Gene3D G3DSA:3.30.70.270 210 363 7.6E-40 T 11-10-2018 AL538_03155 e0c316345fa429c74006758b13fbe69e 345 Pfam PF09375 Imelysin 47 324 3.9E-42 T 11-10-2018 IPR018976 Imelysin-like domain AL538_03155 e0c316345fa429c74006758b13fbe69e 345 Gene3D G3DSA:1.20.1420.20 29 345 8.4E-73 T 11-10-2018 IPR038352 Imelysin-like domain superfamily AL538_26855 df0cabe68f7766426041163f012e7a89 141 PIRSF PIRSF006276 1 141 3.8E-44 T 11-10-2018 IPR006015 Universal stress protein A AL538_26855 df0cabe68f7766426041163f012e7a89 141 Gene3D G3DSA:3.40.50.620 2 141 5.4E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_26855 df0cabe68f7766426041163f012e7a89 141 Pfam PF00582 Universal stress protein family 3 138 1.8E-14 T 11-10-2018 IPR006016 UspA AL538_26855 df0cabe68f7766426041163f012e7a89 141 SUPERFAMILY SSF52402 3 139 3.6E-25 T 11-10-2018 AL538_09935 4542ad69680f48a52a2958b27014fd17 190 Gene3D G3DSA:1.10.10.10 125 189 1.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09935 4542ad69680f48a52a2958b27014fd17 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 5 187 2.4E-58 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like AL538_09935 4542ad69680f48a52a2958b27014fd17 190 SUPERFAMILY SSF88659 124 187 5.05E-6 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AL538_09935 4542ad69680f48a52a2958b27014fd17 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 3.7E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AL538_09935 4542ad69680f48a52a2958b27014fd17 190 Pfam PF07638 ECF sigma factor 6 188 4.8E-30 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 11-10-2018 AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 Gene3D G3DSA:3.40.50.1000 3 263 1.4E-79 T 11-10-2018 IPR023214 HAD superfamily AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 2.4E-62 T 11-10-2018 IPR000150 Cof family GO:0016787 AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 SUPERFAMILY SSF56784 1 267 2.22E-75 T 11-10-2018 IPR036412 HAD-like superfamily AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.0E-28 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 11-10-2018 AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 Gene3D G3DSA:3.30.1240.10 86 191 1.4E-79 T 11-10-2018 AL538_17060 f090d9ef3a98de9567bc9ffac3eb1101 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.6E-67 T 11-10-2018 AL538_20070 9a5ad515798b5e9d3ab0d5a1f9782697 316 Pfam PF01032 FecCD transport family 19 312 3.2E-54 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_20070 9a5ad515798b5e9d3ab0d5a1f9782697 316 PRINTS PR01988 Putative bacilysin exporter bacE signature 287 308 6.9E-5 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AL538_20070 9a5ad515798b5e9d3ab0d5a1f9782697 316 PRINTS PR01988 Putative bacilysin exporter bacE signature 168 190 6.9E-5 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 AL538_20070 9a5ad515798b5e9d3ab0d5a1f9782697 316 Gene3D G3DSA:1.10.3470.10 3 315 2.3E-60 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_20070 9a5ad515798b5e9d3ab0d5a1f9782697 316 SUPERFAMILY SSF81345 7 312 1.57E-57 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 SUPERFAMILY SSF52833 27 143 4.23E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 Gene3D G3DSA:2.20.28.140 2 37 1.7E-13 T 11-10-2018 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 Gene3D G3DSA:3.40.30.10 41 144 1.6E-32 T 11-10-2018 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 Pfam PF00085 Thioredoxin 45 140 6.2E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 47 141 8.3E-35 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 PIRSF PIRSF000077 39 142 1.8E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 PIRSF PIRSF000077 25 34 2700.0 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 11-10-2018 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 11-10-2018 AL538_24560 2c66ee5f42de44e453ef28bbe5ad9721 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 11-10-2018 AL538_03635 ea1ddacdaad39f3fdbf21941a99a8a67 107 Gene3D G3DSA:1.10.260.40 5 67 4.1E-11 T 11-10-2018 AL538_03635 ea1ddacdaad39f3fdbf21941a99a8a67 107 Pfam PF01381 Helix-turn-helix 8 57 1.7E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_03635 ea1ddacdaad39f3fdbf21941a99a8a67 107 SMART SM00530 7 61 5.1E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_03635 ea1ddacdaad39f3fdbf21941a99a8a67 107 SUPERFAMILY SSF47413 7 66 2.53E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_01285 515aecc425f6d4c70d3fe2707e8c7ac6 364 SUPERFAMILY SSF69322 27 347 6.54E-26 T 11-10-2018 AL538_01285 515aecc425f6d4c70d3fe2707e8c7ac6 364 Gene3D G3DSA:2.130.10.10 26 275 8.6E-22 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_01285 515aecc425f6d4c70d3fe2707e8c7ac6 364 Gene3D G3DSA:2.130.10.10 276 357 6.9E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 7.7E-16 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:1.10.10.10 3 82 3.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF53697 97 260 2.23E-37 T 11-10-2018 AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 Pfam PF01380 SIS domain 124 250 2.1E-18 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 Gene3D G3DSA:3.40.50.10490 94 273 2.0E-40 T 11-10-2018 AL538_26645 a88cb62e622b300ea2ac82441bf8cf91 287 SUPERFAMILY SSF46689 5 79 1.15E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 202 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 205 228 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 55 74 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 160 180 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 16 35 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 35 55 1.1E-28 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_00450 c449458a19a6410a5708feb6c9915559 228 Pfam PF00813 FliP family 18 227 4.3E-42 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_08210 ce37cfd0dff648d994151e93c424b280 295 SUPERFAMILY SSF103481 36 140 1.05E-12 T 11-10-2018 AL538_08210 ce37cfd0dff648d994151e93c424b280 295 SUPERFAMILY SSF103481 210 293 3.14E-10 T 11-10-2018 AL538_08210 ce37cfd0dff648d994151e93c424b280 295 Pfam PF00892 EamA-like transporter family 4 135 2.6E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_08210 ce37cfd0dff648d994151e93c424b280 295 Pfam PF00892 EamA-like transporter family 156 293 1.6E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_26655 1feaca759e21dbec2b9ec43032e14e08 308 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 92 299 1.4E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_26655 1feaca759e21dbec2b9ec43032e14e08 308 SUPERFAMILY SSF56219 83 304 4.71E-23 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_26655 1feaca759e21dbec2b9ec43032e14e08 308 Gene3D G3DSA:3.60.10.10 87 307 1.6E-17 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_23760 77928156a43d084dd3ff34141c0eaa13 136 Gene3D G3DSA:3.40.630.30 2 136 5.4E-34 T 11-10-2018 AL538_23760 77928156a43d084dd3ff34141c0eaa13 136 Pfam PF13673 Acetyltransferase (GNAT) domain 35 135 3.6E-18 T 11-10-2018 IPR000182 GNAT domain AL538_23760 77928156a43d084dd3ff34141c0eaa13 136 SUPERFAMILY SSF55729 10 122 2.1E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_20785 0412af3a095fbe1d81f898756e5697ca 288 SUPERFAMILY SSF56935 58 278 1.28E-5 T 11-10-2018 AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 SUPERFAMILY SSF51556 81 387 5.13E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 SUPERFAMILY SSF51338 372 441 5.18E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 Gene3D G3DSA:3.20.20.140 82 386 1.6E-130 T 11-10-2018 AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 Pfam PF01979 Amidohydrolase family 77 438 2.9E-32 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 SUPERFAMILY SSF51338 25 95 5.18E-14 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_24480 89f6fb05f8a321375af1d9c1fd2afa53 443 Gene3D G3DSA:2.30.40.10 30 437 1.6E-130 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_10330 ce987aa75c137915141619a2a703a800 260 Gene3D G3DSA:3.40.50.1820 6 259 2.0E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_10330 ce987aa75c137915141619a2a703a800 260 SUPERFAMILY SSF53474 9 258 1.54E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_10330 ce987aa75c137915141619a2a703a800 260 Pfam PF00561 alpha/beta hydrolase fold 22 247 2.1E-25 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AL538_10330 ce987aa75c137915141619a2a703a800 260 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 45.553 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL538_10330 ce987aa75c137915141619a2a703a800 260 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 258 2.2E-103 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AL538_15660 45fe1d9bb42053bb10b1f38ef5fc85d3 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.869 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL538_15660 45fe1d9bb42053bb10b1f38ef5fc85d3 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 3.3E-63 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AL538_15660 45fe1d9bb42053bb10b1f38ef5fc85d3 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 196 7.1E-56 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL538_15660 45fe1d9bb42053bb10b1f38ef5fc85d3 208 Gene3D G3DSA:2.50.20.10 26 207 9.7E-47 T 11-10-2018 AL538_15660 45fe1d9bb42053bb10b1f38ef5fc85d3 208 SUPERFAMILY SSF89392 30 207 2.71E-51 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL538_27835 b9cabcb45bf3146f8011b6ef8ebc1e2a 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.5E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_14070 40aa93b225e782dabd0a6e6cf639d681 517 Pfam PF00221 Aromatic amino acid lyase 16 466 2.6E-162 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AL538_14070 40aa93b225e782dabd0a6e6cf639d681 517 Gene3D G3DSA:1.20.200.10 204 511 7.5E-102 T 11-10-2018 AL538_14070 40aa93b225e782dabd0a6e6cf639d681 517 SUPERFAMILY SSF48557 4 513 9.42E-173 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AL538_14070 40aa93b225e782dabd0a6e6cf639d681 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AL538_14070 40aa93b225e782dabd0a6e6cf639d681 517 Gene3D G3DSA:1.10.275.10 9 203 1.5E-56 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AL538_15525 357073be3f6cf063eba86456d500258d 238 Gene3D G3DSA:1.20.120.530 104 233 1.5E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15525 357073be3f6cf063eba86456d500258d 238 Pfam PF07729 FCD domain 107 226 6.7E-22 T 11-10-2018 IPR011711 GntR, C-terminal AL538_15525 357073be3f6cf063eba86456d500258d 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 4.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15525 357073be3f6cf063eba86456d500258d 238 SMART SM00895 106 227 6.6E-18 T 11-10-2018 IPR011711 GntR, C-terminal AL538_15525 357073be3f6cf063eba86456d500258d 238 SUPERFAMILY SSF46785 10 81 7.27E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15525 357073be3f6cf063eba86456d500258d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.6E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15525 357073be3f6cf063eba86456d500258d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.6E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15525 357073be3f6cf063eba86456d500258d 238 SMART SM00345 18 77 1.9E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15525 357073be3f6cf063eba86456d500258d 238 SUPERFAMILY SSF48008 105 228 1.31E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15525 357073be3f6cf063eba86456d500258d 238 Gene3D G3DSA:1.10.10.10 7 83 5.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22850 04926d4900f24677f205d359f95eac60 712 Gene3D G3DSA:3.40.50.300 474 712 3.8E-35 T 11-10-2018 AL538_22850 04926d4900f24677f205d359f95eac60 712 SMART SM00382 511 696 3.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_22850 04926d4900f24677f205d359f95eac60 712 Pfam PF00005 ABC transporter 502 650 1.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22850 04926d4900f24677f205d359f95eac60 712 Gene3D G3DSA:1.20.1560.10 160 470 2.0E-30 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_22850 04926d4900f24677f205d359f95eac60 712 SUPERFAMILY SSF52540 463 709 3.52E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_22850 04926d4900f24677f205d359f95eac60 712 SUPERFAMILY SSF90123 160 464 4.71E-35 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_22850 04926d4900f24677f205d359f95eac60 712 Pfam PF00664 ABC transporter transmembrane region 174 416 7.0E-10 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 SUPERFAMILY SSF54631 1 132 1.39E-32 T 11-10-2018 AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 SMART SM00116 11 59 1.7E-8 T 11-10-2018 IPR000644 CBS domain AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 SMART SM00116 84 131 5.0E-6 T 11-10-2018 IPR000644 CBS domain AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 Pfam PF00571 CBS domain 79 127 4.6E-9 T 11-10-2018 IPR000644 CBS domain AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 Pfam PF00571 CBS domain 4 58 1.0E-12 T 11-10-2018 IPR000644 CBS domain AL538_12285 e1f5ca6e7151ef51b8a161721d3c1dd3 148 Gene3D G3DSA:3.10.580.10 1 148 1.7E-49 T 11-10-2018 AL538_04020 d2ef8a9ff3f08552dc904f29214de4a0 264 SUPERFAMILY SSF52540 2 231 3.02E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04020 d2ef8a9ff3f08552dc904f29214de4a0 264 Gene3D G3DSA:3.40.50.300 1 257 3.6E-52 T 11-10-2018 AL538_04020 d2ef8a9ff3f08552dc904f29214de4a0 264 SMART SM00382 31 226 2.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04020 d2ef8a9ff3f08552dc904f29214de4a0 264 Pfam PF00005 ABC transporter 22 177 1.2E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_04020 d2ef8a9ff3f08552dc904f29214de4a0 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_08325 1a9bc35f63e7f1bf53bedd44f219e561 165 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 10 158 2.1E-34 T 11-10-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 AL538_24615 6bf2adf3cf37b53619dc12d8c128d0ee 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 8.0E-27 T 11-10-2018 IPR025232 Domain of unknown function DUF4174 AL538_26530 39703908885fea82d69b17dcc59acc12 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 2.1E-16 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AL538_26530 39703908885fea82d69b17dcc59acc12 178 SUPERFAMILY SSF89028 8 169 1.16E-36 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AL538_26530 39703908885fea82d69b17dcc59acc12 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 2.0E-61 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AL538_26530 39703908885fea82d69b17dcc59acc12 178 Gene3D G3DSA:1.20.1200.10 17 173 2.1E-24 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AL538_09000 f6766a87500f00216de779cd7cdad662 199 PIRSF PIRSF004553 18 198 3.5E-55 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL538_09000 f6766a87500f00216de779cd7cdad662 199 Gene3D G3DSA:3.40.50.150 6 198 7.8E-63 T 11-10-2018 AL538_09000 f6766a87500f00216de779cd7cdad662 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 2.0E-61 T 11-10-2018 AL538_09000 f6766a87500f00216de779cd7cdad662 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_09000 f6766a87500f00216de779cd7cdad662 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.4E-59 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AL538_09000 f6766a87500f00216de779cd7cdad662 199 SUPERFAMILY SSF53335 19 196 3.7E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_17920 3d9c0325cbbea92c60138d22928042d9 164 SUPERFAMILY SSF55729 2 147 6.53E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_17920 3d9c0325cbbea92c60138d22928042d9 164 Pfam PF13302 Acetyltransferase (GNAT) domain 31 141 4.6E-9 T 11-10-2018 IPR000182 GNAT domain AL538_17920 3d9c0325cbbea92c60138d22928042d9 164 Gene3D G3DSA:3.40.630.30 1 141 1.1E-17 T 11-10-2018 AL538_10425 8c62d9d105329e0b1cc7cd95b0641a6c 254 PIRSF PIRSF028069 4 254 1.1E-96 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL538_10425 8c62d9d105329e0b1cc7cd95b0641a6c 254 Pfam PF11932 Protein of unknown function (DUF3450) 13 249 7.9E-89 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL538_06045 c759b4d723ce689a02757bb3bcf6f6af 782 SUPERFAMILY SSF141371 466 548 2.75E-6 T 11-10-2018 AL538_06045 c759b4d723ce689a02757bb3bcf6f6af 782 Gene3D G3DSA:2.40.10.220 466 583 4.4E-6 T 11-10-2018 AL538_06045 c759b4d723ce689a02757bb3bcf6f6af 782 Pfam PF07238 PilZ domain 470 560 3.2E-11 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL538_06045 c759b4d723ce689a02757bb3bcf6f6af 782 Pfam PF07238 PilZ domain 145 229 5.3E-8 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL538_16250 82bd397967b1d8009f0288c8cdab1039 371 Gene3D G3DSA:2.40.370.10 250 371 3.0E-22 T 11-10-2018 IPR023374 AttH-like domain superfamily AL538_16250 82bd397967b1d8009f0288c8cdab1039 371 SUPERFAMILY SSF159245 53 371 5.89E-92 T 11-10-2018 AL538_16250 82bd397967b1d8009f0288c8cdab1039 371 Gene3D G3DSA:2.40.370.10 64 248 4.4E-53 T 11-10-2018 IPR023374 AttH-like domain superfamily AL538_16250 82bd397967b1d8009f0288c8cdab1039 371 Pfam PF07143 CrtC N-terminal lipocalin domain 76 245 5.7E-43 T 11-10-2018 IPR010791 AttH domain AL538_16250 82bd397967b1d8009f0288c8cdab1039 371 Pfam PF17186 Lipocalin-like domain 249 371 4.0E-32 T 11-10-2018 AL538_16215 7eb95169e21160aa83c38ec7250be877 573 Pfam PF00474 Sodium:solute symporter family 35 434 1.1E-48 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_16215 7eb95169e21160aa83c38ec7250be877 573 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 443 1.3E-83 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_16215 7eb95169e21160aa83c38ec7250be877 573 Gene3D G3DSA:1.20.1730.10 23 539 1.3E-119 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_24455 42c22c73a41a246806829790e8bb291e 97 Gene3D G3DSA:1.10.10.10 2 97 3.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_24455 42c22c73a41a246806829790e8bb291e 97 SUPERFAMILY SSF46785 9 95 2.86E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_24455 42c22c73a41a246806829790e8bb291e 97 SMART SM00418 14 92 5.1E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_24455 42c22c73a41a246806829790e8bb291e 97 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 6.1E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_24455 42c22c73a41a246806829790e8bb291e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 3.8E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_24455 42c22c73a41a246806829790e8bb291e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 3.8E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_24455 42c22c73a41a246806829790e8bb291e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 3.8E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AL538_12815 468973a09905c69596018560a597af2b 429 Pfam PF00860 Permease family 17 391 1.2E-54 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL538_12815 468973a09905c69596018560a597af2b 429 PIRSF PIRSF005353 1 429 2.7E-186 T 11-10-2018 IPR026033 Purine permease PbuG-like AL538_15670 3201dad49cde11680b4d788ceec86efa 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 2.1E-171 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 2.9E-35 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.039 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 SUPERFAMILY SSF55681 118 429 2.24E-97 T 11-10-2018 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.1E-29 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PIRSF PIRSF001529 1 435 6.4E-186 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 Gene3D G3DSA:3.30.930.10 107 434 3.1E-112 T 11-10-2018 AL538_15670 3201dad49cde11680b4d788ceec86efa 435 Gene3D G3DSA:1.10.287.40 1 106 1.9E-20 T 11-10-2018 AL538_12760 89a4c8ca48721af48db884bf208076dd 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12760 89a4c8ca48721af48db884bf208076dd 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.8E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12760 89a4c8ca48721af48db884bf208076dd 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 5.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 8.2E-58 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.361 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 SUPERFAMILY SSF51366 1 228 4.71E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 Gene3D G3DSA:3.20.20.70 2 232 2.7E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 SMART SM00934 5 226 3.5E-100 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_03745 0c98c6587a2ad7afd656db6a19bc997f 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 5.0E-51 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 SUPERFAMILY SSF54523 36 142 5.07E-38 T 11-10-2018 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 2.0E-42 T 11-10-2018 IPR013545 Type II secretion system protein G AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 Gene3D G3DSA:3.30.700.10 33 141 6.1E-44 T 11-10-2018 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 5.1E-58 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_10270 ae9c6973ed3b7c1fc7cf1d967e0eb77f 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 1.8E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.7E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 Pfam PF00072 Response regulator receiver domain 6 114 2.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 SMART SM00448 4 114 1.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 Gene3D G3DSA:1.10.10.10 130 230 5.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 Gene3D G3DSA:3.40.50.2300 2 129 3.2E-33 T 11-10-2018 AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 SMART SM00862 151 227 3.5E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 SUPERFAMILY SSF52172 4 135 2.28E-37 T 11-10-2018 IPR011006 CheY-like superfamily AL538_22480 077a9277d5c3a668a36cd821a4f0acf6 230 SUPERFAMILY SSF46894 137 228 9.64E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_15740 20ab6f643b711c15775a847e15d74bc6 418 SUPERFAMILY SSF53335 21 371 5.52E-90 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_15740 20ab6f643b711c15775a847e15d74bc6 418 PIRSF PIRSF003085 23 418 1.1E-119 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AL538_15740 20ab6f643b711c15775a847e15d74bc6 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 2.7E-80 T 11-10-2018 AL538_15740 20ab6f643b711c15775a847e15d74bc6 418 Gene3D G3DSA:3.40.50.150 149 418 7.6E-100 T 11-10-2018 AL538_07315 ee0abacca027f34f8bd79b1ad4860f46 84 SUPERFAMILY SSF82657 4 82 2.88E-28 T 11-10-2018 IPR036065 BolA-like superfamily AL538_07315 ee0abacca027f34f8bd79b1ad4860f46 84 Pfam PF01722 BolA-like protein 18 74 2.2E-14 T 11-10-2018 IPR002634 BolA protein AL538_07315 ee0abacca027f34f8bd79b1ad4860f46 84 PIRSF PIRSF003113 2 83 2.6E-22 T 11-10-2018 IPR002634 BolA protein AL538_07315 ee0abacca027f34f8bd79b1ad4860f46 84 Gene3D G3DSA:3.30.300.90 1 84 5.7E-33 T 11-10-2018 AL538_24100 9d4cb3615c8385916d98cf90cdb28607 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 6.5E-106 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AL538_24100 9d4cb3615c8385916d98cf90cdb28607 339 Pfam PF03741 Integral membrane protein TerC family 92 293 2.3E-54 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 SUPERFAMILY SSF51735 1 308 2.17E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 Gene3D G3DSA:3.90.25.10 173 295 2.6E-115 T 11-10-2018 AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.7E-126 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.194 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 8.8E-45 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AL538_10640 f3ca53c5db6c5b0dbe09742b89264d98 313 Gene3D G3DSA:3.40.50.720 3 307 2.6E-115 T 11-10-2018 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 SUPERFAMILY SSF51182 26 78 4.19E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 SUPERFAMILY SSF46689 181 227 3.76E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 SMART SM00342 194 277 1.5E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 Pfam PF12833 Helix-turn-helix domain 200 278 2.9E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 Gene3D G3DSA:1.10.10.60 177 227 4.9E-13 T 11-10-2018 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 Gene3D G3DSA:1.10.10.60 228 280 7.6E-17 T 11-10-2018 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 3.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 3.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_22010 8b6754f51623e39b1e5f011e4aca59d8 280 SUPERFAMILY SSF46689 230 279 4.48E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_16405 2a8800a004ee9b8442199e6ed1847649 411 Gene3D G3DSA:3.40.640.10 33 289 5.4E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_16405 2a8800a004ee9b8442199e6ed1847649 411 Gene3D G3DSA:3.90.1150.10 24 405 5.4E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_16405 2a8800a004ee9b8442199e6ed1847649 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 1.9E-164 T 11-10-2018 IPR011340 Cysteine desulfurase-related AL538_16405 2a8800a004ee9b8442199e6ed1847649 411 Pfam PF00266 Aminotransferase class-V 26 401 7.2E-68 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_16405 2a8800a004ee9b8442199e6ed1847649 411 SUPERFAMILY SSF53383 3 410 1.34E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_20270 0f814684efc671b51537a0800b08bddf 241 Gene3D G3DSA:1.20.144.10 5 235 3.2E-46 T 11-10-2018 AL538_20270 0f814684efc671b51537a0800b08bddf 241 Pfam PF01569 PAP2 superfamily 83 227 4.0E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_20270 0f814684efc671b51537a0800b08bddf 241 SMART SM00014 77 225 2.0E-10 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_20270 0f814684efc671b51537a0800b08bddf 241 SUPERFAMILY SSF48317 25 224 3.27E-20 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL538_18370 73eec991fa79b148581448c65f306eea 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 6.0E-50 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL538_18370 73eec991fa79b148581448c65f306eea 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.786 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AL538_18370 73eec991fa79b148581448c65f306eea 358 Pfam PF03193 RsgA GTPase 90 263 2.3E-49 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AL538_18370 73eec991fa79b148581448c65f306eea 358 SUPERFAMILY SSF52540 108 324 1.77E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18370 73eec991fa79b148581448c65f306eea 358 Gene3D G3DSA:3.40.50.300 92 263 4.5E-44 T 11-10-2018 AL538_18370 73eec991fa79b148581448c65f306eea 358 Gene3D G3DSA:1.10.40.50 266 337 2.6E-21 T 11-10-2018 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 SUPERFAMILY SSF88723 4 164 3.09E-39 T 11-10-2018 IPR029060 PIN-like domain superfamily AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 SMART SM00279 167 202 2.0E-9 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 3.3E-31 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 SMART SM00475 3 254 8.5E-71 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 Gene3D G3DSA:1.10.150.20 167 255 7.0E-22 T 11-10-2018 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 1.3E-23 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 Gene3D G3DSA:3.40.50.1010 1 166 1.5E-52 T 11-10-2018 AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 SUPERFAMILY SSF47807 164 258 1.12E-20 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AL538_12940 0b9a47ce06f5286439d0c00d830b36bf 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.77 T 11-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 Gene3D G3DSA:3.40.50.7700 1 161 6.8E-73 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 PIRSF PIRSF001338 1 160 3.2E-68 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 SMART SM01001 1 152 3.3E-103 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.382 T 11-10-2018 IPR033747 Class I PurE AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 Pfam PF00731 AIR carboxylase 2 150 2.0E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 7.8E-67 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AL538_09425 61858da5eb047f9e2422b029b0e5465a 161 SUPERFAMILY SSF52255 2 158 1.7E-66 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AL538_06535 20e5b0d0b310748b262f9463c5243c19 64 Gene3D G3DSA:3.30.50.10 1 64 1.9E-24 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AL538_06535 20e5b0d0b310748b262f9463c5243c19 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 7.4E-24 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL538_06535 20e5b0d0b310748b262f9463c5243c19 64 SUPERFAMILY SSF57716 2 62 3.99E-21 T 11-10-2018 AL538_06535 20e5b0d0b310748b262f9463c5243c19 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.451 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AL538_14980 7ccb67bfb9cbcf7c0b9bcf19e618f5ba 152 Gene3D G3DSA:3.30.450.150 2 152 4.4E-54 T 11-10-2018 IPR038084 GlcG-like domain superfamily AL538_14980 7ccb67bfb9cbcf7c0b9bcf19e618f5ba 152 PIRSF PIRSF008757 1 152 5.8E-60 T 11-10-2018 IPR010371 Uncharacterised protein family UPF0303 AL538_14980 7ccb67bfb9cbcf7c0b9bcf19e618f5ba 152 Pfam PF03928 Haem-degrading 20 147 9.7E-32 T 11-10-2018 IPR005624 Haem-degrading AL538_14980 7ccb67bfb9cbcf7c0b9bcf19e618f5ba 152 SUPERFAMILY SSF143744 11 150 7.85E-28 T 11-10-2018 IPR038084 GlcG-like domain superfamily AL538_14980 7ccb67bfb9cbcf7c0b9bcf19e618f5ba 152 Hamap MF_00761 UPF0303 protein . 4 152 29.686 T 11-10-2018 IPR010371 Uncharacterised protein family UPF0303 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 Gene3D G3DSA:3.30.70.360 192 381 1.5E-125 T 11-10-2018 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 Gene3D G3DSA:3.30.70.360 212 293 1.5E-125 T 11-10-2018 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 18 460 1.9E-104 T 11-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 SUPERFAMILY SSF53187 8 465 1.46E-58 T 11-10-2018 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 Gene3D G3DSA:3.40.630.10 19 465 1.5E-125 T 11-10-2018 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 Pfam PF01546 Peptidase family M20/M25/M40 89 462 3.3E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_17705 447bb1934a297f9daaa396c9052e564f 467 SUPERFAMILY SSF55031 192 381 3.98E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_06365 93fbd84b5b35499af9a2eda2950f59cd 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 1.2E-206 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype AL538_06365 93fbd84b5b35499af9a2eda2950f59cd 409 SUPERFAMILY SSF111352 12 383 5.89E-105 T 11-10-2018 AL538_06365 93fbd84b5b35499af9a2eda2950f59cd 409 Gene3D G3DSA:1.10.3430.10 2 408 8.6E-119 T 11-10-2018 IPR029020 Ammonium/urea transporter AL538_06365 93fbd84b5b35499af9a2eda2950f59cd 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AL538_06365 93fbd84b5b35499af9a2eda2950f59cd 409 Pfam PF00909 Ammonium Transporter Family 18 402 1.4E-99 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 75 95 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 95 114 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 2.7E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 58 254 6.6E-77 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 154 166 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 140 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 126 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 54 63 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 2.8E-14 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_21355 fe6e658951219a30635a9d31ecce3611 255 Pfam PF00813 FliP family 58 250 2.2E-75 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_01175 fc78cb68402b477d897eb26501425068 239 Pfam PF00563 EAL domain 24 226 1.6E-21 T 11-10-2018 IPR001633 EAL domain AL538_01175 fc78cb68402b477d897eb26501425068 239 Gene3D G3DSA:3.20.20.450 15 235 2.9E-25 T 11-10-2018 IPR035919 EAL domain superfamily AL538_01175 fc78cb68402b477d897eb26501425068 239 SMART SM00052 17 231 5.1E-7 T 11-10-2018 IPR001633 EAL domain AL538_01175 fc78cb68402b477d897eb26501425068 239 SUPERFAMILY SSF141868 20 231 1.1E-27 T 11-10-2018 IPR035919 EAL domain superfamily AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 Gene3D G3DSA:1.10.10.10 2 86 7.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 Gene3D G3DSA:3.40.190.290 93 288 6.1E-34 T 11-10-2018 AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 SUPERFAMILY SSF46785 3 85 3.86E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 SUPERFAMILY SSF53850 90 288 8.87E-22 T 11-10-2018 AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 Pfam PF03466 LysR substrate binding domain 90 249 3.0E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_15880 ef1b201a73dc00608d1bbd1fab2136ee 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_24955 a6d3133b1a3fba1b39c537464431379a 112 SUPERFAMILY SSF47226 1 111 4.45E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_24955 a6d3133b1a3fba1b39c537464431379a 112 Gene3D G3DSA:1.20.120.160 1 112 2.1E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_04305 293ac98c949fa673ce0aa1653eecf36a 312 SUPERFAMILY SSF103481 49 146 3.79E-9 T 11-10-2018 AL538_04305 293ac98c949fa673ce0aa1653eecf36a 312 Pfam PF00892 EamA-like transporter family 13 144 2.2E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_04305 293ac98c949fa673ce0aa1653eecf36a 312 Pfam PF00892 EamA-like transporter family 156 288 2.2E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_21165 b3725a7d592891077d74ce00e42a03a9 467 Pfam PF10080 Predicted membrane protein (DUF2318) 304 405 3.2E-28 T 11-10-2018 IPR018758 Domain of unknown function DUF2318, membrane AL538_21165 b3725a7d592891077d74ce00e42a03a9 467 Pfam PF04945 YHS domain 413 457 8.3E-13 T 11-10-2018 IPR007029 YHS domain AL538_22345 a8fa9e91fb4d3a57cd4806a1b71f72ce 451 SUPERFAMILY SSF51905 14 426 2.47E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_22345 a8fa9e91fb4d3a57cd4806a1b71f72ce 451 Pfam PF12831 FAD dependent oxidoreductase 23 443 1.5E-102 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal AL538_22345 a8fa9e91fb4d3a57cd4806a1b71f72ce 451 Gene3D G3DSA:3.50.50.60 3 195 4.9E-17 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.9E-34 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 SMART SM00829 11 335 1.2E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 Gene3D G3DSA:3.90.180.10 11 332 8.0E-136 T 11-10-2018 AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 SUPERFAMILY SSF50129 1 161 1.05E-56 T 11-10-2018 IPR011032 GroES-like superfamily AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 SUPERFAMILY SSF51735 138 306 2.2E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 Pfam PF00107 Zinc-binding dehydrogenase 175 301 1.7E-32 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_08550 ace6f0c79ee2cf28be8678c2501b6ff7 338 Gene3D G3DSA:3.40.50.720 148 286 8.0E-136 T 11-10-2018 AL538_20025 abe546b7f8fe8405b71bcde978e148d9 142 Gene3D G3DSA:1.20.120.1490 32 141 1.2E-17 T 11-10-2018 AL538_20025 abe546b7f8fe8405b71bcde978e148d9 142 Pfam PF07813 LTXXQ motif family protein 37 126 8.4E-10 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL538_08285 48bf0ec3309326499c08277893f9bd60 227 Gene3D G3DSA:3.40.109.10 5 226 3.7E-51 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_08285 48bf0ec3309326499c08277893f9bd60 227 Pfam PF00881 Nitroreductase family 33 202 1.8E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AL538_08285 48bf0ec3309326499c08277893f9bd60 227 SUPERFAMILY SSF55469 21 226 1.22E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AL538_07775 6de993fdcf482eae76cafed771bea137 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 4.7E-45 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AL538_07775 6de993fdcf482eae76cafed771bea137 197 PIRSF PIRSF016482 1 197 1.8E-69 T 11-10-2018 IPR007445 Pilus assembly protein, PilO AL538_07775 6de993fdcf482eae76cafed771bea137 197 Gene3D G3DSA:3.30.70.60 92 197 1.1E-25 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 Gene3D G3DSA:3.40.640.10 36 297 4.3E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 PIRSF PIRSF005572 22 405 1.1E-49 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 404 3.0E-178 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 Pfam PF00266 Aminotransferase class-V 25 394 2.3E-151 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 Gene3D G3DSA:3.90.1150.10 9 398 4.3E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_12520 78bb5fec6a0397cb0bc3cd7369de35a1 407 SUPERFAMILY SSF53383 6 401 4.03E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_01485 7139dc23f3dabfa115679beced56ab92 506 Gene3D G3DSA:2.60.120.600 326 506 1.8E-57 T 11-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily AL538_01485 7139dc23f3dabfa115679beced56ab92 506 Gene3D G3DSA:2.60.40.1610 98 247 1.5E-81 T 11-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily AL538_01485 7139dc23f3dabfa115679beced56ab92 506 Gene3D G3DSA:1.10.3360.10 71 311 1.5E-81 T 11-10-2018 IPR023289 VPA0735-like domain superfamily AL538_01485 7139dc23f3dabfa115679beced56ab92 506 Pfam PF06863 Protein of unknown function (DUF1254) 102 229 7.6E-28 T 11-10-2018 IPR010679 Domain of unknown function DUF1254 AL538_01485 7139dc23f3dabfa115679beced56ab92 506 SUPERFAMILY SSF160935 40 505 1.27E-142 T 11-10-2018 AL538_01485 7139dc23f3dabfa115679beced56ab92 506 Pfam PF06742 Protein of unknown function (DUF1214) 385 489 2.5E-25 T 11-10-2018 IPR010621 Domain of unknown function DUF1214 AL538_09650 eb85a280c0495570e0b017779ee2f736 146 Pfam PF00258 Flavodoxin 4 136 7.0E-22 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL538_09650 eb85a280c0495570e0b017779ee2f736 146 Gene3D G3DSA:3.40.50.360 1 144 3.1E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_09650 eb85a280c0495570e0b017779ee2f736 146 SUPERFAMILY SSF52218 2 143 7.54E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_15155 c68bdc75767a34634c6ffc50b3813e81 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL538_15155 c68bdc75767a34634c6ffc50b3813e81 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 2.2E-27 T 11-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AL538_12620 1ca465a758ab02385896a60f966cf4e8 161 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 4 124 1.2E-29 T 11-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AL538_12620 1ca465a758ab02385896a60f966cf4e8 161 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 6 131 3.2E-34 T 11-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 AL538_12620 1ca465a758ab02385896a60f966cf4e8 161 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 64 70 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AL538_17735 3e54f98f1c8bd818f930f8d29a932cbe 236 Gene3D G3DSA:3.20.20.70 4 236 1.9E-35 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17735 3e54f98f1c8bd818f930f8d29a932cbe 236 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 207 1.8E-25 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AL538_17735 3e54f98f1c8bd818f930f8d29a932cbe 236 SUPERFAMILY SSF51366 1 221 2.93E-38 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_17405 72bac99a081de811aca86e22936fe571 393 Gene3D G3DSA:1.20.1250.20 200 386 9.2E-16 T 11-10-2018 AL538_17405 72bac99a081de811aca86e22936fe571 393 Gene3D G3DSA:1.20.1250.20 6 198 5.2E-8 T 11-10-2018 AL538_17405 72bac99a081de811aca86e22936fe571 393 SUPERFAMILY SSF103473 13 378 3.92E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_17405 72bac99a081de811aca86e22936fe571 393 Pfam PF07690 Major Facilitator Superfamily 15 345 4.2E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.9E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.9E-8 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 SMART SM00283 284 545 8.8E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 512 1.1E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 178 3.9E-11 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AL538_15605 0162ba2160829aa70698c3ababd16f22 546 Gene3D G3DSA:1.10.287.950 227 546 2.8E-65 T 11-10-2018 AL538_15605 0162ba2160829aa70698c3ababd16f22 546 SUPERFAMILY SSF58104 246 546 9.59E-66 T 11-10-2018 AL538_11850 025486294e4c815ba712ecd8e7e8d356 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 2.5E-25 T 11-10-2018 IPR021932 Protein of unknown function DUF3545 AL538_26575 3018f8e0f420061b1bfae0ab3be203c0 260 SMART SM00382 30 219 3.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26575 3018f8e0f420061b1bfae0ab3be203c0 260 SUPERFAMILY SSF52540 9 237 1.04E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26575 3018f8e0f420061b1bfae0ab3be203c0 260 Pfam PF00005 ABC transporter 21 170 2.7E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26575 3018f8e0f420061b1bfae0ab3be203c0 260 Gene3D G3DSA:3.40.50.300 2 259 3.0E-64 T 11-10-2018 AL538_25550 ad814c1943af947b0d430f0c9cc2d5c9 1220 SUPERFAMILY SSF52540 63 304 5.85E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_25550 ad814c1943af947b0d430f0c9cc2d5c9 1220 Pfam PF07693 KAP family P-loop domain 51 288 3.6E-4 T 11-10-2018 IPR011646 KAP family P-loop domain AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 266 3.9E-100 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 SUPERFAMILY SSF111364 30 266 6.54E-83 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 Gene3D G3DSA:2.40.230.20 23 266 2.6E-80 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 6.7E-6 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 6.7E-6 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AL538_05720 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 172 195 6.7E-6 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.3E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.854 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 1.8E-164 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 6.6E-64 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 Gene3D G3DSA:3.90.226.10 4 319 4.1E-121 T 11-10-2018 AL538_05395 de0218e102d993e1db3cf9b01bf64999 319 SUPERFAMILY SSF52096 5 318 4.21E-106 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_08880 e40ddf093f626d1b23ecb8ef6f68363f 112 PIRSF PIRSF031804 1 112 1.6E-41 T 11-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 AL538_08880 e40ddf093f626d1b23ecb8ef6f68363f 112 Pfam PF06803 Protein of unknown function (DUF1232) 50 85 3.3E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AL538_16155 fd628e9f76c74fefbde6af28323a1fc7 234 Pfam PF13673 Acetyltransferase (GNAT) domain 119 230 5.0E-13 T 11-10-2018 IPR000182 GNAT domain AL538_16155 fd628e9f76c74fefbde6af28323a1fc7 234 SUPERFAMILY SSF55729 111 230 2.7E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_16155 fd628e9f76c74fefbde6af28323a1fc7 234 Gene3D G3DSA:3.40.630.30 40 231 1.4E-21 T 11-10-2018 AL538_16325 fdc12a4909f47188b0ec54dbd9e3c988 165 SMART SM00448 4 125 4.1E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16325 fdc12a4909f47188b0ec54dbd9e3c988 165 SUPERFAMILY SSF52172 1 141 1.71E-19 T 11-10-2018 IPR011006 CheY-like superfamily AL538_16325 fdc12a4909f47188b0ec54dbd9e3c988 165 Pfam PF00072 Response regulator receiver domain 6 125 2.1E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16325 fdc12a4909f47188b0ec54dbd9e3c988 165 Gene3D G3DSA:3.40.50.2300 5 132 7.7E-18 T 11-10-2018 AL538_05385 b2a0cc5fd946c4807deb72353c6c23cc 104 SUPERFAMILY SSF46626 4 104 3.58E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_05385 b2a0cc5fd946c4807deb72353c6c23cc 104 Gene3D G3DSA:1.10.760.10 22 104 3.3E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_05385 b2a0cc5fd946c4807deb72353c6c23cc 104 Pfam PF00034 Cytochrome c 28 104 3.3E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 142 6.5E-17 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 1.9E-238 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 Pfam PF00437 Type II/IV secretion system protein 188 455 1.9E-86 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 Gene3D G3DSA:3.40.50.300 290 560 3.9E-105 T 11-10-2018 AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 SUPERFAMILY SSF160246 2 140 4.97E-33 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 SUPERFAMILY SSF52540 171 558 1.16E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 Gene3D G3DSA:3.30.450.90 153 288 1.8E-46 T 11-10-2018 AL538_06510 4ccfa838779f5e408cf59e75cfb7c4c0 561 Gene3D G3DSA:3.30.300.160 66 140 4.8E-9 T 11-10-2018 AL538_26305 99352846e9b690c591abc8fb3cbcff31 454 Pfam PF07670 Nucleoside recognition 140 232 3.0E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 SMART SM00382 385 572 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00900 676f265a2a7628ded7014aa2724668eb 598 Gene3D G3DSA:3.40.50.300 352 597 2.9E-81 T 11-10-2018 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 Pfam PF00664 ABC transporter transmembrane region 25 312 9.4E-30 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 SUPERFAMILY SSF52540 355 591 1.36E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_00900 676f265a2a7628ded7014aa2724668eb 598 Pfam PF00005 ABC transporter 376 524 1.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 SUPERFAMILY SSF90123 12 345 9.94E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_00900 676f265a2a7628ded7014aa2724668eb 598 Gene3D G3DSA:1.20.1560.10 1 344 9.0E-55 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_24335 d1f322b3dddb4ca40e8267103db36519 464 PIRSF PIRSF000204 1 464 1.1E-235 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AL538_24335 d1f322b3dddb4ca40e8267103db36519 464 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 462 6.4E-203 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AL538_24335 d1f322b3dddb4ca40e8267103db36519 464 SUPERFAMILY SSF52467 291 464 2.62E-79 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AL538_24335 d1f322b3dddb4ca40e8267103db36519 464 Gene3D G3DSA:3.40.50.1220 288 464 4.7E-89 T 11-10-2018 AL538_03800 0a1a8fb0578717d50ed9c7d82decb626 241 SUPERFAMILY SSF46689 10 80 1.74E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03800 0a1a8fb0578717d50ed9c7d82decb626 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_03800 0a1a8fb0578717d50ed9c7d82decb626 241 Gene3D G3DSA:1.10.357.10 2 191 4.3E-14 T 11-10-2018 AL538_03800 0a1a8fb0578717d50ed9c7d82decb626 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_03800 0a1a8fb0578717d50ed9c7d82decb626 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_24755 a7931b883ac2d668340a34b8d9a40c25 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 3.2E-137 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL538_12225 ab151eb15209784bcd43c3c1d847d0a8 557 Gene3D G3DSA:1.10.3720.10 285 550 6.0E-30 T 11-10-2018 IPR035906 MetI-like superfamily AL538_12225 ab151eb15209784bcd43c3c1d847d0a8 557 SUPERFAMILY SSF161098 275 538 1.96E-35 T 11-10-2018 IPR035906 MetI-like superfamily AL538_12225 ab151eb15209784bcd43c3c1d847d0a8 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.6E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_12225 ab151eb15209784bcd43c3c1d847d0a8 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.4E-76 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AL538_01240 f9dbf4f774367be3fbcbdfac563befa7 383 Pfam PF12698 ABC-2 family transporter protein 20 367 2.5E-40 T 11-10-2018 AL538_13360 d95e72d09070779301017c81c2f2547b 197 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 194 23.387 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL538_13360 d95e72d09070779301017c81c2f2547b 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 191 2.4E-31 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 AL538_12625 6f5e5df79bb044670c49a2e10b8a2cd5 81 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 10 60 7.3E-24 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AL538_12625 6f5e5df79bb044670c49a2e10b8a2cd5 81 Gene3D G3DSA:1.10.238.160 11 69 3.8E-5 T 11-10-2018 AL538_05055 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_05055 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_05055 148cc96bc3937e1664149bd16074beae 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_05055 148cc96bc3937e1664149bd16074beae 89 PIRSF PIRSF004669 1 89 4.5E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_05055 148cc96bc3937e1664149bd16074beae 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_05055 148cc96bc3937e1664149bd16074beae 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.6E-32 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL538_19110 88ac948fbcde0822d2d1f5e6d1c6872e 234 Pfam PF00194 Eukaryotic-type carbonic anhydrase 20 232 1.5E-46 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL538_19110 88ac948fbcde0822d2d1f5e6d1c6872e 234 SMART SM01057 21 233 2.5E-86 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain AL538_19110 88ac948fbcde0822d2d1f5e6d1c6872e 234 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 107 123 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AL538_19110 88ac948fbcde0822d2d1f5e6d1c6872e 234 SUPERFAMILY SSF51069 20 232 1.43E-71 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL538_19110 88ac948fbcde0822d2d1f5e6d1c6872e 234 Gene3D G3DSA:3.10.200.10 20 234 8.1E-76 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 SUPERFAMILY SSF55031 177 289 1.01E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 SUPERFAMILY SSF53187 7 367 2.09E-58 T 11-10-2018 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 Gene3D G3DSA:3.30.70.360 176 287 4.1E-112 T 11-10-2018 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 4.6E-158 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 2.5E-17 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 Gene3D G3DSA:3.40.630.10 16 362 4.1E-112 T 11-10-2018 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.2E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 PIRSF PIRSF001123 98 183 1.5E-4 T 11-10-2018 IPR008007 Peptidase M42 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 PIRSF PIRSF001123 6 105 0.017 T 11-10-2018 IPR008007 Peptidase M42 AL538_01675 6b1c4d702047f12002a352e50c37dee0 368 PIRSF PIRSF001123 231 368 1.1E-4 T 11-10-2018 IPR008007 Peptidase M42 AL538_17300 4551fa352f68e955786eac8a5a8b7d71 483 Pfam PF07603 Protein of unknown function (DUF1566) 291 424 7.3E-11 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AL538_27255 0c89e6c688feaa0eb113f91e7adcbb67 297 Pfam PF10124 Mu-like prophage major head subunit gpT 9 296 9.2E-120 T 11-10-2018 IPR018774 Bacteriophage Mu, GpT AL538_19070 88add40c17a593af58113c736368cb6f 293 SUPERFAMILY SSF51658 3 284 2.36E-55 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_19070 88add40c17a593af58113c736368cb6f 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 1.2E-100 T 11-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 AL538_19070 88add40c17a593af58113c736368cb6f 293 Gene3D G3DSA:3.20.20.150 2 287 1.7E-70 T 11-10-2018 AL538_19070 88add40c17a593af58113c736368cb6f 293 Pfam PF01261 Xylose isomerase-like TIM barrel 29 238 5.6E-34 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 138 2.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 Gene3D G3DSA:2.170.130.10 42 149 1.6E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 6.2E-85 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 SUPERFAMILY SSF56935 25 668 8.24E-88 T 11-10-2018 AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 Pfam PF00593 TonB dependent receptor 238 666 2.4E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_25665 053fe2b0156ffd3a7002e1e370b5ec42 668 Gene3D G3DSA:2.40.170.20 151 668 1.2E-107 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_24285 b58393f389c7826c4f0a4a1628c9edec 103 SUPERFAMILY SSF55159 3 99 4.84E-27 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 AL538_24285 b58393f389c7826c4f0a4a1628c9edec 103 Gene3D G3DSA:3.30.780.10 23 103 2.4E-33 T 11-10-2018 AL538_24285 b58393f389c7826c4f0a4a1628c9edec 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.6E-19 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AL538_24285 b58393f389c7826c4f0a4a1628c9edec 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 3.5E-39 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL538_24285 b58393f389c7826c4f0a4a1628c9edec 103 PIRSF PIRSF037511 1 103 3.9E-33 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SUPERFAMILY SSF47384 452 518 5.89E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SMART SM00448 721 831 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 6.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 680 6.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 6.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 6.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Pfam PF00072 Response regulator receiver domain 723 831 1.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SUPERFAMILY SSF52172 721 837 1.71E-29 T 11-10-2018 IPR011006 CheY-like superfamily AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SMART SM00388 461 530 7.2E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 1.6E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SMART SM00387 574 683 1.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Gene3D G3DSA:3.40.50.2300 714 848 4.7E-32 T 11-10-2018 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Gene3D G3DSA:3.30.565.10 534 687 8.6E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 6.0E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 Gene3D G3DSA:1.10.287.130 425 526 6.7E-6 T 11-10-2018 AL538_03410 bd095aa36f96b1443e4a31a43da55913 849 SUPERFAMILY SSF55874 531 683 1.44E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_04390 39ea88d805e55f3ccdc916c54b6021a9 52 Pfam PF01848 Hok/gef family 7 44 3.9E-15 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AL538_04390 39ea88d805e55f3ccdc916c54b6021a9 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 43 7.0E-5 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AL538_04390 39ea88d805e55f3ccdc916c54b6021a9 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 2.6E-7 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AL538_04390 39ea88d805e55f3ccdc916c54b6021a9 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 2.6E-7 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 AL538_22120 9714da07092f97a8200283acac9d3bbd 466 Gene3D G3DSA:3.40.50.720 141 264 2.8E-9 T 11-10-2018 AL538_22120 9714da07092f97a8200283acac9d3bbd 466 Pfam PF13727 CoA-binding domain 66 240 1.0E-38 T 11-10-2018 AL538_22120 9714da07092f97a8200283acac9d3bbd 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 466 9.2E-152 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL538_22120 9714da07092f97a8200283acac9d3bbd 466 Pfam PF02397 Bacterial sugar transferase 276 458 2.5E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase AL538_22120 9714da07092f97a8200283acac9d3bbd 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 23 466 8.6E-169 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AL538_25690 a8b6fc5ca707535a55792ef4060fca01 311 SUPERFAMILY SSF81345 4 306 1.44E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_25690 a8b6fc5ca707535a55792ef4060fca01 311 Gene3D G3DSA:1.10.3470.10 1 311 6.5E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_25690 a8b6fc5ca707535a55792ef4060fca01 311 Pfam PF01032 FecCD transport family 8 306 1.4E-63 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_23595 cb67ab4242aa4e46367c52dd0007d630 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 4.3E-48 T 11-10-2018 IPR004626 RarD protein GO:0005887 AL538_23595 cb67ab4242aa4e46367c52dd0007d630 301 Pfam PF00892 EamA-like transporter family 7 141 1.2E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_23595 cb67ab4242aa4e46367c52dd0007d630 301 Pfam PF00892 EamA-like transporter family 151 283 1.3E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_23595 cb67ab4242aa4e46367c52dd0007d630 301 SUPERFAMILY SSF103481 190 283 2.35E-7 T 11-10-2018 AL538_23595 cb67ab4242aa4e46367c52dd0007d630 301 SUPERFAMILY SSF103481 48 143 7.98E-11 T 11-10-2018 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 5.0E-29 T 11-10-2018 IPR001107 Band 7 domain AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 TIGRFAM TIGR01933 hflK: HflK protein 90 350 2.4E-121 T 11-10-2018 IPR010201 HflK GO:0016021 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 SMART SM00244 88 248 9.6E-52 T 11-10-2018 IPR001107 Band 7 domain AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 5.0E-14 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 PRINTS PR00721 Stomatin signature 95 117 2.0E-6 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 PRINTS PR00721 Stomatin signature 198 221 2.0E-6 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 PRINTS PR00721 Stomatin signature 142 163 2.0E-6 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 Gene3D G3DSA:3.30.479.30 118 250 1.9E-22 T 11-10-2018 AL538_08085 ae7f3826785b690188dd7f24b527e03d 400 SUPERFAMILY SSF117892 125 253 8.5E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AL538_00020 38729b24e9570acaa718eccea983f05e 229 Gene3D G3DSA:3.40.50.300 5 197 4.5E-24 T 11-10-2018 AL538_00020 38729b24e9570acaa718eccea983f05e 229 SUPERFAMILY SSF52540 24 205 5.94E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 5.1E-29 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.7E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 PIRSF PIRSF004669 1 89 3.7E-27 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.8E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.8E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_21350 fcc31a5d201dc2ab332c60b6c54f73a7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.8E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_14300 c33c44d49c77779ade3ac51353bd3734 404 Pfam PF00155 Aminotransferase class I and II 61 393 1.4E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_14300 c33c44d49c77779ade3ac51353bd3734 404 Gene3D G3DSA:3.90.1150.10 21 398 1.4E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_14300 c33c44d49c77779ade3ac51353bd3734 404 Gene3D G3DSA:3.40.640.10 53 294 1.4E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_14300 c33c44d49c77779ade3ac51353bd3734 404 SUPERFAMILY SSF53383 5 399 1.9E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_23980 2aeaa544a91f60066acc4f55fb2a0914 212 Pfam PF07947 YhhN family 24 204 2.1E-35 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AL538_15990 36569d8234223d9e401c55cbb373ed86 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.9E-34 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL538_15990 36569d8234223d9e401c55cbb373ed86 77 Pfam PF06667 Phage shock protein B 3 74 6.3E-31 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AL538_14425 b8319f17bc66b3fa34c7387f38e18e2a 364 Gene3D G3DSA:3.40.50.1100 51 157 3.3E-68 T 11-10-2018 AL538_14425 b8319f17bc66b3fa34c7387f38e18e2a 364 Gene3D G3DSA:3.40.50.1100 25 324 3.3E-68 T 11-10-2018 AL538_14425 b8319f17bc66b3fa34c7387f38e18e2a 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 32 316 1.7E-41 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AL538_14425 b8319f17bc66b3fa34c7387f38e18e2a 364 SUPERFAMILY SSF53686 23 336 2.1E-71 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL538_06120 24552fac059755bb4834f39ea4eb05d6 177 PIRSF PIRSF025550 3 176 5.0E-87 T 11-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AL538_06120 24552fac059755bb4834f39ea4eb05d6 177 SUPERFAMILY SSF55718 46 141 1.55E-20 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL538_06120 24552fac059755bb4834f39ea4eb05d6 177 Gene3D G3DSA:3.30.1050.10 14 141 2.0E-7 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL538_06120 24552fac059755bb4834f39ea4eb05d6 177 Pfam PF02036 SCP-2 sterol transfer family 44 136 5.0E-19 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AL538_26405 f2501096c74d1d679a561c2284a46252 194 SUPERFAMILY SSF52218 1 192 9.94E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_26405 f2501096c74d1d679a561c2284a46252 194 Pfam PF02525 Flavodoxin-like fold 3 187 1.7E-35 T 11-10-2018 IPR003680 Flavodoxin-like fold AL538_26405 f2501096c74d1d679a561c2284a46252 194 Gene3D G3DSA:3.40.50.360 1 194 6.6E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 Pfam PF03831 PhnA domain 43 111 1.4E-26 T 11-10-2018 IPR013988 PhnA protein, C-terminal AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 Gene3D G3DSA:2.30.30.40 41 111 1.6E-27 T 11-10-2018 AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 SUPERFAMILY SSF57783 1 37 7.74E-14 T 11-10-2018 AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 SUPERFAMILY SSF82057 37 111 1.37E-24 T 11-10-2018 AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 1.6E-14 T 11-10-2018 IPR013987 PhnA protein, N-terminal AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 3.1E-40 T 11-10-2018 IPR004624 PhnA protein AL538_15340 dd59f3bb06da82041d87fe6eca0ee20a 111 Gene3D G3DSA:2.20.25.10 1 40 9.7E-18 T 11-10-2018 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 Gene3D G3DSA:1.20.1740.10 1 435 5.7E-62 T 11-10-2018 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 4.6E-126 T 11-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 1.9E-204 T 11-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 PIRSF PIRSF006060 1 432 5.8E-53 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 Pfam PF13520 Amino acid permease 9 414 5.7E-47 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_18475 c9a316a996cea4e8892296c4d0628385 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.557 T 11-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 Pfam PF12019 Type II transport protein GspH 55 150 3.0E-7 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 PIRSF PIRSF024622 1 185 2.0E-86 T 11-10-2018 IPR016824 Tfp pilus assembly protein FimT AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 SUPERFAMILY SSF54523 19 161 1.41E-15 T 11-10-2018 AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 7.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 38 1.7E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_12745 2caa54b5d6a8dc7382d88da2e6f4d5c1 185 Gene3D G3DSA:3.30.700.10 19 143 4.3E-9 T 11-10-2018 AL538_15195 0d79d94850db72f17cd837d660006238 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 6.9E-24 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_15195 0d79d94850db72f17cd837d660006238 152 SUPERFAMILY SSF69635 1 135 2.55E-34 T 11-10-2018 AL538_15195 0d79d94850db72f17cd837d660006238 152 Gene3D G3DSA:3.30.1460.10 1 131 4.8E-22 T 11-10-2018 AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 Gene3D G3DSA:3.40.50.2300 1 124 1.0E-37 T 11-10-2018 AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.1E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 Gene3D G3DSA:1.10.10.10 126 222 8.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 SUPERFAMILY SSF52172 1 164 7.68E-39 T 11-10-2018 IPR011006 CheY-like superfamily AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 Pfam PF00072 Response regulator receiver domain 3 113 1.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 SMART SM00448 1 113 6.0E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_25280 f43a3f05409d8624f80f8fc27d6bdbf6 222 SMART SM00862 146 220 2.4E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_24450 60388266a259032f4b4db3eeb82ff0f4 139 Pfam PF04143 Sulphur transport 3 127 9.2E-7 T 11-10-2018 IPR007272 Sulphur transport domain AL538_16495 9b0cba1b0dd6d2264d1278530ae1537e 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 7.3E-18 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 AL538_16495 9b0cba1b0dd6d2264d1278530ae1537e 403 SMART SM00471 161 297 7.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain AL538_16495 9b0cba1b0dd6d2264d1278530ae1537e 403 SUPERFAMILY SSF109604 156 327 3.38E-32 T 11-10-2018 AL538_16495 9b0cba1b0dd6d2264d1278530ae1537e 403 Pfam PF01966 HD domain 166 290 5.2E-13 T 11-10-2018 IPR006674 HD domain AL538_16495 9b0cba1b0dd6d2264d1278530ae1537e 403 Gene3D G3DSA:1.10.3210.10 11 328 9.2E-70 T 11-10-2018 AL538_06915 ee74c31a5e2c96691439d8ad120bc921 160 Gene3D G3DSA:3.90.960.10 5 157 5.3E-24 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_06915 ee74c31a5e2c96691439d8ad120bc921 160 SUPERFAMILY SSF55826 7 150 5.1E-31 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_06915 ee74c31a5e2c96691439d8ad120bc921 160 Pfam PF04073 Aminoacyl-tRNA editing domain 38 148 2.5E-18 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 SUPERFAMILY SSF52540 545 722 7.97E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 528 727 7.3E-45 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 Pfam PF13807 G-rich domain on putative tyrosine kinase 401 472 1.8E-9 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 Pfam PF02706 Chain length determinant protein 28 112 2.7E-10 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 Gene3D G3DSA:3.40.50.300 469 731 1.7E-67 T 11-10-2018 AL538_22105 e14caaa6054c5f1f4698c15690db4f69 731 Pfam PF13614 AAA domain 557 682 9.7E-14 T 11-10-2018 IPR025669 AAA domain AL538_18655 b7f6cb523a69f570ab8ecca81e4b9493 495 Gene3D G3DSA:1.20.1250.20 259 494 1.5E-12 T 11-10-2018 AL538_18655 b7f6cb523a69f570ab8ecca81e4b9493 495 Gene3D G3DSA:1.20.1720.10 14 215 1.0E-45 T 11-10-2018 AL538_18655 b7f6cb523a69f570ab8ecca81e4b9493 495 Pfam PF07690 Major Facilitator Superfamily 17 408 8.4E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_18655 b7f6cb523a69f570ab8ecca81e4b9493 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 1.8E-108 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AL538_18655 b7f6cb523a69f570ab8ecca81e4b9493 495 SUPERFAMILY SSF103473 11 491 1.02E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_09495 29d13c299cf0c62fb5b4850ab793cf0b 88 Gene3D G3DSA:1.10.1580.20 1 88 2.2E-43 T 11-10-2018 IPR038134 YihD-like superfamily AL538_09495 29d13c299cf0c62fb5b4850ab793cf0b 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.1E-45 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AL538_09495 29d13c299cf0c62fb5b4850ab793cf0b 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 8.0E-37 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 AL538_25595 8c3b4b3b71ef43a2f73902fcde6b40c3 165 Hamap MF_00269 Thiol peroxidase [tpx]. 2 164 36.694 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 AL538_25595 8c3b4b3b71ef43a2f73902fcde6b40c3 165 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 AL538_25595 8c3b4b3b71ef43a2f73902fcde6b40c3 165 Pfam PF08534 Redoxin 18 159 4.8E-27 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_25595 8c3b4b3b71ef43a2f73902fcde6b40c3 165 SUPERFAMILY SSF52833 3 161 2.09E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25595 8c3b4b3b71ef43a2f73902fcde6b40c3 165 Gene3D G3DSA:3.40.30.10 1 165 4.0E-46 T 11-10-2018 AL538_10205 dbd52b2bbefe9a4d112ea5fe60f72b2d 182 Pfam PF13521 AAA domain 4 164 4.0E-38 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain AL538_10205 dbd52b2bbefe9a4d112ea5fe60f72b2d 182 Gene3D G3DSA:3.40.50.300 2 168 5.2E-7 T 11-10-2018 AL538_10205 dbd52b2bbefe9a4d112ea5fe60f72b2d 182 SUPERFAMILY SSF52540 4 172 5.7E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08490 350e6da690a7c045916e889d4d46b39d 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.597 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 Gene3D G3DSA:3.20.20.70 15 258 2.2E-77 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 323 1.8E-108 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 PIRSF PIRSF006621 9 330 2.4E-100 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 SUPERFAMILY SSF51395 19 328 5.31E-89 T 11-10-2018 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 Gene3D G3DSA:1.10.1200.80 260 331 2.1E-8 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 7.0E-131 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AL538_08490 350e6da690a7c045916e889d4d46b39d 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AL538_01765 f8e906f1f36cb68370df7683e1ad5841 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 46.634 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_01765 f8e906f1f36cb68370df7683e1ad5841 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 233 3.8E-94 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AL538_01765 f8e906f1f36cb68370df7683e1ad5841 235 SUPERFAMILY SSF53167 2 233 3.01E-84 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_01765 f8e906f1f36cb68370df7683e1ad5841 235 Gene3D G3DSA:3.40.50.1580 2 234 2.0E-69 T 11-10-2018 AL538_01765 f8e906f1f36cb68370df7683e1ad5841 235 Pfam PF01048 Phosphorylase superfamily 16 218 1.1E-35 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SMART SM00091 359 425 7.1E-9 T 11-10-2018 IPR000014 PAS domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SMART SM00091 247 313 0.24 T 11-10-2018 IPR000014 PAS domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 1.5E-12 T 11-10-2018 IPR000014 PAS domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Pfam PF00672 HAMP domain 180 227 8.9E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Gene3D G3DSA:3.30.450.20 259 355 4.2E-7 T 11-10-2018 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Pfam PF17152 Periplasmic sensor domain 38 142 5.2E-10 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Pfam PF00989 PAS fold 363 409 5.3E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SUPERFAMILY SSF55785 347 453 7.85E-14 T 11-10-2018 IPR035965 PAS domain superfamily AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Gene3D G3DSA:1.10.287.130 178 258 1.6E-8 T 11-10-2018 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Gene3D G3DSA:3.30.70.270 477 645 1.1E-54 T 11-10-2018 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Gene3D G3DSA:3.30.450.20 356 476 4.9E-15 T 11-10-2018 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SUPERFAMILY SSF55073 489 642 1.94E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SUPERFAMILY SSF55785 234 349 1.24E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SMART SM00304 180 233 2.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SMART SM00267 473 644 4.1E-57 T 11-10-2018 IPR000160 GGDEF domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 2.8E-46 T 11-10-2018 IPR000160 GGDEF domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 1.3E-43 T 11-10-2018 IPR000160 GGDEF domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 Pfam PF13188 PAS domain 250 289 4.6E-5 T 11-10-2018 IPR000014 PAS domain AL538_24240 3dadaace4f9891cd6a8a80167ca3f832 652 SUPERFAMILY SSF158472 180 229 1.83E-7 T 11-10-2018 AL538_15540 69064bb74875b9b120dff0492481d6bd 721 Gene3D G3DSA:2.70.98.70 351 717 1.3E-95 T 11-10-2018 AL538_15540 69064bb74875b9b120dff0492481d6bd 721 Pfam PF05426 Alginate lyase 47 272 1.6E-12 T 11-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AL538_15540 69064bb74875b9b120dff0492481d6bd 721 Gene3D G3DSA:1.50.10.100 5 343 4.2E-91 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_15540 69064bb74875b9b120dff0492481d6bd 721 SUPERFAMILY SSF48230 44 295 3.75E-43 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AL538_15540 69064bb74875b9b120dff0492481d6bd 721 Pfam PF07940 Heparinase II/III-like protein 367 626 1.1E-22 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 AL538_01560 fab28391914befd5185f59404171ab74 226 Pfam PF12431 Transcriptional regulator 133 161 4.1E-9 T 11-10-2018 IPR028141 Transcriptional regulator AL538_01560 fab28391914befd5185f59404171ab74 226 SUPERFAMILY SSF52172 5 142 9.11E-31 T 11-10-2018 IPR011006 CheY-like superfamily AL538_01560 fab28391914befd5185f59404171ab74 226 Pfam PF00072 Response regulator receiver domain 6 117 8.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01560 fab28391914befd5185f59404171ab74 226 SMART SM00448 4 117 1.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_01560 fab28391914befd5185f59404171ab74 226 PIRSF PIRSF006171 2 226 1.0E-79 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 AL538_01560 fab28391914befd5185f59404171ab74 226 Gene3D G3DSA:3.40.50.2300 3 147 4.5E-25 T 11-10-2018 AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.9E-35 T 11-10-2018 AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Gene3D G3DSA:3.40.350.10 147 292 1.1E-24 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 SUPERFAMILY SSF53092 6 144 4.71E-21 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 SUPERFAMILY SSF55920 303 559 3.93E-56 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Pfam PF16188 C-terminal region of peptidase_M24 534 592 3.6E-22 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Pfam PF00557 Metallopeptidase family M24 309 524 1.8E-43 T 11-10-2018 IPR000994 Peptidase M24 AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Gene3D G3DSA:3.40.350.10 1 146 1.5E-35 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 4.2E-20 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AL538_09315 0c8d261ccaa0d39edb4629bac5ca2834 596 Gene3D G3DSA:3.90.230.10 300 593 9.6E-95 T 11-10-2018 AL538_15115 92e111b5a724ce7a4f89634a918eb412 332 Pfam PF16806 Antiactivator protein ExsD 58 315 1.1E-70 T 11-10-2018 IPR031835 Antiactivator protein ExsD AL538_16095 4a568dfdff0760574e1c70ca1c892cba 225 Pfam PF09335 SNARE associated Golgi protein 62 178 1.6E-24 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_11175 a1068d2bcc4984e21bff70fe7680ab31 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 1.6E-37 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE AL538_22830 a68451072b124c4290e7139f9bc1f2a0 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_22830 a68451072b124c4290e7139f9bc1f2a0 237 Pfam PF00005 ABC transporter 24 172 1.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_22830 a68451072b124c4290e7139f9bc1f2a0 237 SMART SM00382 32 220 1.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_22830 a68451072b124c4290e7139f9bc1f2a0 237 Gene3D G3DSA:3.40.50.300 1 236 4.8E-72 T 11-10-2018 AL538_22830 a68451072b124c4290e7139f9bc1f2a0 237 SUPERFAMILY SSF52540 3 224 6.25E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 Gene3D G3DSA:1.10.3720.10 283 527 7.3E-29 T 11-10-2018 IPR035906 MetI-like superfamily AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 Gene3D G3DSA:1.10.3720.10 6 263 3.9E-42 T 11-10-2018 IPR035906 MetI-like superfamily AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 SUPERFAMILY SSF161098 280 521 1.07E-32 T 11-10-2018 IPR035906 MetI-like superfamily AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 364 513 3.5E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 2.8E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 9.0E-161 T 11-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 AL538_11110 eb9ff91dca8782bc5f92f58b07dc2a31 528 SUPERFAMILY SSF161098 18 257 2.22E-41 T 11-10-2018 IPR035906 MetI-like superfamily AL538_02995 b8d927696d7b46fb8a05d35813608826 417 Pfam PF03222 Tryptophan/tyrosine permease family 29 382 7.5E-18 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AL538_08220 6a8140735beb83de2c5db23264916de6 144 SMART SM00450 40 138 1.2E-21 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_08220 6a8140735beb83de2c5db23264916de6 144 Pfam PF00581 Rhodanese-like domain 44 135 1.4E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AL538_08220 6a8140735beb83de2c5db23264916de6 144 Gene3D G3DSA:3.40.250.10 22 143 1.3E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_08220 6a8140735beb83de2c5db23264916de6 144 SUPERFAMILY SSF52821 15 143 3.67E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AL538_18200 9d16b96e6337d3f39b0104751c8be35b 290 Pfam PF01734 Patatin-like phospholipase 7 170 1.1E-13 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL538_18200 9d16b96e6337d3f39b0104751c8be35b 290 SUPERFAMILY SSF52151 4 242 1.91E-32 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL538_18200 9d16b96e6337d3f39b0104751c8be35b 290 Gene3D G3DSA:3.40.1090.10 2 96 6.2E-10 T 11-10-2018 AL538_01300 6f35a13781a5380f707c175090fef0ca 109 SUPERFAMILY SSF46626 10 104 1.12E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01300 6f35a13781a5380f707c175090fef0ca 109 Gene3D G3DSA:1.10.760.10 15 105 6.9E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01300 6f35a13781a5380f707c175090fef0ca 109 Pfam PF00034 Cytochrome c 23 104 2.2E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_09260 471cbe586bec50787fb6e36c22690222 219 PIRSF PIRSF006324 1 214 3.8E-49 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_09260 471cbe586bec50787fb6e36c22690222 219 Pfam PF01810 LysE type translocator 16 212 1.8E-36 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 Pfam PF00239 Resolvase, N terminal domain 4 140 1.6E-33 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 Gene3D G3DSA:3.40.50.1390 3 128 1.2E-34 T 11-10-2018 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 SMART SM00857 3 140 1.3E-38 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 Pfam PF02796 Helix-turn-helix domain of resolvase 142 183 1.8E-5 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AL538_08330 95faa19c57d516f1a9673d1119218ea0 187 SUPERFAMILY SSF53041 3 140 8.11E-36 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 AL538_24150 9003bcf9d0320d60b1a96e811190bed6 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 3.6E-38 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AL538_24150 9003bcf9d0320d60b1a96e811190bed6 144 Pfam PF03061 Thioesterase superfamily 52 128 2.4E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL538_24150 9003bcf9d0320d60b1a96e811190bed6 144 SUPERFAMILY SSF54637 1 137 4.07E-30 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_24150 9003bcf9d0320d60b1a96e811190bed6 144 Gene3D G3DSA:3.10.129.10 1 144 1.4E-56 T 11-10-2018 AL538_04290 06c627fdbaaf69b4696700a0a6d1e7d3 162 Pfam PF04463 Protein of unknown function (DUF523) 4 148 3.4E-39 T 11-10-2018 IPR007553 Domain of unknown function DUF523 AL538_08200 b3171744a49aadd93c55681337770eec 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 468 4.0E-81 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_08200 b3171744a49aadd93c55681337770eec 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 464 5.9E-48 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 4.7E-64 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.05 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 SUPERFAMILY SSF52402 6 209 2.33E-74 T 11-10-2018 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 PIRSF PIRSF002936 1 302 2.8E-156 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.9E-163 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AL538_11005 409f177b8d2c5f86e1d82f246e482467 302 Gene3D G3DSA:3.40.50.620 7 212 6.9E-66 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_17770 1255b59b1db5cdae459eb098974fa105 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 8 595 2.5E-86 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL538_17770 1255b59b1db5cdae459eb098974fa105 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 2.6E-141 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL538_17770 1255b59b1db5cdae459eb098974fa105 901 SUPERFAMILY SSF48208 313 887 5.67E-28 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_15345 c677698726fc9fd588d6fd71e899f105 278 SUPERFAMILY SSF53807 22 277 5.89E-43 T 11-10-2018 AL538_15345 c677698726fc9fd588d6fd71e899f105 278 Pfam PF01497 Periplasmic binding protein 27 253 7.9E-33 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_15345 c677698726fc9fd588d6fd71e899f105 278 Gene3D G3DSA:3.40.50.1980 20 138 2.5E-29 T 11-10-2018 AL538_15345 c677698726fc9fd588d6fd71e899f105 278 Gene3D G3DSA:3.40.50.1980 139 278 1.1E-34 T 11-10-2018 AL538_26430 f963252edb9b08352a29f2ad517a3510 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 45 175 1.3E-38 T 11-10-2018 IPR005247 YbhB/YbcL AL538_26430 f963252edb9b08352a29f2ad517a3510 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.6E-34 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AL538_26430 f963252edb9b08352a29f2ad517a3510 177 SUPERFAMILY SSF49777 22 177 1.7E-47 T 11-10-2018 IPR036610 PEBP-like superfamily AL538_26430 f963252edb9b08352a29f2ad517a3510 177 Gene3D G3DSA:3.90.280.10 12 177 6.9E-51 T 11-10-2018 IPR036610 PEBP-like superfamily AL538_23460 d24779d67d05d3b501d78931fc4dcfda 290 Gene3D G3DSA:2.70.98.10 1 289 1.8E-53 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_23460 d24779d67d05d3b501d78931fc4dcfda 290 Pfam PF01263 Aldose 1-epimerase 4 284 6.7E-29 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AL538_23460 d24779d67d05d3b501d78931fc4dcfda 290 SUPERFAMILY SSF74650 3 289 5.97E-43 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 AL538_24470 5ea17d5e910c78b0a2cf683027b6957b 408 Pfam PF04966 Carbohydrate-selective porin, OprB family 141 406 2.5E-18 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AL538_24470 5ea17d5e910c78b0a2cf683027b6957b 408 Gene3D G3DSA:2.40.160.180 125 407 2.6E-28 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AL538_17755 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 AL538_17755 cf8b3d9e8fe4628289de4ecc5c6b5426 466 SUPERFAMILY SSF52794 372 465 2.75E-29 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_17755 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_17755 cf8b3d9e8fe4628289de4ecc5c6b5426 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 11-10-2018 AL538_17755 cf8b3d9e8fe4628289de4ecc5c6b5426 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 341 4.4E-76 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AL538_18580 bc652922caf937766011a4d5269e105e 163 SUPERFAMILY SSF54593 1 155 4.43E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_18580 bc652922caf937766011a4d5269e105e 163 Gene3D G3DSA:3.10.180.10 1 161 2.5E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_18580 bc652922caf937766011a4d5269e105e 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 149 8.8E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_18580 bc652922caf937766011a4d5269e105e 163 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AL538_20215 93bedec4f56a09c633d80796e2bab5e2 213 Pfam PF01292 Prokaryotic cytochrome b561 4 170 2.3E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL538_20215 93bedec4f56a09c633d80796e2bab5e2 213 Gene3D G3DSA:1.20.950.20 1 158 1.7E-12 T 11-10-2018 AL538_20215 93bedec4f56a09c633d80796e2bab5e2 213 SUPERFAMILY SSF81342 2 173 2.22E-33 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_25570 23a7b2e14d178e4b4fef867645ff4d02 85 Pfam PF01381 Helix-turn-helix 13 64 6.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_25570 23a7b2e14d178e4b4fef867645ff4d02 85 Gene3D G3DSA:1.10.260.40 1 85 2.3E-14 T 11-10-2018 AL538_25570 23a7b2e14d178e4b4fef867645ff4d02 85 SMART SM00530 12 67 1.1E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_25570 23a7b2e14d178e4b4fef867645ff4d02 85 SUPERFAMILY SSF47413 6 68 8.31E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_20285 8cbf5ab408d35976752b2884350b6987 222 Gene3D G3DSA:1.20.910.10 2 221 9.6E-63 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL538_20285 8cbf5ab408d35976752b2884350b6987 222 Pfam PF03070 TENA/THI-4/PQQC family 12 217 6.4E-44 T 11-10-2018 IPR004305 Thiaminase-2/PQQC AL538_20285 8cbf5ab408d35976752b2884350b6987 222 SUPERFAMILY SSF48613 3 216 3.78E-67 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AL538_20285 8cbf5ab408d35976752b2884350b6987 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 13 216 1.4E-39 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 SUPERFAMILY SSF56349 113 303 5.59E-57 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 SUPERFAMILY SSF47823 11 107 1.22E-33 T 11-10-2018 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.171 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.262 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Gene3D G3DSA:1.10.150.130 10 105 2.9E-21 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Pfam PF00589 Phage integrase family 120 291 7.3E-53 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Gene3D G3DSA:1.10.443.10 118 299 1.3E-72 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 2.4E-18 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AL538_11890 7bf1c202335d847a579837c9f611fadc 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 1.9E-114 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 Pfam PF00326 Prolyl oligopeptidase family 504 719 1.7E-69 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 Gene3D G3DSA:2.130.10.120 111 445 1.1E-250 T 11-10-2018 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 4.2E-97 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 Gene3D G3DSA:3.40.50.1820 60 713 1.1E-250 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 SUPERFAMILY SSF50993 39 451 1.41E-94 T 11-10-2018 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 SUPERFAMILY SSF53474 455 699 4.79E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_20555 64d5b4668507e7e68bbb1cc2a468df8d 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 1.5E-51 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AL538_09680 49ee51ae3b43d4bcbbb206416f72746d 223 Gene3D G3DSA:1.10.3720.10 1 222 6.8E-53 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09680 49ee51ae3b43d4bcbbb206416f72746d 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 4.5E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_09680 49ee51ae3b43d4bcbbb206416f72746d 223 SUPERFAMILY SSF161098 13 203 3.27E-43 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09680 49ee51ae3b43d4bcbbb206416f72746d 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.5E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.409 T 11-10-2018 IPR023006 Uncharacterised protein family UPF0225 AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 SUPERFAMILY SSF54427 28 128 1.8E-34 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 SUPERFAMILY SSF103642 150 170 3.6E-8 T 11-10-2018 AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 Gene3D G3DSA:3.10.450.50 1 170 1.3E-51 T 11-10-2018 AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 Pfam PF02810 SEC-C motif 153 170 5.0E-10 T 11-10-2018 IPR004027 SEC-C motif AL538_15840 20a3c59990fe9a727f1f766950a82d5d 170 Pfam PF02810 SEC-C motif 4 18 4.6E-6 T 11-10-2018 IPR004027 SEC-C motif AL538_14545 b6b7abfbaab42c98490c43502658be6b 293 Pfam PF01636 Phosphotransferase enzyme family 30 230 2.2E-10 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AL538_14545 b6b7abfbaab42c98490c43502658be6b 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 2.5E-96 T 11-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 AL538_14545 b6b7abfbaab42c98490c43502658be6b 293 Gene3D G3DSA:3.90.1200.10 117 288 4.6E-13 T 11-10-2018 AL538_14545 b6b7abfbaab42c98490c43502658be6b 293 SUPERFAMILY SSF56112 24 273 8.16E-37 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 Gene3D G3DSA:1.10.10.60 187 241 2.7E-21 T 11-10-2018 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 Pfam PF12833 Helix-turn-helix domain 161 240 4.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 SUPERFAMILY SSF46689 191 240 4.93E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 SUPERFAMILY SSF46689 141 188 2.78E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 Gene3D G3DSA:1.10.10.60 136 186 6.6E-13 T 11-10-2018 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 SMART SM00342 154 238 4.5E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 4.6E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 4.6E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_06015 b07a0d5d7e7d87f49d7731a2649f2126 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_23990 5a7ec92c693602749454f95033e28062 293 Pfam PF12833 Helix-turn-helix domain 215 292 8.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_23990 5a7ec92c693602749454f95033e28062 293 Gene3D G3DSA:1.10.10.60 188 293 1.9E-27 T 11-10-2018 AL538_23990 5a7ec92c693602749454f95033e28062 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AL538_23990 5a7ec92c693602749454f95033e28062 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 2.2E-36 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AL538_23990 5a7ec92c693602749454f95033e28062 293 SUPERFAMILY SSF46689 245 292 3.36E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_23990 5a7ec92c693602749454f95033e28062 293 SUPERFAMILY SSF46689 193 243 7.62E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_23990 5a7ec92c693602749454f95033e28062 293 SMART SM00342 209 292 3.4E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_15470 7ef710b0363901bc4425188b3cd34509 233 Pfam PF06267 Family of unknown function (DUF1028) 2 208 5.3E-44 T 11-10-2018 IPR010430 Protein of unknown function DUF1028 AL538_15470 7ef710b0363901bc4425188b3cd34509 233 SUPERFAMILY SSF56235 1 231 2.08E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_15470 7ef710b0363901bc4425188b3cd34509 233 Gene3D G3DSA:3.60.20.10 1 233 6.1E-51 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_03160 ca916480c187bcec1bcfd98f553d545a 460 PIRSF PIRSF028099 6 460 2.2E-185 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL538_03160 ca916480c187bcec1bcfd98f553d545a 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 2.9E-146 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AL538_03160 ca916480c187bcec1bcfd98f553d545a 460 SUPERFAMILY SSF46626 318 460 8.02E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_03160 ca916480c187bcec1bcfd98f553d545a 460 Gene3D G3DSA:1.10.760.10 311 460 8.8E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_02745 d2861d8b474a06e177dc42db9b0cea44 257 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 217 256 7.8E-12 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AL538_02745 d2861d8b474a06e177dc42db9b0cea44 257 SUPERFAMILY SSF57783 214 255 1.65E-7 T 11-10-2018 AL538_02745 d2861d8b474a06e177dc42db9b0cea44 257 Pfam PF08378 Nuclease-related domain 33 143 6.9E-31 T 11-10-2018 IPR011528 Nuclease-related domain, NERD AL538_02745 d2861d8b474a06e177dc42db9b0cea44 257 Gene3D G3DSA:3.30.65.10 204 257 1.1E-6 T 11-10-2018 AL538_28470 837313ff9c5a00b68a97aadd52a14c23 74 Pfam PF01809 Haemolytic domain 4 71 6.6E-18 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28470 837313ff9c5a00b68a97aadd52a14c23 74 SMART SM01234 2 73 1.8E-10 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28470 837313ff9c5a00b68a97aadd52a14c23 74 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 27 61 3.0E-8 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 SUPERFAMILY SSF141868 521 767 9.29E-68 T 11-10-2018 IPR035919 EAL domain superfamily AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 Gene3D G3DSA:3.30.70.270 334 519 1.2E-46 T 11-10-2018 AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 Pfam PF00563 EAL domain 522 754 5.3E-62 T 11-10-2018 IPR001633 EAL domain AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 9.9E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 SMART SM00267 329 506 2.6E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 8.1E-32 T 11-10-2018 IPR000160 GGDEF domain AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 SUPERFAMILY SSF55073 345 507 2.51E-38 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 SMART SM00052 516 759 2.5E-72 T 11-10-2018 IPR001633 EAL domain AL538_25750 5236af70918df6ce1a2f766bc73e7975 778 Gene3D G3DSA:3.20.20.450 520 776 4.3E-73 T 11-10-2018 IPR035919 EAL domain superfamily AL538_12640 d571d0f814c1e9216c7a2ae2d9ea00b6 180 Pfam PF08747 Domain of unknown function (DUF1788) 97 174 4.7E-10 T 11-10-2018 IPR014858 Protein of unknown function DUF1788 AL538_15930 769e22462e716578338dc16eef0ba1ef 284 SUPERFAMILY SSF52540 4 225 2.47E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15930 769e22462e716578338dc16eef0ba1ef 284 Pfam PF00005 ABC transporter 22 167 4.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_15930 769e22462e716578338dc16eef0ba1ef 284 SMART SM00382 29 217 5.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15930 769e22462e716578338dc16eef0ba1ef 284 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_15930 769e22462e716578338dc16eef0ba1ef 284 Gene3D G3DSA:3.40.50.300 2 239 7.9E-61 T 11-10-2018 AL538_19175 ec95b644823aca095baa685588df25f7 350 Pfam PF00892 EamA-like transporter family 174 329 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_19175 ec95b644823aca095baa685588df25f7 350 Pfam PF00892 EamA-like transporter family 21 149 1.1E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_19175 ec95b644823aca095baa685588df25f7 350 SUPERFAMILY SSF103481 52 150 3.66E-7 T 11-10-2018 AL538_19175 ec95b644823aca095baa685588df25f7 350 SUPERFAMILY SSF103481 256 329 8.63E-10 T 11-10-2018 AL538_11575 a570ade9f288ec849b0f385a477e3876 196 Pfam PF13580 SIS domain 9 144 4.2E-34 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AL538_11575 a570ade9f288ec849b0f385a477e3876 196 SUPERFAMILY SSF53697 1 191 4.85E-56 T 11-10-2018 AL538_11575 a570ade9f288ec849b0f385a477e3876 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.043 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AL538_11575 a570ade9f288ec849b0f385a477e3876 196 Gene3D G3DSA:3.40.50.10490 1 195 5.3E-72 T 11-10-2018 AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 PIRSF PIRSF028788 4 195 1.7E-35 T 11-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 SUPERFAMILY SSF159894 3 102 3.14E-27 T 11-10-2018 AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 Gene3D G3DSA:3.30.1460.30 4 101 9.9E-18 T 11-10-2018 AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.3E-23 T 11-10-2018 IPR007076 TfoX, N-terminal AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 Gene3D G3DSA:1.10.150.20 113 195 3.4E-16 T 11-10-2018 AL538_16315 64b0bce3a7f6eaef3d1787ddecb7e072 195 Pfam PF04994 TfoX C-terminal domain 114 192 4.5E-27 T 11-10-2018 IPR007077 TfoX, C-terminal AL538_01950 7a52bdbd36064d483320ac402e6032c7 268 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 22 261 1.7E-35 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL538_01950 7a52bdbd36064d483320ac402e6032c7 268 Pfam PF02654 Cobalamin-5-phosphate synthase 25 259 1.1E-52 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL538_01950 7a52bdbd36064d483320ac402e6032c7 268 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 268 47.793 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 AL538_04670 f4068cc9296bdca85af73526bb617c23 322 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 292 6.7E-81 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AL538_04670 f4068cc9296bdca85af73526bb617c23 322 SUPERFAMILY SSF53590 1 289 3.79E-91 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AL538_04670 f4068cc9296bdca85af73526bb617c23 322 Gene3D G3DSA:3.90.245.10 1 319 8.6E-103 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like AL538_19740 a8456fae28e0b77d229bd330bbdfa46f 467 PIRSF PIRSF006060 1 467 4.4E-64 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_19740 a8456fae28e0b77d229bd330bbdfa46f 467 Gene3D G3DSA:1.20.1740.10 9 463 1.5E-41 T 11-10-2018 AL538_19740 a8456fae28e0b77d229bd330bbdfa46f 467 Pfam PF13520 Amino acid permease 15 439 1.9E-54 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.709 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Gene3D G3DSA:1.25.40.10 23 146 7.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Gene3D G3DSA:3.40.50.2300 369 597 2.3E-64 T 11-10-2018 AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Gene3D G3DSA:3.40.50.2300 261 596 2.3E-64 T 11-10-2018 AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Gene3D G3DSA:1.25.40.650 149 254 4.6E-17 T 11-10-2018 AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 SUPERFAMILY SSF53822 260 599 2.59E-73 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AL538_11585 eb7b518af6aabf959d1ce70da390d458 603 Pfam PF04348 LppC putative lipoprotein 40 599 4.7E-165 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA AL538_22360 cc8178160d98f755235e0653733caf6c 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 Gene3D G3DSA:3.40.50.720 1 239 1.2E-77 T 11-10-2018 AL538_22360 cc8178160d98f755235e0653733caf6c 239 SUPERFAMILY SSF51735 3 223 1.05E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_22360 cc8178160d98f755235e0653733caf6c 239 Pfam PF00106 short chain dehydrogenase 3 189 1.2E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_06695 2b37727a871b5b5a9e27d0d5021823fb 160 Pfam PF02464 Competence-damaged protein 5 158 4.4E-58 T 11-10-2018 IPR008136 CinA, C-terminal AL538_06695 2b37727a871b5b5a9e27d0d5021823fb 160 SUPERFAMILY SSF142433 5 159 1.05E-55 T 11-10-2018 IPR036653 CinA-like, C-terminal AL538_06695 2b37727a871b5b5a9e27d0d5021823fb 160 Gene3D G3DSA:3.90.950.20 1 160 3.0E-59 T 11-10-2018 IPR036653 CinA-like, C-terminal AL538_06695 2b37727a871b5b5a9e27d0d5021823fb 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 158 4.9E-51 T 11-10-2018 IPR008136 CinA, C-terminal AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 4.1E-79 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.835 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 SUPERFAMILY SSF75217 1 154 1.62E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 PIRSF PIRSF004505 1 155 1.5E-43 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 Gene3D G3DSA:3.40.1280.10 1 156 4.9E-53 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_13075 e4e27e4dbbf4077ea87d008bd838a9bf 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 7.6E-49 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AL538_10405 17f4d213ac12699372559424d1ddb74d 209 Gene3D G3DSA:3.30.1150.10 110 208 1.1E-20 T 11-10-2018 AL538_10405 17f4d213ac12699372559424d1ddb74d 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 133 208 3.9E-12 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AL538_10405 17f4d213ac12699372559424d1ddb74d 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 129 207 2.6E-16 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AL538_10405 17f4d213ac12699372559424d1ddb74d 209 SUPERFAMILY SSF74653 121 206 1.18E-17 T 11-10-2018 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 Pfam PF00849 RNA pseudouridylate synthase 59 203 8.2E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 SUPERFAMILY SSF55120 50 233 6.08E-47 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 94 108 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 63 233 1.4E-59 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 Gene3D G3DSA:3.30.70.1560 123 222 7.9E-41 T 11-10-2018 AL538_14735 1eb1cf6921589682a1857bffdbc8babf 234 Gene3D G3DSA:3.30.70.580 47 122 1.4E-26 T 11-10-2018 AL538_19075 da72cac4c144d3bf54e268e9b266402e 215 Gene3D G3DSA:3.20.20.70 1 215 3.6E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_19075 da72cac4c144d3bf54e268e9b266402e 215 SUPERFAMILY SSF51366 1 214 4.71E-36 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AL538_19075 da72cac4c144d3bf54e268e9b266402e 215 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 199 8.6E-29 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_19075 da72cac4c144d3bf54e268e9b266402e 215 SMART SM00934 5 206 5.8E-26 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AL538_27375 d309b0a218bdfc0e10742b641baff251 282 SUPERFAMILY SSF50182 96 169 5.23E-10 T 11-10-2018 IPR010920 LSM domain superfamily AL538_27375 d309b0a218bdfc0e10742b641baff251 282 Pfam PF00924 Mechanosensitive ion channel 60 183 8.6E-16 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_27205 8958f341a005a2f5033d3bec588552c4 99 ProDom PD283729 GP25 PHAGE SO2675 MEMBRANE MU-LIKE TRANSMEMBRANE HI1498 ECS4966 8 83 5.0E-6 T 11-10-2018 IPR020269 Bacteriophage Mu, Gp25 AL538_27205 8958f341a005a2f5033d3bec588552c4 99 Pfam PF10805 Protein of unknown function (DUF2730) 2 94 5.3E-21 T 11-10-2018 IPR020269 Bacteriophage Mu, Gp25 AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 Gene3D G3DSA:1.20.81.30 259 370 6.5E-28 T 11-10-2018 AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 8.3E-32 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 2.3E-28 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 Gene3D G3DSA:1.20.81.30 58 174 1.6E-29 T 11-10-2018 AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 3.5E-19 T 11-10-2018 IPR003004 GspF/PilC family AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 3.5E-19 T 11-10-2018 IPR003004 GspF/PilC family AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 3.5E-19 T 11-10-2018 IPR003004 GspF/PilC family AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 3.5E-19 T 11-10-2018 IPR003004 GspF/PilC family AL538_06515 0e20c6e44cbed411ecb6cda9489239b5 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 Gene3D G3DSA:3.40.605.10 23 440 1.2E-154 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 Pfam PF00171 Aldehyde dehydrogenase family 34 440 2.5E-95 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 SUPERFAMILY SSF53720 15 441 4.84E-116 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 Gene3D G3DSA:3.40.309.10 221 420 1.2E-154 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 PIRSF PIRSF036492 2 470 1.9E-158 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AL538_23765 7544b5049a8ba34c5735a531e14d5f23 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 Gene3D G3DSA:3.40.50.300 177 456 4.2E-106 T 11-10-2018 AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 SUPERFAMILY SSF48024 18 129 5.49E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.7E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 SUPERFAMILY SSF52540 197 449 3.02E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 Gene3D G3DSA:1.10.860.10 12 176 3.5E-53 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 2.1E-112 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AL538_07715 f0eb71153be8f66779691550a22fcfd1 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 1.6E-174 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 Pfam PF01039 Carboxyl transferase domain 100 240 5.4E-14 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 7.4E-140 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.483 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 SUPERFAMILY SSF52096 25 282 3.73E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_04825 c731625a620eae9c92f023aa0bdbaf76 308 Gene3D G3DSA:3.90.226.10 25 286 5.4E-82 T 11-10-2018 AL538_22560 0155635ebf18be7963d878fa02307e8c 217 Gene3D G3DSA:1.10.10.10 95 175 6.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22560 0155635ebf18be7963d878fa02307e8c 217 Gene3D G3DSA:1.10.10.10 1 90 9.8E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22560 0155635ebf18be7963d878fa02307e8c 217 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 217 35.76 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AL538_22560 0155635ebf18be7963d878fa02307e8c 217 Pfam PF04337 Protein of unknown function, DUF480 5 158 6.0E-66 T 11-10-2018 IPR007432 Protein of unknown function DUF480 AL538_22560 0155635ebf18be7963d878fa02307e8c 217 SUPERFAMILY SSF46785 90 174 9.11E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22560 0155635ebf18be7963d878fa02307e8c 217 SUPERFAMILY SSF46785 2 84 7.07E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_27245 2b46c962d2b88c6c22fb9037226f3447 375 ProSitePatterns PS00018 EF-hand calcium-binding domain. 346 358 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AL538_27245 2b46c962d2b88c6c22fb9037226f3447 375 PIRSF PIRSF016624 4 375 1.3E-90 T 11-10-2018 IPR012106 Protease, Mu phage/prophage I type AL538_27245 2b46c962d2b88c6c22fb9037226f3447 375 Pfam PF10123 Mu-like prophage I protein 35 372 3.9E-87 T 11-10-2018 IPR012106 Protease, Mu phage/prophage I type AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 2.5E-39 T 11-10-2018 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 SUPERFAMILY SSF56784 5 224 4.01E-60 T 11-10-2018 IPR036412 HAD-like superfamily AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 1.2E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 193 1.6E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 Gene3D G3DSA:1.10.150.240 21 94 2.6E-64 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 5.3E-61 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 35.333 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 Gene3D G3DSA:3.40.50.1000 9 216 2.6E-64 T 11-10-2018 IPR023214 HAD superfamily AL538_08040 5fae426b0b6a10cb26a21056199b80ea 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 194 6.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_11435 03337b5319d5351d4b95240aedfb7c7c 203 SMART SM00287 20 86 1.2E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL538_11435 03337b5319d5351d4b95240aedfb7c7c 203 Gene3D G3DSA:2.30.30.40 31 86 7.4E-10 T 11-10-2018 AL538_11435 03337b5319d5351d4b95240aedfb7c7c 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 8.4E-54 T 11-10-2018 IPR016476 SH3 domain protein AL538_11435 03337b5319d5351d4b95240aedfb7c7c 203 Pfam PF08239 Bacterial SH3 domain 33 82 1.2E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type AL538_11435 03337b5319d5351d4b95240aedfb7c7c 203 PIRSF PIRSF006158 1 203 5.1E-71 T 11-10-2018 IPR016476 SH3 domain protein AL538_12100 90636b77ff4704cc7388f672b0ecf661 108 SUPERFAMILY SSF69754 1 103 1.7E-29 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL538_12100 90636b77ff4704cc7388f672b0ecf661 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 5.9E-23 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL538_12100 90636b77ff4704cc7388f672b0ecf661 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 1.3E-30 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AL538_12100 90636b77ff4704cc7388f672b0ecf661 108 Gene3D G3DSA:3.30.160.100 1 105 2.5E-33 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AL538_05495 6f829aa964144b26b5f00c101620db60 255 SUPERFAMILY SSF55120 10 251 1.92E-63 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_05495 6f829aa964144b26b5f00c101620db60 255 Pfam PF00849 RNA pseudouridylate synthase 24 183 1.4E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_05495 6f829aa964144b26b5f00c101620db60 255 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_05495 6f829aa964144b26b5f00c101620db60 255 Gene3D G3DSA:3.30.2350.10 8 237 1.7E-60 T 11-10-2018 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Gene3D G3DSA:3.90.1310.30 87 262 8.8E-45 T 11-10-2018 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 SUPERFAMILY SSF56519 90 262 3.14E-45 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 47 599 44.921 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 95 249 1.0E-19 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Gene3D G3DSA:3.30.450.330 264 588 1.0E-105 T 11-10-2018 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 288 584 3.9E-77 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 Gene3D G3DSA:3.40.710.10 324 506 1.0E-105 T 11-10-2018 AL538_11610 6c4de7d87858b3ed20af07ffe88f4ea8 601 SUPERFAMILY SSF56601 264 595 6.3E-92 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AL538_22285 1f18c03492165a4e40ed66741236c7f3 143 PIRSF PIRSF028777 1 138 3.8E-52 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 AL538_22285 1f18c03492165a4e40ed66741236c7f3 143 Pfam PF03733 Inner membrane component domain 4 54 7.7E-15 T 11-10-2018 IPR005185 Inner membrane component domain AL538_22285 1f18c03492165a4e40ed66741236c7f3 143 Pfam PF03733 Inner membrane component domain 76 126 1.6E-18 T 11-10-2018 IPR005185 Inner membrane component domain AL538_16715 6809bb3af5174fd972429526d5d6a143 194 Gene3D G3DSA:3.40.50.360 1 194 1.8E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_16715 6809bb3af5174fd972429526d5d6a143 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.731 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AL538_16715 6809bb3af5174fd972429526d5d6a143 194 SUPERFAMILY SSF52218 1 193 9.94E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_16715 6809bb3af5174fd972429526d5d6a143 194 Pfam PF02525 Flavodoxin-like fold 3 191 1.5E-43 T 11-10-2018 IPR003680 Flavodoxin-like fold AL538_20625 37c0c1b42191ea6a1e222ea03054f234 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 4.2E-33 T 11-10-2018 IPR007416 Protein of unknown function DUF469 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 SMART SM00905 6 116 2.7E-48 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 SUPERFAMILY SSF55620 3 117 4.11E-37 T 11-10-2018 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 Gene3D G3DSA:3.30.1130.10 1 118 2.5E-45 T 11-10-2018 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 3.2E-30 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 2.6E-36 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL538_11405 c11511c8d0dd6ce5d1708a79f20c0bae 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.8E-32 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AL538_01310 7cb60cfe191ab8ac7b43f32921e05b0d 205 Pfam PF01794 Ferric reductase like transmembrane component 50 161 2.7E-16 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain AL538_01310 7cb60cfe191ab8ac7b43f32921e05b0d 205 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 4 204 20.875 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AL538_13965 9a2376c072a1f7ef97e724a6a3bc7825 395 Pfam PF04471 Restriction endonuclease 242 359 1.1E-27 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AL538_13965 9a2376c072a1f7ef97e724a6a3bc7825 395 Gene3D G3DSA:3.40.91.100 226 383 3.3E-10 T 11-10-2018 AL538_13965 9a2376c072a1f7ef97e724a6a3bc7825 395 SUPERFAMILY SSF52980 246 362 4.93E-16 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_14095 c5d7ece6d08dbae5429972470063a91a 85 Gene3D G3DSA:1.10.1200.10 3 85 7.7E-19 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14095 c5d7ece6d08dbae5429972470063a91a 85 SUPERFAMILY SSF47336 4 83 3.93E-19 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14095 c5d7ece6d08dbae5429972470063a91a 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 3.6E-12 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL538_14095 c5d7ece6d08dbae5429972470063a91a 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.926 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AL538_12260 fb37039f8a657665aa8fe4a822991f72 247 Gene3D G3DSA:3.20.20.380 3 247 4.1E-90 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_12260 fb37039f8a657665aa8fe4a822991f72 247 SUPERFAMILY SSF110395 4 247 3.14E-78 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_12260 fb37039f8a657665aa8fe4a822991f72 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 31.399 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_12260 fb37039f8a657665aa8fe4a822991f72 247 Pfam PF03932 CutC family 4 205 1.4E-84 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AL538_14215 fff38ff8133c14738ae1b8141dc76f24 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 4.3E-103 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AL538_14215 fff38ff8133c14738ae1b8141dc76f24 331 Gene3D G3DSA:3.40.190.170 27 328 3.4E-90 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AL538_14215 fff38ff8133c14738ae1b8141dc76f24 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 5.4E-80 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL538_14215 fff38ff8133c14738ae1b8141dc76f24 331 PIRSF PIRSF006470 1 331 3.8E-123 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AL538_09005 260aa8708c379c4850799ea0bf815559 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 2.5E-18 T 11-10-2018 IPR009525 Protein of unknown function DUF1145 AL538_09610 da1ba13feafd0ec380b126d005616fdc 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 6.2E-37 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_09610 da1ba13feafd0ec380b126d005616fdc 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.488 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AL538_09610 da1ba13feafd0ec380b126d005616fdc 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.8E-60 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AL538_09610 da1ba13feafd0ec380b126d005616fdc 156 SUPERFAMILY SSF81573 63 121 7.19E-15 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AL538_09610 da1ba13feafd0ec380b126d005616fdc 156 Gene3D G3DSA:1.20.5.620 62 122 8.7E-24 T 11-10-2018 AL538_13525 852ce5db537a5b981fb83925704e06b6 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 1.6E-41 T 11-10-2018 AL538_13525 852ce5db537a5b981fb83925704e06b6 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.382 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AL538_03330 34980a9636c7e06be3cbd9ca42a3720c 255 Gene3D G3DSA:3.30.460.10 6 97 2.0E-6 T 11-10-2018 AL538_03330 34980a9636c7e06be3cbd9ca42a3720c 255 SUPERFAMILY SSF81301 13 88 1.05E-7 T 11-10-2018 AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 SMART SM00895 107 230 1.2E-22 T 11-10-2018 IPR011711 GntR, C-terminal AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 Gene3D G3DSA:1.20.120.530 101 238 3.3E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 SUPERFAMILY SSF46785 11 82 1.42E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 78 7.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 SUPERFAMILY SSF48008 108 236 1.44E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 SMART SM00345 19 78 7.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 Gene3D G3DSA:1.10.10.10 8 83 3.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_15515 1a94cbbf5dcf2d69500ffa708aed43aa 239 Pfam PF07729 FCD domain 108 228 1.3E-23 T 11-10-2018 IPR011711 GntR, C-terminal AL538_12510 bb39c6e82a862e0200abe1968802def2 248 Pfam PF00005 ABC transporter 17 172 8.9E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12510 bb39c6e82a862e0200abe1968802def2 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.3E-109 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AL538_12510 bb39c6e82a862e0200abe1968802def2 248 SMART SM00382 26 223 5.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12510 bb39c6e82a862e0200abe1968802def2 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_12510 bb39c6e82a862e0200abe1968802def2 248 Gene3D G3DSA:3.40.50.300 1 247 6.3E-65 T 11-10-2018 AL538_12510 bb39c6e82a862e0200abe1968802def2 248 SUPERFAMILY SSF52540 2 231 4.69E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05750 638375a7ca113a36a374a39e31406605 368 SUPERFAMILY SSF50685 24 351 1.19E-102 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL538_05750 638375a7ca113a36a374a39e31406605 368 Pfam PF06725 3D domain 273 349 5.5E-21 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AL538_05750 638375a7ca113a36a374a39e31406605 368 Gene3D G3DSA:2.40.240.50 120 258 5.5E-135 T 11-10-2018 AL538_05750 638375a7ca113a36a374a39e31406605 368 SMART SM00925 120 253 9.4E-66 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL538_05750 638375a7ca113a36a374a39e31406605 368 Gene3D G3DSA:2.40.40.10 52 349 5.5E-135 T 11-10-2018 IPR036908 RlpA-like domain superfamily AL538_05750 638375a7ca113a36a374a39e31406605 368 Pfam PF03562 MltA specific insert domain 146 252 2.4E-31 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AL538_08865 5a347345152540917cfe6a841295de9b 73 Gene3D G3DSA:1.10.238.160 2 59 1.3E-7 T 11-10-2018 AL538_08865 5a347345152540917cfe6a841295de9b 73 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 5.0E-22 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AL538_10725 d696006b0633878ca8fdd36ec7743d1c 269 Pfam PF00535 Glycosyl transferase family 2 13 170 2.7E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_10725 d696006b0633878ca8fdd36ec7743d1c 269 Gene3D G3DSA:3.90.550.10 2 247 4.6E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10725 d696006b0633878ca8fdd36ec7743d1c 269 SUPERFAMILY SSF53448 5 233 4.02E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_13780 9b2c7ff81c3bcc706a69c3b479ebd08d 261 SUPERFAMILY SSF81345 2 253 7.72E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_13780 9b2c7ff81c3bcc706a69c3b479ebd08d 261 Pfam PF00950 ABC 3 transport family 1 256 1.7E-73 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL538_13780 9b2c7ff81c3bcc706a69c3b479ebd08d 261 Gene3D G3DSA:1.10.3470.10 29 261 3.8E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 Pfam PF07238 PilZ domain 135 235 5.2E-13 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 SUPERFAMILY SSF141371 26 138 3.34E-32 T 11-10-2018 AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 Gene3D G3DSA:2.30.110.10 24 137 7.8E-40 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 Gene3D G3DSA:2.40.10.220 138 248 1.2E-37 T 11-10-2018 AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 Pfam PF12945 Flagellar protein YcgR 39 128 2.8E-13 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL538_17440 2e129abf3b2aa757a673c86c60a9198e 248 SUPERFAMILY SSF141371 139 247 3.66E-31 T 11-10-2018 AL538_21300 0ffb6f49ca9674531bbbaadf076c4115 355 Gene3D G3DSA:3.30.750.140 211 328 1.0E-21 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AL538_21300 0ffb6f49ca9674531bbbaadf076c4115 355 Pfam PF02120 Flagellar hook-length control protein FliK 235 315 1.1E-19 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL538_10980 d4c5107e2da4b11b7507475916a77e41 150 SUPERFAMILY SSF55729 1 148 7.32E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_10980 d4c5107e2da4b11b7507475916a77e41 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 2.6E-16 T 11-10-2018 IPR000182 GNAT domain AL538_10980 d4c5107e2da4b11b7507475916a77e41 150 Gene3D G3DSA:3.40.630.30 1 149 1.2E-44 T 11-10-2018 AL538_07935 ea5a41767e210e5aa3a76bda163c6921 75 Pfam PF04102 SlyX 9 75 9.1E-24 T 11-10-2018 IPR007236 SlyX AL538_07935 ea5a41767e210e5aa3a76bda163c6921 75 Gene3D G3DSA:1.20.5.300 2 51 5.3E-7 T 11-10-2018 AL538_07935 ea5a41767e210e5aa3a76bda163c6921 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.417 T 11-10-2018 IPR007236 SlyX AL538_27040 9243b3ff5212dd0010f18c876a56c810 177 SUPERFAMILY SSF53597 4 175 2.49E-32 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_27040 9243b3ff5212dd0010f18c876a56c810 177 Pfam PF01872 RibD C-terminal domain 4 164 6.9E-18 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AL538_27040 9243b3ff5212dd0010f18c876a56c810 177 Gene3D G3DSA:3.40.430.10 2 175 2.6E-50 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 SUPERFAMILY SSF52218 1 167 2.35E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 6.4E-69 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 Pfam PF00258 Flavodoxin 5 160 5.3E-28 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 Gene3D G3DSA:3.40.50.360 1 172 5.5E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_11885 f4abe01222aceec8bbf86f21a2bfffae 172 PIRSF PIRSF038996 1 171 3.2E-59 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL538_13695 6907525457adc58f7357ef3db6e083f1 177 SUPERFAMILY SSF52218 4 172 1.55E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_13695 6907525457adc58f7357ef3db6e083f1 177 PIRSF PIRSF038996 1 174 2.4E-66 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL538_13695 6907525457adc58f7357ef3db6e083f1 177 Gene3D G3DSA:3.40.50.360 3 176 4.3E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_13695 6907525457adc58f7357ef3db6e083f1 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 5.5E-71 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 AL538_13695 6907525457adc58f7357ef3db6e083f1 177 Pfam PF00258 Flavodoxin 6 162 1.7E-32 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AL538_13695 6907525457adc58f7357ef3db6e083f1 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AL538_20300 e593445a76411b62c7991cf41408b448 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_20300 e593445a76411b62c7991cf41408b448 251 Gene3D G3DSA:3.40.50.300 7 234 2.5E-56 T 11-10-2018 AL538_20300 e593445a76411b62c7991cf41408b448 251 SUPERFAMILY SSF52540 8 212 1.96E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20300 e593445a76411b62c7991cf41408b448 251 Pfam PF00005 ABC transporter 26 166 1.8E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_20300 e593445a76411b62c7991cf41408b448 251 SMART SM00382 34 213 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 SMART SM00530 17 79 2.0E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 7.8E-106 T 11-10-2018 IPR022055 Protein of unknown function DUF3612 AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 Pfam PF06114 IrrE N-terminal-like domain 188 326 4.2E-6 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 Pfam PF01381 Helix-turn-helix 18 79 2.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 Gene3D G3DSA:1.10.260.40 11 93 1.9E-13 T 11-10-2018 AL538_20730 9ec574101f748b947cfcf7d41a8a83d6 518 SUPERFAMILY SSF47413 12 84 1.32E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_21010 b7ebee470cbfcbf5742cb3b0e4f2b444 223 Pfam PF01464 Transglycosylase SLT domain 54 162 1.2E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AL538_21010 b7ebee470cbfcbf5742cb3b0e4f2b444 223 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 68 96 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AL538_21010 b7ebee470cbfcbf5742cb3b0e4f2b444 223 SUPERFAMILY SSF53955 39 181 8.66E-37 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_21010 b7ebee470cbfcbf5742cb3b0e4f2b444 223 Gene3D G3DSA:1.10.530.10 47 193 3.6E-33 T 11-10-2018 AL538_21710 7a951af4a310b534c6860970a72a25ac 271 SUPERFAMILY SSF47413 5 70 3.94E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_21710 7a951af4a310b534c6860970a72a25ac 271 Gene3D G3DSA:1.10.260.40 3 105 1.2E-9 T 11-10-2018 AL538_08645 ee5e20ff0a0cbdc8a1eb035d6ee512d4 163 PIRSF PIRSF016548 3 163 2.6E-69 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL538_08645 ee5e20ff0a0cbdc8a1eb035d6ee512d4 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 7.7E-55 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AL538_08645 ee5e20ff0a0cbdc8a1eb035d6ee512d4 163 Gene3D G3DSA:1.20.120.1370 1 156 4.0E-52 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily AL538_26395 c6c47b00343010e283ad81d43b406098 179 Pfam PF08534 Redoxin 8 147 2.1E-19 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_26395 c6c47b00343010e283ad81d43b406098 179 SUPERFAMILY SSF52833 7 176 6.12E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_26395 c6c47b00343010e283ad81d43b406098 179 Gene3D G3DSA:3.40.30.10 2 162 6.8E-22 T 11-10-2018 AL538_14490 6dce4e313dac4b6457170b76f2afc1b1 539 PIRSF PIRSF038984 1 535 7.5E-240 T 11-10-2018 IPR028348 FAD dependent protein AL538_14490 6dce4e313dac4b6457170b76f2afc1b1 539 SUPERFAMILY SSF51905 101 531 9.5E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_14490 6dce4e313dac4b6457170b76f2afc1b1 539 Gene3D G3DSA:3.30.70.2700 1 81 9.1E-34 T 11-10-2018 AL538_14490 6dce4e313dac4b6457170b76f2afc1b1 539 Gene3D G3DSA:3.50.50.60 86 305 9.6E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_14490 6dce4e313dac4b6457170b76f2afc1b1 539 Gene3D G3DSA:3.50.50.60 471 534 1.9E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_13300 b526f8d7f2bfe089426e3c1aa3649397 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 2.3E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AL538_13300 b526f8d7f2bfe089426e3c1aa3649397 157 SUPERFAMILY SSF55826 2 156 1.28E-43 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_13300 b526f8d7f2bfe089426e3c1aa3649397 157 Gene3D G3DSA:3.90.960.10 1 157 1.7E-58 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AL538_13300 b526f8d7f2bfe089426e3c1aa3649397 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.0E-60 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL538_13300 b526f8d7f2bfe089426e3c1aa3649397 157 PIRSF PIRSF006181 1 157 4.7E-54 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.223 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 Gene3D G3DSA:3.30.572.10 1 283 3.3E-80 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 SUPERFAMILY SSF55831 2 283 5.89E-91 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 Pfam PF00303 Thymidylate synthase 2 283 5.7E-74 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 9.7E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 9.7E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 9.7E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 9.7E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11960 aab119c4dff70e6cb7bc567021513b66 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 7.9E-42 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AL538_11355 c60c4a461ec56d44dee9690f2c25ce08 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 1.5E-16 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AL538_11355 c60c4a461ec56d44dee9690f2c25ce08 239 PIRSF PIRSF029033 1 239 1.4E-110 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AL538_11210 f09d8240126b291518edf9767e4676cf 781 Pfam PF03968 OstA-like protein 58 189 2.1E-17 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL538_11210 f09d8240126b291518edf9767e4676cf 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 753 20.345 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AL538_11210 f09d8240126b291518edf9767e4676cf 781 Gene3D G3DSA:2.60.450.10 51 133 3.2E-6 T 11-10-2018 AL538_11210 f09d8240126b291518edf9767e4676cf 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.2E-113 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AL538_26595 7388679a710d3b63a76e80230a681352 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.6E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_26595 7388679a710d3b63a76e80230a681352 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.6E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_26595 7388679a710d3b63a76e80230a681352 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.6E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AL538_26595 7388679a710d3b63a76e80230a681352 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.2E-45 T 11-10-2018 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 Gene3D G3DSA:3.40.718.10 2 340 8.6E-122 T 11-10-2018 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.3E-107 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 SUPERFAMILY SSF53659 4 336 4.52E-104 T 11-10-2018 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 Pfam PF02504 Fatty acid synthesis protein 5 327 2.1E-102 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 139.102 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL538_03910 3772d251e603ce0b81f2f53ab79d02b6 341 PIRSF PIRSF002465 2 339 1.5E-125 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AL538_22595 8508c4d8f99de5ca05882d4589978e80 201 SUPERFAMILY SSF53335 31 140 8.15E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_22595 8508c4d8f99de5ca05882d4589978e80 201 Gene3D G3DSA:3.40.50.150 7 170 4.7E-15 T 11-10-2018 AL538_22595 8508c4d8f99de5ca05882d4589978e80 201 Pfam PF13847 Methyltransferase domain 51 169 5.2E-11 T 11-10-2018 IPR025714 Methyltransferase domain AL538_15725 355cb6f8b50b39758ef470a67098271d 241 Pfam PF00106 short chain dehydrogenase 5 183 5.0E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15725 355cb6f8b50b39758ef470a67098271d 241 SUPERFAMILY SSF51735 4 236 1.65E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15725 355cb6f8b50b39758ef470a67098271d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15725 355cb6f8b50b39758ef470a67098271d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15725 355cb6f8b50b39758ef470a67098271d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15725 355cb6f8b50b39758ef470a67098271d 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AL538_15725 355cb6f8b50b39758ef470a67098271d 241 Gene3D G3DSA:3.40.50.720 4 215 1.7E-44 T 11-10-2018 AL538_26555 810d93d1fe4c82541811dd5c031ab453 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.9E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_26500 eab38ff846f97a05dc590596137ef856 329 Pfam PF00107 Zinc-binding dehydrogenase 154 244 1.1E-19 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_26500 eab38ff846f97a05dc590596137ef856 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 5.2E-6 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AL538_26500 eab38ff846f97a05dc590596137ef856 329 SUPERFAMILY SSF50129 1 139 1.0E-30 T 11-10-2018 IPR011032 GroES-like superfamily AL538_26500 eab38ff846f97a05dc590596137ef856 329 SUPERFAMILY SSF51735 115 248 2.25E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_26500 eab38ff846f97a05dc590596137ef856 329 Gene3D G3DSA:3.90.180.10 11 324 7.2E-69 T 11-10-2018 AL538_26500 eab38ff846f97a05dc590596137ef856 329 Gene3D G3DSA:3.40.50.720 126 271 7.2E-69 T 11-10-2018 AL538_26500 eab38ff846f97a05dc590596137ef856 329 SMART SM00829 8 325 1.1E-13 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10530 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_01945 7670157d8185f4313ced888581cbee17 182 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 175 4.5E-56 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AL538_01945 7670157d8185f4313ced888581cbee17 182 SUPERFAMILY SSF52540 4 176 3.12E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01945 7670157d8185f4313ced888581cbee17 182 PIRSF PIRSF006135 1 178 3.8E-50 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 AL538_01945 7670157d8185f4313ced888581cbee17 182 Gene3D G3DSA:3.40.50.300 3 176 2.6E-56 T 11-10-2018 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 Gene3D G3DSA:3.90.79.10 1 132 4.2E-42 T 11-10-2018 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 Pfam PF00293 NUDIX domain 7 126 5.4E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.8E-10 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.8E-10 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 SUPERFAMILY SSF55811 1 128 4.33E-35 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.6E-43 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AL538_11675 af1271fde3715c2be5e1e13b458bb9b2 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_13830 3a80fba2f733271d94c349ec19cc3e7b 199 SUPERFAMILY SSF54593 2 197 1.74E-67 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_13830 3a80fba2f733271d94c349ec19cc3e7b 199 Pfam PF06185 YecM protein 14 196 3.6E-68 T 11-10-2018 IPR010393 Protein of unknown function DUF991 AL538_13830 3a80fba2f733271d94c349ec19cc3e7b 199 Gene3D G3DSA:3.10.180.10 6 199 2.7E-62 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_23950 327d8cb99bb19d46ddc919810f6b846c 178 SUPERFAMILY SSF55174 14 87 5.23E-17 T 11-10-2018 AL538_23950 327d8cb99bb19d46ddc919810f6b846c 178 Pfam PF13275 S4 domain 25 86 1.0E-21 T 11-10-2018 AL538_23950 327d8cb99bb19d46ddc919810f6b846c 178 Gene3D G3DSA:3.10.290.10 13 88 5.9E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_03130 e89288b71d7c82850896cb624b5be3de 222 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 1.8E-60 T 11-10-2018 IPR021367 Protein of unknown function DUF2982 AL538_16775 670ea83d38bdd8441e34fe01b0c869a6 209 Pfam PF01810 LysE type translocator 15 205 1.2E-38 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_16775 670ea83d38bdd8441e34fe01b0c869a6 209 PIRSF PIRSF006324 1 209 4.6E-55 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_23860 2870dbb2436cad4784041766386b578e 954 SUPERFAMILY SSF53383 17 437 1.61E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_23860 2870dbb2436cad4784041766386b578e 954 Gene3D G3DSA:3.40.640.10 95 353 3.4E-105 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_23860 2870dbb2436cad4784041766386b578e 954 Gene3D G3DSA:3.40.640.10 522 748 3.2E-58 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_23860 2870dbb2436cad4784041766386b578e 954 SUPERFAMILY SSF53383 453 947 2.36E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_23860 2870dbb2436cad4784041766386b578e 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL538_23860 2870dbb2436cad4784041766386b578e 954 Gene3D G3DSA:3.90.1150.10 760 896 5.3E-42 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_23860 2870dbb2436cad4784041766386b578e 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.778 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL538_23860 2870dbb2436cad4784041766386b578e 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 2.4E-179 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL538_23860 2870dbb2436cad4784041766386b578e 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 2.1E-8 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 Gene3D G3DSA:3.30.450.20 3 137 6.4E-9 T 11-10-2018 AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 2.7E-44 T 11-10-2018 IPR000160 GGDEF domain AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 307 2.8E-51 T 11-10-2018 IPR000160 GGDEF domain AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 SUPERFAMILY SSF55073 152 308 2.98E-50 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 SMART SM00267 136 308 2.6E-55 T 11-10-2018 IPR000160 GGDEF domain AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 Gene3D G3DSA:3.30.70.270 138 311 7.2E-59 T 11-10-2018 AL538_08500 9d81f99008bd517acedd9718ee3ec954 329 SUPERFAMILY SSF55785 4 134 5.65E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 Gene3D G3DSA:3.20.20.70 1 317 9.2E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 TIGRFAM TIGR00874 talAB: transaldolase 2 317 1.1E-157 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 313 2.6E-101 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 SUPERFAMILY SSF51569 1 316 8.96E-114 T 11-10-2018 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_17720 42852b032bfa2f4aaaf376bcae2aab87 317 Hamap MF_00492 Transaldolase [tal]. 1 317 52.008 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 PIRSF PIRSF000538 2 498 1.5E-90 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 SUPERFAMILY SSF53067 255 484 1.57E-34 T 11-10-2018 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 Gene3D G3DSA:3.30.420.40 1 242 4.2E-62 T 11-10-2018 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 4.5E-55 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 SUPERFAMILY SSF53067 4 253 1.58E-52 T 11-10-2018 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 444 6.2E-18 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AL538_00175 93df30247363d09001fd8d9d1df5c69e 500 Gene3D G3DSA:3.30.420.40 253 499 1.1E-43 T 11-10-2018 AL538_16500 e64946688c3bf9e3b29a6be9199aa26d 208 Pfam PF01810 LysE type translocator 15 203 2.4E-39 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_16500 e64946688c3bf9e3b29a6be9199aa26d 208 PIRSF PIRSF006324 1 207 3.0E-61 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 458 6.0E-115 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 Gene3D G3DSA:1.20.1250.20 10 463 4.7E-129 T 11-10-2018 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 Pfam PF00083 Sugar (and other) transporter 21 462 5.6E-108 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 PRINTS PR00171 Sugar transporter signature 111 130 1.5E-23 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 PRINTS PR00171 Sugar transporter signature 358 379 1.5E-23 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 PRINTS PR00171 Sugar transporter signature 273 283 1.5E-23 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 PRINTS PR00171 Sugar transporter signature 381 393 1.5E-23 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 PRINTS PR00171 Sugar transporter signature 28 38 1.5E-23 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 AL538_18425 2037a6d7f4b268124c08d618eab01547 480 SUPERFAMILY SSF103473 11 461 2.49E-73 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_18850 4110becf7be4d1f4bf3fbe7e892b8463 396 SMART SM00267 180 362 6.0E-51 T 11-10-2018 IPR000160 GGDEF domain AL538_18850 4110becf7be4d1f4bf3fbe7e892b8463 396 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 361 1.8E-42 T 11-10-2018 IPR000160 GGDEF domain AL538_18850 4110becf7be4d1f4bf3fbe7e892b8463 396 Gene3D G3DSA:3.30.70.270 186 378 2.3E-51 T 11-10-2018 AL538_18850 4110becf7be4d1f4bf3fbe7e892b8463 396 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 2.3E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_18850 4110becf7be4d1f4bf3fbe7e892b8463 396 SUPERFAMILY SSF55073 196 363 2.75E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_11720 871f66571ddc1279e4ae4bfdd7dd74db 206 Pfam PF03458 UPF0126 domain 95 165 4.1E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL538_11720 871f66571ddc1279e4ae4bfdd7dd74db 206 Pfam PF03458 UPF0126 domain 8 81 2.8E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 Gene3D G3DSA:3.90.79.10 2 137 9.5E-46 T 11-10-2018 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 SUPERFAMILY SSF55811 5 122 2.98E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 Pfam PF00293 NUDIX domain 6 122 1.1E-22 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 PRINTS PR00502 NUDIX hydrolase family signature 47 62 9.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_01600 9ae68a7046e1169219d48c4090bda66c 142 PRINTS PR00502 NUDIX hydrolase family signature 33 47 9.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_12900 597341e45b15f8d67fc15708858811c8 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site AL538_12900 597341e45b15f8d67fc15708858811c8 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 5.0E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_10645 d3f4e16ea5190d94b502d39270a7c5b9 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 3.0E-255 T 11-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH AL538_11540 f4ef321a0ffc0f7b41c803c013936abf 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.795 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AL538_11540 f4ef321a0ffc0f7b41c803c013936abf 130 Gene3D G3DSA:3.30.230.10 1 130 5.4E-54 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_11540 f4ef321a0ffc0f7b41c803c013936abf 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AL538_11540 f4ef321a0ffc0f7b41c803c013936abf 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AL538_11540 f4ef321a0ffc0f7b41c803c013936abf 130 SUPERFAMILY SSF54211 5 130 2.54E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_07300 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-53 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AL538_07300 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 SUPERFAMILY SSF55298 2 128 4.87E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_07300 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 AL538_07300 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 4.5E-45 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_07300 ecbb799d173e5bcb5273e5a6d4a3c3dc 129 Gene3D G3DSA:3.30.1330.40 2 129 6.1E-48 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_15520 d90935c406ac6decb1182c6853b80cac 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 4.9E-45 T 11-10-2018 AL538_15520 d90935c406ac6decb1182c6853b80cac 258 SUPERFAMILY SSF51735 6 257 1.2E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_15520 d90935c406ac6decb1182c6853b80cac 258 Gene3D G3DSA:3.40.50.720 1 257 2.7E-72 T 11-10-2018 AL538_04100 99997bb577fd160b19906432c8704cfd 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.099 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04100 99997bb577fd160b19906432c8704cfd 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 2.7E-71 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04100 99997bb577fd160b19906432c8704cfd 158 Gene3D G3DSA:3.30.70.640 1 158 2.5E-69 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04100 99997bb577fd160b19906432c8704cfd 158 Pfam PF01967 MoaC family 15 150 1.1E-55 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_04100 99997bb577fd160b19906432c8704cfd 158 SUPERFAMILY SSF55040 11 155 2.48E-61 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AL538_17525 843cbf4c8c2ac9b8dba6f1d919145821 68 Pfam PF04400 (Na+)-NQR maturation NqrM 21 63 1.3E-19 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL538_26220 6923072e3ba8d73fec3670d4f0ec8fb4 139 Pfam PF00583 Acetyltransferase (GNAT) family 31 115 1.8E-11 T 11-10-2018 IPR000182 GNAT domain AL538_26220 6923072e3ba8d73fec3670d4f0ec8fb4 139 SUPERFAMILY SSF55729 11 137 6.15E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_26220 6923072e3ba8d73fec3670d4f0ec8fb4 139 Gene3D G3DSA:3.40.630.30 35 138 1.3E-24 T 11-10-2018 AL538_10560 4865aa4ccbea48fd5dcef03ed18bc4dd 262 Gene3D G3DSA:3.90.550.10 1 235 9.8E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10560 4865aa4ccbea48fd5dcef03ed18bc4dd 262 SUPERFAMILY SSF53448 1 256 4.13E-39 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10560 4865aa4ccbea48fd5dcef03ed18bc4dd 262 Pfam PF00535 Glycosyl transferase family 2 5 109 1.0E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_10560 4865aa4ccbea48fd5dcef03ed18bc4dd 262 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 7.2E-15 T 11-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 Gene3D G3DSA:3.30.200.20 12 129 2.7E-24 T 11-10-2018 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 Gene3D G3DSA:3.30.470.20 130 292 5.3E-14 T 11-10-2018 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.288 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 SUPERFAMILY SSF56104 14 344 1.31E-66 T 11-10-2018 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 Pfam PF01259 SAICAR synthetase 22 293 1.4E-47 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AL538_02215 7a91b0563b77336bb57c290ac26420ba 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 5.7E-212 T 11-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AL538_24875 8591b3aa014327b47224b04217a2f576 607 Pfam PF05947 Type VI secretion system, TssF 6 605 2.8E-171 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_24875 8591b3aa014327b47224b04217a2f576 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 5.8E-186 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_24875 8591b3aa014327b47224b04217a2f576 607 PIRSF PIRSF028304 1 606 2.8E-144 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_17635 c21834a325c048bd2c1142d134013759 154 Pfam PF12796 Ankyrin repeats (3 copies) 40 127 7.9E-12 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AL538_17635 c21834a325c048bd2c1142d134013759 154 SMART SM00248 99 128 560.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_17635 c21834a325c048bd2c1142d134013759 154 SMART SM00248 66 95 0.0011 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_17635 c21834a325c048bd2c1142d134013759 154 SMART SM00248 33 62 2000.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AL538_17635 c21834a325c048bd2c1142d134013759 154 SUPERFAMILY SSF48403 36 152 5.91E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL538_17635 c21834a325c048bd2c1142d134013759 154 Gene3D G3DSA:1.25.40.20 3 154 1.3E-24 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AL538_19580 fe1ad4dd52baabda3acfba884f6189aa 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 9.7E-218 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AL538_19580 fe1ad4dd52baabda3acfba884f6189aa 497 Gene3D G3DSA:1.20.1730.10 12 495 2.6E-96 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_19580 fe1ad4dd52baabda3acfba884f6189aa 497 Pfam PF00474 Sodium:solute symporter family 36 437 1.4E-106 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_19580 fe1ad4dd52baabda3acfba884f6189aa 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 8.0E-95 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_27880 37a89a2d5309651c5effd94befb14319 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 5.4E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_20805 0a3712bdefcc6362ccab9d4df7c7a4be 105 Pfam PF09350 Domain of unknown function (DUF1992) 13 74 1.7E-12 T 11-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain AL538_05130 81b47b11800f8d32c039f055390c6225 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 9.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_05130 81b47b11800f8d32c039f055390c6225 345 SUPERFAMILY SSF55785 18 85 5.82E-7 T 11-10-2018 IPR035965 PAS domain superfamily AL538_05130 81b47b11800f8d32c039f055390c6225 345 Gene3D G3DSA:3.30.565.10 190 342 3.4E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_05130 81b47b11800f8d32c039f055390c6225 345 Pfam PF13188 PAS domain 18 72 5.3E-6 T 11-10-2018 IPR000014 PAS domain AL538_05130 81b47b11800f8d32c039f055390c6225 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 5.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05130 81b47b11800f8d32c039f055390c6225 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 5.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05130 81b47b11800f8d32c039f055390c6225 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 5.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05130 81b47b11800f8d32c039f055390c6225 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 5.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AL538_05130 81b47b11800f8d32c039f055390c6225 345 Gene3D G3DSA:1.10.287.130 109 185 3.5E-9 T 11-10-2018 AL538_05130 81b47b11800f8d32c039f055390c6225 345 SMART SM00388 122 188 1.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_05130 81b47b11800f8d32c039f055390c6225 345 SMART SM00387 231 337 6.2E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AL538_05130 81b47b11800f8d32c039f055390c6225 345 Gene3D G3DSA:3.30.450.20 9 108 3.1E-5 T 11-10-2018 AL538_05130 81b47b11800f8d32c039f055390c6225 345 SUPERFAMILY SSF55874 177 336 4.06E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_05130 81b47b11800f8d32c039f055390c6225 345 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 1.3E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AL538_05130 81b47b11800f8d32c039f055390c6225 345 SUPERFAMILY SSF47384 117 188 4.51E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AL538_22260 9b2e7397d85f7ce6f75c03f311a93cd8 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 1.2E-29 T 11-10-2018 IPR005272 Conserved hypothetical protein CHP00743 AL538_22260 9b2e7397d85f7ce6f75c03f311a93cd8 99 Gene3D G3DSA:3.30.70.860 2 99 1.3E-40 T 11-10-2018 IPR035571 UPF0234-like, C-terminal AL538_07495 d33cae7601653177c8268c8de7779930 182 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 4.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07495 d33cae7601653177c8268c8de7779930 182 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 1.3E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07495 d33cae7601653177c8268c8de7779930 182 SUPERFAMILY SSF54523 10 67 3.53E-6 T 11-10-2018 AL538_07495 d33cae7601653177c8268c8de7779930 182 Gene3D G3DSA:3.30.700.10 10 180 2.3E-5 T 11-10-2018 AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 SMART SM00382 50 252 1.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 Gene3D G3DSA:3.40.50.300 21 269 6.8E-66 T 11-10-2018 AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.2E-124 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 Pfam PF00005 ABC transporter 41 197 7.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_12230 a1fe0d6dcd01970cf6636695e0998cb3 272 SUPERFAMILY SSF52540 22 258 3.31E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 359 1.8E-71 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 Gene3D G3DSA:2.40.30.170 66 286 9.5E-75 T 11-10-2018 AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 Gene3D G3DSA:2.40.50.100 73 205 9.5E-75 T 11-10-2018 AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 266 5.1E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 Gene3D G3DSA:2.40.420.20 287 356 9.5E-75 T 11-10-2018 AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 Gene3D G3DSA:1.10.287.470 107 166 9.5E-75 T 11-10-2018 AL538_23890 1c41b1472e29c95dda2620809e641ff5 365 SUPERFAMILY SSF111369 65 282 8.63E-33 T 11-10-2018 AL538_10300 cd66ee5cd10d3d3a8edc8159361e0312 164 SUPERFAMILY SSF103054 86 163 1.02E-24 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily AL538_10300 cd66ee5cd10d3d3a8edc8159361e0312 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 9.0E-54 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL538_10300 cd66ee5cd10d3d3a8edc8159361e0312 164 PIRSF PIRSF006291 3 163 3.4E-40 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL538_10300 cd66ee5cd10d3d3a8edc8159361e0312 164 Gene3D G3DSA:3.30.1360.100 86 164 9.5E-31 T 11-10-2018 AL538_18735 f8df71d4a8245d3d398368d5d6d2dfa1 257 SUPERFAMILY SSF63380 6 118 6.81E-11 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AL538_18735 f8df71d4a8245d3d398368d5d6d2dfa1 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 6.4E-33 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting AL538_18735 f8df71d4a8245d3d398368d5d6d2dfa1 257 Pfam PF04954 Siderophore-interacting protein 127 238 2.7E-30 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain AL538_18735 f8df71d4a8245d3d398368d5d6d2dfa1 257 Gene3D G3DSA:3.40.50.80 122 257 5.8E-44 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AL538_18735 f8df71d4a8245d3d398368d5d6d2dfa1 257 Gene3D G3DSA:2.40.30.10 1 119 3.5E-33 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Gene3D G3DSA:2.40.30.170 339 422 6.2E-16 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Pfam PF13437 HlyD family secretion protein 302 407 1.8E-16 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Gene3D G3DSA:2.40.50.100 78 103 5.1E-8 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Gene3D G3DSA:1.10.287.470 224 301 6.2E-16 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Pfam PF13533 Biotin-lipoyl like 79 113 1.4E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 SUPERFAMILY SSF111369 72 128 1.19E-5 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 8.2E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Gene3D G3DSA:2.40.50.100 302 338 6.2E-16 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 Gene3D G3DSA:1.10.287.470 104 176 5.1E-8 T 11-10-2018 AL538_17200 bee18a3f32dc215f9649d06247a4ae2d 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 446 6.2E-100 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AL538_00435 8bb2b78a6ba92f10af8d547618f90c68 182 SMART SM00862 24 99 1.2E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_00435 8bb2b78a6ba92f10af8d547618f90c68 182 SUPERFAMILY SSF46894 6 101 8.79E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_00435 8bb2b78a6ba92f10af8d547618f90c68 182 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 99 4.8E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_00435 8bb2b78a6ba92f10af8d547618f90c68 182 Gene3D G3DSA:1.10.10.10 4 115 6.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 SUPERFAMILY SSF46689 213 260 2.4E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 SUPERFAMILY SSF51182 19 185 5.04E-10 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 Pfam PF02311 AraC-like ligand binding domain 33 144 6.5E-5 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 SMART SM00342 176 258 9.8E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 Pfam PF12833 Helix-turn-helix domain 182 260 6.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 Gene3D G3DSA:1.10.10.60 156 261 4.6E-23 T 11-10-2018 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 5.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_22200 c2b24b5a9de05f569ce39028100aa1fd 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 5.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AL538_10080 605e615988e3eaa10227c845b8be3d96 302 SUPERFAMILY SSF103481 44 144 3.4E-11 T 11-10-2018 AL538_10080 605e615988e3eaa10227c845b8be3d96 302 SUPERFAMILY SSF103481 187 287 3.53E-10 T 11-10-2018 AL538_10080 605e615988e3eaa10227c845b8be3d96 302 Pfam PF00892 EamA-like transporter family 155 286 5.1E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_10080 605e615988e3eaa10227c845b8be3d96 302 Pfam PF00892 EamA-like transporter family 9 141 1.3E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_08860 8e8ebf51d6a7bcb4b3abccfc501dbe98 329 SUPERFAMILY SSF52540 26 174 2.21E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_08860 8e8ebf51d6a7bcb4b3abccfc501dbe98 329 Pfam PF01926 50S ribosome-binding GTPase 42 134 5.2E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AL538_08860 8e8ebf51d6a7bcb4b3abccfc501dbe98 329 Gene3D G3DSA:3.40.50.300 2 277 5.1E-24 T 11-10-2018 AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 SUPERFAMILY SSF53448 10 231 4.33E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 230 42.46 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 231 3.3E-78 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 Gene3D G3DSA:3.90.550.10 4 234 8.2E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_06735 3c5d227ef412c92ee8f9bc5376db0dfc 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 230 3.6E-77 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AL538_07455 924e041fad28db68e41195ceb9d352f6 189 Gene3D G3DSA:3.90.950.10 5 189 6.0E-71 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_07455 924e041fad28db68e41195ceb9d352f6 189 SUPERFAMILY SSF52972 6 187 1.24E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AL538_07455 924e041fad28db68e41195ceb9d352f6 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 1.6E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_07455 924e041fad28db68e41195ceb9d352f6 189 PIRSF PIRSF006305 2 189 7.9E-60 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_07455 924e041fad28db68e41195ceb9d352f6 189 Pfam PF02545 Maf-like protein 7 187 2.9E-60 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_07455 924e041fad28db68e41195ceb9d352f6 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.74 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AL538_19185 ec234896eb5ea60b8a6c0ef0b9cb04ab 235 Pfam PF01730 UreF 46 193 1.5E-37 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AL538_19185 ec234896eb5ea60b8a6c0ef0b9cb04ab 235 PIRSF PIRSF009467 12 235 2.5E-58 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AL538_19185 ec234896eb5ea60b8a6c0ef0b9cb04ab 235 Hamap MF_01385 Urease accessory protein UreF [ureF]. 14 235 30.671 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AL538_19185 ec234896eb5ea60b8a6c0ef0b9cb04ab 235 Gene3D G3DSA:1.10.4190.10 12 212 4.0E-50 T 11-10-2018 IPR038277 UreF domain superfamily AL538_13875 8482a2510cc7396a6aa77aa403060b70 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.895 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL538_13875 8482a2510cc7396a6aa77aa403060b70 87 SUPERFAMILY SSF55229 33 85 6.15E-17 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AL538_13875 8482a2510cc7396a6aa77aa403060b70 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.1E-34 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL538_13875 8482a2510cc7396a6aa77aa403060b70 87 Gene3D G3DSA:3.30.1070.10 1 84 2.3E-26 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 AL538_13875 8482a2510cc7396a6aa77aa403060b70 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 9.9E-24 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 Gene3D G3DSA:1.10.10.10 3 89 5.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 SUPERFAMILY SSF53850 90 293 2.53E-52 T 11-10-2018 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 Gene3D G3DSA:3.40.190.10 91 290 6.8E-74 T 11-10-2018 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 Pfam PF03466 LysR substrate binding domain 89 292 4.5E-50 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 Gene3D G3DSA:3.40.190.10 163 263 6.8E-74 T 11-10-2018 AL538_19830 a4d3a91646ebb5468841e0b61cd671ab 296 SUPERFAMILY SSF46785 4 112 1.14E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 SUPERFAMILY SSF55174 19 71 3.79E-9 T 11-10-2018 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 Pfam PF01479 S4 domain 20 66 2.9E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 7.5E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 1.2E-91 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 Gene3D G3DSA:3.10.290.10 8 75 2.9E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 Gene3D G3DSA:3.30.2350.10 93 314 5.9E-78 T 11-10-2018 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 SUPERFAMILY SSF55120 91 310 1.06E-63 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_03930 1c73889edb94d1f9a40ea128e8d7a673 314 SMART SM00363 20 77 1.6E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AL538_10720 531c698532ee176f29cc71460337723c 317 SUPERFAMILY SSF53448 3 219 2.14E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10720 531c698532ee176f29cc71460337723c 317 Pfam PF00535 Glycosyl transferase family 2 5 161 1.4E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_10720 531c698532ee176f29cc71460337723c 317 Gene3D G3DSA:3.90.550.10 1 245 2.2E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_19755 87cdd6df977a03273e99d587611d2e4f 169 Pfam PF10688 Bacterial inner membrane protein 4 161 2.2E-54 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV AL538_19755 87cdd6df977a03273e99d587611d2e4f 169 PIRSF PIRSF011443 1 168 1.9E-47 T 11-10-2018 IPR026267 Inner membrane protein YgjV AL538_01095 f0cdf80e5a855796c7fd3c7a537cca9b 192 Pfam PF16964 Putative tight adherence pilin protein F 4 176 3.5E-23 T 11-10-2018 IPR031582 Putative tight adherence pilin protein F AL538_16165 ab3c2e4888f7491b5c94a820edbd0f1c 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 2.0E-37 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL538_16165 ab3c2e4888f7491b5c94a820edbd0f1c 92 SUPERFAMILY SSF50715 1 92 1.45E-27 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_16165 ab3c2e4888f7491b5c94a820edbd0f1c 92 Pfam PF01386 Ribosomal L25p family 4 89 5.1E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL538_16165 ab3c2e4888f7491b5c94a820edbd0f1c 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.251 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AL538_16165 ab3c2e4888f7491b5c94a820edbd0f1c 92 Gene3D G3DSA:2.40.240.10 1 92 3.4E-33 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AL538_24515 bd401007f589b102ed2075175f515fc6 218 Pfam PF07885 Ion channel 126 210 6.0E-16 T 11-10-2018 IPR013099 Potassium channel domain AL538_24515 bd401007f589b102ed2075175f515fc6 218 SUPERFAMILY SSF81324 118 211 4.58E-18 T 11-10-2018 AL538_24515 bd401007f589b102ed2075175f515fc6 218 Gene3D G3DSA:1.10.287.70 115 218 2.6E-18 T 11-10-2018 AL538_07675 9c09c7fbab3332ad50690c7c397171ff 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 8.1E-22 T 11-10-2018 IPR014318 Phage shock protein, PspG AL538_07675 9c09c7fbab3332ad50690c7c397171ff 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 4.4E-23 T 11-10-2018 IPR014318 Phage shock protein, PspG AL538_25905 aedcba64e9945223f9ac038f9663689f 408 Gene3D G3DSA:2.70.98.80 22 406 1.6E-125 T 11-10-2018 AL538_25905 aedcba64e9945223f9ac038f9663689f 408 Pfam PF14486 Domain of unknown function (DUF4432) 68 373 5.9E-107 T 11-10-2018 IPR027839 Protein of unknown function DUF4432 AL538_23250 9218f530a896e6c3de23af8576d4fb28 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 1.7E-123 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AL538_23250 9218f530a896e6c3de23af8576d4fb28 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 1.6E-139 T 11-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 AL538_25745 e8334f0aa072cee39710e75cf3cbd108 139 SUPERFAMILY SSF102546 1 139 3.14E-43 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL538_25745 e8334f0aa072cee39710e75cf3cbd108 139 Gene3D G3DSA:3.40.1650.10 8 136 4.8E-36 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL538_25745 e8334f0aa072cee39710e75cf3cbd108 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 32.808 T 11-10-2018 IPR023064 D-ribose pyranase GO:0016872 AL538_25745 e8334f0aa072cee39710e75cf3cbd108 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.6E-47 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 Gene3D G3DSA:3.20.20.60 2 420 5.8E-182 T 11-10-2018 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 ProSitePatterns PS00161 Isocitrate lyase signature. 196 201 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 PIRSF PIRSF001362 1 437 9.7E-224 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 11 258 3.2E-114 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 259 437 5.2E-90 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 SUPERFAMILY SSF51621 6 437 6.73E-153 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_12280 e6915d714db677dd2aa3d260a1772e4f 437 Pfam PF00463 Isocitrate lyase family 15 258 2.1E-61 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AL538_04685 eb2e0ef4a9b0e4bc969f8f479601eddc 315 PIRSF PIRSF020419 1 299 3.6E-77 T 11-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AL538_04685 eb2e0ef4a9b0e4bc969f8f479601eddc 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 2.7E-60 T 11-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AL538_04685 eb2e0ef4a9b0e4bc969f8f479601eddc 315 Gene3D G3DSA:3.40.50.11550 45 269 5.2E-30 T 11-10-2018 AL538_04685 eb2e0ef4a9b0e4bc969f8f479601eddc 315 Gene3D G3DSA:1.10.8.760 155 219 5.2E-30 T 11-10-2018 AL538_04685 eb2e0ef4a9b0e4bc969f8f479601eddc 315 SUPERFAMILY SSF159501 33 282 5.75E-77 T 11-10-2018 AL538_00930 790fe508461de4735e13b5c8520835b2 163 Pfam PF14539 Domain of unknown function (DUF4442) 18 110 2.4E-11 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AL538_00930 790fe508461de4735e13b5c8520835b2 163 Gene3D G3DSA:3.10.129.10 5 155 1.7E-27 T 11-10-2018 AL538_00930 790fe508461de4735e13b5c8520835b2 163 SUPERFAMILY SSF54637 12 157 3.36E-18 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 203 1.4E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 209 9.4E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 7.0E-23 T 11-10-2018 AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 SUPERFAMILY SSF56784 3 237 3.93E-41 T 11-10-2018 IPR036412 HAD-like superfamily AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 Gene3D G3DSA:3.40.50.1000 3 232 4.3E-59 T 11-10-2018 IPR023214 HAD superfamily AL538_09890 0e93485ba684c83a6b8be7acf752a4e0 241 Gene3D G3DSA:1.20.120.710 15 109 4.3E-59 T 11-10-2018 AL538_24180 89a3d52b1b209bc48c44523182d6739d 279 Gene3D G3DSA:2.60.120.330 1 279 6.2E-96 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AL538_24180 89a3d52b1b209bc48c44523182d6739d 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 1.8E-9 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AL538_24180 89a3d52b1b209bc48c44523182d6739d 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.6E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL538_24180 89a3d52b1b209bc48c44523182d6739d 279 SUPERFAMILY SSF51197 7 276 7.55E-62 T 11-10-2018 AL538_14550 a43fb4dec50dc59819d5dc18d2bae6e9 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.2E-68 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL538_14550 a43fb4dec50dc59819d5dc18d2bae6e9 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.638 T 11-10-2018 IPR022987 Uncharacterised protein family UPF0227 AL538_14550 a43fb4dec50dc59819d5dc18d2bae6e9 179 SUPERFAMILY SSF53474 2 176 9.04E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_14550 a43fb4dec50dc59819d5dc18d2bae6e9 179 Gene3D G3DSA:3.40.50.1820 1 179 2.3E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_19520 1817211b32967dbea5a5d5a57690a83d 199 Pfam PF00924 Mechanosensitive ion channel 69 174 2.7E-10 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AL538_19520 1817211b32967dbea5a5d5a57690a83d 199 Gene3D G3DSA:2.30.30.60 124 175 6.1E-6 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AL538_19520 1817211b32967dbea5a5d5a57690a83d 199 SUPERFAMILY SSF50182 109 175 1.96E-11 T 11-10-2018 IPR010920 LSM domain superfamily AL538_21000 7dde6302d70f19d54df3b67c360f1867 86 Pfam PF03891 Domain of unknown function (DUF333) 35 79 3.3E-16 T 11-10-2018 IPR005590 Protein of unknown function DUF333 AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 SUPERFAMILY SSF51206 7 133 1.57E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.0E-47 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Gene3D G3DSA:3.10.580.10 144 281 6.5E-34 T 11-10-2018 AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Pfam PF00571 CBS domain 225 277 6.5E-12 T 11-10-2018 IPR000644 CBS domain AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Pfam PF00571 CBS domain 153 211 5.2E-9 T 11-10-2018 IPR000644 CBS domain AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 9.3E-45 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 SUPERFAMILY SSF54631 146 278 3.16E-30 T 11-10-2018 AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Gene3D G3DSA:2.60.120.10 2 135 5.6E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 SMART SM00116 159 215 5.3E-4 T 11-10-2018 IPR000644 CBS domain AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 SMART SM00116 232 279 2.2E-5 T 11-10-2018 IPR000644 CBS domain AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 2.0E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_01415 188431498b93166d0dbe3d8fa3c4d001 626 SMART SM00100 17 134 1.6E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 Pfam PF00270 DEAD/DEAH box helicase 89 216 1.1E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 SMART SM00487 81 260 0.0015 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 Gene3D G3DSA:3.40.50.300 78 227 4.3E-13 T 11-10-2018 AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 SMART SM00490 325 414 0.0069 T 11-10-2018 IPR001650 Helicase, C-terminal AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 Gene3D G3DSA:3.40.50.300 234 436 1.7E-15 T 11-10-2018 AL538_20425 2c5320a8049ade32038ed0d4236f0437 699 SUPERFAMILY SSF52540 92 424 6.15E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 2.1E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 Gene3D G3DSA:3.40.50.2300 23 142 2.1E-25 T 11-10-2018 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 SUPERFAMILY SSF46894 140 210 1.46E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 SMART SM00421 151 208 1.5E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_07565 2697ce2e505f077834fcdda3c3c23d30 214 Gene3D G3DSA:1.10.10.10 144 213 1.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 Pfam PF00850 Histone deacetylase domain 30 285 1.0E-50 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 Gene3D G3DSA:3.40.800.20 2 302 1.1E-66 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 SUPERFAMILY SSF52768 3 285 1.77E-80 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 4.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 4.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL538_04605 c6e7abc91f757e45141767f61a7b0b26 307 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 4.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AL538_17985 8266eae381b21746d75c73719a132804 446 PIRSF PIRSF004548 1 440 3.5E-137 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AL538_17985 8266eae381b21746d75c73719a132804 446 Pfam PF06123 Inner membrane protein CreD 9 429 1.4E-143 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AL538_20230 f34b331d22403aa515d8803285cfa770 149 SUPERFAMILY SSF55729 15 148 2.53E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_20230 f34b331d22403aa515d8803285cfa770 149 Gene3D G3DSA:3.40.630.30 8 149 6.9E-39 T 11-10-2018 AL538_20230 f34b331d22403aa515d8803285cfa770 149 Pfam PF00583 Acetyltransferase (GNAT) family 32 114 5.7E-11 T 11-10-2018 IPR000182 GNAT domain AL538_26360 79f02886aca78b9f1ea1b7398a602aa2 470 Gene3D G3DSA:3.40.50.2300 364 464 1.4E-29 T 11-10-2018 AL538_26360 79f02886aca78b9f1ea1b7398a602aa2 470 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 457 2.8E-10 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AL538_26360 79f02886aca78b9f1ea1b7398a602aa2 470 Pfam PF02378 Phosphotransferase system, EIIC 19 276 1.1E-19 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_26360 79f02886aca78b9f1ea1b7398a602aa2 470 SUPERFAMILY SSF52794 376 462 1.2E-19 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 AL538_26360 79f02886aca78b9f1ea1b7398a602aa2 470 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.6E-148 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 AL538_26350 6ac1cfda303866fcd48c4a0195fbd813 172 Pfam PF05068 Mannitol repressor 4 166 1.2E-49 T 11-10-2018 IPR007761 Mannitol repressor MtlR-like AL538_26350 6ac1cfda303866fcd48c4a0195fbd813 172 SUPERFAMILY SSF158668 3 166 8.11E-50 T 11-10-2018 IPR038026 MtlR-like superfamily AL538_26350 6ac1cfda303866fcd48c4a0195fbd813 172 Gene3D G3DSA:1.20.120.330 1 168 2.3E-48 T 11-10-2018 AL538_27100 32db7f88b5258d791d3e1e0cf0555e5b 85 SUPERFAMILY SSF47413 11 78 1.29E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_27100 32db7f88b5258d791d3e1e0cf0555e5b 85 Gene3D G3DSA:1.10.260.40 3 81 2.3E-22 T 11-10-2018 AL538_27100 32db7f88b5258d791d3e1e0cf0555e5b 85 Pfam PF13693 Winged helix-turn-helix DNA-binding 18 81 1.1E-18 T 11-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 Gene3D G3DSA:3.40.1260.20 403 489 9.3E-7 T 11-10-2018 AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 SMART SM00316 37 122 5.8E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 11-10-2018 AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.3E-173 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 AL538_07450 ad0cf574c15be934a3de32ead3e226ee 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.3E-104 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AL538_25480 2818c088d0916a1885d966091daf1371 296 SUPERFAMILY SSF53850 89 290 5.7E-34 T 11-10-2018 AL538_25480 2818c088d0916a1885d966091daf1371 296 Gene3D G3DSA:3.40.190.290 91 296 1.2E-35 T 11-10-2018 AL538_25480 2818c088d0916a1885d966091daf1371 296 Gene3D G3DSA:1.10.10.10 1 82 8.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_25480 2818c088d0916a1885d966091daf1371 296 Pfam PF03466 LysR substrate binding domain 88 287 7.6E-36 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_25480 2818c088d0916a1885d966091daf1371 296 SUPERFAMILY SSF46785 2 111 8.16E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_25480 2818c088d0916a1885d966091daf1371 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_14560 6ca46823a59abe97bb08f7ea545e4473 182 Gene3D G3DSA:3.40.630.30 1 178 5.0E-46 T 11-10-2018 AL538_14560 6ca46823a59abe97bb08f7ea545e4473 182 SUPERFAMILY SSF55729 3 177 1.41E-43 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_14560 6ca46823a59abe97bb08f7ea545e4473 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 2.4E-21 T 11-10-2018 IPR000182 GNAT domain AL538_18260 c817cb75d90e4329f6726a9ee07a0f9c 374 Gene3D G3DSA:2.40.160.50 90 372 7.4E-10 T 11-10-2018 AL538_18260 c817cb75d90e4329f6726a9ee07a0f9c 374 Pfam PF01103 Surface antigen 91 295 2.1E-9 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL538_05515 0cd90c57dce084d038e5dd9484325bfa 168 Pfam PF13302 Acetyltransferase (GNAT) domain 30 138 1.2E-19 T 11-10-2018 IPR000182 GNAT domain AL538_05515 0cd90c57dce084d038e5dd9484325bfa 168 Gene3D G3DSA:3.40.630.30 1 149 2.7E-26 T 11-10-2018 AL538_05515 0cd90c57dce084d038e5dd9484325bfa 168 SUPERFAMILY SSF55729 2 146 1.8E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 Pfam PF02706 Chain length determinant protein 14 106 4.4E-21 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 506 709 2.5E-50 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 SUPERFAMILY SSF52540 524 699 2.48E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 449 3.9E-34 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 Pfam PF13614 AAA domain 536 648 1.7E-11 T 11-10-2018 IPR025669 AAA domain AL538_18225 9ee6fe012bf7c131b72fe6b2727c4298 716 Gene3D G3DSA:3.40.50.300 441 716 2.0E-77 T 11-10-2018 AL538_16245 393d249e76c21ebc71e9a90c191157ce 836 Pfam PF02687 FtsX-like permease family 288 387 6.5E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_16245 393d249e76c21ebc71e9a90c191157ce 836 Pfam PF02687 FtsX-like permease family 734 828 1.7E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_22985 d966f2b13a4ca7f7da10fc6874a18431 232 Pfam PF11769 Protein of unknown function (DUF3313) 22 219 1.0E-44 T 11-10-2018 IPR021747 Protein of unknown function DUF3313 AL538_14075 feb9ce9ad01924f49b57eaadfb2ca06d 580 Gene3D G3DSA:3.90.550.10 6 217 1.1E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14075 feb9ce9ad01924f49b57eaadfb2ca06d 580 SUPERFAMILY SSF53448 14 243 7.31E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_14075 feb9ce9ad01924f49b57eaadfb2ca06d 580 Pfam PF00535 Glycosyl transferase family 2 14 134 6.3E-20 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AL538_14075 feb9ce9ad01924f49b57eaadfb2ca06d 580 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 353 569 1.6E-13 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_24270 6805bdc109a5ef0ea1de74c095aa69fc 189 Pfam PF05036 Sporulation related domain 99 171 6.1E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AL538_24270 6805bdc109a5ef0ea1de74c095aa69fc 189 SUPERFAMILY SSF110997 99 160 3.14E-7 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_24270 6805bdc109a5ef0ea1de74c095aa69fc 189 Gene3D G3DSA:3.30.70.1070 89 180 7.8E-21 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AL538_17875 defafe7dc564cb794e2b70209f463bd0 139 Gene3D G3DSA:3.10.180.10 2 131 3.0E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_17875 defafe7dc564cb794e2b70209f463bd0 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 9.5E-19 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_17875 defafe7dc564cb794e2b70209f463bd0 139 SUPERFAMILY SSF54593 3 129 2.15E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_17910 f870dc49c08a8cdb66f0742a27076aa2 531 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 7.0E-175 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_17910 f870dc49c08a8cdb66f0742a27076aa2 531 PIRSF PIRSF006446 352 526 1.8E-35 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_17910 f870dc49c08a8cdb66f0742a27076aa2 531 PIRSF PIRSF006446 1 329 2.0E-115 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_05140 9fab67d340365e7fddd26dcb76b8f431 136 SUPERFAMILY SSF101116 6 127 5.75E-39 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 AL538_05140 9fab67d340365e7fddd26dcb76b8f431 136 Gene3D G3DSA:1.20.120.340 2 126 2.8E-39 T 11-10-2018 AL538_05140 9fab67d340365e7fddd26dcb76b8f431 136 PIRSF PIRSF039090 1 133 2.9E-42 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_05140 9fab67d340365e7fddd26dcb76b8f431 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 2.4E-23 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_05140 9fab67d340365e7fddd26dcb76b8f431 136 Pfam PF02561 Flagellar protein FliS 6 122 4.2E-37 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 AL538_01020 9ee72464f4a5f5bfb76854acf75be4d2 159 Gene3D G3DSA:3.40.190.10 39 158 1.7E-6 T 11-10-2018 AL538_01020 9ee72464f4a5f5bfb76854acf75be4d2 159 SUPERFAMILY SSF53850 34 156 6.24E-9 T 11-10-2018 AL538_17155 c9a1df9cfb15212dc700abd4618d65e8 394 Gene3D G3DSA:3.40.50.2000 172 353 1.7E-60 T 11-10-2018 AL538_17155 c9a1df9cfb15212dc700abd4618d65e8 394 Gene3D G3DSA:3.40.50.2000 19 363 1.7E-60 T 11-10-2018 AL538_17155 c9a1df9cfb15212dc700abd4618d65e8 394 Pfam PF00534 Glycosyl transferases group 1 185 347 7.7E-31 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_17155 c9a1df9cfb15212dc700abd4618d65e8 394 SUPERFAMILY SSF53756 7 368 2.06E-67 T 11-10-2018 AL538_17155 c9a1df9cfb15212dc700abd4618d65e8 394 Pfam PF13439 Glycosyltransferase Family 4 19 175 2.1E-15 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AL538_04705 7c4f7ea0ad62c406ba7fd704f9683523 98 Gene3D G3DSA:1.10.3990.20 8 97 1.3E-31 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily AL538_04705 7c4f7ea0ad62c406ba7fd704f9683523 98 Pfam PF13467 Ribbon-helix-helix domain 16 82 9.9E-24 T 11-10-2018 IPR027373 Ribbon-helix-helix domain AL538_21715 4753c8c84da56ac270419e6a70715d57 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 336 2.1E-37 T 11-10-2018 IPR000160 GGDEF domain AL538_21715 4753c8c84da56ac270419e6a70715d57 338 SUPERFAMILY SSF55073 192 336 8.63E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AL538_21715 4753c8c84da56ac270419e6a70715d57 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 336 2.8E-33 T 11-10-2018 IPR000160 GGDEF domain AL538_21715 4753c8c84da56ac270419e6a70715d57 338 Gene3D G3DSA:3.30.70.270 180 338 1.7E-42 T 11-10-2018 AL538_21715 4753c8c84da56ac270419e6a70715d57 338 SMART SM00267 176 337 1.2E-41 T 11-10-2018 IPR000160 GGDEF domain AL538_03090 f16ac05af46aa9f690cfe27b91a1784f 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 3.6E-135 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_03090 f16ac05af46aa9f690cfe27b91a1784f 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 9.1E-173 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_03090 f16ac05af46aa9f690cfe27b91a1784f 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 11-10-2018 IPR018093 BCCT transporter, conserved site AL538_20485 28f7d67c3afac93d8ba87d7722b1136a 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.9E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_20485 28f7d67c3afac93d8ba87d7722b1136a 134 Gene3D G3DSA:3.30.420.270 61 129 4.0E-11 T 11-10-2018 AL538_20850 843cd980c6a546c85feefca0b0bc6c11 419 Gene3D G3DSA:3.40.50.1110 134 415 3.9E-39 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AL538_20850 843cd980c6a546c85feefca0b0bc6c11 419 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 148 406 2.7E-18 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 AL538_20850 843cd980c6a546c85feefca0b0bc6c11 419 SUPERFAMILY SSF52266 147 411 2.5E-23 T 11-10-2018 AL538_20850 843cd980c6a546c85feefca0b0bc6c11 419 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 148 159 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AL538_15275 29d98fca2f3af0fc357c34da978ca406 137 Pfam PF09621 Type III secretion system regulator (LcrR) 5 137 5.6E-56 T 11-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AL538_15275 29d98fca2f3af0fc357c34da978ca406 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 2 137 7.3E-58 T 11-10-2018 IPR013405 Type III secretion system regulator, LcrR AL538_10965 def755650bc905de2563d628014b28df 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.4E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AL538_10965 def755650bc905de2563d628014b28df 206 Gene3D G3DSA:1.10.287.460 4 67 2.8E-19 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 AL538_10965 def755650bc905de2563d628014b28df 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 5.1E-24 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AL538_10965 def755650bc905de2563d628014b28df 206 SUPERFAMILY SSF54534 7 205 5.11E-54 T 11-10-2018 AL538_10965 def755650bc905de2563d628014b28df 206 Gene3D G3DSA:3.10.50.40 68 206 7.3E-50 T 11-10-2018 AL538_16535 d6e0fedba927ebce2e43e557713b9957 210 SUPERFAMILY SSF51735 1 207 6.82E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_16535 d6e0fedba927ebce2e43e557713b9957 210 Pfam PF13460 NAD(P)H-binding 8 194 1.5E-32 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_16535 d6e0fedba927ebce2e43e557713b9957 210 Gene3D G3DSA:3.40.50.720 1 209 3.7E-38 T 11-10-2018 AL538_24935 fcf3857039c9ff0494da7c9a14b569f0 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 15 145 6.2E-40 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_24935 fcf3857039c9ff0494da7c9a14b569f0 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 148 8.7E-49 T 11-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN AL538_24935 fcf3857039c9ff0494da7c9a14b569f0 151 Gene3D G3DSA:2.60.40.4150 26 151 1.3E-38 T 11-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily AL538_16190 4d29f38766ab57eb47e4d93203f5a4b6 139 Gene3D G3DSA:3.10.450.40 74 129 1.2E-5 T 11-10-2018 AL538_16525 38f3349f7c8803e0921ba134b1017cde 200 SMART SM00702 11 187 3.7E-35 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AL538_16525 38f3349f7c8803e0921ba134b1017cde 200 Gene3D G3DSA:2.60.120.620 1 189 3.7E-52 T 11-10-2018 AL538_16525 38f3349f7c8803e0921ba134b1017cde 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 3.4E-21 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Pfam PF13431 Tetratricopeptide repeat 111 142 5.3E-5 T 11-10-2018 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Pfam PF14559 Tetratricopeptide repeat 228 277 9.6E-6 T 11-10-2018 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SUPERFAMILY SSF48452 176 315 5.97E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Gene3D G3DSA:1.25.40.10 168 276 2.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SMART SM00028 122 155 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SMART SM00028 280 313 1.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SMART SM00028 88 121 42.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SMART SM00028 216 249 6.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SMART SM00028 182 215 1.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 SUPERFAMILY SSF48452 49 154 6.83E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Gene3D G3DSA:1.25.40.10 29 162 3.7E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Pfam PF00515 Tetratricopeptide repeat 280 313 1.2E-6 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AL538_05960 42b030eea1e34bfa05d22cac504c3533 337 Gene3D G3DSA:1.25.40.10 277 336 1.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_18995 5dd5a0b76bcb51ce386e9dbe219e5e1f 377 Gene3D G3DSA:2.40.370.10 255 377 8.1E-33 T 11-10-2018 IPR023374 AttH-like domain superfamily AL538_18995 5dd5a0b76bcb51ce386e9dbe219e5e1f 377 Gene3D G3DSA:2.40.370.10 60 253 2.3E-65 T 11-10-2018 IPR023374 AttH-like domain superfamily AL538_18995 5dd5a0b76bcb51ce386e9dbe219e5e1f 377 Pfam PF17186 Lipocalin-like domain 255 377 7.3E-42 T 11-10-2018 AL538_18995 5dd5a0b76bcb51ce386e9dbe219e5e1f 377 Pfam PF07143 CrtC N-terminal lipocalin domain 72 250 1.1E-54 T 11-10-2018 IPR010791 AttH domain AL538_18995 5dd5a0b76bcb51ce386e9dbe219e5e1f 377 SUPERFAMILY SSF159245 49 377 4.84E-104 T 11-10-2018 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 Pfam PF02096 60Kd inner membrane protein 351 530 9.6E-64 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.2E-110 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 Pfam PF14849 YidC periplasmic domain 65 339 4.3E-83 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 2.3E-99 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 Gene3D G3DSA:2.70.98.90 61 330 3.0E-89 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.971 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AL538_09660 a9bd20ddfebec3cef1fa960253cf5224 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 8.5E-74 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_25135 9e76ed7177349cf73e8ff87a8453bc1c 439 Pfam PF01551 Peptidase family M23 297 390 9.8E-30 T 11-10-2018 IPR016047 Peptidase M23 AL538_25135 9e76ed7177349cf73e8ff87a8453bc1c 439 SUPERFAMILY SSF51261 144 392 4.76E-63 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_25135 9e76ed7177349cf73e8ff87a8453bc1c 439 Gene3D G3DSA:2.70.70.10 266 397 3.6E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_25135 9e76ed7177349cf73e8ff87a8453bc1c 439 Gene3D G3DSA:3.10.450.350 161 265 8.5E-36 T 11-10-2018 AL538_25135 9e76ed7177349cf73e8ff87a8453bc1c 439 Gene3D G3DSA:3.10.450.350 67 160 1.1E-27 T 11-10-2018 AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 SUPERFAMILY SSF53383 9 371 1.89E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 Pfam PF00266 Aminotransferase class-V 13 340 9.3E-37 T 11-10-2018 IPR000192 Aminotransferase class V domain AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 PIRSF PIRSF000524 5 373 4.7E-110 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 Gene3D G3DSA:3.40.640.10 22 269 5.8E-144 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_07585 76d58ac9e8d2beea3ab1976eb03a140d 373 Gene3D G3DSA:3.90.1150.10 9 371 5.8E-144 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 Gene3D G3DSA:3.40.190.10 163 263 3.3E-71 T 11-10-2018 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 SUPERFAMILY SSF53850 89 294 4.81E-50 T 11-10-2018 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 SUPERFAMILY SSF46785 7 112 8.18E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.7E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 Gene3D G3DSA:3.40.190.10 92 289 3.3E-71 T 11-10-2018 AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 Pfam PF03466 LysR substrate binding domain 88 292 2.3E-49 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_20810 5d3f0e8f45228aabba27621356b2e0e6 302 Gene3D G3DSA:1.10.10.10 3 91 9.4E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16085 a78c845c0048f59b327eba4e223045d8 569 SUPERFAMILY SSF161098 302 541 4.69E-25 T 11-10-2018 IPR035906 MetI-like superfamily AL538_16085 a78c845c0048f59b327eba4e223045d8 569 SUPERFAMILY SSF161098 5 276 4.14E-24 T 11-10-2018 IPR035906 MetI-like superfamily AL538_16085 a78c845c0048f59b327eba4e223045d8 569 Gene3D G3DSA:1.10.3720.10 3 281 1.4E-18 T 11-10-2018 IPR035906 MetI-like superfamily AL538_16085 a78c845c0048f59b327eba4e223045d8 569 Gene3D G3DSA:1.10.3720.10 301 549 2.0E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_18805 a5193c308c252cb43875fb41a3c30dc3 446 PIRSF PIRSF006603 2 446 1.2E-68 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_18805 a5193c308c252cb43875fb41a3c30dc3 446 Pfam PF01554 MatE 247 404 5.3E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_18805 a5193c308c252cb43875fb41a3c30dc3 446 Pfam PF01554 MatE 19 179 7.8E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_18805 a5193c308c252cb43875fb41a3c30dc3 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 2.3E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_19505 d676a395ad7f4443c9410be0dcabae50 236 Pfam PF00246 Zinc carboxypeptidase 14 156 1.9E-9 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL538_19505 d676a395ad7f4443c9410be0dcabae50 236 SUPERFAMILY SSF53187 13 213 1.65E-27 T 11-10-2018 AL538_19505 d676a395ad7f4443c9410be0dcabae50 236 Gene3D G3DSA:3.40.630.10 1 236 2.6E-59 T 11-10-2018 AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 Pfam PF03466 LysR substrate binding domain 96 276 2.8E-11 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 SUPERFAMILY SSF46785 4 85 1.26E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 Gene3D G3DSA:3.40.190.290 91 281 1.4E-6 T 11-10-2018 AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 SUPERFAMILY SSF53850 90 280 1.25E-17 T 11-10-2018 AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 Gene3D G3DSA:1.10.10.10 4 68 8.2E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_11715 fd28c7aa5a29878a6c62198c09e5ee61 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.0E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17815 8fbbb6e1fd82888dd985ded5b7b71ebd 181 Gene3D G3DSA:1.10.357.10 1 180 1.5E-21 T 11-10-2018 AL538_17815 8fbbb6e1fd82888dd985ded5b7b71ebd 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 60 3.4E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_17815 8fbbb6e1fd82888dd985ded5b7b71ebd 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_17815 8fbbb6e1fd82888dd985ded5b7b71ebd 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.4E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_17815 8fbbb6e1fd82888dd985ded5b7b71ebd 181 SUPERFAMILY SSF46689 3 74 1.08E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_01280 0384baf51c8c8deaa82d785b0d1c5986 552 Pfam PF07603 Protein of unknown function (DUF1566) 281 393 3.5E-21 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AL538_01280 0384baf51c8c8deaa82d785b0d1c5986 552 Pfam PF07603 Protein of unknown function (DUF1566) 411 550 1.8E-21 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 AL538_01280 0384baf51c8c8deaa82d785b0d1c5986 552 Pfam PF00034 Cytochrome c 144 221 3.0E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_01280 0384baf51c8c8deaa82d785b0d1c5986 552 SUPERFAMILY SSF46626 124 224 8.05E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_01280 0384baf51c8c8deaa82d785b0d1c5986 552 Gene3D G3DSA:1.10.760.10 133 224 2.1E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 Pfam PF01553 Acyltransferase 289 424 1.4E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 PIRSF PIRSF500064 2 808 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.518 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 PIRSF PIRSF000437 19 808 0.0 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 SUPERFAMILY SSF69593 240 489 9.02E-25 T 11-10-2018 AL538_08950 e9bb311b675c2c760f73cc7cbd9ab1d3 808 SMART SM00563 300 427 5.7E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_01265 8952e71296f5b59215dcbbfefc57a0e2 332 Gene3D G3DSA:2.40.160.10 28 332 1.2E-26 T 11-10-2018 IPR023614 Porin domain superfamily AL538_01265 8952e71296f5b59215dcbbfefc57a0e2 332 Pfam PF13609 Gram-negative porin 13 306 2.0E-21 T 11-10-2018 AL538_01265 8952e71296f5b59215dcbbfefc57a0e2 332 SUPERFAMILY SSF56935 48 332 1.59E-20 T 11-10-2018 AL538_22075 d87702b206f252ed0a87d111da3e9b9b 435 Pfam PF01943 Polysaccharide biosynthesis protein 27 296 6.8E-10 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AL538_22075 d87702b206f252ed0a87d111da3e9b9b 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 350 431 4.1E-8 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AL538_10500 4e7345a4c9d93a1072e773cc172cf08f 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 4.1E-72 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_10500 4e7345a4c9d93a1072e773cc172cf08f 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.644 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_10500 4e7345a4c9d93a1072e773cc172cf08f 316 PIRSF PIRSF026649 6 312 1.7E-78 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_10500 4e7345a4c9d93a1072e773cc172cf08f 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 6.3E-131 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_04730 9ae6cd716c119cfc35898e6350c4142e 220 Gene3D G3DSA:2.60.40.2130 11 179 2.6E-48 T 11-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_04730 9ae6cd716c119cfc35898e6350c4142e 220 Pfam PF06468 Spondin_N 23 196 1.9E-51 T 11-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_18905 b2c90d2fe138d399343eeb05d3b134b9 154 Pfam PF05932 Tir chaperone protein (CesT) family 11 128 2.1E-11 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_18905 b2c90d2fe138d399343eeb05d3b134b9 154 SUPERFAMILY SSF69635 6 133 1.19E-15 T 11-10-2018 AL538_18905 b2c90d2fe138d399343eeb05d3b134b9 154 Gene3D G3DSA:3.30.1460.10 4 134 1.3E-22 T 11-10-2018 AL538_27765 a75b6b3aaa85b6603ad5ea87712e0cfc 48 Pfam PF11665 Protein of unknown function (DUF3265) 21 48 1.1E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_01790 f43fdedb8180041e3096b71b2e5a3732 323 Gene3D G3DSA:3.30.1780.10 5 317 2.0E-81 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AL538_01790 f43fdedb8180041e3096b71b2e5a3732 323 PIRSF PIRSF001439 1 319 2.6E-67 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL538_01790 f43fdedb8180041e3096b71b2e5a3732 323 SUPERFAMILY SSF51735 1 316 3.84E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_01790 f43fdedb8180041e3096b71b2e5a3732 323 Gene3D G3DSA:3.40.50.720 119 302 2.0E-81 T 11-10-2018 AL538_01790 f43fdedb8180041e3096b71b2e5a3732 323 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 315 9.2E-52 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AL538_09670 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_09670 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_09670 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_09670 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AL538_09670 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 879 0.0 T 11-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 737 751 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 704 722 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 630 648 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 797 872 1.9E-13 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Gene3D G3DSA:3.40.50.300 579 794 1.3E-69 T 11-10-2018 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SMART SM01086 797 887 5.6E-11 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Pfam PF07724 AAA domain (Cdc48 subfamily) 626 790 1.1E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Gene3D G3DSA:3.40.50.300 359 573 1.5E-48 T 11-10-2018 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Gene3D G3DSA:1.10.1780.10 5 160 1.6E-36 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SUPERFAMILY SSF52540 175 527 2.4E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SUPERFAMILY SSF52540 575 876 3.0E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SUPERFAMILY SSF81923 18 125 5.69E-11 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Gene3D G3DSA:3.40.50.300 162 357 9.9E-63 T 11-10-2018 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.4E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 Gene3D G3DSA:1.10.8.60 797 890 6.7E-14 T 11-10-2018 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 660 678 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SMART SM00382 626 785 8.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23315 1de96b0378c79cb7eabe416009bd6ae5 892 SMART SM00382 213 358 3.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 Gene3D G3DSA:1.10.10.10 3 89 4.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 Pfam PF03466 LysR substrate binding domain 91 293 5.5E-31 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 Gene3D G3DSA:3.40.190.290 92 292 2.1E-47 T 11-10-2018 AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 SUPERFAMILY SSF53850 91 296 1.07E-35 T 11-10-2018 AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26850 77a38987ee8723b6bbe09419f055f32b 300 SUPERFAMILY SSF46785 4 107 2.4E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_21555 49198ed69cb67bfbce200e41b8e12e10 2511 SUPERFAMILY SSF55874 19 126 8.6E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AL538_24210 2299fd7bdc5e0b500d746fd8d1cad332 233 SMART SM00382 39 228 7.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_24210 2299fd7bdc5e0b500d746fd8d1cad332 233 SUPERFAMILY SSF52540 12 228 2.08E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24210 2299fd7bdc5e0b500d746fd8d1cad332 233 Gene3D G3DSA:3.40.50.300 9 230 2.4E-70 T 11-10-2018 AL538_24210 2299fd7bdc5e0b500d746fd8d1cad332 233 Pfam PF00005 ABC transporter 30 176 8.6E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_24210 2299fd7bdc5e0b500d746fd8d1cad332 233 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_22780 4e07740c1a4a0943885f952a22f6332c 119 SUPERFAMILY SSF52833 41 118 1.37E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_22780 4e07740c1a4a0943885f952a22f6332c 119 Gene3D G3DSA:3.40.30.10 20 118 2.9E-14 T 11-10-2018 AL538_22780 4e07740c1a4a0943885f952a22f6332c 119 Pfam PF00462 Glutaredoxin 43 96 3.2E-12 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 Pfam PF08447 PAS fold 31 114 1.0E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 SMART SM00283 257 518 6.4E-48 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 Gene3D G3DSA:3.30.450.20 2 119 8.9E-24 T 11-10-2018 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 SUPERFAMILY SSF55785 17 114 2.62E-26 T 11-10-2018 IPR035965 PAS domain superfamily AL538_26150 13722142cc4f8e45e130ee739f801b15 520 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 109 1.0E-12 T 11-10-2018 IPR000014 PAS domain AL538_26150 13722142cc4f8e45e130ee739f801b15 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 484 9.0E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 SUPERFAMILY SSF58104 263 517 7.98E-59 T 11-10-2018 AL538_26150 13722142cc4f8e45e130ee739f801b15 520 SMART SM00091 8 75 3.7E-5 T 11-10-2018 IPR000014 PAS domain AL538_26150 13722142cc4f8e45e130ee739f801b15 520 Gene3D G3DSA:1.10.287.950 202 518 6.9E-56 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.2E-13 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.2E-13 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.2E-13 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.2E-13 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 7.9E-62 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 Gene3D G3DSA:3.50.50.100 1 406 5.3E-114 T 11-10-2018 AL538_14555 edcb579b98693322e2745ac3ef917348 429 SUPERFAMILY SSF51905 3 347 3.57E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_08025 1fda4368fdf62368a05a053db07f4000 358 SUPERFAMILY SSF56935 39 344 3.33E-19 T 11-10-2018 AL538_06330 8559aa1bdbf87c190305fe64fd755df0 296 Gene3D G3DSA:3.30.420.40 115 261 5.4E-66 T 11-10-2018 AL538_06330 8559aa1bdbf87c190305fe64fd755df0 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.1E-43 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 AL538_06330 8559aa1bdbf87c190305fe64fd755df0 296 SUPERFAMILY SSF53067 114 283 1.65E-42 T 11-10-2018 AL538_06330 8559aa1bdbf87c190305fe64fd755df0 296 SUPERFAMILY SSF53067 1 111 7.23E-25 T 11-10-2018 AL538_06330 8559aa1bdbf87c190305fe64fd755df0 296 Gene3D G3DSA:3.30.420.40 4 114 5.4E-66 T 11-10-2018 AL538_22335 0e87ddeefe62ff84e12525397c06b6cb 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 496 1.7E-100 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_23200 eae393c091ec0924bb36b47fb022c0cb 215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 148 215 1.6E-4 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AL538_23200 eae393c091ec0924bb36b47fb022c0cb 215 SUPERFAMILY SSF56925 19 215 2.43E-23 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_23200 eae393c091ec0924bb36b47fb022c0cb 215 Pfam PF13505 Outer membrane protein beta-barrel domain 6 215 6.3E-17 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_23200 eae393c091ec0924bb36b47fb022c0cb 215 Gene3D G3DSA:2.40.160.20 17 215 2.9E-22 T 11-10-2018 AL538_05975 52edc0f95046faf017713226f83f6409 481 SMART SM00382 254 479 0.0018 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_05975 52edc0f95046faf017713226f83f6409 481 Gene3D G3DSA:3.40.50.300 226 450 3.4E-71 T 11-10-2018 AL538_05975 52edc0f95046faf017713226f83f6409 481 SUPERFAMILY SSF52540 113 445 1.51E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05975 52edc0f95046faf017713226f83f6409 481 Pfam PF00437 Type II/IV secretion system protein 130 407 1.4E-82 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_05975 52edc0f95046faf017713226f83f6409 481 Gene3D G3DSA:3.30.450.380 9 225 1.4E-42 T 11-10-2018 AL538_09960 e876ed76006efddaa9df6cfe9379125e 125 SUPERFAMILY SSF103481 6 108 1.24E-15 T 11-10-2018 AL538_09960 e876ed76006efddaa9df6cfe9379125e 125 Pfam PF00893 Small Multidrug Resistance protein 6 94 4.9E-21 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL538_09960 e876ed76006efddaa9df6cfe9379125e 125 Gene3D G3DSA:1.10.3730.20 4 109 1.1E-28 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.081 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 SUPERFAMILY SSF54211 257 456 4.17E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 Pfam PF13481 AAA domain 85 224 1.4E-12 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.3E-225 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 Gene3D G3DSA:3.30.230.10 314 458 1.1E-21 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 SUPERFAMILY SSF52540 70 294 6.52E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 11-10-2018 AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 SMART SM00382 93 246 3.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06040 9a9b0d3037a4b00ca1ccdbccea620c53 459 Gene3D G3DSA:3.40.50.300 68 280 4.0E-38 T 11-10-2018 AL538_12825 ae618b66d22cf2ce6105c9d81aca279c 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 3.9E-230 T 11-10-2018 IPR010520 UPF0255 family AL538_12825 ae618b66d22cf2ce6105c9d81aca279c 415 SUPERFAMILY SSF53474 47 410 9.05E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_12825 ae618b66d22cf2ce6105c9d81aca279c 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.331 T 11-10-2018 IPR010520 UPF0255 family AL538_12825 ae618b66d22cf2ce6105c9d81aca279c 415 Gene3D G3DSA:3.40.50.1820 18 415 6.9E-110 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_24880 def01580ef50b66ca77e1bbdbc08a942 154 SUPERFAMILY SSF160719 32 142 9.68E-8 T 11-10-2018 AL538_24880 def01580ef50b66ca77e1bbdbc08a942 154 Pfam PF04965 Gene 25-like lysozyme 33 127 2.2E-15 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL538_24880 def01580ef50b66ca77e1bbdbc08a942 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 8.9E-31 T 11-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 Gene3D G3DSA:3.40.190.10 98 277 4.5E-38 T 11-10-2018 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 SUPERFAMILY SSF53850 90 284 9.05E-18 T 11-10-2018 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 Gene3D G3DSA:1.10.10.10 1 92 7.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 SUPERFAMILY SSF46785 3 81 1.55E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 Gene3D G3DSA:3.40.190.10 158 251 4.5E-38 T 11-10-2018 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 Pfam PF03466 LysR substrate binding domain 87 281 9.9E-15 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_17790 bfbea9c0bf109b3450d7d4f05c91f091 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_10085 e35c89fa6a78b5c680e14ce37e6a1733 510 Pfam PF02646 RmuC family 181 477 4.0E-106 T 11-10-2018 IPR003798 DNA recombination RmuC AL538_05970 21c84c05e94aa6feaf334b4bb9645fa6 320 Gene3D G3DSA:1.20.81.30 141 256 1.5E-7 T 11-10-2018 AL538_05970 21c84c05e94aa6feaf334b4bb9645fa6 320 Pfam PF00482 Type II secretion system (T2SS), protein F 153 275 1.5E-17 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_09520 8bf2288c892b4bb4429676d179e432aa 318 SUPERFAMILY SSF56935 27 318 3.66E-7 T 11-10-2018 AL538_09520 8bf2288c892b4bb4429676d179e432aa 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 6.0E-112 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL538_09520 8bf2288c892b4bb4429676d179e432aa 318 PIRSF PIRSF028696 1 318 1.4E-123 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 AL538_08075 92b4a22b9aea7d43606ee00d66f843f3 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 2.8E-23 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 161 2.3E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 Gene3D G3DSA:2.40.170.20 172 653 2.8E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 Pfam PF00593 TonB dependent receptor 272 651 1.4E-59 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 Gene3D G3DSA:2.170.130.10 34 165 1.1E-41 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 636 653 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_14180 0d88e1abef0434877e986d0ab6b0f491 653 SUPERFAMILY SSF56935 37 653 1.08E-131 T 11-10-2018 AL538_21705 a027ee47da562b81e013f59967010504 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 3.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 3.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 3.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 Gene3D G3DSA:1.10.10.10 155 216 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_21705 a027ee47da562b81e013f59967010504 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 3.1E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 Gene3D G3DSA:3.40.50.2300 9 143 4.6E-24 T 11-10-2018 AL538_21705 a027ee47da562b81e013f59967010504 217 SUPERFAMILY SSF46894 151 214 6.12E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 SMART SM00421 155 212 3.6E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21705 a027ee47da562b81e013f59967010504 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_05945 4258793052d3c521af6bd17e7121d39c 151 Pfam PF07811 TadE-like protein 10 52 2.0E-10 T 11-10-2018 IPR012495 TadE-like AL538_17375 f2fa75cd8b17004a59e68e611737fee4 296 SUPERFAMILY SSF103481 221 294 2.62E-7 T 11-10-2018 AL538_17375 f2fa75cd8b17004a59e68e611737fee4 296 Pfam PF00892 EamA-like transporter family 152 295 2.5E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_17375 f2fa75cd8b17004a59e68e611737fee4 296 Pfam PF00892 EamA-like transporter family 4 139 1.6E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_17375 f2fa75cd8b17004a59e68e611737fee4 296 SUPERFAMILY SSF103481 42 142 4.58E-9 T 11-10-2018 AL538_05545 ed66995d85f3545fba2fa7e086b72277 287 Gene3D G3DSA:3.60.15.10 4 285 9.7E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_05545 ed66995d85f3545fba2fa7e086b72277 287 Pfam PF00753 Metallo-beta-lactamase superfamily 35 121 2.2E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_05545 ed66995d85f3545fba2fa7e086b72277 287 SUPERFAMILY SSF56281 31 274 3.67E-23 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_05545 ed66995d85f3545fba2fa7e086b72277 287 SMART SM00849 34 272 2.4E-4 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_26680 2f0ca5e7cfde53d6ae342263083da08c 188 Gene3D G3DSA:2.60.40.420 64 188 2.5E-18 T 11-10-2018 IPR008972 Cupredoxin AL538_26680 2f0ca5e7cfde53d6ae342263083da08c 188 SUPERFAMILY SSF49503 78 186 1.49E-20 T 11-10-2018 IPR008972 Cupredoxin AL538_25325 6a3edd2a67761f5365b6e05b02126d02 106 Gene3D G3DSA:3.30.70.1240 1 104 5.2E-30 T 11-10-2018 IPR023389 DOPA-like superfamily AL538_25325 6a3edd2a67761f5365b6e05b02126d02 106 SUPERFAMILY SSF143410 1 102 1.7E-34 T 11-10-2018 IPR023389 DOPA-like superfamily AL538_25325 6a3edd2a67761f5365b6e05b02126d02 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 2.7E-28 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase AL538_25325 6a3edd2a67761f5365b6e05b02126d02 106 PIRSF PIRSF028139 1 106 6.1E-41 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase AL538_03140 13e249b268d67fe589ed2d77eb1c725e 182 SUPERFAMILY SSF55166 66 182 4.45E-33 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_03140 13e249b268d67fe589ed2d77eb1c725e 182 Gene3D G3DSA:3.30.1380.10 68 182 5.2E-11 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_03140 13e249b268d67fe589ed2d77eb1c725e 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 35 182 1.7E-67 T 11-10-2018 IPR010275 Protein of unknown function DUF882 AL538_03140 13e249b268d67fe589ed2d77eb1c725e 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 31 2.9E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_04335 02f350e8bd7a2c4f6a8a79a51f607b0a 343 Gene3D G3DSA:3.40.190.10 111 281 1.1E-52 T 11-10-2018 AL538_04335 02f350e8bd7a2c4f6a8a79a51f607b0a 343 Pfam PF12849 PBP superfamily domain 18 299 2.8E-41 T 11-10-2018 IPR024370 PBP domain AL538_04335 02f350e8bd7a2c4f6a8a79a51f607b0a 343 SUPERFAMILY SSF53850 25 337 4.34E-69 T 11-10-2018 AL538_04335 02f350e8bd7a2c4f6a8a79a51f607b0a 343 Gene3D G3DSA:3.40.190.10 26 308 1.1E-52 T 11-10-2018 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 485 4.2E-158 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Gene3D G3DSA:3.30.870.10 316 459 3.2E-24 T 11-10-2018 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 SMART SM00155 398 425 6.0E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 SMART SM00155 219 246 4.0E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Gene3D G3DSA:3.30.870.10 116 308 3.7E-38 T 11-10-2018 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 SUPERFAMILY SSF56024 68 314 8.97E-50 T 11-10-2018 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 SUPERFAMILY SSF56024 273 470 1.68E-46 T 11-10-2018 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 485 49.881 T 11-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Pfam PF13091 PLD-like domain 328 445 1.8E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Pfam PF13091 PLD-like domain 134 269 2.8E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_16035 10d4e2b059f9a54d66b3514b349d37d3 485 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 4.6E-7 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 156 196 2.4E-7 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 3.9E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 Gene3D G3DSA:1.10.10.60 1 56 4.4E-20 T 11-10-2018 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 SUPERFAMILY SSF46689 4 79 2.26E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 Gene3D G3DSA:1.10.357.10 58 198 2.4E-28 T 11-10-2018 AL538_18250 2f6c35db41232f4268e61976a52c03a2 198 SUPERFAMILY SSF48498 80 196 7.12E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_16580 688bc2db1cc5425997d493195e7f009a 658 Gene3D G3DSA:1.10.3470.10 344 658 3.7E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_16580 688bc2db1cc5425997d493195e7f009a 658 Gene3D G3DSA:1.10.3470.10 2 329 2.7E-73 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_16580 688bc2db1cc5425997d493195e7f009a 658 SUPERFAMILY SSF81345 6 323 1.11E-58 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_16580 688bc2db1cc5425997d493195e7f009a 658 Pfam PF01032 FecCD transport family 355 657 1.8E-75 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_16580 688bc2db1cc5425997d493195e7f009a 658 Pfam PF01032 FecCD transport family 8 321 2.8E-69 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_16580 688bc2db1cc5425997d493195e7f009a 658 SUPERFAMILY SSF81345 350 657 1.44E-68 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 Pfam PF00005 ABC transporter 24 187 1.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 SMART SM00382 32 238 1.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 SUPERFAMILY SSF52540 3 269 7.99E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 5.3E-21 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.8E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AL538_15960 d970a62f58408eaf5fe6639e3a87ef37 331 Gene3D G3DSA:3.40.50.300 2 331 5.1E-74 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 101 181 5.7E-16 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 395 444 2.1E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 298 350 1.3E-12 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 494 537 7.6E-5 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 589 632 3.2E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 104 150 9.9E-5 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF10531 SLBB domain 211 252 7.2E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 199 287 1.3E-17 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 578 670 2.6E-17 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 288 377 1.8E-14 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 385 472 8.8E-15 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.10.560.10 481 575 1.1E-16 T 11-10-2018 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 90 2.1E-10 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AL538_00025 9f481a9d492746af0326d48558d1af0f 699 Gene3D G3DSA:3.30.1950.10 42 100 5.7E-16 T 11-10-2018 AL538_26915 5002a0be785707cbc9fc60b888eafeea 187 Gene3D G3DSA:1.10.3210.10 2 186 3.4E-44 T 11-10-2018 AL538_26915 5002a0be785707cbc9fc60b888eafeea 187 SUPERFAMILY SSF109604 7 179 3.84E-36 T 11-10-2018 AL538_26915 5002a0be785707cbc9fc60b888eafeea 187 Pfam PF13023 HD domain 15 171 1.3E-39 T 11-10-2018 IPR006674 HD domain AL538_24610 8fedfbdcce4fe05798068056a019be43 162 Gene3D G3DSA:3.40.50.1010 1 162 1.1E-62 T 11-10-2018 AL538_24610 8fedfbdcce4fe05798068056a019be43 162 Pfam PF01936 NYN domain 8 156 2.1E-39 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AL538_18800 07064771fd1598dae6d9fb1c83e72344 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 8.9E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_18800 07064771fd1598dae6d9fb1c83e72344 559 SUPERFAMILY SSF55120 350 556 3.04E-55 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_18800 07064771fd1598dae6d9fb1c83e72344 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AL538_18800 07064771fd1598dae6d9fb1c83e72344 559 Gene3D G3DSA:3.30.2350.10 347 559 1.3E-58 T 11-10-2018 AL538_10380 502b8e300cc8473e9d0c380e03bfd923 227 Gene3D G3DSA:3.40.1280.10 1 204 1.1E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL538_10380 502b8e300cc8473e9d0c380e03bfd923 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.2E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AL538_10380 502b8e300cc8473e9d0c380e03bfd923 227 SUPERFAMILY SSF75217 4 173 1.77E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AL538_10380 502b8e300cc8473e9d0c380e03bfd923 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 1.3E-24 T 11-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 AL538_10380 502b8e300cc8473e9d0c380e03bfd923 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.85 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 AL538_02690 ebfe95b2e0bafed56e7f431637d43680 107 SUPERFAMILY SSF102705 2 103 1.53E-10 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AL538_02690 ebfe95b2e0bafed56e7f431637d43680 107 Gene3D G3DSA:3.30.70.120 1 104 2.4E-18 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_00655 9abf9772b80a6c88b40e4fd416886e18 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 2.6E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_00655 9abf9772b80a6c88b40e4fd416886e18 67 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 32 5.1E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_00655 9abf9772b80a6c88b40e4fd416886e18 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 2.3E-33 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL538_00655 9abf9772b80a6c88b40e4fd416886e18 67 PIRSF PIRSF036704 1 67 3.0E-35 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 Pfam PF00571 CBS domain 73 127 9.4E-13 T 11-10-2018 IPR000644 CBS domain AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 Pfam PF00571 CBS domain 6 61 5.9E-7 T 11-10-2018 IPR000644 CBS domain AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 SUPERFAMILY SSF54631 1 127 1.77E-30 T 11-10-2018 AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 Gene3D G3DSA:3.10.580.10 1 129 1.0E-29 T 11-10-2018 AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 SMART SM00116 13 61 0.098 T 11-10-2018 IPR000644 CBS domain AL538_14495 56f6b5046bb82e3b0f15eccd436555b6 139 SMART SM00116 80 128 4.9E-9 T 11-10-2018 IPR000644 CBS domain AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 Pfam PF00106 short chain dehydrogenase 3 190 2.9E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.8E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 SUPERFAMILY SSF51735 3 229 1.47E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_04610 56cd3c6aca97d3dadde1de8f7e621626 229 Gene3D G3DSA:3.40.50.720 1 229 2.6E-65 T 11-10-2018 AL538_23080 66971003ea96675a2b4804d18c84abad 515 Pfam PF00884 Sulfatase 31 356 1.8E-61 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_23080 66971003ea96675a2b4804d18c84abad 515 Gene3D G3DSA:3.40.720.10 31 397 1.7E-99 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_23080 66971003ea96675a2b4804d18c84abad 515 Gene3D G3DSA:3.30.1120.10 398 461 1.7E-99 T 11-10-2018 AL538_23080 66971003ea96675a2b4804d18c84abad 515 SUPERFAMILY SSF53649 27 507 2.18E-125 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_19160 f8557ac6ee177f1f1e525e0da13ea9a3 329 Pfam PF01497 Periplasmic binding protein 54 298 9.1E-23 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AL538_19160 f8557ac6ee177f1f1e525e0da13ea9a3 329 Gene3D G3DSA:3.40.50.1980 150 323 1.4E-49 T 11-10-2018 AL538_19160 f8557ac6ee177f1f1e525e0da13ea9a3 329 SUPERFAMILY SSF53807 44 322 1.45E-46 T 11-10-2018 AL538_19160 f8557ac6ee177f1f1e525e0da13ea9a3 329 Gene3D G3DSA:3.40.50.1980 24 145 8.5E-21 T 11-10-2018 AL538_10100 de3c6c66dddefabaa1693c84578e3f20 544 Pfam PF03109 ABC1 family 113 230 5.8E-36 T 11-10-2018 IPR004147 UbiB domain AL538_10100 de3c6c66dddefabaa1693c84578e3f20 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.47 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL538_10100 de3c6c66dddefabaa1693c84578e3f20 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 2.0E-175 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AL538_10100 de3c6c66dddefabaa1693c84578e3f20 544 SUPERFAMILY SSF56112 94 436 1.95E-45 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AL538_24600 91b6e6acd67920ca930e4266033a67b1 246 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 1.4E-88 T 11-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL538_24600 91b6e6acd67920ca930e4266033a67b1 246 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.0E-5 T 11-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 AL538_17080 c4d417bb916b4803c51fbe35ea6f0055 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.0E-33 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 SUPERFAMILY SSF53597 1 159 4.38E-57 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 PIRSF PIRSF000194 1 159 4.7E-62 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.9E-14 T 11-10-2018 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.9E-14 T 11-10-2018 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.9E-14 T 11-10-2018 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.9E-14 T 11-10-2018 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 Pfam PF00186 Dihydrofolate reductase 3 159 5.6E-61 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AL538_11180 49c72300e980a4c1861912f61cf96b4b 159 Gene3D G3DSA:3.40.430.10 1 159 1.6E-59 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AL538_26775 907fea4deb6f0b5dfda8b198d33b8379 372 Gene3D G3DSA:1.25.40.10 117 242 3.2E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_26775 907fea4deb6f0b5dfda8b198d33b8379 372 SUPERFAMILY SSF48452 128 348 5.45E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_26775 907fea4deb6f0b5dfda8b198d33b8379 372 Gene3D G3DSA:1.25.40.10 288 370 2.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_26775 907fea4deb6f0b5dfda8b198d33b8379 372 Pfam PF14559 Tetratricopeptide repeat 301 354 5.9E-6 T 11-10-2018 AL538_22405 e679750c384a32d5e546eacda50f26c0 618 Gene3D G3DSA:1.20.1250.20 6 415 3.6E-22 T 11-10-2018 AL538_22405 e679750c384a32d5e546eacda50f26c0 618 Pfam PF01553 Acyltransferase 435 563 5.0E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_22405 e679750c384a32d5e546eacda50f26c0 618 SUPERFAMILY SSF103473 6 420 4.05E-25 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_22405 e679750c384a32d5e546eacda50f26c0 618 SUPERFAMILY SSF69593 383 601 3.79E-29 T 11-10-2018 AL538_22405 e679750c384a32d5e546eacda50f26c0 618 Pfam PF07690 Major Facilitator Superfamily 39 379 6.2E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_22405 e679750c384a32d5e546eacda50f26c0 618 SMART SM00563 450 566 3.0E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_27760 add6ee114f46406e68a3936aad7267a3 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 3.8E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 Gene3D G3DSA:1.10.3860.10 3 405 2.1E-72 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 4.1E-13 T 11-10-2018 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 4.1E-13 T 11-10-2018 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 4.1E-13 T 11-10-2018 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 4.1E-13 T 11-10-2018 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 4.1E-13 T 11-10-2018 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 2.3E-66 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 SUPERFAMILY SSF118215 15 400 6.28E-98 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_18375 bccda603d7caf2dab924ec5816ce2e88 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.53 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AL538_13975 d535b941fe275cf17765729e26956f4d 425 SUPERFAMILY SSF116734 6 211 8.83E-36 T 11-10-2018 AL538_13975 d535b941fe275cf17765729e26956f4d 425 Gene3D G3DSA:3.90.220.20 23 164 1.5E-60 T 11-10-2018 AL538_13975 d535b941fe275cf17765729e26956f4d 425 SUPERFAMILY SSF116734 237 424 2.29E-28 T 11-10-2018 AL538_13975 d535b941fe275cf17765729e26956f4d 425 Pfam PF01420 Type I restriction modification DNA specificity domain 22 195 2.0E-19 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL538_13975 d535b941fe275cf17765729e26956f4d 425 Pfam PF01420 Type I restriction modification DNA specificity domain 245 411 5.5E-6 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AL538_13975 d535b941fe275cf17765729e26956f4d 425 Gene3D G3DSA:1.10.287.1120 165 423 1.5E-60 T 11-10-2018 AL538_13975 d535b941fe275cf17765729e26956f4d 425 Gene3D G3DSA:3.90.220.20 239 382 1.5E-60 T 11-10-2018 AL538_18090 8dbdb73de73cf678247e4542209b10df 147 Pfam PF06271 RDD family 6 141 3.9E-16 T 11-10-2018 IPR010432 RDD AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.8E-88 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 PIRSF PIRSF001359 13 358 5.0E-94 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 Gene3D G3DSA:3.20.20.70 2 358 5.7E-145 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 SUPERFAMILY SSF51569 4 356 8.06E-129 T 11-10-2018 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.7E-177 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_06925 7dbba3ce9f11f6908feeadc6aaecb075 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.5E-109 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AL538_14530 a6ba2cc42246ae268379e37e7afaad71 465 SUPERFAMILY SSF48452 68 259 1.17E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_10975 e4cf4851d6baafb2244997bdb509c3bb 286 SUPERFAMILY SSF103481 43 141 1.7E-13 T 11-10-2018 AL538_10975 e4cf4851d6baafb2244997bdb509c3bb 286 Pfam PF00892 EamA-like transporter family 6 137 4.2E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_10975 e4cf4851d6baafb2244997bdb509c3bb 286 Pfam PF00892 EamA-like transporter family 143 268 4.6E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_10975 e4cf4851d6baafb2244997bdb509c3bb 286 SUPERFAMILY SSF103481 178 269 6.8E-15 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.856 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 Pfam PF01202 Shikimate kinase 13 169 1.7E-57 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 Gene3D G3DSA:3.40.50.300 1 172 1.0E-57 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 11-10-2018 AL538_07760 e7a6d7e31ca7d6e7f04bf093aadbf488 172 SUPERFAMILY SSF52540 4 169 2.36E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 Gene3D G3DSA:3.30.300.30 141 244 1.0E-12 T 11-10-2018 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 Pfam PF01514 Secretory protein of YscJ/FliF family 52 243 9.0E-64 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 34 572 9.6E-71 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 Pfam PF08345 Flagellar M-ring protein C-terminal 277 431 9.0E-38 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PRINTS PR01009 Flagellar M-ring protein signature 290 308 3.0E-26 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PRINTS PR01009 Flagellar M-ring protein signature 219 237 3.0E-26 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PRINTS PR01009 Flagellar M-ring protein signature 361 385 3.0E-26 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PRINTS PR01009 Flagellar M-ring protein signature 143 161 3.0E-26 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PRINTS PR01009 Flagellar M-ring protein signature 175 189 3.0E-26 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_21385 7c6126674830f7a463f2b55e8e8c93ef 583 PIRSF PIRSF004862 24 574 1.1E-126 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AL538_11100 d0cc4ee5eb7ac64ace40668cc8ec0bec 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 9 206 34.961 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AL538_11100 d0cc4ee5eb7ac64ace40668cc8ec0bec 209 SUPERFAMILY SSF52507 9 205 2.62E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL538_11100 d0cc4ee5eb7ac64ace40668cc8ec0bec 209 Pfam PF02441 Flavoprotein 10 185 1.0E-25 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AL538_11100 d0cc4ee5eb7ac64ace40668cc8ec0bec 209 Gene3D G3DSA:3.40.50.1950 2 207 9.4E-78 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AL538_11100 d0cc4ee5eb7ac64ace40668cc8ec0bec 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 204 7.6E-58 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AL538_04870 1c955dec8e6b92e6452c6891f501f235 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 1.0E-73 T 11-10-2018 IPR007411 Elongation factor P hydroxylase AL538_09445 ffaa6e670b5c9d56ca8e1cebc3df4003 369 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 288 1.5E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL538_09445 ffaa6e670b5c9d56ca8e1cebc3df4003 369 Gene3D G3DSA:1.10.10.10 305 364 9.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09445 ffaa6e670b5c9d56ca8e1cebc3df4003 369 Pfam PF02481 DNA recombination-mediator protein A 77 280 1.3E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AL538_09445 ffaa6e670b5c9d56ca8e1cebc3df4003 369 SUPERFAMILY SSF102405 83 290 4.58E-42 T 11-10-2018 AL538_09445 ffaa6e670b5c9d56ca8e1cebc3df4003 369 Gene3D G3DSA:3.40.50.450 1 293 7.9E-95 T 11-10-2018 AL538_01000 a5e7166fd2df3e639d5d80cc169c3a83 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 36 443 1.0E-117 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AL538_01000 a5e7166fd2df3e639d5d80cc169c3a83 451 Pfam PF02321 Outer membrane efflux protein 38 225 3.8E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_01000 a5e7166fd2df3e639d5d80cc169c3a83 451 Pfam PF02321 Outer membrane efflux protein 248 431 3.3E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_01000 a5e7166fd2df3e639d5d80cc169c3a83 451 Gene3D G3DSA:1.20.1600.10 36 442 1.5E-77 T 11-10-2018 AL538_01000 a5e7166fd2df3e639d5d80cc169c3a83 451 SUPERFAMILY SSF56954 11 434 1.7E-87 T 11-10-2018 AL538_00430 83cd87510a01e84e776846e76904a3fd 71 Gene3D G3DSA:2.30.330.10 1 68 1.7E-14 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_00430 83cd87510a01e84e776846e76904a3fd 71 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 2 66 8.1E-12 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_00430 83cd87510a01e84e776846e76904a3fd 71 SUPERFAMILY SSF101801 2 69 4.32E-12 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 Gene3D G3DSA:2.160.20.80 2 216 1.2E-60 T 11-10-2018 AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 SUPERFAMILY SSF141571 53 215 8.54E-37 T 11-10-2018 AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 SUPERFAMILY SSF141571 5 48 1.92E-9 T 11-10-2018 AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 Pfam PF13599 Pentapeptide repeats (9 copies) 52 104 5.3E-9 T 11-10-2018 IPR001646 Pentapeptide repeat AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 Pfam PF13599 Pentapeptide repeats (9 copies) 7 48 5.0E-7 T 11-10-2018 IPR001646 Pentapeptide repeat AL538_18680 de5d7115388a0d3257dfbaaa1ff50322 216 Pfam PF13599 Pentapeptide repeats (9 copies) 112 169 4.0E-7 T 11-10-2018 IPR001646 Pentapeptide repeat AL538_12965 52ea52dfd550f8091a789f511f6e8453 181 Gene3D G3DSA:3.40.1580.20 1 181 1.1E-69 T 11-10-2018 IPR038228 Syd superfamily AL538_12965 52ea52dfd550f8091a789f511f6e8453 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 5.6E-71 T 11-10-2018 IPR009948 Syd GO:0009898 AL538_12965 52ea52dfd550f8091a789f511f6e8453 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.2 T 11-10-2018 IPR009948 Syd GO:0009898 AL538_28575 1a5384ffe12a2354b4cbf8194c1cb5a8 48 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 42 2.2E-22 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL538_28575 1a5384ffe12a2354b4cbf8194c1cb5a8 48 PIRSF PIRSF037205 1 48 9.5E-25 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 187 6.6E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 SUPERFAMILY SSF47616 85 197 1.2E-18 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 Gene3D G3DSA:1.20.1050.10 87 207 4.1E-16 T 11-10-2018 AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 SUPERFAMILY SSF52833 1 99 2.13E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 Gene3D G3DSA:3.40.30.10 1 86 2.1E-29 T 11-10-2018 AL538_10005 156b4671a3a7e1af6cb6a7cc7c71511f 232 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 76 3.0E-21 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_11485 89b2c2335d3fc7f9a9e162551c31003a 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 1.4E-38 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 AL538_20600 42c7e8ce603007fa93a44227d07a848d 337 SUPERFAMILY SSF56281 77 304 6.03E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_20600 42c7e8ce603007fa93a44227d07a848d 337 Gene3D G3DSA:3.60.15.10 53 332 4.4E-83 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_20600 42c7e8ce603007fa93a44227d07a848d 337 PIRSF PIRSF038896 14 336 6.7E-95 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AL538_20600 42c7e8ce603007fa93a44227d07a848d 337 Pfam PF12706 Beta-lactamase superfamily domain 93 286 2.0E-43 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_14100 c912e6891326c3bc7354efc79e60453c 90 Gene3D G3DSA:1.10.1200.10 3 89 9.9E-21 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14100 c912e6891326c3bc7354efc79e60453c 90 SUPERFAMILY SSF47336 5 87 7.98E-14 T 11-10-2018 IPR036736 ACP-like superfamily AL538_14100 c912e6891326c3bc7354efc79e60453c 90 Pfam PF00550 Phosphopantetheine attachment site 7 80 2.3E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AL538_24320 f86196ec5ac8ca6c60fd9e48bdd88860 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 2.3E-91 T 11-10-2018 IPR021290 Protein of unknown function DUF2861 AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 SUPERFAMILY SSF53067 5 164 4.73E-7 T 11-10-2018 AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 Gene3D G3DSA:3.30.420.40 8 325 6.0E-44 T 11-10-2018 AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 Gene3D G3DSA:3.30.420.40 180 292 6.0E-44 T 11-10-2018 AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 PIRSF PIRSF019169 1 328 1.2E-88 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 1.2E-50 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 Gene3D G3DSA:3.30.1490.300 82 141 6.0E-44 T 11-10-2018 AL538_07785 8c1d51bfbbe20e16cea39734bec76f5d 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 2.1E-74 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM AL538_22090 0a4b05d57acd434da9ac143a20c90bc7 416 Pfam PF04932 O-Antigen ligase 179 336 8.0E-12 T 11-10-2018 IPR007016 O-antigen ligase-related AL538_16370 6f2535f02645efd2baf4525e95822151 315 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 10 310 6.5E-153 T 11-10-2018 IPR011781 D-serine deaminase transcriptional activator AL538_16370 6f2535f02645efd2baf4525e95822151 315 SUPERFAMILY SSF46785 16 124 1.1E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_16370 6f2535f02645efd2baf4525e95822151 315 SUPERFAMILY SSF53850 102 310 4.96E-28 T 11-10-2018 AL538_16370 6f2535f02645efd2baf4525e95822151 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 7.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16370 6f2535f02645efd2baf4525e95822151 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 7.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16370 6f2535f02645efd2baf4525e95822151 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 7.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_16370 6f2535f02645efd2baf4525e95822151 315 Gene3D G3DSA:3.40.190.10 174 280 1.6E-47 T 11-10-2018 AL538_16370 6f2535f02645efd2baf4525e95822151 315 Pfam PF03466 LysR substrate binding domain 101 309 1.9E-26 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_16370 6f2535f02645efd2baf4525e95822151 315 Gene3D G3DSA:3.40.190.10 114 306 1.6E-47 T 11-10-2018 AL538_16370 6f2535f02645efd2baf4525e95822151 315 Gene3D G3DSA:1.10.10.10 17 104 4.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16370 6f2535f02645efd2baf4525e95822151 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 3.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_05865 3423e2b568ad6af4a7db038d6da018db 204 Gene3D G3DSA:2.40.160.20 20 204 4.5E-14 T 11-10-2018 AL538_05865 3423e2b568ad6af4a7db038d6da018db 204 Pfam PF13505 Outer membrane protein beta-barrel domain 7 204 5.2E-18 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_05865 3423e2b568ad6af4a7db038d6da018db 204 SUPERFAMILY SSF56925 21 204 9.16E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 SMART SM00257 48 92 5.1E-11 T 11-10-2018 IPR018392 LysM domain AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 Pfam PF01476 LysM domain 49 91 1.1E-11 T 11-10-2018 IPR018392 LysM domain AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 SUPERFAMILY SSF51261 48 306 1.99E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 Gene3D G3DSA:3.10.350.10 35 100 1.3E-11 T 11-10-2018 IPR036779 LysM domain superfamily AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 Gene3D G3DSA:2.70.70.10 174 306 2.3E-37 T 11-10-2018 IPR011055 Duplicated hybrid motif AL538_06710 ba0d176a00456fe684cf1e97cceaa0da 307 Pfam PF01551 Peptidase family M23 208 302 1.4E-31 T 11-10-2018 IPR016047 Peptidase M23 AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 1.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 Gene3D G3DSA:1.25.40.10 354 516 4.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 Gene3D G3DSA:1.10.10.10 5 105 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 SMART SM00862 24 100 7.5E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 SUPERFAMILY SSF48452 339 486 9.86E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_08570 cc4ec81539c0bf5f1daa3c6a54daa337 523 SUPERFAMILY SSF46894 6 103 2.49E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_05695 32cfab961816186835d281f597b18423 450 Gene3D G3DSA:1.20.1250.20 248 442 4.6E-8 T 11-10-2018 AL538_05695 32cfab961816186835d281f597b18423 450 Pfam PF07690 Major Facilitator Superfamily 24 397 1.2E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_05695 32cfab961816186835d281f597b18423 450 Gene3D G3DSA:1.20.1250.20 11 222 6.2E-12 T 11-10-2018 AL538_05695 32cfab961816186835d281f597b18423 450 SUPERFAMILY SSF103473 10 436 7.59E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_08365 4fc21d7069468f42a119bbae62267e87 169 Pfam PF07813 LTXXQ motif family protein 38 148 6.9E-24 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL538_08365 4fc21d7069468f42a119bbae62267e87 169 PIRSF PIRSF034445 1 167 1.5E-20 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 AL538_08365 4fc21d7069468f42a119bbae62267e87 169 Gene3D G3DSA:1.20.120.1490 37 168 2.8E-26 T 11-10-2018 AL538_01145 06b48597a420baf4e5e77af0038e1814 68 Pfam PF04964 Flp/Fap pilin component 16 63 1.2E-14 T 11-10-2018 IPR007047 Flp/Fap pilin component AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 503 803 3.1E-75 T 11-10-2018 IPR009612 ImcF-related AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 SUPERFAMILY SSF52540 123 292 1.61E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1170 0.0 T 11-10-2018 IPR017731 Type VI secretion system, IcmF AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 6.7E-58 T 11-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 3.0E-87 T 11-10-2018 IPR025743 ImcF-related, N-terminal domain AL538_24920 db01652cc41405a74ad95e6b42f1f680 1172 Gene3D G3DSA:3.40.50.300 125 317 1.1E-5 T 11-10-2018 AL538_21625 480295b5859fde4a5709c22187c609aa 505 Gene3D G3DSA:3.30.870.10 58 253 1.9E-35 T 11-10-2018 AL538_21625 480295b5859fde4a5709c22187c609aa 505 SUPERFAMILY SSF56024 280 451 4.32E-34 T 11-10-2018 AL538_21625 480295b5859fde4a5709c22187c609aa 505 SUPERFAMILY SSF56024 43 236 1.94E-38 T 11-10-2018 AL538_21625 480295b5859fde4a5709c22187c609aa 505 Gene3D G3DSA:3.30.870.10 286 471 1.3E-41 T 11-10-2018 AL538_21625 480295b5859fde4a5709c22187c609aa 505 Pfam PF13091 PLD-like domain 310 445 1.6E-23 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_21625 480295b5859fde4a5709c22187c609aa 505 Pfam PF13091 PLD-like domain 76 224 2.7E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AL538_21625 480295b5859fde4a5709c22187c609aa 505 SMART SM00155 399 426 3.6E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_21625 480295b5859fde4a5709c22187c609aa 505 SMART SM00155 165 192 0.0098 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_10955 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AL538_16375 fd716f79b5d7005106445b4243103f4c 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 6 445 7.8E-159 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_16375 fd716f79b5d7005106445b4243103f4c 445 Pfam PF02447 GntP family permease 7 442 4.8E-153 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_16375 fd716f79b5d7005106445b4243103f4c 445 PIRSF PIRSF002746 2 445 1.0E-139 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AL538_08255 92d642db3c80fc1ad247fb8d1557919e 124 Pfam PF04892 VanZ like family 33 109 2.0E-10 T 11-10-2018 IPR006976 VanZ-like AL538_08255 92d642db3c80fc1ad247fb8d1557919e 124 SUPERFAMILY SSF144091 48 114 7.19E-5 T 11-10-2018 AL538_03245 a4b06e3ececa0bfb9ef86340b218718e 377 Gene3D G3DSA:1.10.620.20 2 341 4.1E-144 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AL538_03245 a4b06e3ececa0bfb9ef86340b218718e 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.5E-49 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03245 a4b06e3ececa0bfb9ef86340b218718e 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_03245 a4b06e3ececa0bfb9ef86340b218718e 377 SUPERFAMILY SSF47240 3 341 4.07E-112 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_23375 49f28599aaec0b62c1416b032b17bf70 582 Pfam PF05947 Type VI secretion system, TssF 5 580 2.0E-186 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_23375 49f28599aaec0b62c1416b032b17bf70 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 1.8E-201 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_23375 49f28599aaec0b62c1416b032b17bf70 582 PIRSF PIRSF028304 2 582 4.2E-206 T 11-10-2018 IPR010272 Type VI secretion system, TssF-like AL538_05790 095e233e61bf2f6fc41d83c687ab7875 324 Gene3D G3DSA:1.50.10.150 5 318 1.1E-43 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily AL538_05790 095e233e61bf2f6fc41d83c687ab7875 324 Pfam PF03595 Voltage-dependent anion channel 19 306 5.8E-31 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 Gene3D G3DSA:1.20.1440.100 17 90 6.9E-57 T 11-10-2018 AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 SUPERFAMILY SSF56784 1 205 4.54E-31 T 11-10-2018 IPR036412 HAD-like superfamily AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 8.8E-27 T 11-10-2018 AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 2.3E-28 T 11-10-2018 AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 1.3E-52 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AL538_21685 2082a291b3b19784f6d982bbd7e1b309 219 Gene3D G3DSA:3.40.50.1000 6 215 6.9E-57 T 11-10-2018 IPR023214 HAD superfamily AL538_27740 a0a245dd48886f629c23350f141c0aa3 387 Gene3D G3DSA:2.60.200.60 1 53 1.6E-10 T 11-10-2018 AL538_27740 a0a245dd48886f629c23350f141c0aa3 387 Gene3D G3DSA:2.60.200.60 54 95 5.3E-12 T 11-10-2018 AL538_27740 a0a245dd48886f629c23350f141c0aa3 387 Pfam PF05488 PAAR motif 21 86 3.9E-23 T 11-10-2018 IPR008727 PAAR motif AL538_22510 71feb2b58159dbf2afdc3041ecf22fa4 125 SUPERFAMILY SSF54427 1 123 2.77E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_22510 71feb2b58159dbf2afdc3041ecf22fa4 125 Gene3D G3DSA:3.10.450.50 1 125 1.5E-36 T 11-10-2018 AL538_22510 71feb2b58159dbf2afdc3041ecf22fa4 125 Pfam PF12680 SnoaL-like domain 8 102 1.1E-12 T 11-10-2018 IPR037401 SnoaL-like domain AL538_04195 30049ab140fd229be65533b2529b09fa 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.9E-99 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL538_04195 30049ab140fd229be65533b2529b09fa 214 Gene3D G3DSA:3.30.420.10 9 214 8.3E-55 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_04195 30049ab140fd229be65533b2529b09fa 214 SUPERFAMILY SSF53098 10 208 5.78E-57 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_04195 30049ab140fd229be65533b2529b09fa 214 Pfam PF00929 Exonuclease 20 195 4.0E-46 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_04195 30049ab140fd229be65533b2529b09fa 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.573 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AL538_04195 30049ab140fd229be65533b2529b09fa 214 SMART SM00479 18 204 5.4E-30 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_07270 02590e5c316721cf0371ea1e76347768 266 SUPERFAMILY SSF49785 2 156 3.91E-17 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_07270 02590e5c316721cf0371ea1e76347768 266 Gene3D G3DSA:2.60.120.260 26 157 4.5E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily AL538_10600 46136aac2ec73eb120b48fe44251383e 311 Gene3D G3DSA:3.40.630.30 143 302 6.0E-10 T 11-10-2018 AL538_10600 46136aac2ec73eb120b48fe44251383e 311 Pfam PF13480 Acetyltransferase (GNAT) domain 169 279 6.1E-8 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AL538_10600 46136aac2ec73eb120b48fe44251383e 311 SUPERFAMILY SSF55729 151 301 6.0E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 SUPERFAMILY SSF53720 13 497 5.76E-164 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.1E-167 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 Gene3D G3DSA:3.40.605.10 10 269 8.4E-90 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_01470 87931446f4776fd9d74636e5b3c867ad 506 Gene3D G3DSA:3.40.309.10 270 501 3.7E-75 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_15560 e8bbe11c67daa838b05a0de2f3fb2147 585 Pfam PF00474 Sodium:solute symporter family 32 417 4.3E-41 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_15560 e8bbe11c67daa838b05a0de2f3fb2147 585 Gene3D G3DSA:1.20.1730.10 20 488 6.8E-84 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_19805 f7348fe32372a850f3caa04e139cc3dc 71 SUPERFAMILY SSF47413 1 68 3.1E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_19805 f7348fe32372a850f3caa04e139cc3dc 71 Gene3D G3DSA:1.10.260.40 1 70 1.7E-10 T 11-10-2018 AL538_19805 f7348fe32372a850f3caa04e139cc3dc 71 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 8.4E-24 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_19805 f7348fe32372a850f3caa04e139cc3dc 71 SMART SM00530 6 62 1.6E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AL538_23180 4ab2e9caa7634e61f12d105d3bc8eb4a 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AL538_23180 4ab2e9caa7634e61f12d105d3bc8eb4a 141 SUPERFAMILY SSF53927 1 137 1.28E-42 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_23180 4ab2e9caa7634e61f12d105d3bc8eb4a 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 1.6E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AL538_23180 4ab2e9caa7634e61f12d105d3bc8eb4a 141 Gene3D G3DSA:3.40.140.10 1 140 9.5E-42 T 11-10-2018 AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 8.9E-59 T 11-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 7.2E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Gene3D G3DSA:1.20.58.370 16 105 1.7E-32 T 11-10-2018 IPR035277 MalF, N-terminal AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Gene3D G3DSA:1.10.3720.10 280 522 1.7E-69 T 11-10-2018 IPR035906 MetI-like superfamily AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 SUPERFAMILY SSF161098 272 513 1.15E-58 T 11-10-2018 IPR035906 MetI-like superfamily AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Gene3D G3DSA:3.10.650.10 108 278 1.8E-51 T 11-10-2018 AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 Gene3D G3DSA:2.40.430.10 128 214 1.8E-51 T 11-10-2018 AL538_22135 7f8673351ed39ade89dde572b9f1c995 524 SUPERFAMILY SSF160964 24 270 2.09E-81 T 11-10-2018 AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 1.1E-95 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 SMART SM00479 11 189 8.8E-52 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 SUPERFAMILY SSF53098 9 190 5.06E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 Pfam PF00929 Exonuclease 13 180 1.0E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 2.1E-81 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_05345 d7b19a9eadb527c7eddbc67dfa9609ef 239 Gene3D G3DSA:3.30.420.10 4 194 1.1E-57 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_16805 97e59261efc24b8a0356d5e37a9e15fa 100 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 5 92 1.7E-29 T 11-10-2018 IPR024476 Protein of unknown function DUF3861 AL538_16805 97e59261efc24b8a0356d5e37a9e15fa 100 Gene3D G3DSA:1.10.225.20 2 93 1.5E-28 T 11-10-2018 AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 SMART SM00671 72 107 0.0061 T 11-10-2018 IPR006597 Sel1-like repeat AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 SMART SM00671 144 179 22.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 SMART SM00671 108 143 2.9E-6 T 11-10-2018 IPR006597 Sel1-like repeat AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 Pfam PF08238 Sel1 repeat 108 143 1.7E-5 T 11-10-2018 IPR006597 Sel1-like repeat AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 Pfam PF08238 Sel1 repeat 76 106 0.027 T 11-10-2018 IPR006597 Sel1-like repeat AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 Gene3D G3DSA:1.25.40.10 33 211 1.2E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_08065 175cb1e7fde11cde16108851a10bee0b 211 SUPERFAMILY SSF81901 64 178 1.96E-22 T 11-10-2018 AL538_14945 3257f88839eebf5f89dfe86f9e77ad36 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 4.7E-92 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AL538_14945 3257f88839eebf5f89dfe86f9e77ad36 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 1.5E-42 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_14945 3257f88839eebf5f89dfe86f9e77ad36 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.745 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AL538_27800 81ec5f1e18e54933621b19c594d9757d 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.8E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_04865 c157cf693177d7a0069791f6c256fa0f 87 Pfam PF08891 YfcL protein 4 84 2.2E-33 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL AL538_06225 dff0222d103a59b4757d7f3963550aad 98 SMART SM01103 3 86 2.0E-41 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL538_06225 dff0222d103a59b4757d7f3963550aad 98 Gene3D G3DSA:3.30.110.60 1 98 8.1E-37 T 11-10-2018 IPR035920 YhbY-like superfamily AL538_06225 dff0222d103a59b4757d7f3963550aad 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.4E-21 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL538_06225 dff0222d103a59b4757d7f3963550aad 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 9.0E-44 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AL538_06225 dff0222d103a59b4757d7f3963550aad 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 1.5E-36 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AL538_06225 dff0222d103a59b4757d7f3963550aad 98 SUPERFAMILY SSF75471 1 94 6.41E-30 T 11-10-2018 IPR035920 YhbY-like superfamily AL538_16020 6c941bffa398c7e8c345661b23fe58ae 286 Pfam PF03280 Proteobacterial lipase chaperone protein 86 270 3.2E-39 T 11-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AL538_16020 6c941bffa398c7e8c345661b23fe58ae 286 SUPERFAMILY SSF158855 31 281 4.32E-63 T 11-10-2018 AL538_02395 ab818fc071107b63a6766202e10e7657 98 ProDom PD082093 YAFO SIMILAR YAFO-LIKE UNCHARACTERIZED PROTEIN ESCHERICHIA ECS0260 COLI 3 96 2.0E-8 T 11-10-2018 IPR020353 mRNA interferase toxin YafO AL538_02395 ab818fc071107b63a6766202e10e7657 98 Pfam PF13957 Toxin YafO, type II toxin-antitoxin system 2 94 1.5E-20 T 11-10-2018 IPR020353 mRNA interferase toxin YafO AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 PIRSF PIRSF006755 1 225 7.2E-79 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 Pfam PF13500 AAA domain 4 211 2.1E-38 T 11-10-2018 AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 Gene3D G3DSA:3.40.50.300 3 224 2.6E-69 T 11-10-2018 AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 SUPERFAMILY SSF52540 1 215 3.11E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 5.0E-54 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL538_15710 d62319ff716909fa82ea3a1524fb5e68 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.917 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AL538_09710 28bb56f20a7497e3d0f0fc35f87dc8e0 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.4E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AL538_09710 28bb56f20a7497e3d0f0fc35f87dc8e0 145 Gene3D G3DSA:2.60.40.790 34 137 2.4E-22 T 11-10-2018 IPR008978 HSP20-like chaperone AL538_09710 28bb56f20a7497e3d0f0fc35f87dc8e0 145 SUPERFAMILY SSF49764 6 137 1.53E-23 T 11-10-2018 IPR008978 HSP20-like chaperone AL538_23910 8c33443cc8d276c401c15271a98b9501 187 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 3.4E-26 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_23910 8c33443cc8d276c401c15271a98b9501 187 SUPERFAMILY SSF56925 23 187 3.4E-30 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_23910 8c33443cc8d276c401c15271a98b9501 187 Gene3D G3DSA:2.40.160.20 22 187 2.3E-27 T 11-10-2018 AL538_24995 d6a066c61ba6644b11d8a020fcc859c8 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 9.7E-15 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 AL538_24995 d6a066c61ba6644b11d8a020fcc859c8 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 1.1E-31 T 11-10-2018 IPR011979 Conserved hypothetical protein CHP02293 AL538_11565 dd0b83423c70c2abed1b5e7857b73fc7 159 SUPERFAMILY SSF101738 4 118 1.7E-49 T 11-10-2018 IPR036760 SspB-like superfamily AL538_11565 dd0b83423c70c2abed1b5e7857b73fc7 159 Pfam PF04386 Stringent starvation protein B 9 159 2.6E-42 T 11-10-2018 IPR007481 Stringent starvation protein B AL538_11565 dd0b83423c70c2abed1b5e7857b73fc7 159 Gene3D G3DSA:2.30.30.220 3 146 9.9E-53 T 11-10-2018 IPR036760 SspB-like superfamily AL538_11565 dd0b83423c70c2abed1b5e7857b73fc7 159 PIRSF PIRSF005276 3 159 3.6E-63 T 11-10-2018 IPR007481 Stringent starvation protein B AL538_21315 1a13a18e3ec2cae4d005b1ad30b484d9 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 5.7E-49 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AL538_21315 1a13a18e3ec2cae4d005b1ad30b484d9 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 6.9E-16 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL538_27970 0658f3e97b0a6be590c2cda3c3b53a54 119 Gene3D G3DSA:3.40.190.10 8 95 1.2E-17 T 11-10-2018 AL538_27970 0658f3e97b0a6be590c2cda3c3b53a54 119 Gene3D G3DSA:3.40.190.10 96 112 1.2E-17 T 11-10-2018 AL538_27970 0658f3e97b0a6be590c2cda3c3b53a54 119 Pfam PF03466 LysR substrate binding domain 8 117 6.7E-12 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_27970 0658f3e97b0a6be590c2cda3c3b53a54 119 SUPERFAMILY SSF53850 8 118 5.61E-12 T 11-10-2018 AL538_24580 03df0a69e8690bcf0f30c58fd772c10f 132 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 8.0E-47 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AL538_24580 03df0a69e8690bcf0f30c58fd772c10f 132 Pfam PF11756 Nitrous oxide-stimulated promoter 8 111 1.8E-47 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA AL538_17040 63132abaa4be4267caeb0f545ba02227 635 Gene3D G3DSA:3.30.300.30 506 634 1.3E-23 T 11-10-2018 AL538_17040 63132abaa4be4267caeb0f545ba02227 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 246 257 - T 11-10-2018 IPR020845 AMP-binding, conserved site AL538_17040 63132abaa4be4267caeb0f545ba02227 635 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 65 1.4E-11 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AL538_17040 63132abaa4be4267caeb0f545ba02227 635 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 2.5E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AL538_17040 63132abaa4be4267caeb0f545ba02227 635 Pfam PF00501 AMP-binding enzyme 74 510 1.4E-81 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AL538_17040 63132abaa4be4267caeb0f545ba02227 635 SUPERFAMILY SSF56801 8 623 1.06E-152 T 11-10-2018 AL538_17040 63132abaa4be4267caeb0f545ba02227 635 Gene3D G3DSA:3.40.50.12780 45 503 9.6E-101 T 11-10-2018 AL538_15075 d4bcb73df0c77064b622de3a4c79e5fb 189 SUPERFAMILY SSF101327 2 175 6.54E-31 T 11-10-2018 IPR036255 YgfB-like superfamily AL538_15075 d4bcb73df0c77064b622de3a4c79e5fb 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 3.0E-36 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL538_15075 d4bcb73df0c77064b622de3a4c79e5fb 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 174 2.4E-51 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 AL538_07570 05a23c6d1502f159ef24189d5f8546a8 290 Pfam PF00483 Nucleotidyl transferase 9 265 6.8E-33 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AL538_07570 05a23c6d1502f159ef24189d5f8546a8 290 SUPERFAMILY SSF53448 2 271 4.17E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_07570 05a23c6d1502f159ef24189d5f8546a8 290 Gene3D G3DSA:3.90.550.10 1 278 7.1E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_07570 05a23c6d1502f159ef24189d5f8546a8 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.9E-125 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 4.6E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 Gene3D G3DSA:1.10.1660.10 1 130 1.1E-36 T 11-10-2018 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.5E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.5E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.5E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 SMART SM00422 2 71 2.7E-30 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 4.4E-68 T 11-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 AL538_08575 a6f02eb749c96fec3ef074c0f182d6eb 132 SUPERFAMILY SSF46955 2 121 3.0E-34 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 SUPERFAMILY SSF53850 92 306 3.49E-48 T 11-10-2018 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 Gene3D G3DSA:3.40.190.10 92 305 2.2E-59 T 11-10-2018 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 Gene3D G3DSA:3.40.190.10 182 280 2.2E-59 T 11-10-2018 AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 Pfam PF03466 LysR substrate binding domain 97 308 3.3E-30 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 SUPERFAMILY SSF46785 7 86 3.03E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 Gene3D G3DSA:1.10.10.10 2 89 6.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_09310 ab2224967b85231e4ebf6f9a52711b86 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.4E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_20420 9fb5149c7b9c4e0a243f4081ad3dd3c5 304 Pfam PF08878 Domain of unknown function (DUF1837) 42 283 3.2E-56 T 11-10-2018 IPR014976 Protein of unknown function DUF1837 AL538_18615 058bf975fd173cbb25251bdc747a8575 198 Pfam PF01810 LysE type translocator 12 197 6.9E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_14515 a4c165e4aa67591656b04d695d6da99b 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 8.8E-164 T 11-10-2018 IPR015093 Protein of unknown function DUF1887 AL538_14515 a4c165e4aa67591656b04d695d6da99b 386 Gene3D G3DSA:3.40.1350.10 251 376 2.5E-77 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL538_14515 a4c165e4aa67591656b04d695d6da99b 386 Gene3D G3DSA:3.40.50.10770 1 140 3.9E-60 T 11-10-2018 AL538_14515 a4c165e4aa67591656b04d695d6da99b 386 Gene3D G3DSA:1.10.10.680 169 250 2.5E-77 T 11-10-2018 AL538_14515 a4c165e4aa67591656b04d695d6da99b 386 SUPERFAMILY SSF52980 1 382 5.01E-119 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_19715 a632e187633c68e3874f269426ccacca 105 Pfam PF02656 Domain of unknown function (DUF202) 13 61 1.1E-5 T 11-10-2018 IPR003807 Domain of unknown function DUF202 AL538_08960 3ae2814ebf2926ecebca205dba24bbac 183 Gene3D G3DSA:3.40.1410.10 13 178 4.8E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_08960 3ae2814ebf2926ecebca205dba24bbac 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.752 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AL538_08960 3ae2814ebf2926ecebca205dba24bbac 183 Pfam PF04345 Chorismate lyase 18 182 1.1E-56 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 AL538_08960 3ae2814ebf2926ecebca205dba24bbac 183 SUPERFAMILY SSF64288 12 178 1.41E-45 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AL538_26560 92158212056b829e34f3a3c4747d3ad3 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 134 1.7E-21 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_15940 2bd8a78d93a2ce889eba26e91de15de9 284 SUPERFAMILY SSF81345 3 262 3.4E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_15940 2bd8a78d93a2ce889eba26e91de15de9 284 Pfam PF00950 ABC 3 transport family 11 265 1.4E-81 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL538_15940 2bd8a78d93a2ce889eba26e91de15de9 284 Gene3D G3DSA:1.10.3470.10 36 273 1.2E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_14715 70c206f1c7478b170c70333cbe41ce77 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 4.9E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_07200 1b2979d45e703d3c269400b080f8fc42 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 9.0E-113 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AL538_07200 1b2979d45e703d3c269400b080f8fc42 447 PIRSF PIRSF006351 7 437 7.3E-146 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AL538_07200 1b2979d45e703d3c269400b080f8fc42 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 2.9E-64 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AL538_05335 fe53b21334b818bfe69b7b021f1255bc 168 Gene3D G3DSA:3.30.460.10 1 122 1.8E-9 T 11-10-2018 AL538_05335 fe53b21334b818bfe69b7b021f1255bc 168 SUPERFAMILY SSF81301 3 51 2.8E-5 T 11-10-2018 AL538_09780 75f8bc60846c8f08f15d62cacd567bd3 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 1.5E-116 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_09780 75f8bc60846c8f08f15d62cacd567bd3 485 Pfam PF02386 Cation transport protein 39 477 1.7E-89 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL538_09780 75f8bc60846c8f08f15d62cacd567bd3 485 PIRSF PIRSF006247 1 485 3.4E-177 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_12955 082def83696f0735f3436c1b850d2087 760 Gene3D G3DSA:1.25.40.10 245 543 1.0E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 254 287 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 416 449 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 88 121 26.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 174 207 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 294 327 0.016 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SMART SM00028 334 367 83.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SUPERFAMILY SSF48452 177 363 8.43E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 SUPERFAMILY SSF48452 336 445 6.07E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_12955 082def83696f0735f3436c1b850d2087 760 Gene3D G3DSA:1.25.40.10 70 244 2.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_26885 affddec2804c6e5c642f6b5cf5f9a1ad 282 SUPERFAMILY SSF161098 4 278 2.49E-56 T 11-10-2018 IPR035906 MetI-like superfamily AL538_26885 affddec2804c6e5c642f6b5cf5f9a1ad 282 Gene3D G3DSA:1.10.3720.10 1 275 2.3E-49 T 11-10-2018 IPR035906 MetI-like superfamily AL538_26885 affddec2804c6e5c642f6b5cf5f9a1ad 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 277 7.2E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_04240 cb1a2539fb3874ed8b7cb1d9305d20f8 220 Gene3D G3DSA:1.20.58.430 23 206 5.0E-11 T 11-10-2018 IPR023220 Type IV secretion system, VirB5-domain AL538_04240 cb1a2539fb3874ed8b7cb1d9305d20f8 220 SUPERFAMILY SSF101082 23 204 2.22E-19 T 11-10-2018 AL538_04240 cb1a2539fb3874ed8b7cb1d9305d20f8 220 Pfam PF07996 Type IV secretion system proteins 23 204 4.4E-21 T 11-10-2018 IPR014158 Type IV secretion system, VirB5 AL538_15600 a3c65955c3986039d344f68615182e2c 442 SUPERFAMILY SSF56219 175 440 7.72E-65 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_15600 a3c65955c3986039d344f68615182e2c 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 5.6E-10 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_15600 a3c65955c3986039d344f68615182e2c 442 Gene3D G3DSA:3.60.10.10 170 441 3.7E-64 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_12490 76df1fbed79e09607fa608fee6e4b1d5 380 Gene3D G3DSA:3.40.50.1820 8 271 1.6E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_12490 76df1fbed79e09607fa608fee6e4b1d5 380 SUPERFAMILY SSF53474 58 217 1.04E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_12490 76df1fbed79e09607fa608fee6e4b1d5 380 Pfam PF01764 Lipase (class 3) 75 205 1.3E-24 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AL538_04210 1f2b8b8b51ba867e2aae5da61ee0e846 60 Pfam PF05509 TraY domain 12 59 7.9E-22 T 11-10-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 Pfam PF04994 TfoX C-terminal domain 115 194 1.1E-30 T 11-10-2018 IPR007077 TfoX, C-terminal AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 Gene3D G3DSA:3.30.1460.30 1 105 2.9E-38 T 11-10-2018 AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 PIRSF PIRSF028788 1 196 1.2E-50 T 11-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 SUPERFAMILY SSF159894 5 104 1.94E-31 T 11-10-2018 AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 Pfam PF04993 TfoX N-terminal domain 12 103 1.4E-30 T 11-10-2018 IPR007076 TfoX, N-terminal AL538_14820 1284bc9a2fd49bddaa1c8e5208e05dcc 196 Gene3D G3DSA:1.10.150.20 114 196 1.1E-22 T 11-10-2018 AL538_23110 a906d37c7d8b09623ff02e2c82421f3f 320 Pfam PF01882 Protein of unknown function DUF58 58 143 8.2E-20 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AL538_00210 a906d37c7d8b09623ff02e2c82421f3f 320 Pfam PF01882 Protein of unknown function DUF58 58 143 8.2E-20 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AL538_15935 2ccd94285e19aa166e5c06c553a9fba7 302 Pfam PF00950 ABC 3 transport family 10 264 1.4E-80 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL538_15935 2ccd94285e19aa166e5c06c553a9fba7 302 Gene3D G3DSA:1.10.3470.10 35 268 1.0E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_15935 2ccd94285e19aa166e5c06c553a9fba7 302 SUPERFAMILY SSF81345 3 260 3.4E-38 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_08985 def7c9804ebea14325cd09433a79330b 322 PIRSF PIRSF003097 24 318 1.1E-61 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 AL538_20585 67869d512f9559fdecfc381211312e91 301 Gene3D G3DSA:3.30.1490.20 115 181 2.9E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AL538_20585 67869d512f9559fdecfc381211312e91 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 6.4E-85 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AL538_20585 67869d512f9559fdecfc381211312e91 301 Gene3D G3DSA:3.40.50.20 1 114 1.7E-40 T 11-10-2018 AL538_20585 67869d512f9559fdecfc381211312e91 301 SUPERFAMILY SSF56059 98 288 2.65E-50 T 11-10-2018 AL538_20585 67869d512f9559fdecfc381211312e91 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.4E-67 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AL538_20585 67869d512f9559fdecfc381211312e91 301 Gene3D G3DSA:3.30.470.80 182 299 8.2E-43 T 11-10-2018 AL538_20585 67869d512f9559fdecfc381211312e91 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.363 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AL538_10620 79b8e333774bfb567ab89867192a695e 421 SUPERFAMILY SSF53756 53 419 1.03E-14 T 11-10-2018 AL538_10620 79b8e333774bfb567ab89867192a695e 421 Pfam PF00534 Glycosyl transferases group 1 236 403 2.1E-6 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AL538_10620 79b8e333774bfb567ab89867192a695e 421 Gene3D G3DSA:3.40.50.2000 216 405 1.4E-63 T 11-10-2018 AL538_10620 79b8e333774bfb567ab89867192a695e 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 1.1E-62 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL538_10620 79b8e333774bfb567ab89867192a695e 421 Gene3D G3DSA:3.40.50.11720 33 210 2.9E-48 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AL538_12990 18f943ed8d726b9ba0be512c3aa7a243 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.7E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_12990 18f943ed8d726b9ba0be512c3aa7a243 225 Gene3D G3DSA:1.10.3720.10 12 225 5.6E-52 T 11-10-2018 IPR035906 MetI-like superfamily AL538_12990 18f943ed8d726b9ba0be512c3aa7a243 225 SUPERFAMILY SSF161098 15 210 9.68E-48 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09150 0177beaacc2a5138632ebe924eb41d4c 242 Gene3D G3DSA:3.40.50.10090 32 161 1.1E-67 T 11-10-2018 AL538_09150 0177beaacc2a5138632ebe924eb41d4c 242 SUPERFAMILY SSF69618 1 241 5.1E-49 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_09150 0177beaacc2a5138632ebe924eb41d4c 242 Gene3D G3DSA:3.40.50.10090 4 240 1.1E-67 T 11-10-2018 AL538_09150 0177beaacc2a5138632ebe924eb41d4c 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 8.6E-34 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AL538_21465 aa826c8793b28770924b8f5179b1498c 227 Pfam PF06468 Spondin_N 40 157 4.0E-9 T 11-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_21465 aa826c8793b28770924b8f5179b1498c 227 Gene3D G3DSA:2.60.40.2130 28 168 6.2E-12 T 11-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 SUPERFAMILY SSF53649 1 406 1.15E-69 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.3E-177 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 Gene3D G3DSA:3.40.720.10 3 406 4.7E-149 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 PIRSF PIRSF001491 1 406 2.3E-160 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 Gene3D G3DSA:3.30.70.1250 116 237 4.7E-149 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.96 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 AL538_06065 8607b3b9b227f34f334c2a6fffd44e57 406 Pfam PF01676 Metalloenzyme superfamily 2 397 1.9E-42 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AL538_18545 c7dd97ef2977b6a87407900fde7836c5 242 Gene3D G3DSA:3.40.50.150 8 215 1.8E-22 T 11-10-2018 AL538_18545 c7dd97ef2977b6a87407900fde7836c5 242 Pfam PF08242 Methyltransferase domain 46 144 8.6E-12 T 11-10-2018 IPR013217 Methyltransferase type 12 AL538_18545 c7dd97ef2977b6a87407900fde7836c5 242 SUPERFAMILY SSF53335 31 217 3.47E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_24400 6fd6f125e2c367eb12d1f1057065ae8f 123 SUPERFAMILY SSF101756 20 122 2.22E-22 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL538_24400 6fd6f125e2c367eb12d1f1057065ae8f 123 Gene3D G3DSA:2.40.50.200 18 123 1.7E-15 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL538_24400 6fd6f125e2c367eb12d1f1057065ae8f 123 Pfam PF04076 Bacterial OB fold (BOF) protein 50 120 1.8E-9 T 11-10-2018 IPR005220 Bacterial OB-fold AL538_04260 ed2b175e09afd498d7de6445f73d1d4a 255 Pfam PF03524 Conjugal transfer protein 31 226 4.1E-54 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AL538_04260 ed2b175e09afd498d7de6445f73d1d4a 255 Gene3D G3DSA:2.60.40.2500 130 254 1.1E-34 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily AL538_24175 64d08c3df3597928c9e769a03594425e 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 2.8E-51 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL538_24175 64d08c3df3597928c9e769a03594425e 198 PIRSF PIRSF020606 1 198 1.3E-82 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AL538_24160 97f6f10b7c5340c891adde636f80a5b3 568 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 3.3E-18 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_24160 97f6f10b7c5340c891adde636f80a5b3 568 Gene3D G3DSA:3.40.190.10 122 324 9.8E-38 T 11-10-2018 AL538_24160 97f6f10b7c5340c891adde636f80a5b3 568 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 6.7E-37 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL538_24160 97f6f10b7c5340c891adde636f80a5b3 568 SUPERFAMILY SSF53850 117 559 1.79E-58 T 11-10-2018 AL538_16205 b22245846e813358d093d7042dd9d27e 400 SUPERFAMILY SSF103473 8 398 1.23E-64 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_16205 b22245846e813358d093d7042dd9d27e 400 Gene3D G3DSA:1.20.1720.10 17 396 6.4E-100 T 11-10-2018 AL538_16205 b22245846e813358d093d7042dd9d27e 400 Pfam PF07690 Major Facilitator Superfamily 24 364 7.0E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_16205 b22245846e813358d093d7042dd9d27e 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 2.9E-118 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AL538_18485 2e64554113f858bbf17a89774fefee83 148 SUPERFAMILY SSF47413 8 52 3.66E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_26225 04e57c715571f3bf4c3c3a6f4a191e8a 210 PIRSF PIRSF006324 1 209 4.8E-57 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_26225 04e57c715571f3bf4c3c3a6f4a191e8a 210 Pfam PF01810 LysE type translocator 16 205 5.7E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 Pfam PF12945 Flagellar protein YcgR 15 105 1.2E-8 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 Gene3D G3DSA:2.40.10.220 113 219 5.3E-9 T 11-10-2018 AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 SUPERFAMILY SSF141371 116 218 7.65E-20 T 11-10-2018 AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 Pfam PF07238 PilZ domain 113 211 7.7E-13 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 Gene3D G3DSA:2.30.110.10 2 112 3.0E-11 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AL538_22580 eb730d894f6b06ee8196b4bd9a843638 220 SUPERFAMILY SSF141371 2 115 3.3E-28 T 11-10-2018 AL538_08415 2de029fcddc896c0ad7957278a2de957 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 7.5E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_08415 2de029fcddc896c0ad7957278a2de957 208 Pfam PF01914 MarC family integral membrane protein 3 204 1.9E-43 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AL538_10445 37c1539f05f576a1fddbd96aa477366c 608 Gene3D G3DSA:3.10.105.10 319 542 7.9E-40 T 11-10-2018 AL538_10445 37c1539f05f576a1fddbd96aa477366c 608 SUPERFAMILY SSF53850 41 561 1.84E-93 T 11-10-2018 AL538_10445 37c1539f05f576a1fddbd96aa477366c 608 PIRSF PIRSF002741 2 563 9.6E-67 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_10445 37c1539f05f576a1fddbd96aa477366c 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 2.0E-55 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_10445 37c1539f05f576a1fddbd96aa477366c 608 Gene3D G3DSA:3.40.190.10 19 318 2.5E-46 T 11-10-2018 AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 Gene3D G3DSA:2.170.130.10 32 164 8.9E-42 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 Gene3D G3DSA:2.40.170.20 170 676 2.4E-127 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 159 5.0E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 Pfam PF00593 TonB dependent receptor 303 673 3.2E-57 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 SUPERFAMILY SSF56935 33 676 2.98E-128 T 11-10-2018 AL538_20090 6bc2543f9c42809fce0a2c354ce63ac5 676 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 659 676 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AL538_02805 77132bc1b855935f9cdc8a49485b5022 521 Gene3D G3DSA:3.40.1350.10 1 118 8.0E-11 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AL538_02805 77132bc1b855935f9cdc8a49485b5022 521 Pfam PF01939 Endonuclease NucS 4 96 1.4E-7 T 11-10-2018 IPR002793 Endonuclease NucS GO:0004519 AL538_15365 e142bd40d30d9e2efaf16158c24233dc 107 SUPERFAMILY SSF51182 9 101 7.83E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_15365 e142bd40d30d9e2efaf16158c24233dc 107 Gene3D G3DSA:2.60.120.10 5 105 1.2E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_20000 55e93495f76466635e07fc5e70bf8382 365 Gene3D G3DSA:1.25.40.10 15 233 3.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20000 55e93495f76466635e07fc5e70bf8382 365 SUPERFAMILY SSF48452 82 160 2.61E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_20000 55e93495f76466635e07fc5e70bf8382 365 Pfam PF02698 DUF218 domain 194 311 2.7E-19 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 Gene3D G3DSA:2.60.200.40 123 283 3.8E-76 T 11-10-2018 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 Gene3D G3DSA:3.40.50.10330 23 284 3.8E-76 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 292 4.2E-69 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 125 5.8E-26 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 298 43.508 T 11-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 SMART SM00046 3 130 1.1E-9 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AL538_23190 358597cf07cfd36d4538c3e8c18c428d 300 SUPERFAMILY SSF111331 1 295 2.07E-70 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AL538_13400 77133f427a890e0ffe9e52e7d1d9af83 212 PIRSF PIRSF028688 1 212 4.6E-118 T 11-10-2018 IPR014549 Flagellar protein FlgO AL538_01115 14a4fa5cb888c151fa0adc841783de71 289 Pfam PF00482 Type II secretion system (T2SS), protein F 122 246 4.9E-18 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_01115 14a4fa5cb888c151fa0adc841783de71 289 Gene3D G3DSA:1.20.81.30 114 226 3.5E-5 T 11-10-2018 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.6E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF07196 Flagellin hook IN motif 195 249 1.7E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:3.30.70.2120 174 275 4.5E-76 T 11-10-2018 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:1.20.1330.10 44 327 4.5E-76 T 11-10-2018 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 11-10-2018 AL538_13495 1c6287b55b8c6ee8ddab3aef3b2a382c 377 SUPERFAMILY SSF64518 1 376 6.8E-97 T 11-10-2018 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.6E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 5.7E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Pfam PF07196 Flagellin hook IN motif 195 249 1.7E-11 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:3.30.70.2120 174 275 4.5E-76 T 11-10-2018 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:1.20.1330.10 44 327 4.5E-76 T 11-10-2018 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 Gene3D G3DSA:1.10.8.410 328 376 1.9E-20 T 11-10-2018 AL538_05165 1c6287b55b8c6ee8ddab3aef3b2a382c 377 SUPERFAMILY SSF64518 1 376 6.8E-97 T 11-10-2018 AL538_12920 280fee44021300dbde656bc91a8af865 207 Gene3D G3DSA:3.40.50.1820 13 196 4.3E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_12920 280fee44021300dbde656bc91a8af865 207 Pfam PF01738 Dienelactone hydrolase family 79 190 2.3E-6 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AL538_12920 280fee44021300dbde656bc91a8af865 207 SUPERFAMILY SSF53474 3 178 1.28E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_05105 c250f2ca3a541a3fc226e4e946de777a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 89 111 3.1E-5 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL538_05105 c250f2ca3a541a3fc226e4e946de777a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 3.1E-5 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL538_05105 c250f2ca3a541a3fc226e4e946de777a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 112 130 3.1E-5 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 AL538_05105 c250f2ca3a541a3fc226e4e946de777a 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 7.7E-36 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL538_13280 07dae602bcc39a8e5d7bbf0c4c6a7301 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 2.2E-40 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AL538_13280 07dae602bcc39a8e5d7bbf0c4c6a7301 127 PIRSF PIRSF005610 1 121 1.7E-19 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB AL538_27070 9c1ed2245f16cd58dc1bbcf1694c7dd6 494 Pfam PF08811 Protein of unknown function (DUF1800) 11 491 1.5E-63 T 11-10-2018 IPR014917 Protein of unknown function DUF1800 AL538_17560 18fc76e305bef06f978ec0c8ff49337e 169 Pfam PF04170 NlpE N-terminal domain 74 158 1.9E-29 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE AL538_17560 18fc76e305bef06f978ec0c8ff49337e 169 Gene3D G3DSA:2.40.128.640 61 168 5.5E-41 T 11-10-2018 AL538_24530 34ac3faea366b2fcc57df01297a95047 373 SUPERFAMILY SSF111369 62 130 2.09E-7 T 11-10-2018 AL538_24530 34ac3faea366b2fcc57df01297a95047 373 Gene3D G3DSA:1.10.287.470 96 190 1.4E-15 T 11-10-2018 AL538_24530 34ac3faea366b2fcc57df01297a95047 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 1.7E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AL538_24530 34ac3faea366b2fcc57df01297a95047 373 SUPERFAMILY SSF111369 161 298 2.09E-8 T 11-10-2018 AL538_24530 34ac3faea366b2fcc57df01297a95047 373 Gene3D G3DSA:2.40.50.100 63 95 1.4E-15 T 11-10-2018 AL538_24530 34ac3faea366b2fcc57df01297a95047 373 Gene3D G3DSA:2.40.30.170 233 352 1.8E-25 T 11-10-2018 AL538_00980 7d7218ad508a4c60538fbfb7b9b1a14a 90 SUPERFAMILY SSF54975 4 89 3.27E-26 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL538_00980 7d7218ad508a4c60538fbfb7b9b1a14a 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL538_00980 7d7218ad508a4c60538fbfb7b9b1a14a 90 Pfam PF00708 Acylphosphatase 7 89 2.1E-23 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL538_00980 7d7218ad508a4c60538fbfb7b9b1a14a 90 Gene3D G3DSA:3.30.70.100 1 90 6.8E-29 T 11-10-2018 AL538_00980 7d7218ad508a4c60538fbfb7b9b1a14a 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AL538_11965 6e97941730a7301f6e7213b09f200268 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 8.1E-19 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL538_11965 6e97941730a7301f6e7213b09f200268 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 9.3E-23 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 206 225 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 350 372 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 87 109 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 178 196 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 PRINTS PR00175 Sodium/alanine symporter signature 411 431 3.9E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.9E-162 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_11855 a479aca5694c4f7836c1141aa655a82e 478 Pfam PF01235 Sodium:alanine symporter family 48 453 5.9E-163 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AL538_05855 634339710ef65bd3608deb4e293e9dc7 394 Pfam PF05940 NnrS protein 16 388 1.5E-106 T 11-10-2018 IPR010266 NnrS AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 SUPERFAMILY SSF51971 10 407 1.65E-38 T 11-10-2018 AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 SUPERFAMILY SSF54373 273 360 6.41E-8 T 11-10-2018 AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 Gene3D G3DSA:3.50.50.60 7 77 4.0E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 Gene3D G3DSA:3.30.9.10 142 360 2.1E-33 T 11-10-2018 AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 Pfam PF01266 FAD dependent oxidoreductase 12 398 1.9E-52 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_01800 8d17c9fb31aa3a69b9b912b692fb5e12 418 Gene3D G3DSA:3.50.50.60 117 402 2.1E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_15285 efeb466fd9de653637394bda5c6c4532 615 SUPERFAMILY SSF103388 346 614 3.66E-80 T 11-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 AL538_15285 efeb466fd9de653637394bda5c6c4532 615 Pfam PF04792 V antigen (LcrV) protein 418 615 7.8E-28 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL538_15285 efeb466fd9de653637394bda5c6c4532 615 PRINTS PR01592 Low calcium response V antigen signature 425 445 4.3E-15 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL538_15285 efeb466fd9de653637394bda5c6c4532 615 PRINTS PR01592 Low calcium response V antigen signature 549 570 4.3E-15 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL538_15285 efeb466fd9de653637394bda5c6c4532 615 PRINTS PR01592 Low calcium response V antigen signature 571 590 4.3E-15 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL538_15285 efeb466fd9de653637394bda5c6c4532 615 PRINTS PR01592 Low calcium response V antigen signature 590 612 4.3E-15 T 11-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 246 313 1.4E-18 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 SUPERFAMILY SSF101801 164 219 3.4E-6 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 38 313 1.6E-61 T 11-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 SUPERFAMILY SSF101801 242 318 1.22E-17 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 Gene3D G3DSA:2.30.330.10 230 317 2.9E-25 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 184 194 3.0E-7 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 246 258 3.0E-7 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AL538_15225 c8bf1c24a2288bd9eb644bb7bdc980c7 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 290 307 3.0E-7 T 11-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AL538_19590 4b9869dca9e179b3fdc530a3b58a281d 189 SUPERFAMILY SSF55729 14 187 1.1E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_19590 4b9869dca9e179b3fdc530a3b58a281d 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 161 2.9E-22 T 11-10-2018 IPR000182 GNAT domain AL538_19590 4b9869dca9e179b3fdc530a3b58a281d 189 Gene3D G3DSA:3.40.630.30 6 188 3.2E-40 T 11-10-2018 AL538_26745 cf865a057a09f5d8175b535ae05f11f8 781 Gene3D G3DSA:2.170.130.10 25 178 2.0E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AL538_26745 cf865a057a09f5d8175b535ae05f11f8 781 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 174 1.8E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AL538_26745 cf865a057a09f5d8175b535ae05f11f8 781 SUPERFAMILY SSF56935 38 781 6.11E-52 T 11-10-2018 AL538_26745 cf865a057a09f5d8175b535ae05f11f8 781 Gene3D G3DSA:2.40.170.20 215 781 2.8E-29 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AL538_05665 f2e79796aba031a77f44794e22ab4d1a 413 Pfam PF03116 NQR2, RnfD, RnfE family 40 404 6.0E-107 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AL538_05665 f2e79796aba031a77f44794e22ab4d1a 413 PIRSF PIRSF016055 1 413 5.7E-199 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_05665 f2e79796aba031a77f44794e22ab4d1a 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 411 36.49 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_05665 f2e79796aba031a77f44794e22ab4d1a 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 2 407 3.0E-203 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_00750 5fedf7cbcf5f216ecdb089597278d524 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL538_00750 5fedf7cbcf5f216ecdb089597278d524 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 7.3E-18 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL538_08595 d11132d648a080b1c60fb7020149abd3 243 PIRSF PIRSF028160 6 243 3.8E-120 T 11-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 AL538_08595 d11132d648a080b1c60fb7020149abd3 243 Pfam PF07356 Protein of unknown function (DUF1481) 45 239 2.1E-56 T 11-10-2018 IPR010858 Protein of unknown function DUF1481 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PIRSF PIRSF000723 2 302 3.4E-112 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 1.8E-61 T 11-10-2018 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 Gene3D G3DSA:3.40.1160.10 1 301 2.2E-110 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 Pfam PF00696 Amino acid kinase family 5 283 1.3E-30 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 SUPERFAMILY SSF53633 5 300 4.06E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_19745 ebe83918c16d1cf9eb24136b62a50f88 302 TIGRFAM TIGR00746 arcC: carbamate kinase 6 301 7.8E-114 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 Gene3D G3DSA:1.10.150.240 16 84 1.1E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 SUPERFAMILY SSF56784 1 212 7.85E-51 T 11-10-2018 IPR036412 HAD-like superfamily AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 6.8E-34 T 11-10-2018 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 182 4.7E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_21950 fecded03e1c2ba1f773b847df6e58b1e 215 Gene3D G3DSA:3.40.50.1000 4 195 1.1E-51 T 11-10-2018 IPR023214 HAD superfamily AL538_23885 3c7d85147700aa703301d7f682f6d720 241 Gene3D G3DSA:1.10.357.10 1 152 3.7E-25 T 11-10-2018 AL538_23885 3c7d85147700aa703301d7f682f6d720 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 2.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_23885 3c7d85147700aa703301d7f682f6d720 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_23885 3c7d85147700aa703301d7f682f6d720 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_23885 3c7d85147700aa703301d7f682f6d720 241 SUPERFAMILY SSF46689 9 86 1.28E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03545 f993988457e65071adc2364e2fbc5647 339 PIRSF PIRSF029594 1 330 6.2E-92 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 AL538_03545 f993988457e65071adc2364e2fbc5647 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 2.1E-45 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AL538_03545 f993988457e65071adc2364e2fbc5647 339 Pfam PF13515 Fusaric acid resistance protein-like 186 313 1.3E-6 T 11-10-2018 AL538_27885 660d03f8d5a5ec9d1c784cfc013c06c9 68 Pfam PF11665 Protein of unknown function (DUF3265) 41 68 2.5E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_27870 660d03f8d5a5ec9d1c784cfc013c06c9 68 Pfam PF11665 Protein of unknown function (DUF3265) 41 68 2.5E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_18505 dc1e3d146f465f24417706855cdc29d6 378 Pfam PF05651 Putative sugar diacid recognition 4 137 3.1E-51 T 11-10-2018 IPR008599 Putative sugar diacid recognition AL538_18505 dc1e3d146f465f24417706855cdc29d6 378 Gene3D G3DSA:1.10.10.2840 249 378 1.9E-23 T 11-10-2018 AL538_18505 dc1e3d146f465f24417706855cdc29d6 378 Pfam PF13556 PucR C-terminal helix-turn-helix domain 316 372 4.8E-22 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain AL538_21620 81bad270d93384c12f1ddcef81ab8720 195 SUPERFAMILY SSF53335 5 177 2.35E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_21620 81bad270d93384c12f1ddcef81ab8720 195 Pfam PF13649 Methyltransferase domain 36 126 2.4E-8 T 11-10-2018 AL538_21620 81bad270d93384c12f1ddcef81ab8720 195 Gene3D G3DSA:3.40.50.150 4 195 5.6E-23 T 11-10-2018 AL538_04920 2d99709945b8546aa0332e4a776511ec 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 240 6.8E-85 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 AL538_17580 92ccb05cf4ac25d00160412a5caf4155 301 SUPERFAMILY SSF103481 42 142 3.92E-15 T 11-10-2018 AL538_17580 92ccb05cf4ac25d00160412a5caf4155 301 SUPERFAMILY SSF103481 182 281 3.14E-10 T 11-10-2018 AL538_17580 92ccb05cf4ac25d00160412a5caf4155 301 Pfam PF00892 EamA-like transporter family 9 138 1.9E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_20235 a96c63ca2de75b68c45d0dc57ccf927d 176 Gene3D G3DSA:3.40.630.30 1 162 6.3E-30 T 11-10-2018 AL538_20235 a96c63ca2de75b68c45d0dc57ccf927d 176 Pfam PF00583 Acetyltransferase (GNAT) family 49 139 2.9E-16 T 11-10-2018 IPR000182 GNAT domain AL538_20235 a96c63ca2de75b68c45d0dc57ccf927d 176 SUPERFAMILY SSF55729 1 167 3.21E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_12660 a6cc15e111c5102401b020ba77837da0 677 Pfam PF08665 PglZ domain 441 600 3.6E-7 T 11-10-2018 IPR013973 PglZ domain AL538_12660 a6cc15e111c5102401b020ba77837da0 677 ProSitePatterns PS00221 MIP family signature. 636 644 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 AL538_19290 bdd43659743181c3fa7e6d3349cdad97 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 4.8E-26 T 11-10-2018 IPR007263 Protein of unknown function DUF393 AL538_20470 fee6a7c5c1e5c9704a59dbad2d805ee7 252 PIRSF PIRSF028069 1 252 8.9E-110 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL538_20470 fee6a7c5c1e5c9704a59dbad2d805ee7 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 1.0E-86 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL538_12670 b14c952c9e895ee21e40b9a2db0a39cb 665 SUPERFAMILY SSF52540 15 171 8.41E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12670 b14c952c9e895ee21e40b9a2db0a39cb 665 Gene3D G3DSA:3.40.50.300 12 187 8.5E-8 T 11-10-2018 AL538_09625 2854a8166d89a54f97d3befe2d859246 129 Pfam PF03899 ATP synthase I chain 15 111 4.6E-21 T 11-10-2018 IPR005598 ATP synthase protein I AL538_20165 57f19a217462f4d21d30edb9b5e9c989 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 3.2E-40 T 11-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AL538_07915 b60a590dcc9a20e627fd93bee2376239 131 Pfam PF02635 DsrE/DsrF-like family 6 131 5.0E-29 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein AL538_07915 b60a590dcc9a20e627fd93bee2376239 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 3.7E-56 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AL538_07915 b60a590dcc9a20e627fd93bee2376239 131 SUPERFAMILY SSF75169 6 131 4.71E-39 T 11-10-2018 IPR027396 DsrEFH-like AL538_07915 b60a590dcc9a20e627fd93bee2376239 131 Gene3D G3DSA:3.40.1260.10 1 131 2.1E-54 T 11-10-2018 IPR027396 DsrEFH-like AL538_23240 1af83a44730de9c60568378e70651f83 622 Pfam PF01435 Peptidase family M48 104 329 2.4E-27 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL538_23240 1af83a44730de9c60568378e70651f83 622 Gene3D G3DSA:3.30.2010.10 93 188 1.9E-32 T 11-10-2018 AL538_13290 af16e123de038d0d1d03090251d6179e 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.5E-116 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_13290 af16e123de038d0d1d03090251d6179e 283 Pfam PF00793 DAHP synthetase I family 10 275 1.2E-69 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_13290 af16e123de038d0d1d03090251d6179e 283 Gene3D G3DSA:3.20.20.70 1 283 7.8E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_13290 af16e123de038d0d1d03090251d6179e 283 SUPERFAMILY SSF51569 2 277 2.11E-104 T 11-10-2018 AL538_13290 af16e123de038d0d1d03090251d6179e 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.352 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AL538_26800 163c5afe3f9c57e65142116359327fd1 372 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 228 346 1.3E-18 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_26800 163c5afe3f9c57e65142116359327fd1 372 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 222 3.5E-26 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_26800 163c5afe3f9c57e65142116359327fd1 372 Gene3D G3DSA:2.40.160.60 22 372 4.2E-65 T 11-10-2018 AL538_26800 163c5afe3f9c57e65142116359327fd1 372 SUPERFAMILY SSF56935 22 368 1.28E-53 T 11-10-2018 AL538_14210 06abe9878ca96147fdcf0c7e45b2be0e 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.149 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AL538_14210 06abe9878ca96147fdcf0c7e45b2be0e 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 6.2E-154 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AL538_22820 1c45c93065ae6926d9baa145aace27b2 409 Pfam PF02687 FtsX-like permease family 292 397 4.1E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_02280 0246bb07ec7cab7a138f0013c9b1f8e0 85 SUPERFAMILY SSF143120 1 75 6.1E-17 T 11-10-2018 IPR036165 YefM-like superfamily AL538_02280 0246bb07ec7cab7a138f0013c9b1f8e0 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 11-10-2018 AL538_02280 0246bb07ec7cab7a138f0013c9b1f8e0 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.1E-15 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL538_02280 0246bb07ec7cab7a138f0013c9b1f8e0 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 11-10-2018 AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 SUPERFAMILY SSF103473 7 367 7.19E-49 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 Pfam PF07690 Major Facilitator Superfamily 19 341 5.8E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 PRINTS PR01035 Tetracycline resistance protein signature 294 314 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 PRINTS PR01035 Tetracycline resistance protein signature 4 20 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 PRINTS PR01035 Tetracycline resistance protein signature 127 149 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AL538_24765 54ac1c12fc40e9d45ff96bc492ad7bfc 373 Gene3D G3DSA:1.20.1720.10 7 371 2.2E-72 T 11-10-2018 AL538_18115 c3ee6f7caed1abeae76707dec58ee766 96 SUPERFAMILY SSF54909 1 80 2.53E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_18115 c3ee6f7caed1abeae76707dec58ee766 96 Gene3D G3DSA:3.30.70.100 1 90 6.2E-26 T 11-10-2018 AL538_18115 c3ee6f7caed1abeae76707dec58ee766 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 1.2E-17 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AL538_21255 6f0c2d376ee40ad36a789cd2a2b96659 125 Pfam PF08000 Bacterial PH domain 6 123 2.2E-40 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain AL538_21255 6f0c2d376ee40ad36a789cd2a2b96659 125 Gene3D G3DSA:2.30.29.50 4 125 2.0E-38 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily AL538_21255 6f0c2d376ee40ad36a789cd2a2b96659 125 SUPERFAMILY SSF50729 10 124 9.22E-40 T 11-10-2018 AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 2.0E-23 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 SUPERFAMILY SSF118001 1 69 2.48E-28 T 11-10-2018 IPR036685 YehU-like superfamily AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 Gene3D G3DSA:1.10.10.610 1 70 1.0E-29 T 11-10-2018 IPR036685 YehU-like superfamily AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 3.3E-34 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 PIRSF PIRSF006169 1 70 8.9E-36 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL538_07980 f89e3df38ee3b4a6f619eee7d56ef748 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.637 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 AL538_23585 548990ccb5430832d8f6fe37080cc163 181 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_23585 548990ccb5430832d8f6fe37080cc163 181 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.2E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_23585 548990ccb5430832d8f6fe37080cc163 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 3.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_23585 548990ccb5430832d8f6fe37080cc163 181 Gene3D G3DSA:3.30.700.10 7 180 3.4E-14 T 11-10-2018 AL538_23585 548990ccb5430832d8f6fe37080cc163 181 SUPERFAMILY SSF54523 7 57 5.49E-14 T 11-10-2018 AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 Gene3D G3DSA:3.40.50.300 1 240 2.6E-74 T 11-10-2018 AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 SUPERFAMILY SSF52540 5 243 1.06E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 Pfam PF08402 TOBE domain 276 341 1.7E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 Pfam PF00005 ABC transporter 20 164 1.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 SMART SM00382 29 214 2.0E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_06350 ccf64e5f755f1473f93d9bf476b407f9 343 SUPERFAMILY SSF50331 263 342 1.93E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AL538_01655 3d2b7a9539549df56aec365282ef7071 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 6.3E-39 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL538_01655 3d2b7a9539549df56aec365282ef7071 345 Gene3D G3DSA:3.90.850.10 1 345 2.4E-135 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_01655 3d2b7a9539549df56aec365282ef7071 345 SUPERFAMILY SSF56529 83 339 2.29E-55 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_03600 72ddaed5c9cc968c0b95b13af6124d01 427 Pfam PF02687 FtsX-like permease family 322 420 7.9E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_03600 72ddaed5c9cc968c0b95b13af6124d01 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 1.1E-26 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_16985 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 Gene3D G3DSA:2.30.110.20 2 168 6.9E-16 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_16985 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 Pfam PF05638 Type VI secretion system effector, Hcp 5 144 1.2E-18 T 11-10-2018 IPR008514 Type VI secretion system effector, Hcp AL538_16985 b52cdf3189c2e5ee10ecddc2a6c1a0e5 173 SUPERFAMILY SSF141452 1 167 1.03E-24 T 11-10-2018 IPR036624 Hcp1-like superfamily AL538_14775 adfd86a9572d86e90924c5525c723dad 158 Pfam PF05433 Glycine zipper 2TM domain 63 97 2.0E-8 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 Gene3D G3DSA:1.10.3080.10 32 468 3.4E-140 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 468 51.758 T 11-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 SUPERFAMILY SSF81340 30 453 1.7E-113 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 PRINTS PR00762 Chloride channel signature 102 119 7.3E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 PRINTS PR00762 Chloride channel signature 183 202 7.3E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 PRINTS PR00762 Chloride channel signature 387 403 7.3E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 PRINTS PR00762 Chloride channel signature 352 372 7.3E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 PRINTS PR00762 Chloride channel signature 405 424 7.3E-28 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_26080 e0ea5c6859c461f7317cdde1ac17e6be 468 Pfam PF00654 Voltage gated chloride channel 89 437 7.7E-95 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 AL538_06130 a1e1e7c89cdfc778b02d94ceb2a4ea1c 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_06130 a1e1e7c89cdfc778b02d94ceb2a4ea1c 337 Pfam PF01136 Peptidase family U32 75 336 2.4E-69 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_04265 5af1deabd66e5b663754a175e6cc78cc 397 Pfam PF03743 Bacterial conjugation TrbI-like protein 215 389 6.7E-43 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AL538_04265 5af1deabd66e5b663754a175e6cc78cc 397 Gene3D G3DSA:2.40.128.260 210 330 1.2E-35 T 11-10-2018 AL538_04265 5af1deabd66e5b663754a175e6cc78cc 397 Gene3D G3DSA:2.40.128.260 331 397 1.6E-6 T 11-10-2018 AL538_02255 4d48ff42482169c5730d04ed4318642f 143 Pfam PF13673 Acetyltransferase (GNAT) domain 53 126 2.2E-17 T 11-10-2018 IPR000182 GNAT domain AL538_02255 4d48ff42482169c5730d04ed4318642f 143 Gene3D G3DSA:3.40.630.30 3 143 3.1E-32 T 11-10-2018 AL538_02255 4d48ff42482169c5730d04ed4318642f 143 SUPERFAMILY SSF55729 2 142 4.08E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_04725 a2f4ac8e60de84ae275d98dae07a6c7b 83 Pfam PF04226 Transglycosylase associated protein 33 81 2.4E-13 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AL538_22975 bc67e696f9f891fe2e364e8ed03d2525 114 Pfam PF08888 HopJ type III effector protein 3 111 6.5E-50 T 11-10-2018 IPR014984 HopJ type III effector protein AL538_22975 bc67e696f9f891fe2e364e8ed03d2525 114 Gene3D G3DSA:3.20.160.10 1 114 1.2E-52 T 11-10-2018 IPR038604 Type III effector HopJ superfamily AL538_16905 8bad132dce31dd7b036e50e4990dd1b7 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 3.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_16905 8bad132dce31dd7b036e50e4990dd1b7 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 6.6E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_16420 af9ce8baf012e8c42797389b41fe8177 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AL538_16420 af9ce8baf012e8c42797389b41fe8177 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 40 456 9.9E-57 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_16420 af9ce8baf012e8c42797389b41fe8177 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 456 5.5E-110 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AL538_11035 707f50aeb93fbc39a519150350328429 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 2.0E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_11035 707f50aeb93fbc39a519150350328429 419 Pfam PF02687 FtsX-like permease family 317 410 1.9E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_22085 e2bfedd51bace2c01dc4f6445a120769 276 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 1.9E-57 T 11-10-2018 IPR018831 Uncharacterised protein family NKWYS AL538_22085 e2bfedd51bace2c01dc4f6445a120769 276 SUPERFAMILY SSF52540 18 244 2.66E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_12610 e6b492a5803d95b5bcdc7c31f2ce5a4d 148 Gene3D G3DSA:3.10.450.430 1 144 6.8E-27 T 11-10-2018 AL538_12610 e6b492a5803d95b5bcdc7c31f2ce5a4d 148 Pfam PF10980 Protein of unknown function (DUF2787) 18 138 1.5E-25 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_05200 54f78d708d574365c7a349c17b013ed5 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 4.3E-55 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 AL538_09040 5a2515339b165f3b76b5acda4fd9e0bd 126 SUPERFAMILY SSF54403 43 115 2.76E-17 T 11-10-2018 AL538_09040 5a2515339b165f3b76b5acda4fd9e0bd 126 Gene3D G3DSA:3.10.450.10 39 121 2.8E-10 T 11-10-2018 AL538_09040 5a2515339b165f3b76b5acda4fd9e0bd 126 Pfam PF00031 Cystatin domain 52 106 3.9E-9 T 11-10-2018 IPR000010 Cystatin domain GO:0004869 AL538_00215 9fddc343f61cd53c3225ce97982ae623 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 7.4E-25 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AL538_23115 9fddc343f61cd53c3225ce97982ae623 183 Pfam PF14316 Domain of unknown function (DUF4381) 15 156 7.4E-25 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AL538_18235 9c20a258ec4cb6a3ff9bceb8ab6406a8 102 SUPERFAMILY SSF54909 3 96 8.85E-34 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_18235 9c20a258ec4cb6a3ff9bceb8ab6406a8 102 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 4.5E-42 T 11-10-2018 IPR014910 Putative monooxygenase YdhR AL538_18235 9c20a258ec4cb6a3ff9bceb8ab6406a8 102 Gene3D G3DSA:3.30.70.100 1 102 7.6E-43 T 11-10-2018 AL538_18830 4b9a9b1afaccfdfc0e7fe9a9b113c884 329 Gene3D G3DSA:1.10.3720.10 68 324 1.5E-63 T 11-10-2018 IPR035906 MetI-like superfamily AL538_18830 4b9a9b1afaccfdfc0e7fe9a9b113c884 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 310 2.9E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_18830 4b9a9b1afaccfdfc0e7fe9a9b113c884 329 SUPERFAMILY SSF161098 72 313 8.76E-54 T 11-10-2018 IPR035906 MetI-like superfamily AL538_05740 a1c674a10d10e03264355fd0f29d137c 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 140 6.9E-48 T 11-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AL538_05740 a1c674a10d10e03264355fd0f29d137c 142 SUPERFAMILY SSF82649 4 141 8.37E-50 T 11-10-2018 AL538_05740 a1c674a10d10e03264355fd0f29d137c 142 Gene3D G3DSA:3.90.1010.10 1 142 2.6E-52 T 11-10-2018 AL538_05740 a1c674a10d10e03264355fd0f29d137c 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 4.9E-47 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AL538_17545 c1851b556cc5b8009ce8d521d69061bb 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 283 1.9E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17545 c1851b556cc5b8009ce8d521d69061bb 299 SUPERFAMILY SSF161098 99 281 9.03E-38 T 11-10-2018 IPR035906 MetI-like superfamily AL538_17545 c1851b556cc5b8009ce8d521d69061bb 299 Gene3D G3DSA:1.10.3720.10 95 288 3.1E-33 T 11-10-2018 IPR035906 MetI-like superfamily AL538_03630 f7fd6dfa2eb6e3e73d568c14ec330b07 169 Gene3D G3DSA:3.40.630.30 5 157 3.4E-13 T 11-10-2018 AL538_03630 f7fd6dfa2eb6e3e73d568c14ec330b07 169 SUPERFAMILY SSF55729 21 108 2.83E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_03630 f7fd6dfa2eb6e3e73d568c14ec330b07 169 Pfam PF00583 Acetyltransferase (GNAT) family 30 94 1.0E-8 T 11-10-2018 IPR000182 GNAT domain AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 SMART SM00642 13 374 7.8E-29 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 Gene3D G3DSA:3.20.20.80 9 379 1.1E-78 T 11-10-2018 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 SUPERFAMILY SSF51445 12 344 2.16E-61 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 PRINTS PR00110 Alpha-amylase signature 201 212 5.2E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 PRINTS PR00110 Alpha-amylase signature 55 72 5.2E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 PRINTS PR00110 Alpha-amylase signature 296 308 5.2E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 PRINTS PR00110 Alpha-amylase signature 230 248 5.2E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 PRINTS PR00110 Alpha-amylase signature 88 99 5.2E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AL538_26505 2e7d6c2ba7aaa749855b2d8de1898c01 449 Pfam PF00128 Alpha amylase, catalytic domain 33 236 1.4E-17 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AL538_17830 11720d146971992d2a17edb9a267bd34 143 SUPERFAMILY SSF102462 8 143 1.57E-35 T 11-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AL538_17830 11720d146971992d2a17edb9a267bd34 143 Pfam PF09391 Protein of unknown function (DUF2000) 10 143 5.1E-39 T 11-10-2018 IPR018988 Protein of unknown function DUF2000 AL538_17830 11720d146971992d2a17edb9a267bd34 143 Gene3D G3DSA:3.40.1490.10 8 142 7.8E-16 T 11-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 AL538_17830 11720d146971992d2a17edb9a267bd34 143 PIRSF PIRSF033736 4 143 4.8E-29 T 11-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 AL538_27380 66e6c1194f30c642b42370d7670ee932 301 SUPERFAMILY SSF103088 168 290 1.7E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_27380 66e6c1194f30c642b42370d7670ee932 301 PRINTS PR01021 OMPA domain signature 235 251 3.3E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_27380 66e6c1194f30c642b42370d7670ee932 301 PRINTS PR01021 OMPA domain signature 220 235 3.3E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_27380 66e6c1194f30c642b42370d7670ee932 301 PRINTS PR01021 OMPA domain signature 191 213 3.3E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AL538_27380 66e6c1194f30c642b42370d7670ee932 301 Gene3D G3DSA:3.30.1330.60 42 162 2.4E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_27380 66e6c1194f30c642b42370d7670ee932 301 Gene3D G3DSA:3.30.1330.60 174 291 2.6E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_27380 66e6c1194f30c642b42370d7670ee932 301 Pfam PF00691 OmpA family 62 156 2.3E-18 T 11-10-2018 IPR006665 OmpA-like domain AL538_27380 66e6c1194f30c642b42370d7670ee932 301 Pfam PF00691 OmpA family 191 285 1.8E-18 T 11-10-2018 IPR006665 OmpA-like domain AL538_27380 66e6c1194f30c642b42370d7670ee932 301 SUPERFAMILY SSF103088 52 162 1.57E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AL538_14630 dcb9f9e16a93d0a6f8aa923e2f415edc 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 4.5E-188 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AL538_14630 dcb9f9e16a93d0a6f8aa923e2f415edc 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.507 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 AL538_27510 d5079c25e001ab2df8fb634f7f7342d4 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 9.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 Gene3D G3DSA:1.20.1330.10 42 226 6.5E-31 T 11-10-2018 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 396 3.6E-5 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 396 1.3E-92 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 SUPERFAMILY SSF64518 1 396 5.75E-66 T 11-10-2018 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 3.8E-10 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13485 64f8148999f0f9ba5d5c1c484df17c19 396 Gene3D G3DSA:1.20.1330.10 266 371 1.5E-9 T 11-10-2018 AL538_19085 2d966a46c5e7b334baab996daaabde36 230 SMART SM01007 7 197 2.3E-65 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL538_19085 2d966a46c5e7b334baab996daaabde36 230 Gene3D G3DSA:3.40.225.10 1 229 2.9E-56 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL538_19085 2d966a46c5e7b334baab996daaabde36 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.7E-43 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AL538_19085 2d966a46c5e7b334baab996daaabde36 230 SUPERFAMILY SSF53639 2 220 6.67E-65 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 4.1E-82 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05060 f4dfdd74d086ef1d963150f3e3353c83 289 Pfam PF00813 FliP family 92 283 5.2E-79 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AL538_05685 ee8601f22499497a773cd687e8ec217a 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.1E-51 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG AL538_11070 4b7256666424c50756e455c1e57bd30a 1306 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 971 1305 2.2E-65 T 11-10-2018 IPR007452 Translocation and assembly module TamB AL538_13785 1e621b4fc7954f02dcb656c2c41d1ea0 262 SUPERFAMILY SSF52540 4 216 1.96E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_13785 1e621b4fc7954f02dcb656c2c41d1ea0 262 Pfam PF00005 ABC transporter 20 148 4.1E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_13785 1e621b4fc7954f02dcb656c2c41d1ea0 262 Gene3D G3DSA:3.40.50.300 1 239 3.5E-55 T 11-10-2018 AL538_13785 1e621b4fc7954f02dcb656c2c41d1ea0 262 SMART SM00382 29 199 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_04945 26bcc6eb7884e446de9ad74bcdd8a0af 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 6.4E-55 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL538_04945 26bcc6eb7884e446de9ad74bcdd8a0af 161 Gene3D G3DSA:1.10.8.640 20 104 4.3E-36 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AL538_25540 cbfdfe5940e30f564e0052edf9ead339 325 SUPERFAMILY SSF90257 172 285 2.88E-5 T 11-10-2018 AL538_20500 3ab197636d1dba719e203009093d4d46 281 Pfam PF02517 CAAX protease self-immunity 179 268 1.4E-20 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AL538_27720 c33b0d1ae170930d255dd56eb34b2cf5 51 Pfam PF11665 Protein of unknown function (DUF3265) 24 51 1.3E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 Gene3D G3DSA:1.10.287.70 142 239 4.4E-24 T 11-10-2018 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 Pfam PF00520 Ion transport protein 35 225 2.1E-16 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 Gene3D G3DSA:1.20.120.350 24 141 2.2E-16 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 PRINTS PR00169 Potassium channel signature 138 161 1.0E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 PRINTS PR00169 Potassium channel signature 198 224 1.0E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 PRINTS PR00169 Potassium channel signature 169 191 1.0E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AL538_11455 9138927634efcc9c1538a6d0043b2f76 272 SUPERFAMILY SSF81324 28 225 4.93E-49 T 11-10-2018 AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 Gene3D G3DSA:3.10.105.10 267 475 3.8E-83 T 11-10-2018 AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 4.7E-56 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 SUPERFAMILY SSF53850 34 491 6.52E-88 T 11-10-2018 AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 PIRSF PIRSF002741 3 498 1.4E-57 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AL538_15395 0ec7d8748311dfcf1bd195f36ef4b6c1 504 Gene3D G3DSA:3.40.190.10 73 487 3.8E-83 T 11-10-2018 AL538_25535 7ad5f74b2fb9b6a1c1f4a27b202164ee 247 Pfam PF13391 HNH endonuclease 145 197 3.5E-8 T 11-10-2018 IPR003615 HNH nuclease AL538_09910 dcd30d73162cb795ffd7c0da496154d3 325 Gene3D G3DSA:1.10.3720.10 84 314 3.7E-20 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09910 dcd30d73162cb795ffd7c0da496154d3 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 9.4E-40 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_09910 dcd30d73162cb795ffd7c0da496154d3 325 SUPERFAMILY SSF161098 90 302 1.08E-17 T 11-10-2018 IPR035906 MetI-like superfamily AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 SUPERFAMILY SSF143968 473 615 4.84E-36 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 SUPERFAMILY SSF50475 3 322 5.89E-122 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 Gene3D G3DSA:3.40.1670.10 479 583 3.5E-25 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 Gene3D G3DSA:3.40.1670.10 337 453 1.6E-46 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 SUPERFAMILY SSF143968 323 461 3.92E-53 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 568 3.3E-21 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 5.3E-162 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 Gene3D G3DSA:1.20.5.570 584 617 3.6E-15 T 11-10-2018 AL538_09205 450c68b1606b6bfcfbbfc49589506120 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 9.4E-165 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AL538_10435 bc8845f9ec0407ecd5744ee2bc906f0c 341 SUPERFAMILY SSF161098 107 321 2.75E-16 T 11-10-2018 IPR035906 MetI-like superfamily AL538_10435 bc8845f9ec0407ecd5744ee2bc906f0c 341 Gene3D G3DSA:1.10.3720.10 102 332 7.3E-19 T 11-10-2018 IPR035906 MetI-like superfamily AL538_10435 bc8845f9ec0407ecd5744ee2bc906f0c 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 9.6E-35 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_17900 422ad546811a885850dc45cfe9c74c3b 243 Gene3D G3DSA:1.10.150.690 29 119 1.1E-14 T 11-10-2018 AL538_17900 422ad546811a885850dc45cfe9c74c3b 243 Pfam PF09836 Putative DNA-binding domain 26 88 7.5E-10 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 SUPERFAMILY SSF103039 141 320 3.01E-29 T 11-10-2018 IPR028976 CheC-like superfamily AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 Gene3D G3DSA:3.40.1550.10 139 320 4.5E-23 T 11-10-2018 IPR028976 CheC-like superfamily AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 SUPERFAMILY SSF52172 1 114 1.02E-28 T 11-10-2018 IPR011006 CheY-like superfamily AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 SMART SM00448 1 113 6.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 Gene3D G3DSA:3.40.50.2300 1 133 2.9E-29 T 11-10-2018 AL538_00070 3596aa4c192021f323cb07c73df6bda0 322 Pfam PF00072 Response regulator receiver domain 3 110 3.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_28615 df1e599a832ce983423a16d844447da8 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 2.1E-24 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 AL538_28615 df1e599a832ce983423a16d844447da8 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 7.4E-24 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.0E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 SUPERFAMILY SSF46689 2 63 8.72E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 Gene3D G3DSA:1.10.357.10 1 178 8.7E-30 T 11-10-2018 AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 SUPERFAMILY SSF48498 76 172 2.33E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_03625 982e6c946d0c29342ac22e9de697fd97 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_07310 89909258421b1e9c6082502b9a221043 421 SUPERFAMILY SSF55205 6 418 7.19E-142 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AL538_07310 89909258421b1e9c6082502b9a221043 421 Gene3D G3DSA:3.65.10.10 22 229 1.6E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL538_07310 89909258421b1e9c6082502b9a221043 421 Gene3D G3DSA:3.65.10.10 12 414 1.6E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AL538_07310 89909258421b1e9c6082502b9a221043 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.815 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_07310 89909258421b1e9c6082502b9a221043 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 2.0E-122 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AL538_07310 89909258421b1e9c6082502b9a221043 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 3.7E-182 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AL538_00745 a73e4802bbee2ebcdacaf04cc73d4c5f 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 4.9E-55 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain AL538_15480 49e5745d4cf404b001a1df0c8aa2b378 329 Pfam PF03547 Membrane transport protein 175 318 1.0E-12 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AL538_25060 b2a450df59d457c91895483325ac822f 110 Gene3D G3DSA:3.10.450.40 23 86 8.0E-9 T 11-10-2018 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 SUPERFAMILY SSF161070 10 453 9.15E-118 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 7.0E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 4.1E-21 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_05600 d0138495d1b971313f11fbba2ce4a329 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AL538_06900 f1b4e7b2267b6d224d320948b170a3f4 231 Gene3D G3DSA:3.30.110.170 32 228 2.5E-48 T 11-10-2018 AL538_06900 f1b4e7b2267b6d224d320948b170a3f4 231 Gene3D G3DSA:3.30.70.2970 42 149 2.5E-48 T 11-10-2018 AL538_06900 f1b4e7b2267b6d224d320948b170a3f4 231 Pfam PF04402 Protein of unknown function (DUF541) 30 228 2.9E-40 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AL538_12310 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AL538_12310 b94fb7376bbc82844226b347d4bc02c0 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC AL538_12310 b94fb7376bbc82844226b347d4bc02c0 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 3.3E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC AL538_12310 b94fb7376bbc82844226b347d4bc02c0 109 SMART SM01323 17 101 2.3E-38 T 11-10-2018 IPR003849 Preprotein translocase YajC AL538_12310 b94fb7376bbc82844226b347d4bc02c0 109 Pfam PF02699 Preprotein translocase subunit 21 98 6.0E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC AL538_18760 75d4ae6f6d2df9a1db4fdd41a8e4fdf3 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 8.3E-123 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AL538_18760 75d4ae6f6d2df9a1db4fdd41a8e4fdf3 279 Gene3D G3DSA:3.40.50.1820 3 278 2.9E-97 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18760 75d4ae6f6d2df9a1db4fdd41a8e4fdf3 279 SUPERFAMILY SSF53474 4 277 1.61E-91 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_18760 75d4ae6f6d2df9a1db4fdd41a8e4fdf3 279 Pfam PF00756 Putative esterase 23 271 7.5E-63 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 SMART SM00342 171 253 8.6E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 Gene3D G3DSA:1.10.10.60 215 258 6.8E-8 T 11-10-2018 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 SUPERFAMILY SSF51182 30 80 1.09E-6 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 Pfam PF02311 AraC-like ligand binding domain 18 93 8.2E-6 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 SUPERFAMILY SSF46689 207 255 7.62E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 Gene3D G3DSA:1.10.10.60 168 214 1.3E-9 T 11-10-2018 AL538_24770 78a4a5c7f33c337511025d5ee5b4c90a 259 Pfam PF12833 Helix-turn-helix domain 178 254 5.9E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_01975 76c2b8ca2ee0074c6569435efd394ec8 226 Pfam PF08856 Protein of unknown function (DUF1826) 27 224 7.5E-65 T 11-10-2018 IPR014955 Protein of unknown function DUF1826 AL538_14065 a72ada4f5b91f9bd1fdcb75758abb6a5 148 Gene3D G3DSA:3.10.129.10 8 144 5.4E-25 T 11-10-2018 AL538_14065 a72ada4f5b91f9bd1fdcb75758abb6a5 148 Pfam PF13279 Thioesterase-like superfamily 19 124 6.5E-13 T 11-10-2018 AL538_14065 a72ada4f5b91f9bd1fdcb75758abb6a5 148 SUPERFAMILY SSF54637 9 144 1.06E-30 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 PRINTS PR00313 NodO calcium binding signature 6783 6794 2.1E-5 T 11-10-2018 AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 PRINTS PR00313 NodO calcium binding signature 6813 6822 2.1E-5 T 11-10-2018 AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 PRINTS PR00313 NodO calcium binding signature 6795 6803 2.1E-5 T 11-10-2018 AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 PRINTS PR00313 NodO calcium binding signature 6804 6812 2.1E-5 T 11-10-2018 AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 6833 6922 1.1E-11 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6791 6809 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 815 955 7.3E-56 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1387 1527 1.6E-53 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 672 812 2.4E-53 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2102 2242 4.7E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2960 3100 1.5E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2245 2385 6.9E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3986 4131 8.4E-46 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2388 2528 1.4E-53 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3389 3530 3.6E-50 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2531 2671 1.4E-53 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1673 1813 9.6E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1959 2099 7.9E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1816 1956 2.7E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3246 3384 8.1E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3535 3680 1.0E-40 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1530 1670 9.0E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 958 1098 2.3E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2817 2956 7.1E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 4139 4283 3.0E-41 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3688 3835 1.8E-43 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 4289 4421 1.4E-47 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3103 3243 2.1E-56 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1244 1384 2.7E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1101 1241 2.6E-54 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3837 3978 3.6E-40 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2674 2814 5.0E-55 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 511 668 6.8E-30 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 Gene3D G3DSA:2.150.10.10 6766 6906 3.6E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 SUPERFAMILY SSF51120 6705 6857 6.8E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1443 1514 0.0011 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1585 1657 0.0017 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2872 2944 0.0011 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1299 1371 2.5E-4 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2158 2229 5.4E-5 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1158 1228 1.4E-4 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2014 2086 4.9E-4 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 3015 3087 0.0014 T 11-10-2018 IPR010221 VCBS repeat AL538_23010 bffdebaf3f32a9be6be9d9a827f66381 6925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 6800 6818 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site AL538_01835 53e20a41f3495305b00c9cb0bb062fbd 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.8E-10 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AL538_01835 53e20a41f3495305b00c9cb0bb062fbd 171 Gene3D G3DSA:3.30.2010.10 66 163 7.3E-6 T 11-10-2018 AL538_12165 51ae03feb3d351c1abb0ec63c4e5236c 110 SUPERFAMILY SSF55331 1 110 7.33E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL538_12165 51ae03feb3d351c1abb0ec63c4e5236c 110 Gene3D G3DSA:3.30.429.10 1 110 2.4E-42 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AL538_12165 51ae03feb3d351c1abb0ec63c4e5236c 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 3.2E-36 T 11-10-2018 IPR015017 Protein of unknown function DUF1904 AL538_00510 730cd88cd8f1754d2a49f6a1b01345c8 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.8E-43 T 11-10-2018 IPR020979 Uncharacterised protein family A0KLC6 AL538_04990 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_04990 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AL538_04990 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 11-10-2018 AL538_04990 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AL538_04990 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 11-10-2018 AL538_01875 075844d4c6d2b8c42118d368a2103a4c 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 2.0E-66 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 AL538_05500 d514e24a46950e386dd868db5106c6e0 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 6.5E-36 T 11-10-2018 IPR023376 YqcC-like domain AL538_05500 d514e24a46950e386dd868db5106c6e0 104 SUPERFAMILY SSF158452 1 103 3.79E-38 T 11-10-2018 IPR036814 YqcC-like superfamily AL538_05500 d514e24a46950e386dd868db5106c6e0 104 PIRSF PIRSF006257 1 104 2.7E-43 T 11-10-2018 IPR007384 Protein of unknown function UCP006257 AL538_05500 d514e24a46950e386dd868db5106c6e0 104 Gene3D G3DSA:1.20.1440.40 1 104 3.3E-35 T 11-10-2018 IPR036814 YqcC-like superfamily AL538_09015 8ccf25cb3d445aa632dc50ac4fd65f8e 74 Pfam PF10678 Protein of unknown function (DUF2492) 4 73 3.0E-23 T 11-10-2018 IPR019620 Putative metal-binding protein AL538_09015 8ccf25cb3d445aa632dc50ac4fd65f8e 74 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 74 2.9E-24 T 11-10-2018 IPR019620 Putative metal-binding protein AL538_23565 81ee76713a136d4cc544c475390fc154 639 Gene3D G3DSA:1.10.287.950 308 639 1.2E-65 T 11-10-2018 AL538_23565 81ee76713a136d4cc544c475390fc154 639 SMART SM00283 376 637 9.0E-68 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_23565 81ee76713a136d4cc544c475390fc154 639 SUPERFAMILY SSF58104 335 638 3.01E-69 T 11-10-2018 AL538_23565 81ee76713a136d4cc544c475390fc154 639 SMART SM01358 41 279 1.2E-8 T 11-10-2018 IPR032255 Helical bimodular sensor domain AL538_23565 81ee76713a136d4cc544c475390fc154 639 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 602 9.3E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_26870 324f95a0eb53594c9181e4841d079907 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 233 1.8E-39 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL538_26870 324f95a0eb53594c9181e4841d079907 250 Gene3D G3DSA:3.20.20.190 1 240 8.8E-75 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_26870 324f95a0eb53594c9181e4841d079907 250 SUPERFAMILY SSF51695 2 233 3.66E-69 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_18625 52f4f2241263f0d35ea972af950ca514 83 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 8 77 9.2E-37 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AL538_18625 52f4f2241263f0d35ea972af950ca514 83 Pfam PF10985 Protein of unknown function (DUF2805) 9 79 4.1E-36 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 AL538_21095 f7f52d59eee25788f21aed5f9ba6442e 597 SUPERFAMILY SSF51735 399 493 8.44E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_21095 f7f52d59eee25788f21aed5f9ba6442e 597 Gene3D G3DSA:1.20.1530.20 6 389 1.3E-11 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL538_21095 f7f52d59eee25788f21aed5f9ba6442e 597 Pfam PF02254 TrkA-N domain 399 490 1.8E-7 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AL538_21095 f7f52d59eee25788f21aed5f9ba6442e 597 Pfam PF00999 Sodium/hydrogen exchanger family 16 387 1.5E-31 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL538_21095 f7f52d59eee25788f21aed5f9ba6442e 597 Gene3D G3DSA:3.40.50.720 397 509 1.4E-9 T 11-10-2018 AL538_26570 0f80e0ec5453eee68256f5f164ca057c 345 SUPERFAMILY SSF81345 5 339 1.57E-84 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_26570 0f80e0ec5453eee68256f5f164ca057c 345 Gene3D G3DSA:1.10.3470.10 5 344 1.5E-106 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_26570 0f80e0ec5453eee68256f5f164ca057c 345 Pfam PF01032 FecCD transport family 19 338 2.0E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Gene3D G3DSA:1.20.1330.10 45 174 7.0E-71 T 11-10-2018 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Gene3D G3DSA:1.20.1330.10 292 343 1.3E-46 T 11-10-2018 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Gene3D G3DSA:1.20.58.1830 349 383 1.3E-46 T 11-10-2018 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Gene3D G3DSA:1.20.58.1830 5 33 7.0E-71 T 11-10-2018 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Pfam PF07196 Flagellin hook IN motif 195 252 2.9E-10 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.0E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 SUPERFAMILY SSF64518 1 384 2.62E-97 T 11-10-2018 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 PRINTS PR00207 Flagellin signature 111 134 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 PRINTS PR00207 Flagellin signature 37 54 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 PRINTS PR00207 Flagellin signature 76 95 1.2E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AL538_13490 ebdd19671a0c3ae67c2900ec2da8ed45 384 Gene3D G3DSA:2.170.280.10 211 291 1.3E-46 T 11-10-2018 AL538_03560 fd163dc61c547a2d0d2466078379abb4 297 Pfam PF00892 EamA-like transporter family 3 127 3.0E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_03560 fd163dc61c547a2d0d2466078379abb4 297 Pfam PF00892 EamA-like transporter family 140 274 4.1E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_03560 fd163dc61c547a2d0d2466078379abb4 297 SUPERFAMILY SSF103481 173 282 3.79E-6 T 11-10-2018 AL538_25230 9e39f358b5d141c3b94b954649d860bb 144 Pfam PF00583 Acetyltransferase (GNAT) family 22 121 1.2E-15 T 11-10-2018 IPR000182 GNAT domain AL538_25230 9e39f358b5d141c3b94b954649d860bb 144 SUPERFAMILY SSF55729 1 142 6.71E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_25230 9e39f358b5d141c3b94b954649d860bb 144 Gene3D G3DSA:3.40.630.30 1 143 1.5E-30 T 11-10-2018 AL538_15085 c6203fb7269747d7d95041fc3f2fd675 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-67 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL538_15085 c6203fb7269747d7d95041fc3f2fd675 149 Pfam PF06610 L-alanine exporter 8 142 8.0E-70 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL538_15085 c6203fb7269747d7d95041fc3f2fd675 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.189 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 AL538_06055 3bbeac338123761e7e127c19e99d33b5 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 1.9E-38 T 11-10-2018 IPR019305 Uncharacterised protein family Smp AL538_14565 1c157cba46fed98628a78353edc087db 270 Pfam PF10972 Peptidoglycan-binding protein, CsiV 20 269 3.2E-65 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV AL538_21365 a2b92bed0226a8d015852c18091b9cf3 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 2.0E-9 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) AL538_21365 a2b92bed0226a8d015852c18091b9cf3 272 SUPERFAMILY SSF101801 198 262 6.15E-9 T 11-10-2018 IPR036429 SpoA-like superfamily AL538_25710 5f4cbd04033a8caecda949cf1a39b65a 245 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 5.7E-54 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL538_25710 5f4cbd04033a8caecda949cf1a39b65a 245 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 2.3E-57 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL538_23340 d3f22bbfc0dec43d269ab5377346c74d 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 6.0E-71 T 11-10-2018 IPR018683 Domain of unknown function DUF2169 AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Gene3D G3DSA:2.40.10.410 291 377 5.8E-38 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 3.6E-28 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Gene3D G3DSA:3.40.50.10610 114 290 1.5E-56 T 11-10-2018 AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 1.7E-42 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Gene3D G3DSA:3.30.1660.40 24 113 1.8E-36 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily AL538_13395 f8a1bc99576eadc00815fb025974f3a3 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 7.3E-27 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal AL538_24190 34afbba97e339fcdd4183e5a04d7c0ae 551 SUPERFAMILY SSF52540 227 410 1.7E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24190 34afbba97e339fcdd4183e5a04d7c0ae 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 1.8E-186 T 11-10-2018 IPR019195 ABC transporter, ATPase, putative AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 SUPERFAMILY SSF53178 5 194 3.14E-69 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 1.3E-68 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 4.8E-53 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 Gene3D G3DSA:3.40.50.1470 1 196 1.3E-76 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AL538_13245 38570e3932dec1b04fbacfc99e985e65 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.602 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AL538_20315 14b685a48f2109d15761ba083acfe273 447 SUPERFAMILY SSF111283 8 445 6.67E-94 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL538_20315 14b685a48f2109d15761ba083acfe273 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 2.2E-44 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL538_20315 14b685a48f2109d15761ba083acfe273 447 Gene3D G3DSA:3.30.2290.10 4 213 1.1E-33 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL538_07780 a86138f92fd40e2f60ca9b9dbf25ab0f 191 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 4.6E-11 T 11-10-2018 IPR007813 Fimbrial assembly PilN AL538_25920 7f0292f118967946d4fce3e1117bdd87 420 Pfam PF01979 Amidohydrolase family 52 413 1.1E-34 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AL538_25920 7f0292f118967946d4fce3e1117bdd87 420 SUPERFAMILY SSF51556 56 364 7.31E-72 T 11-10-2018 IPR032466 Metal-dependent hydrolase AL538_25920 7f0292f118967946d4fce3e1117bdd87 420 Gene3D G3DSA:3.20.20.140 57 372 3.0E-124 T 11-10-2018 AL538_25920 7f0292f118967946d4fce3e1117bdd87 420 SUPERFAMILY SSF51338 2 416 1.38E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_25920 7f0292f118967946d4fce3e1117bdd87 420 Gene3D G3DSA:2.30.40.10 7 414 3.0E-124 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AL538_07305 fb188daea4de5cb68005279b20e2784e 241 SUPERFAMILY SSF69593 4 235 4.71E-56 T 11-10-2018 AL538_07305 fb188daea4de5cb68005279b20e2784e 241 Pfam PF01553 Acyltransferase 58 180 7.3E-31 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_07305 fb188daea4de5cb68005279b20e2784e 241 SMART SM00563 67 182 6.1E-40 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_07305 fb188daea4de5cb68005279b20e2784e 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 4.5E-43 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 AL538_01795 34ab4b3bcc4bee4172efbeaca243ff4f 357 Gene3D G3DSA:3.40.190.10 137 341 3.4E-117 T 11-10-2018 AL538_01795 34ab4b3bcc4bee4172efbeaca243ff4f 357 SUPERFAMILY SSF53850 25 355 8.58E-58 T 11-10-2018 AL538_01795 34ab4b3bcc4bee4172efbeaca243ff4f 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 318 1.6E-32 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein AL538_01795 34ab4b3bcc4bee4172efbeaca243ff4f 357 Gene3D G3DSA:3.40.190.10 30 335 3.4E-117 T 11-10-2018 AL538_27470 ea8ffd6c35c7e5d7b009a881d710a138 45 Pfam PF11665 Protein of unknown function (DUF3265) 16 41 5.3E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_17240 57589b7613b1f05ce678f6948624fb40 308 Pfam PF01882 Protein of unknown function DUF58 54 138 2.1E-20 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AL538_09715 3abd9aaa9f8fdacd30e15cf536c25e59 417 SUPERFAMILY SSF53383 13 411 9.28E-62 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_09715 3abd9aaa9f8fdacd30e15cf536c25e59 417 Pfam PF00155 Aminotransferase class I and II 67 399 6.5E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_09715 3abd9aaa9f8fdacd30e15cf536c25e59 417 Gene3D G3DSA:3.40.640.10 1 415 2.4E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_16610 d14bb6b6ec2534a9d6fb2e483ec13d19 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 9.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_16610 d14bb6b6ec2534a9d6fb2e483ec13d19 163 SUPERFAMILY SSF54523 7 149 3.45E-13 T 11-10-2018 AL538_16610 d14bb6b6ec2534a9d6fb2e483ec13d19 163 Gene3D G3DSA:3.30.700.10 7 111 2.3E-11 T 11-10-2018 AL538_16610 d14bb6b6ec2534a9d6fb2e483ec13d19 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 3.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_03430 1e264cdd7933894a9c70517edf94a4ae 98 SUPERFAMILY SSF54909 1 98 3.75E-32 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AL538_03430 1e264cdd7933894a9c70517edf94a4ae 98 Pfam PF03795 YCII-related domain 1 95 7.2E-30 T 11-10-2018 IPR005545 YCII-related AL538_03430 1e264cdd7933894a9c70517edf94a4ae 98 Gene3D G3DSA:3.30.70.1060 1 98 2.6E-38 T 11-10-2018 AL538_27930 03a33b3fedfd4cd5dd49ec3e9e415500 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 3.3E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_21900 67fd973b03bf26f39e7e6eadde339c4c 441 Pfam PF13641 Glycosyltransferase like family 2 64 297 1.6E-17 T 11-10-2018 AL538_21900 67fd973b03bf26f39e7e6eadde339c4c 441 SUPERFAMILY SSF53448 61 345 3.52E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_21900 67fd973b03bf26f39e7e6eadde339c4c 441 Gene3D G3DSA:3.90.550.10 52 282 1.1E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_19665 820b072fb04d69203962ce878ef02f6c 386 SUPERFAMILY SSF48208 21 386 2.12E-89 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_19665 820b072fb04d69203962ce878ef02f6c 386 Pfam PF07470 Glycosyl Hydrolase Family 88 55 377 3.8E-25 T 11-10-2018 IPR010905 Glycosyl hydrolase, family 88 AL538_19665 820b072fb04d69203962ce878ef02f6c 386 Gene3D G3DSA:1.50.10.10 2 386 5.9E-115 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AL538_18535 facc3c5c2d89a8896ea564c7093212f4 236 SUPERFAMILY SSF56784 3 232 4.35E-24 T 11-10-2018 IPR036412 HAD-like superfamily AL538_18535 facc3c5c2d89a8896ea564c7093212f4 236 Gene3D G3DSA:3.40.50.1000 76 235 3.6E-21 T 11-10-2018 IPR023214 HAD superfamily AL538_18535 facc3c5c2d89a8896ea564c7093212f4 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 3.0E-18 T 11-10-2018 AL538_10460 2a5ebf4072b28a3226f386b6941bbccd 141 PIRSF PIRSF029598 3 135 2.5E-39 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 AL538_10460 2a5ebf4072b28a3226f386b6941bbccd 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 1.5E-14 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL538_14220 7390cd30c949900dbacb86e6241d51a3 223 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.6E-27 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL538_07380 1c889751a06b083768b5c518f3ed4c8a 148 SUPERFAMILY SSF55804 1 145 2.09E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_07380 1c889751a06b083768b5c518f3ed4c8a 148 Gene3D G3DSA:3.40.930.10 1 148 3.2E-53 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_07380 1c889751a06b083768b5c518f3ed4c8a 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_07380 1c889751a06b083768b5c518f3ed4c8a 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 3.6E-38 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_07380 1c889751a06b083768b5c518f3ed4c8a 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 2.0E-52 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AL538_25925 7c61e641f918323549b5196cdb80d6c7 406 SUPERFAMILY SSF82171 11 374 4.71E-14 T 11-10-2018 AL538_25925 7c61e641f918323549b5196cdb80d6c7 406 Gene3D G3DSA:2.120.10.30 155 389 1.0E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_25925 7c61e641f918323549b5196cdb80d6c7 406 Pfam PF07676 WD40-like Beta Propeller Repeat 297 314 0.093 T 11-10-2018 IPR011659 WD40-like Beta Propeller AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 Gene3D G3DSA:3.40.50.2000 5 474 5.4E-194 T 11-10-2018 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 Gene3D G3DSA:3.40.50.2000 475 797 3.3E-137 T 11-10-2018 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 SUPERFAMILY SSF53756 8 815 0.0 T 11-10-2018 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL538_18335 3247d55d3f91606451870e5ec666e4d4 817 PIRSF PIRSF000460 1 817 6.0E-211 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AL538_26245 aa7adafd625ba7cf2701d7b63563b790 204 Gene3D G3DSA:3.90.850.10 7 201 5.3E-45 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_26245 aa7adafd625ba7cf2701d7b63563b790 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 7.3E-26 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AL538_26245 aa7adafd625ba7cf2701d7b63563b790 204 SUPERFAMILY SSF56529 11 187 2.62E-45 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AL538_24975 454d9c9fc4c0bc4c6ade6343d10aca8c 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 2.5E-99 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AL538_24975 454d9c9fc4c0bc4c6ade6343d10aca8c 366 Gene3D G3DSA:3.20.20.70 1 365 1.1E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_24975 454d9c9fc4c0bc4c6ade6343d10aca8c 366 SUPERFAMILY SSF51395 3 364 1.78E-126 T 11-10-2018 AL538_15730 d5f327005da6ea6e2f692f0a393af953 436 SUPERFAMILY SSF51905 7 418 4.86E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_15730 d5f327005da6ea6e2f692f0a393af953 436 Pfam PF01593 Flavin containing amine oxidoreductase 16 308 9.2E-18 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AL538_15730 d5f327005da6ea6e2f692f0a393af953 436 Gene3D G3DSA:3.50.50.60 3 304 1.2E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_24565 54659a67383f45bea00864c7dd860311 386 SUPERFAMILY SSF103473 18 374 1.02E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_24565 54659a67383f45bea00864c7dd860311 386 Gene3D G3DSA:1.20.1250.20 202 383 2.1E-9 T 11-10-2018 AL538_24565 54659a67383f45bea00864c7dd860311 386 Pfam PF07690 Major Facilitator Superfamily 19 343 1.3E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_24565 54659a67383f45bea00864c7dd860311 386 Gene3D G3DSA:1.20.1250.20 13 194 1.2E-16 T 11-10-2018 AL538_24050 648fe3d472b780dbd2af02eb6db5885e 262 SUPERFAMILY SSF141868 28 257 6.28E-41 T 11-10-2018 IPR035919 EAL domain superfamily AL538_24050 648fe3d472b780dbd2af02eb6db5885e 262 Gene3D G3DSA:3.20.20.450 10 261 1.1E-41 T 11-10-2018 IPR035919 EAL domain superfamily AL538_24050 648fe3d472b780dbd2af02eb6db5885e 262 SMART SM00052 18 255 3.9E-10 T 11-10-2018 IPR001633 EAL domain AL538_24050 648fe3d472b780dbd2af02eb6db5885e 262 Pfam PF00563 EAL domain 24 250 7.1E-41 T 11-10-2018 IPR001633 EAL domain AL538_16295 3b5707345c4f119164e40445b748406d 548 Gene3D G3DSA:3.90.1150.170 51 524 9.5E-114 T 11-10-2018 AL538_16295 3b5707345c4f119164e40445b748406d 548 SUPERFAMILY SSF53383 27 530 5.98E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_16295 3b5707345c4f119164e40445b748406d 548 Gene3D G3DSA:3.40.640.10 122 387 9.5E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_16295 3b5707345c4f119164e40445b748406d 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 4.3E-298 T 11-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AL538_16295 3b5707345c4f119164e40445b748406d 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 7.9E-56 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 AL538_09440 1207d1324d8ef2546d35b521b1b738a4 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.596 T 11-10-2018 IPR007456 Smg AL538_09440 1207d1324d8ef2546d35b521b1b738a4 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 6.6E-59 T 11-10-2018 IPR007456 Smg AL538_26940 9f2f79a83b92ddeec375b4088f5d5e7c 282 Gene3D G3DSA:3.40.1090.10 2 88 1.1E-8 T 11-10-2018 AL538_26940 9f2f79a83b92ddeec375b4088f5d5e7c 282 Gene3D G3DSA:3.40.1090.10 91 209 2.3E-8 T 11-10-2018 AL538_26940 9f2f79a83b92ddeec375b4088f5d5e7c 282 SUPERFAMILY SSF52151 6 230 9.68E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL538_26940 9f2f79a83b92ddeec375b4088f5d5e7c 282 Pfam PF01734 Patatin-like phospholipase 9 175 8.1E-18 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AL538_11255 379ffc8b205be995f7eb807b50ebe35e 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 1.6E-104 T 11-10-2018 IPR005262 Conserved hypothetical protein CHP00661 AL538_11255 379ffc8b205be995f7eb807b50ebe35e 348 SUPERFAMILY SSF53756 8 291 2.59E-10 T 11-10-2018 AL538_11255 379ffc8b205be995f7eb807b50ebe35e 348 Gene3D G3DSA:3.40.50.2000 199 318 5.1E-6 T 11-10-2018 AL538_11255 379ffc8b205be995f7eb807b50ebe35e 348 Pfam PF13528 Glycosyl transferase family 1 1 300 3.7E-37 T 11-10-2018 AL538_27545 e16c259335b55867dd9998836623bc59 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 3.0E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_11410 1a24f59171a68a67f373bf2000888756 160 Gene3D G3DSA:3.30.70.560 1 153 1.1E-32 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_11410 1a24f59171a68a67f373bf2000888756 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.9E-27 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_11410 1a24f59171a68a67f373bf2000888756 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.3E-24 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_11410 1a24f59171a68a67f373bf2000888756 160 SUPERFAMILY SSF55083 1 149 8.89E-38 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AL538_14110 39cd8fe05b657a393c2937733a9df95f 241 SUPERFAMILY SSF53901 33 163 1.03E-6 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_14110 39cd8fe05b657a393c2937733a9df95f 241 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 238 6.8E-76 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AL538_01985 e6189e7442bfd049a13c534691369dff 124 Pfam PF03788 LrgA family 25 115 7.6E-26 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 AL538_01985 e6189e7442bfd049a13c534691369dff 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.687 T 11-10-2018 IPR022957 Uncharacterised protein family UPF0299 AL538_25165 a4da72d65137effd2e7adcc252070d74 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 1.5E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AL538_25165 a4da72d65137effd2e7adcc252070d74 204 Gene3D G3DSA:1.20.1050.10 83 199 6.4E-29 T 11-10-2018 AL538_25165 a4da72d65137effd2e7adcc252070d74 204 SUPERFAMILY SSF52833 1 89 3.19E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_25165 a4da72d65137effd2e7adcc252070d74 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 199 1.1E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AL538_25165 a4da72d65137effd2e7adcc252070d74 204 Gene3D G3DSA:3.40.30.10 1 77 3.1E-21 T 11-10-2018 AL538_25165 a4da72d65137effd2e7adcc252070d74 204 SUPERFAMILY SSF47616 72 203 7.94E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AL538_14510 a6dff5350fd5fc046fa7ad401b59874c 252 SUPERFAMILY SSF53167 4 251 3.93E-72 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_14510 a6dff5350fd5fc046fa7ad401b59874c 252 Gene3D G3DSA:3.40.50.1580 1 252 5.5E-81 T 11-10-2018 AL538_14510 a6dff5350fd5fc046fa7ad401b59874c 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 7.6E-111 T 11-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 AL538_14510 a6dff5350fd5fc046fa7ad401b59874c 252 Pfam PF01048 Phosphorylase superfamily 20 244 2.4E-40 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_14510 a6dff5350fd5fc046fa7ad401b59874c 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 AL538_24585 0b16f431bc4054b8a590c0a42dc39a79 169 Gene3D G3DSA:3.40.630.30 1 165 1.2E-39 T 11-10-2018 AL538_24585 0b16f431bc4054b8a590c0a42dc39a79 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 6.2E-28 T 11-10-2018 IPR000182 GNAT domain AL538_24585 0b16f431bc4054b8a590c0a42dc39a79 169 SUPERFAMILY SSF55729 2 153 6.23E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_05265 7fbadd3e789e8c50e11545a75e2ce248 84 Gene3D G3DSA:3.30.110.40 2 77 3.4E-6 T 11-10-2018 IPR036868 TusA-like domain superfamily AL538_05265 7fbadd3e789e8c50e11545a75e2ce248 84 SUPERFAMILY SSF64307 4 71 7.33E-8 T 11-10-2018 IPR036868 TusA-like domain superfamily AL538_05265 7fbadd3e789e8c50e11545a75e2ce248 84 Pfam PF01206 Sulfurtransferase TusA 6 71 4.1E-9 T 11-10-2018 IPR001455 TusA-like domain AL538_23780 f5387f6aecee6fe4aff003917efee4ab 146 SUPERFAMILY SSF54427 25 145 2.99E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_23780 f5387f6aecee6fe4aff003917efee4ab 146 Gene3D G3DSA:3.10.450.50 28 146 7.4E-26 T 11-10-2018 AL538_23780 f5387f6aecee6fe4aff003917efee4ab 146 Pfam PF14534 Domain of unknown function (DUF4440) 29 137 4.8E-10 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 TIGRFAM TIGR00277 HDIG: HDIG domain 247 337 6.5E-8 T 11-10-2018 IPR006675 HDIG domain AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 SUPERFAMILY SSF109604 237 388 4.47E-33 T 11-10-2018 AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 SMART SM00471 243 378 3.5E-11 T 11-10-2018 IPR003607 HD/PDEase domain AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 SMART SM00471 29 158 3.4 T 11-10-2018 IPR003607 HD/PDEase domain AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 Pfam PF01966 HD domain 247 368 4.1E-18 T 11-10-2018 IPR006674 HD domain AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 Pfam PF01966 HD domain 35 123 2.5E-5 T 11-10-2018 IPR006674 HD domain AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 SUPERFAMILY SSF109604 24 192 6.62E-16 T 11-10-2018 AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 Gene3D G3DSA:1.10.3210.10 234 418 7.7E-52 T 11-10-2018 AL538_16530 d0e91abf17afcb3099d74619bf813ff7 419 Gene3D G3DSA:1.10.3210.10 18 197 1.0E-19 T 11-10-2018 AL538_27710 ea9e16af50d3841207754e4c8e2c5fe3 44 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 4.6E-10 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_24550 4e2bbd389d91f9a2585f515e04174c4f 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 419 5.5E-62 T 11-10-2018 IPR010869 Protein of unknown function DUF1501 AL538_24550 4e2bbd389d91f9a2585f515e04174c4f 441 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 4.4E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL538_02695 e32ad3edc4223ee2f89affaf3322a614 117 Gene3D G3DSA:3.10.180.10 1 116 4.3E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_02695 e32ad3edc4223ee2f89affaf3322a614 117 SUPERFAMILY SSF54593 1 112 1.79E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_14145 8804e1e323355dbdcf039f4c554a5495 368 SUPERFAMILY SSF159501 54 167 4.01E-6 T 11-10-2018 AL538_26605 8a7c76db5057a7521430e2034c6f0ca1 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 345 1.6E-91 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller AL538_26605 8a7c76db5057a7521430e2034c6f0ca1 348 Gene3D G3DSA:2.130.10.10 3 348 8.6E-90 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AL538_26605 8a7c76db5057a7521430e2034c6f0ca1 348 SUPERFAMILY SSF51004 93 330 1.16E-28 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AL538_06855 3eca797c97eff20f5d855659d53242c4 68 Gene3D G3DSA:3.30.1910.10 1 63 1.4E-29 T 11-10-2018 AL538_06855 3eca797c97eff20f5d855659d53242c4 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 5.5E-29 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL538_06855 3eca797c97eff20f5d855659d53242c4 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 3.0E-28 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL538_04370 8ac38024d2a66951b7acf15f9e05c722 117 Pfam PF05713 Bacterial mobilisation protein (MobC) 70 93 4.1E-5 T 11-10-2018 IPR008687 Bacterial mobilisation AL538_10325 0662c1d6a7e4ae1a05b03a78aad063a3 241 SUPERFAMILY SSF53271 67 238 1.84E-30 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AL538_10325 0662c1d6a7e4ae1a05b03a78aad063a3 241 Gene3D G3DSA:3.40.50.2020 105 238 1.4E-14 T 11-10-2018 AL538_10325 0662c1d6a7e4ae1a05b03a78aad063a3 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 1.0E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AL538_16285 0a375a46f5a34a7c834be8d64d8ce2b0 412 Gene3D G3DSA:3.40.50.1970 1 180 2.7E-48 T 11-10-2018 AL538_16285 0a375a46f5a34a7c834be8d64d8ce2b0 412 Gene3D G3DSA:1.20.1090.10 187 382 1.1E-39 T 11-10-2018 AL538_16285 0a375a46f5a34a7c834be8d64d8ce2b0 412 SUPERFAMILY SSF56796 1 380 3.93E-88 T 11-10-2018 AL538_16285 0a375a46f5a34a7c834be8d64d8ce2b0 412 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 3.4E-90 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AL538_17915 d2ec2065e1b4cd41e6addb49fcd17749 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 5.1E-96 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_17915 d2ec2065e1b4cd41e6addb49fcd17749 378 PIRSF PIRSF000267 2 377 5.2E-111 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_17915 d2ec2065e1b4cd41e6addb49fcd17749 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 3.8E-147 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AL538_24890 9395113e483ce59c42b98bdb88b1d3df 503 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 62 497 7.0E-128 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_24890 9395113e483ce59c42b98bdb88b1d3df 503 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 67 497 3.3E-153 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_16785 4518e02cb7ea5e879cceda57e9ee2127 315 PIRSF PIRSF026649 4 305 7.1E-90 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_16785 4518e02cb7ea5e879cceda57e9ee2127 315 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 4.5E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_16785 4518e02cb7ea5e879cceda57e9ee2127 315 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 46.483 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_16785 4518e02cb7ea5e879cceda57e9ee2127 315 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 8.4E-138 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 AL538_08245 09039d32ba0d36c41e22a3c510072e31 318 SUPERFAMILY SSF64182 5 317 1.44E-45 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AL538_01860 36796f4c72abfc461aa3317d66c9ca14 339 Pfam PF13515 Fusaric acid resistance protein-like 194 324 8.8E-6 T 11-10-2018 AL538_25150 52d7cb52595fc4a2d5030b14614b96c0 186 SUPERFAMILY SSF109604 6 131 4.49E-9 T 11-10-2018 AL538_25150 52d7cb52595fc4a2d5030b14614b96c0 186 Gene3D G3DSA:1.10.3210.10 11 158 3.2E-5 T 11-10-2018 AL538_04755 df80c1756c865c384b3cac7067788ff0 126 SUPERFAMILY SSF55298 1 125 1.3E-41 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_04755 df80c1756c865c384b3cac7067788ff0 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 8.7E-46 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 AL538_04755 df80c1756c865c384b3cac7067788ff0 126 Gene3D G3DSA:3.30.1330.40 1 126 3.2E-48 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_04755 df80c1756c865c384b3cac7067788ff0 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.0E-36 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_27090 fc9c54ceab3c03ee71b5851fabf11148 382 SUPERFAMILY SSF56935 33 374 9.16E-22 T 11-10-2018 AL538_27090 fc9c54ceab3c03ee71b5851fabf11148 382 Gene3D G3DSA:2.40.160.10 29 299 1.2E-8 T 11-10-2018 IPR023614 Porin domain superfamily AL538_18165 b5874f65fa0ffe8e02561e4ac8df6387 310 Pfam PF00268 Ribonucleotide reductase, small chain 7 273 2.8E-102 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AL538_18165 b5874f65fa0ffe8e02561e4ac8df6387 310 SUPERFAMILY SSF47240 6 297 1.01E-96 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_18165 b5874f65fa0ffe8e02561e4ac8df6387 310 Gene3D G3DSA:1.10.620.20 2 298 4.6E-114 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AL538_08610 fb27fe130aa66a6f9dfe6433f97e8211 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.1E-76 T 11-10-2018 IPR007338 Protein of unknown function DUF416 AL538_08610 fb27fe130aa66a6f9dfe6433f97e8211 195 Gene3D G3DSA:1.20.1590.10 2 195 1.4E-66 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily AL538_16485 921ab86374c86f171b656d86ee504cc5 157 Gene3D G3DSA:3.40.50.2300 1 135 1.3E-20 T 11-10-2018 AL538_16485 921ab86374c86f171b656d86ee504cc5 157 SUPERFAMILY SSF52172 1 132 2.7E-21 T 11-10-2018 IPR011006 CheY-like superfamily AL538_16485 921ab86374c86f171b656d86ee504cc5 157 Pfam PF00072 Response regulator receiver domain 7 125 2.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_16485 921ab86374c86f171b656d86ee504cc5 157 SMART SM00448 4 125 6.4E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AL538_18865 0cd4d481f4e439707434f193f9f0ee71 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 138 7.3E-29 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 Gene3D G3DSA:3.40.570.10 20 245 1.0E-74 T 11-10-2018 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 SUPERFAMILY SSF54060 23 240 5.59E-71 T 11-10-2018 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 9.4E-58 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 SMART SM00892 40 232 2.5E-64 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AL538_12935 e13bc69797e52e880c80b841e36f5335 250 SMART SM00477 41 232 3.1E-64 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AL538_05950 b198164dccd594e3e490c3c19deae35e 181 Pfam PF07811 TadE-like protein 11 52 5.0E-9 T 11-10-2018 IPR012495 TadE-like AL538_03400 bfda21a25830f134d6cada2f458102a3 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 6.8E-119 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 SUPERFAMILY SSF118215 15 403 7.45E-110 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 Gene3D G3DSA:1.10.3860.10 2 418 4.9E-117 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 8.2E-53 T 11-10-2018 AL538_03400 bfda21a25830f134d6cada2f458102a3 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 8.2E-53 T 11-10-2018 AL538_10190 a71869b0c55aa7b368e75f47415cc8e3 193 Pfam PF13511 Domain of unknown function (DUF4124) 16 61 5.4E-11 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 AL538_00600 f063c1a1e3e68dd29b3964078ac47a39 272 Pfam PF12849 PBP superfamily domain 31 247 6.3E-31 T 11-10-2018 IPR024370 PBP domain AL538_00600 f063c1a1e3e68dd29b3964078ac47a39 272 Gene3D G3DSA:3.40.190.10 106 218 4.8E-98 T 11-10-2018 AL538_00600 f063c1a1e3e68dd29b3964078ac47a39 272 SUPERFAMILY SSF53850 29 257 1.39E-32 T 11-10-2018 AL538_00600 f063c1a1e3e68dd29b3964078ac47a39 272 Gene3D G3DSA:3.40.190.10 31 255 4.8E-98 T 11-10-2018 AL538_06025 738a7dcb498b8e9c924dadb82351f4ed 69 Pfam PF06568 Domain of unknown function (DUF1127) 23 57 6.1E-11 T 11-10-2018 IPR009506 Protein of unknown function DUF1127 AL538_25470 3cf7e1ea7bd53424970a8d97b100aa62 486 Gene3D G3DSA:3.40.605.10 19 476 6.3E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AL538_25470 3cf7e1ea7bd53424970a8d97b100aa62 486 Pfam PF00171 Aldehyde dehydrogenase family 24 480 1.9E-147 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AL538_25470 3cf7e1ea7bd53424970a8d97b100aa62 486 Gene3D G3DSA:3.40.309.10 260 452 6.3E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AL538_25470 3cf7e1ea7bd53424970a8d97b100aa62 486 SUPERFAMILY SSF53720 6 484 1.44E-147 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AL538_04200 845bbe03b43c362e2f63bec1f41c6d1d 441 Pfam PF03553 Na+/H+ antiporter family 150 435 1.2E-75 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AL538_04200 845bbe03b43c362e2f63bec1f41c6d1d 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 11-10-2018 AL538_04200 845bbe03b43c362e2f63bec1f41c6d1d 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 11-10-2018 AL538_04200 845bbe03b43c362e2f63bec1f41c6d1d 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.8E-35 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AL538_03405 8de11740dcbdea9cf2127e44945be1ae 399 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 184 397 8.0E-101 T 11-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL538_03405 8de11740dcbdea9cf2127e44945be1ae 399 Pfam PF17327 Acyl homoserine lactone synthase 18 391 9.7E-157 T 11-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL538_03405 8de11740dcbdea9cf2127e44945be1ae 399 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 159 5.0E-49 T 11-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AL538_00650 e248d6614dbb88f8c7a56ab0351d9254 210 Gene3D G3DSA:1.10.3480.10 3 197 1.6E-41 T 11-10-2018 AL538_00650 e248d6614dbb88f8c7a56ab0351d9254 210 Pfam PF02613 Nitrate reductase delta subunit 45 159 4.5E-30 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AL538_00650 e248d6614dbb88f8c7a56ab0351d9254 210 SUPERFAMILY SSF89155 7 191 1.01E-53 T 11-10-2018 IPR036411 TorD-like superfamily AL538_04735 3d60ef3f81243887baf1ca2d4f692307 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL538_04735 3d60ef3f81243887baf1ca2d4f692307 145 PIRSF PIRSF006173 1 144 2.0E-65 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL538_04735 3d60ef3f81243887baf1ca2d4f692307 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.293 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AL538_19485 c105e94f24ea0b4b82d4ff0172a8c95c 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 1.1E-120 T 11-10-2018 IPR005646 Flagellar assembly protein A AL538_07385 60b84fbc99e757eedf28327a5d71dd98 287 Gene3D G3DSA:3.40.50.300 31 159 1.4E-5 T 11-10-2018 AL538_07385 60b84fbc99e757eedf28327a5d71dd98 287 SUPERFAMILY SSF52540 1 155 4.83E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_07385 60b84fbc99e757eedf28327a5d71dd98 287 Pfam PF03668 P-loop ATPase protein family 1 284 1.9E-109 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL538_07385 60b84fbc99e757eedf28327a5d71dd98 287 PIRSF PIRSF005052 1 286 2.5E-104 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL538_07385 60b84fbc99e757eedf28327a5d71dd98 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.366 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AL538_08350 926e53ff8f64bcd14473bed82d03c583 459 PIRSF PIRSF006603 6 456 3.7E-133 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_08350 926e53ff8f64bcd14473bed82d03c583 459 Pfam PF01554 MatE 255 416 2.7E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_08350 926e53ff8f64bcd14473bed82d03c583 459 Pfam PF01554 MatE 32 191 5.8E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_08350 926e53ff8f64bcd14473bed82d03c583 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 420 1.8E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_19975 219d180301d23022a2cf19d3887427b3 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 8.0E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_19975 219d180301d23022a2cf19d3887427b3 139 Gene3D G3DSA:3.10.180.10 5 129 7.5E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_19975 219d180301d23022a2cf19d3887427b3 139 SUPERFAMILY SSF54593 3 130 8.46E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_10675 ad7e304922b21f7eecf46fa5effdf70c 328 Pfam PF13807 G-rich domain on putative tyrosine kinase 252 315 1.1E-8 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AL538_10675 ad7e304922b21f7eecf46fa5effdf70c 328 Pfam PF02706 Chain length determinant protein 23 125 1.2E-19 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AL538_25405 438fd2fd5de4ee0ec981210717b54277 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AL538_25405 438fd2fd5de4ee0ec981210717b54277 190 Pfam PF00775 Dioxygenase 32 156 3.3E-21 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AL538_25405 438fd2fd5de4ee0ec981210717b54277 190 Gene3D G3DSA:2.60.130.10 4 190 1.7E-44 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AL538_25405 438fd2fd5de4ee0ec981210717b54277 190 SUPERFAMILY SSF49482 19 189 5.36E-47 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AL538_22255 842b7c3bdcaa0e4ce3779460be8aad1d 90 Pfam PF07383 Protein of unknown function (DUF1496) 35 84 7.9E-22 T 11-10-2018 IPR009971 Protein of unknown function DUF1496 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 Gene3D G3DSA:3.90.25.10 194 329 1.1E-143 T 11-10-2018 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 8.7E-6 T 11-10-2018 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 8.7E-6 T 11-10-2018 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 8.7E-6 T 11-10-2018 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 Gene3D G3DSA:3.40.50.720 3 274 1.1E-143 T 11-10-2018 AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 5.0E-58 T 11-10-2018 IPR016040 NAD(P)-binding domain AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 SUPERFAMILY SSF51735 2 336 2.09E-97 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_05895 12a0329c28bcb5e80e2e934c400dc3a1 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 6.5E-140 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AL538_01550 998bef4295e7fe630c2a163280dd7805 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 8.9E-178 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_01550 998bef4295e7fe630c2a163280dd7805 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 430 5.7E-157 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_01550 998bef4295e7fe630c2a163280dd7805 433 PIRSF PIRSF015658 1 432 2.8E-173 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 AL538_04540 6c97e8a3b0375845b619d5c40c1b156e 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 1.0E-62 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) AL538_16255 22af180ad806b76b4744ca9a14863fda 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 6.1E-191 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL538_16255 22af180ad806b76b4744ca9a14863fda 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.561 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL538_16255 22af180ad806b76b4744ca9a14863fda 391 Pfam PF06965 Na+/H+ antiporter 1 7 373 7.3E-144 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AL538_16255 22af180ad806b76b4744ca9a14863fda 391 Gene3D G3DSA:1.20.1530.10 3 381 1.3E-146 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily AL538_10050 1f0abfac71538d6aa03aabc8ad82d44c 141 SUPERFAMILY SSF52402 3 139 4.6E-32 T 11-10-2018 AL538_10050 1f0abfac71538d6aa03aabc8ad82d44c 141 Gene3D G3DSA:3.40.50.620 2 141 1.3E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_10050 1f0abfac71538d6aa03aabc8ad82d44c 141 Pfam PF00582 Universal stress protein family 3 138 1.5E-20 T 11-10-2018 IPR006016 UspA AL538_10050 1f0abfac71538d6aa03aabc8ad82d44c 141 PIRSF PIRSF006276 1 141 3.9E-52 T 11-10-2018 IPR006015 Universal stress protein A AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 2.5E-118 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 47.018 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 Gene3D G3DSA:3.60.21.10 2 267 1.7E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 PIRSF PIRSF000903 1 268 9.2E-120 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 SUPERFAMILY SSF56300 4 252 2.13E-54 T 11-10-2018 AL538_11185 5d49e66970e0006358f4a5397a5810c6 268 Pfam PF00149 Calcineurin-like phosphoesterase 5 129 1.8E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AL538_03660 9a350ba5b209c4be7a1ad2cb43e316e0 703 Gene3D G3DSA:3.40.30.10 584 697 3.3E-9 T 11-10-2018 AL538_03660 9a350ba5b209c4be7a1ad2cb43e316e0 703 SUPERFAMILY SSF52833 579 677 9.51E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_03660 9a350ba5b209c4be7a1ad2cb43e316e0 703 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 308 511 1.2E-15 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AL538_03660 9a350ba5b209c4be7a1ad2cb43e316e0 703 Pfam PF13899 Thioredoxin-like 587 673 3.2E-11 T 11-10-2018 AL538_03660 9a350ba5b209c4be7a1ad2cb43e316e0 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 162 3.4E-16 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL538_07360 f9885c95ce49eca764bef74adc376981 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.603 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL538_07360 f9885c95ce49eca764bef74adc376981 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AL538_07360 f9885c95ce49eca764bef74adc376981 164 Gene3D G3DSA:2.60.450.10 20 157 1.0E-41 T 11-10-2018 AL538_07360 f9885c95ce49eca764bef74adc376981 164 Pfam PF03968 OstA-like protein 30 141 6.9E-30 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AL538_23095 9d0cdf414a7739e0de046d66547d2266 505 SUPERFAMILY SSF53649 31 482 8.43E-127 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_23095 9d0cdf414a7739e0de046d66547d2266 505 Pfam PF00884 Sulfatase 34 359 3.5E-67 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_23095 9d0cdf414a7739e0de046d66547d2266 505 Gene3D G3DSA:3.40.720.10 31 430 5.0E-99 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_05230 5c7a3a62535f96b9cc5cd772958bead6 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 177 1.4E-36 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AL538_05230 5c7a3a62535f96b9cc5cd772958bead6 232 SUPERFAMILY SSF55166 19 175 9.16E-21 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_05230 5c7a3a62535f96b9cc5cd772958bead6 232 Gene3D G3DSA:3.30.1380.10 4 185 1.6E-33 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AL538_01900 425118135bf70b2d60d9256f1f80a75c 138 Gene3D G3DSA:1.20.1270.180 17 128 9.0E-13 T 11-10-2018 AL538_01900 425118135bf70b2d60d9256f1f80a75c 138 Pfam PF07007 Lysozyme inhibitor LprI 25 116 9.7E-15 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AL538_16990 6f5a626bb4d62dbf75a1a44bdd9b0fec 489 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 154 1.4E-21 T 11-10-2018 IPR010657 ImpA, N-terminal AL538_18945 33e230b1f131e6fa9cd15cd155b01a06 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 1.3E-90 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AL538_15370 58ff53f9bff1ddf3ae2b4119cf6e2d37 289 Pfam PF03824 High-affinity nickel-transport protein 64 156 1.2E-7 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AL538_15370 58ff53f9bff1ddf3ae2b4119cf6e2d37 289 Pfam PF03824 High-affinity nickel-transport protein 182 253 1.8E-6 T 11-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 AL538_18980 7c53d9235afdef4c5c1636f79d8b592c 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 3.8E-38 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 AL538_25080 9398077bed07b9c65b5e6d42a92592ec 90 Gene3D G3DSA:2.30.30.350 1 90 2.8E-31 T 11-10-2018 AL538_25080 9398077bed07b9c65b5e6d42a92592ec 90 Pfam PF12208 Domain of unknown function (DUF3601) 12 87 1.2E-13 T 11-10-2018 IPR022020 Domain of unknown function DUF3601 AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 SUPERFAMILY SSF54862 143 504 7.62E-41 T 11-10-2018 AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 Gene3D G3DSA:3.30.70.20 174 254 2.2E-12 T 11-10-2018 AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 11-10-2018 AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL538_00645 583ac2de9a9b75981ec8f3d7cb38560b 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL538_27790 d8a36d04ca73cfa4e8dfb925f554033c 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.7E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_00985 48e7335640d5820838d2bb9594e68bbc 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 430 1.7E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00985 48e7335640d5820838d2bb9594e68bbc 467 SUPERFAMILY SSF58104 157 466 1.16E-66 T 11-10-2018 AL538_00985 48e7335640d5820838d2bb9594e68bbc 467 SMART SM00283 205 466 4.4E-56 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AL538_00985 48e7335640d5820838d2bb9594e68bbc 467 Gene3D G3DSA:1.10.287.950 139 466 1.6E-63 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 168 187 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 409 427 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 491 508 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 300 319 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 75 100 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 150 168 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 431 449 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 270 286 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 467 482 2.5E-65 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 Gene3D G3DSA:1.10.246.130 286 408 1.2E-39 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 Pfam PF01019 Gamma-glutamyltranspeptidase 68 583 2.4E-163 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 Gene3D G3DSA:3.60.20.40 409 588 4.0E-59 T 11-10-2018 AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 SUPERFAMILY SSF56235 45 587 1.18E-176 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_09265 a833d79e1f45b51117e3e55730fe421f 588 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 54 580 1.1E-139 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AL538_21105 50b947dc8a3ee65a8385c3ff4d5a1e59 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 4.9E-21 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 AL538_21105 50b947dc8a3ee65a8385c3ff4d5a1e59 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 2.4E-18 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 AL538_20445 e40972f4631521e65a4f4a47b1fec46d 238 Gene3D G3DSA:3.20.20.190 1 237 1.1E-66 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_20445 e40972f4631521e65a4f4a47b1fec46d 238 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 3.0E-38 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AL538_20445 e40972f4631521e65a4f4a47b1fec46d 238 SUPERFAMILY SSF51695 3 235 1.95E-65 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AL538_16655 1a8d715c80e802232ac3b7fea82cdb44 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 4.7E-54 T 11-10-2018 IPR021212 Domain of unknown function DUF2760 AL538_14865 dd18e0842f2653bc9d781d9785116a41 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 319 6.6E-174 T 11-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein AL538_14865 dd18e0842f2653bc9d781d9785116a41 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 295 1.4E-114 T 11-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AL538_14865 dd18e0842f2653bc9d781d9785116a41 322 SUPERFAMILY SSF56059 36 277 1.4E-19 T 11-10-2018 AL538_09965 d78a13aaad89ab5be38be7e975607d00 109 SUPERFAMILY SSF103481 12 107 8.11E-16 T 11-10-2018 AL538_09965 d78a13aaad89ab5be38be7e975607d00 109 Pfam PF00893 Small Multidrug Resistance protein 9 99 1.0E-19 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AL538_09965 d78a13aaad89ab5be38be7e975607d00 109 Gene3D G3DSA:1.10.3730.20 7 109 7.9E-22 T 11-10-2018 AL538_21590 6206e7fb31553068ff15f949503e4807 154 PIRSF PIRSF012335 1 154 8.5E-66 T 11-10-2018 IPR016596 Protein of unknown function UCP012335 AL538_21590 6206e7fb31553068ff15f949503e4807 154 Pfam PF11008 Protein of unknown function (DUF2846) 15 126 4.5E-29 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 AL538_11310 645e43393a55bd84793126c777722d49 147 Pfam PF11777 Protein of unknown function (DUF3316) 27 140 4.5E-20 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL538_11310 645e43393a55bd84793126c777722d49 147 PIRSF PIRSF028299 25 147 5.6E-33 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL538_25505 44da0062ae771785ee3754ff9d6872d4 118 Pfam PF11225 Protein of unknown function (DUF3024) 59 117 3.7E-18 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 AL538_15295 d20d5fbf1b3382fe34180a43b7a24cef 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 6.7E-50 T 11-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AL538_18100 7b892334a314d765a845ac70769da20a 150 Pfam PF13279 Thioesterase-like superfamily 16 134 1.9E-20 T 11-10-2018 AL538_18100 7b892334a314d765a845ac70769da20a 150 SUPERFAMILY SSF54637 5 138 2.8E-33 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_18100 7b892334a314d765a845ac70769da20a 150 Gene3D G3DSA:3.10.129.10 2 138 1.4E-37 T 11-10-2018 AL538_15870 651ffb4230ef2f82eab47b85741ef264 212 Gene3D G3DSA:3.40.50.620 15 152 1.6E-29 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL538_15870 651ffb4230ef2f82eab47b85741ef264 212 Pfam PF02698 DUF218 domain 33 148 9.5E-21 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 SUPERFAMILY SSF48452 40 201 1.86E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 Pfam PF13431 Tetratricopeptide repeat 96 127 1.1E-6 T 11-10-2018 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 1.3E-80 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 Pfam PF14559 Tetratricopeptide repeat 154 198 1.0E-5 T 11-10-2018 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 Gene3D G3DSA:1.25.40.10 38 242 1.4E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 SMART SM00028 144 177 0.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 SMART SM00028 40 73 75.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 SMART SM00028 74 107 5.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_16745 fd74fc9ab20bc3ee773118abf76db27a 242 SMART SM00028 108 141 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_10575 29237ee5cd5cb642ae7ed232e29fa4f8 134 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_10575 29237ee5cd5cb642ae7ed232e29fa4f8 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 29 129 1.5E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_10575 29237ee5cd5cb642ae7ed232e29fa4f8 134 Gene3D G3DSA:1.10.3830.10 15 134 2.1E-39 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AL538_28340 0fe19e0920d970461d4e5ac4196648c1 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.5E-16 T 11-10-2018 IPR021494 Protein of unknown function DUF3149 AL538_14930 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AL538_14930 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 11-10-2018 IPR012994 Membrane bound YbgT-like AL538_05715 34929521c47e64b9b3f61b1f2cce29ac 198 SUPERFAMILY SSF88697 3 189 4.47E-46 T 11-10-2018 IPR015947 PUA-like superfamily AL538_05715 34929521c47e64b9b3f61b1f2cce29ac 198 Gene3D G3DSA:2.30.130.40 1 111 1.1E-30 T 11-10-2018 AL538_05715 34929521c47e64b9b3f61b1f2cce29ac 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 111 1.1E-14 T 11-10-2018 IPR003111 Lon, substrate-binding domain AL538_19500 acc4de37ccf299d39d0f31b289466665 179 Pfam PF13505 Outer membrane protein beta-barrel domain 19 179 4.9E-8 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_19500 acc4de37ccf299d39d0f31b289466665 179 SUPERFAMILY SSF56925 34 179 2.2E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_19500 acc4de37ccf299d39d0f31b289466665 179 Gene3D G3DSA:2.40.160.10 7 179 6.2E-6 T 11-10-2018 IPR023614 Porin domain superfamily AL538_23415 231753279df8331bb206c2ee1cf87ecb 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.0E-137 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_23415 231753279df8331bb206c2ee1cf87ecb 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 5.6E-153 T 11-10-2018 IPR010263 Type VI secretion protein, VC_A0114 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 SUPERFAMILY SSF53850 90 288 1.66E-42 T 11-10-2018 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 Gene3D G3DSA:3.40.190.290 90 289 1.1E-47 T 11-10-2018 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 SUPERFAMILY SSF46785 2 109 3.41E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 Gene3D G3DSA:1.10.10.10 1 83 3.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_01865 81c41f8ee48a6cd06162ee297c9c7959 289 Pfam PF03466 LysR substrate binding domain 89 287 1.2E-44 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_07950 5ca8aa19f6c0f0dda0eb0f68ba85d248 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 5.0E-32 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AL538_07950 5ca8aa19f6c0f0dda0eb0f68ba85d248 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 53 5.1E-21 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 SMART SM00382 33 220 3.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 PIRSF PIRSF039085 5 248 5.5E-111 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 Pfam PF00005 ABC transporter 24 172 8.3E-39 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 Gene3D G3DSA:3.40.50.300 6 249 5.0E-80 T 11-10-2018 AL538_00965 cc0b8703de29d17f9b4846c4a453f147 249 SUPERFAMILY SSF52540 8 242 2.54E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 1.5E-35 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 Gene3D G3DSA:3.40.50.2300 1 146 8.2E-48 T 11-10-2018 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 SUPERFAMILY SSF52788 1 146 3.66E-38 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 4.2E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 4.2E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 4.2E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 4.2E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 4.2E-23 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AL538_18220 dd8b53046dfc4c6e230f924e7f21f177 146 SMART SM00226 3 145 2.4E-50 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AL538_20650 927a81dbfffd0e9c8413cb2481919333 436 Pfam PF05525 Branched-chain amino acid transport protein 5 423 9.2E-114 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL538_20650 927a81dbfffd0e9c8413cb2481919333 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 7.4E-104 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AL538_13330 bec1b880829e2f59528f0540e12a5be9 291 Pfam PF01963 TraB family 26 279 6.7E-54 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AL538_15900 e9f517e37efff38c4a0024a1959ce938 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 5.9E-71 T 11-10-2018 IPR005226 UPF0014 family AL538_26200 588f056fcd908e199166a7c2828d46a9 201 SUPERFAMILY SSF110111 55 174 2.35E-46 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26200 588f056fcd908e199166a7c2828d46a9 201 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 1.8E-48 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26200 588f056fcd908e199166a7c2828d46a9 201 Gene3D G3DSA:2.60.370.10 54 189 6.5E-43 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26200 588f056fcd908e199166a7c2828d46a9 201 PIRSF PIRSF005413 1 192 4.1E-67 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_18285 026f4cca29891dfdea62332a9376ca87 124 PIRSF PIRSF031804 1 124 2.6E-40 T 11-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 AL538_18285 026f4cca29891dfdea62332a9376ca87 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AL538_10990 93f415a73b1e78c4d0c82aa347fc16ee 190 Gene3D G3DSA:2.60.120.10 3 140 1.2E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AL538_10990 93f415a73b1e78c4d0c82aa347fc16ee 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 4.4E-9 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AL538_10990 93f415a73b1e78c4d0c82aa347fc16ee 190 SUPERFAMILY SSF51206 17 136 3.27E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 Pfam PF00005 ABC transporter 393 515 1.2E-14 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 SUPERFAMILY SSF90123 18 349 3.79E-20 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 SUPERFAMILY SSF52540 369 549 3.0E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 Pfam PF06472 ABC transporter transmembrane region 2 10 302 1.7E-64 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AL538_26740 198e70c9c89c589cefdfa6fc19f1d58c 567 Gene3D G3DSA:3.40.50.300 359 563 7.6E-31 T 11-10-2018 AL538_05800 2dbc8b3892c3a3698f5d4009338c648d 99 Pfam PF07130 YebG protein 1 72 1.5E-31 T 11-10-2018 IPR009813 Uncharacterised protein family YebG AL538_05800 2dbc8b3892c3a3698f5d4009338c648d 99 Gene3D G3DSA:1.10.10.710 21 97 3.9E-7 T 11-10-2018 IPR038627 YebG-like superfamily AL538_02860 434a8101d832c602ee632d6a1a27e3ee 167 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 57 155 7.7E-17 T 11-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AL538_02860 434a8101d832c602ee632d6a1a27e3ee 167 Gene3D G3DSA:3.10.450.530 42 157 1.5E-8 T 11-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily AL538_23590 7bfacffe3d94aebac027b3082391f876 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 231 9.8E-26 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_20505 2046b36c18a992a886e3bd47aa26ccd1 209 Pfam PF16357 Putative PepSY_TM-like 10 209 6.5E-64 T 11-10-2018 IPR032307 Putative PepSY TM-like protein AL538_07485 dbe5389162c227a1a39f7b56369bdea7 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.8E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_07485 dbe5389162c227a1a39f7b56369bdea7 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site AL538_02880 412d27a6fb2d87da595b926c0fa93de2 139 SUPERFAMILY SSF55729 7 136 1.36E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_02880 412d27a6fb2d87da595b926c0fa93de2 139 Gene3D G3DSA:3.40.630.30 1 135 3.3E-25 T 11-10-2018 AL538_02880 412d27a6fb2d87da595b926c0fa93de2 139 Pfam PF00583 Acetyltransferase (GNAT) family 16 112 1.6E-12 T 11-10-2018 IPR000182 GNAT domain AL538_01360 d539b0eb971f44b64b2bec019f478eba 298 SUPERFAMILY SSF51735 4 281 4.69E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_01360 d539b0eb971f44b64b2bec019f478eba 298 Pfam PF05368 NmrA-like family 6 223 4.1E-18 T 11-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AL538_01360 d539b0eb971f44b64b2bec019f478eba 298 Gene3D G3DSA:3.40.50.720 7 274 1.5E-73 T 11-10-2018 AL538_01360 d539b0eb971f44b64b2bec019f478eba 298 Gene3D G3DSA:3.90.25.10 144 275 1.5E-73 T 11-10-2018 AL538_10635 6728f38d40b22d3edb9e08edac1f57df 328 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 6.9E-77 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_10635 6728f38d40b22d3edb9e08edac1f57df 328 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.222 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AL538_10635 6728f38d40b22d3edb9e08edac1f57df 328 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 3.5E-108 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 AL538_10635 6728f38d40b22d3edb9e08edac1f57df 328 PIRSF PIRSF026649 12 313 2.3E-82 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AL538_01120 db196d626568e3879ed1cfbc5bf3c3a5 421 SUPERFAMILY SSF52540 56 357 7.06E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01120 db196d626568e3879ed1cfbc5bf3c3a5 421 Gene3D G3DSA:3.30.450.380 2 166 3.1E-37 T 11-10-2018 AL538_01120 db196d626568e3879ed1cfbc5bf3c3a5 421 Gene3D G3DSA:3.40.50.300 168 408 1.6E-72 T 11-10-2018 AL538_01120 db196d626568e3879ed1cfbc5bf3c3a5 421 Pfam PF00437 Type II/IV secretion system protein 71 347 1.2E-81 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 Pfam PF04551 GcpE protein 14 354 2.2E-132 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF56014 265 354 1.88E-11 T 11-10-2018 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.17 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 SUPERFAMILY SSF51717 15 208 7.85E-11 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.30.413.10 262 361 3.8E-25 T 11-10-2018 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 2.7E-127 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 PIRSF PIRSF004640 1 364 1.0E-147 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AL538_12405 f4f802de6dc6dc1bb522dcde17d13677 372 Gene3D G3DSA:3.20.20.20 1 261 2.7E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AL538_20720 20fba4707f113756713cba10ed5852c5 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 24 196 1.5E-31 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL538_20720 20fba4707f113756713cba10ed5852c5 202 SUPERFAMILY SSF51197 11 198 6.73E-67 T 11-10-2018 AL538_20720 20fba4707f113756713cba10ed5852c5 202 Gene3D G3DSA:2.60.120.590 7 201 6.3E-68 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily AL538_03575 4bfb74b8d6fa0baf8d262285273d503a 149 SUPERFAMILY SSF69635 15 141 1.1E-5 T 11-10-2018 AL538_12540 26aad37fde4185da5fc2aae50baebe57 281 Gene3D G3DSA:3.20.20.70 6 279 2.1E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_12540 26aad37fde4185da5fc2aae50baebe57 281 Pfam PF05853 beta-keto acid cleavage enzyme 12 276 6.4E-58 T 11-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 AL538_21125 265682a6d5bae4c4d5be0640c08f5deb 159 Gene3D G3DSA:2.40.160.20 19 159 3.8E-16 T 11-10-2018 AL538_21125 265682a6d5bae4c4d5be0640c08f5deb 159 SUPERFAMILY SSF56925 19 159 2.88E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_21125 265682a6d5bae4c4d5be0640c08f5deb 159 Pfam PF13505 Outer membrane protein beta-barrel domain 12 132 2.9E-11 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_25145 4566e77d66c2b5dbe34d12e26af21711 141 Gene3D G3DSA:3.10.450.50 1 139 3.1E-20 T 11-10-2018 AL538_25145 4566e77d66c2b5dbe34d12e26af21711 141 SUPERFAMILY SSF54427 1 138 7.53E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_25145 4566e77d66c2b5dbe34d12e26af21711 141 Pfam PF07366 SnoaL-like polyketide cyclase 14 135 4.8E-13 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 AL538_00045 03f4dbbe3998f49948ff9dc29a87ca27 338 Pfam PF11279 Protein of unknown function (DUF3080) 31 334 2.4E-83 T 11-10-2018 IPR021431 Protein of unknown function DUF3080 AL538_24870 c0e8a757468e2581e4b47a257ab20828 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 15 306 8.2E-58 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL538_24870 c0e8a757468e2581e4b47a257ab20828 321 Pfam PF06996 Type VI secretion, TssG 15 306 3.9E-65 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 Gene3D G3DSA:1.25.40.10 34 158 6.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 Gene3D G3DSA:1.25.40.10 161 237 5.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 Pfam PF14559 Tetratricopeptide repeat 173 220 2.0E-8 T 11-10-2018 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 SUPERFAMILY SSF48452 88 219 5.12E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 SMART SM00028 94 127 58.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 SMART SM00028 162 195 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_25985 e7f5f960e914bb91f3a17894c8772ad5 240 SMART SM00028 128 161 27.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 221.414 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 4.3E-212 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 SUPERFAMILY SSF51658 1 384 1.13E-78 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 PIRSF PIRSF016049 1 394 7.0E-176 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 Gene3D G3DSA:3.20.20.150 1 172 7.5E-70 T 11-10-2018 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 Gene3D G3DSA:3.20.20.150 173 395 1.2E-78 T 11-10-2018 AL538_19800 8f0903d1704bb26b2516f4a769079ca6 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 2.8E-155 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 AL538_23195 d09778c84c6df1999a5df6fd96b8aade 111 SUPERFAMILY SSF101756 8 111 9.68E-34 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL538_23195 d09778c84c6df1999a5df6fd96b8aade 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 7.3E-30 T 11-10-2018 IPR005220 Bacterial OB-fold AL538_23195 d09778c84c6df1999a5df6fd96b8aade 111 Gene3D G3DSA:2.40.50.200 12 111 1.5E-35 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily AL538_27895 4fde8d7b64fd53b61e4f1178ff9ea299 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 4.8E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_05920 c9da9082468a76efcf252ecaae1d8386 149 SUPERFAMILY SSF51197 1 142 7.96E-27 T 11-10-2018 AL538_05920 c9da9082468a76efcf252ecaae1d8386 149 Gene3D G3DSA:2.60.120.370 1 142 5.7E-17 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily AL538_05920 c9da9082468a76efcf252ecaae1d8386 149 Pfam PF04074 Domain of unknown function (DUF386) 3 139 1.9E-26 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family AL538_23600 51457a7a5fa593437d79736389106774 128 Pfam PF01124 MAPEG family 3 119 4.0E-25 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL538_23600 51457a7a5fa593437d79736389106774 128 SUPERFAMILY SSF161084 2 124 1.14E-30 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AL538_23600 51457a7a5fa593437d79736389106774 128 Gene3D G3DSA:1.20.120.550 1 125 1.8E-27 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.2E-30 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.2E-30 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 1.2E-30 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 1.2E-30 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 Pfam PF01311 Bacterial export proteins, family 1 12 248 7.8E-57 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AL538_15210 f1e5220a6d834d561466bd01f11b8c15 260 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 245 2.1E-79 T 11-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 AL538_05080 82a959d0726ad07eacc6c2984ecab84a 166 Pfam PF03748 Flagellar basal body-associated protein FliL 65 166 3.7E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL538_12695 e872c5a1c11ecacbd5a420ce0359ea15 118 SUPERFAMILY SSF54285 6 82 1.05E-25 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL538_12695 e872c5a1c11ecacbd5a420ce0359ea15 118 Gene3D G3DSA:3.10.20.280 2 92 5.7E-33 T 11-10-2018 IPR037021 RnfH superfamily AL538_12695 e872c5a1c11ecacbd5a420ce0359ea15 118 Pfam PF03658 RnfH family Ubiquitin 8 90 1.4E-33 T 11-10-2018 IPR005346 RnfH protein AL538_12695 e872c5a1c11ecacbd5a420ce0359ea15 118 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.874 T 11-10-2018 IPR005346 RnfH protein AL538_16730 7c72636c5f7afe5c2be03eac5a70afd4 171 Gene3D G3DSA:2.40.160.20 19 170 1.2E-26 T 11-10-2018 AL538_16730 7c72636c5f7afe5c2be03eac5a70afd4 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 1.6E-19 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_16730 7c72636c5f7afe5c2be03eac5a70afd4 171 SUPERFAMILY SSF56925 17 170 2.38E-28 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_18075 92eaea94a0af62f614a9d76eba9a29cc 381 Pfam PF01594 AI-2E family transporter 23 347 1.1E-33 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 SUPERFAMILY SSF51161 57 183 1.94E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 SMART SM01266 4 56 2.4E-13 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 160 3.4E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 Gene3D G3DSA:2.160.10.10 1 184 2.5E-62 T 11-10-2018 AL538_20770 5f203aa829013ccc5449bcab810d65bc 184 Pfam PF12464 Maltose acetyltransferase 6 55 4.4E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AL538_00105 d85fb8d181f5caf0a54d1770017e2a38 425 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 425 9.8E-62 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_00105 d85fb8d181f5caf0a54d1770017e2a38 425 Gene3D G3DSA:2.40.160.60 25 425 6.1E-79 T 11-10-2018 AL538_00105 d85fb8d181f5caf0a54d1770017e2a38 425 SUPERFAMILY SSF56935 25 425 1.74E-56 T 11-10-2018 AL538_24545 afa16214da006e4e2e9181e4baf01ea0 520 Pfam PF08811 Protein of unknown function (DUF1800) 41 506 1.2E-89 T 11-10-2018 IPR014917 Protein of unknown function DUF1800 AL538_04270 3577d37788474b85610d4afd56769744 338 Gene3D G3DSA:3.40.50.300 121 337 4.3E-62 T 11-10-2018 AL538_04270 3577d37788474b85610d4afd56769744 338 Pfam PF00437 Type II/IV secretion system protein 20 313 6.4E-52 T 11-10-2018 IPR001482 Type II/IV secretion system protein AL538_04270 3577d37788474b85610d4afd56769744 338 SUPERFAMILY SSF52540 10 316 8.04E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_04270 3577d37788474b85610d4afd56769744 338 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 22 323 3.6E-100 T 11-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 AL538_04270 3577d37788474b85610d4afd56769744 338 Gene3D G3DSA:3.30.450.90 13 120 2.2E-30 T 11-10-2018 AL538_26025 8c81490ab958540c0ad0f7767f46abd0 145 Pfam PF01478 Type IV leader peptidase family 8 104 4.9E-10 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL538_07465 bcfb7745f93adc3c4cdae3ad191527e3 296 Gene3D G3DSA:2.40.10.340 122 266 7.1E-37 T 11-10-2018 AL538_07465 bcfb7745f93adc3c4cdae3ad191527e3 296 PIRSF PIRSF038471 2 283 2.8E-82 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL538_07465 bcfb7745f93adc3c4cdae3ad191527e3 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 1.6E-90 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL538_07465 bcfb7745f93adc3c4cdae3ad191527e3 296 Gene3D G3DSA:2.40.10.350 180 257 7.1E-37 T 11-10-2018 AL538_07465 bcfb7745f93adc3c4cdae3ad191527e3 296 Pfam PF04085 rod shape-determining protein MreC 123 269 2.0E-40 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AL538_27320 afe4ef829812867cab10f5e537626610 721 Pfam PF13550 Putative phage tail protein 219 379 1.8E-16 T 11-10-2018 IPR032876 Tip attachment protein J AL538_15185 4411b399b9a6657443d26461a6e831ae 146 Gene3D G3DSA:3.30.1460.10 1 130 7.9E-15 T 11-10-2018 AL538_15185 4411b399b9a6657443d26461a6e831ae 146 Pfam PF05932 Tir chaperone protein (CesT) family 7 123 6.1E-8 T 11-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AL538_15185 4411b399b9a6657443d26461a6e831ae 146 SUPERFAMILY SSF69635 1 136 6.8E-10 T 11-10-2018 AL538_27695 e4af28d969d58d9b3080b3a27beb6648 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.0E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_24110 e9cbc061c17d4c1c2e0761c781033a64 232 Pfam PF06764 Protein of unknown function (DUF1223) 28 214 1.7E-44 T 11-10-2018 IPR010634 Protein of unknown function DUF1223 AL538_24110 e9cbc061c17d4c1c2e0761c781033a64 232 SUPERFAMILY SSF52833 22 227 1.64E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_27945 6b72dee0bac31cd3a36da914188ea513 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.1E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_11925 67818da8aa84c8756a286ccb9e250766 344 SUPERFAMILY SSF51430 1 343 1.13E-107 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL538_11925 67818da8aa84c8756a286ccb9e250766 344 Gene3D G3DSA:3.20.20.100 1 344 4.4E-133 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AL538_11925 67818da8aa84c8756a286ccb9e250766 344 Pfam PF00248 Aldo/keto reductase family 15 335 2.8E-73 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AL538_18310 5afc05c680d7e73f6665cd547bb9d11f 238 Gene3D G3DSA:3.40.30.10 69 238 1.2E-34 T 11-10-2018 AL538_18310 5afc05c680d7e73f6665cd547bb9d11f 238 Pfam PF13462 Thioredoxin 77 234 3.1E-18 T 11-10-2018 IPR012336 Thioredoxin-like fold AL538_18310 5afc05c680d7e73f6665cd547bb9d11f 238 SUPERFAMILY SSF52833 68 233 8.79E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_04120 dddc3781aca266c8b2fb9a46cea12866 114 Pfam PF01627 Hpt domain 26 106 4.0E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AL538_04120 dddc3781aca266c8b2fb9a46cea12866 114 Gene3D G3DSA:1.20.120.160 1 114 1.6E-28 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_04120 dddc3781aca266c8b2fb9a46cea12866 114 SUPERFAMILY SSF47226 2 112 6.41E-25 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 SMART SM00671 29 63 15.0 T 11-10-2018 IPR006597 Sel1-like repeat AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 SMART SM00671 64 99 3.6 T 11-10-2018 IPR006597 Sel1-like repeat AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 SUPERFAMILY SSF81901 30 143 4.45E-12 T 11-10-2018 AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 SUPERFAMILY SSF46565 270 322 1.31E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 Gene3D G3DSA:1.25.40.10 17 191 1.1E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_02200 6298b965473d29b26b58ad745f7aaaea 325 Gene3D G3DSA:1.10.287.110 265 325 6.5E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AL538_26260 337b1934158e365bf3a491cdc94dd23f 290 SUPERFAMILY SSF103481 44 142 2.75E-8 T 11-10-2018 AL538_26260 337b1934158e365bf3a491cdc94dd23f 290 SUPERFAMILY SSF103481 189 286 1.11E-8 T 11-10-2018 AL538_26260 337b1934158e365bf3a491cdc94dd23f 290 Pfam PF00892 EamA-like transporter family 8 142 2.9E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_26260 337b1934158e365bf3a491cdc94dd23f 290 Pfam PF00892 EamA-like transporter family 151 282 9.3E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_20945 892494949d42080595e499cc171b94f2 381 SUPERFAMILY SSF53187 113 379 4.3E-64 T 11-10-2018 AL538_20945 892494949d42080595e499cc171b94f2 381 Gene3D G3DSA:3.40.630.10 120 381 2.5E-71 T 11-10-2018 AL538_20945 892494949d42080595e499cc171b94f2 381 Pfam PF00246 Zinc carboxypeptidase 133 348 5.1E-24 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL538_20945 892494949d42080595e499cc171b94f2 381 SMART SM00631 119 361 2.3E-4 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL538_20945 892494949d42080595e499cc171b94f2 381 Gene3D G3DSA:2.60.40.3120 1 119 1.5E-43 T 11-10-2018 AL538_25100 a4b94bc72ebfaaad42a64ce4c24f370c 381 Pfam PF01594 AI-2E family transporter 21 349 1.4E-21 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AL538_26715 4ea072f3beb674a30a54d97201629842 190 Gene3D G3DSA:3.40.630.30 2 182 2.7E-25 T 11-10-2018 AL538_26715 4ea072f3beb674a30a54d97201629842 190 SUPERFAMILY SSF55729 25 148 1.6E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_26715 4ea072f3beb674a30a54d97201629842 190 Pfam PF00583 Acetyltransferase (GNAT) family 60 142 3.7E-9 T 11-10-2018 IPR000182 GNAT domain AL538_01090 72bf67658094c8d635d3b94a07148424 465 Pfam PF00092 von Willebrand factor type A domain 156 215 2.1E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_01090 72bf67658094c8d635d3b94a07148424 465 SUPERFAMILY SSF53300 153 364 9.25E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_01090 72bf67658094c8d635d3b94a07148424 465 SMART SM00327 154 397 1.9E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A AL538_01090 72bf67658094c8d635d3b94a07148424 465 Gene3D G3DSA:3.40.50.410 148 459 3.0E-20 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_06580 176a1b6b66a0dec6e144f3027661d106 187 SUPERFAMILY SSF53955 7 148 1.13E-21 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AL538_06580 176a1b6b66a0dec6e144f3027661d106 187 Gene3D G3DSA:1.10.530.10 22 182 1.7E-14 T 11-10-2018 AL538_27570 9312678865618eb0b291bea864db6521 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.0E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_02560 7a5d5379738787d14bbeaddd55e8d236 457 Pfam PF14279 HNH endonuclease 4 56 3.9E-12 T 11-10-2018 IPR029471 HNH endonuclease 5 AL538_10060 d14fac2bf83bfab848387515fb9e7cd2 175 Gene3D G3DSA:1.20.1260.10 1 175 2.9E-53 T 11-10-2018 IPR012347 Ferritin-like AL538_10060 d14fac2bf83bfab848387515fb9e7cd2 175 SUPERFAMILY SSF47240 1 160 1.6E-58 T 11-10-2018 IPR009078 Ferritin-like superfamily AL538_10060 d14fac2bf83bfab848387515fb9e7cd2 175 Pfam PF00210 Ferritin-like domain 8 143 4.2E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AL538_22305 db09d3cdf5839255651241e13b96a3e3 310 Gene3D G3DSA:3.40.50.720 1 118 3.9E-27 T 11-10-2018 AL538_22305 db09d3cdf5839255651241e13b96a3e3 310 SUPERFAMILY SSF55347 121 264 1.83E-48 T 11-10-2018 AL538_22305 db09d3cdf5839255651241e13b96a3e3 310 SUPERFAMILY SSF51735 1 165 2.25E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22305 db09d3cdf5839255651241e13b96a3e3 310 Gene3D G3DSA:3.30.360.10 119 309 3.9E-57 T 11-10-2018 AL538_22305 db09d3cdf5839255651241e13b96a3e3 310 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 8.9E-15 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AL538_11050 e73ba9ae04eeea7fdd92d62567feb8f1 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 2.6E-73 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL538_11050 e73ba9ae04eeea7fdd92d62567feb8f1 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 1.1E-82 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL538_05805 08bcf904a5eb1d8a46732b14f3efdb27 230 Pfam PF01592 NifU-like N terminal domain 55 102 5.8E-5 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AL538_05805 08bcf904a5eb1d8a46732b14f3efdb27 230 SUPERFAMILY SSF82649 56 101 4.97E-8 T 11-10-2018 AL538_05805 08bcf904a5eb1d8a46732b14f3efdb27 230 Gene3D G3DSA:3.90.1010.10 31 116 7.0E-7 T 11-10-2018 AL538_24525 942a1930d813a9ceefcce16af56d1113 337 Pfam PF11168 Protein of unknown function (DUF2955) 14 153 2.5E-32 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AL538_23265 416a7db57d4c284244eec778c464a4bc 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 88 186 8.6E-10 T 11-10-2018 AL538_23265 416a7db57d4c284244eec778c464a4bc 205 Gene3D G3DSA:1.10.150.240 19 87 1.8E-36 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AL538_23265 416a7db57d4c284244eec778c464a4bc 205 SUPERFAMILY SSF56784 7 198 1.35E-31 T 11-10-2018 IPR036412 HAD-like superfamily AL538_23265 416a7db57d4c284244eec778c464a4bc 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 186 3.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AL538_23265 416a7db57d4c284244eec778c464a4bc 205 Gene3D G3DSA:3.40.50.1000 6 193 1.8E-36 T 11-10-2018 IPR023214 HAD superfamily AL538_27220 b3b7e45dabb8d86c4d9946cdc15de16c 549 Gene3D G3DSA:3.30.420.240 329 513 2.6E-8 T 11-10-2018 AL538_27220 b3b7e45dabb8d86c4d9946cdc15de16c 549 Gene3D G3DSA:3.40.50.300 38 228 1.6E-29 T 11-10-2018 AL538_27220 b3b7e45dabb8d86c4d9946cdc15de16c 549 PIRSF PIRSF007056 15 549 8.8E-230 T 11-10-2018 IPR012036 Bacteriophage Mu, Gp28 AL538_18695 5e09002443f85dc5e3b66f993a5c0de0 230 Pfam PF12833 Helix-turn-helix domain 140 212 1.0E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_18695 5e09002443f85dc5e3b66f993a5c0de0 230 Gene3D G3DSA:1.10.10.60 111 217 3.6E-20 T 11-10-2018 AL538_18695 5e09002443f85dc5e3b66f993a5c0de0 230 SMART SM00342 131 212 6.7E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AL538_18695 5e09002443f85dc5e3b66f993a5c0de0 230 SUPERFAMILY SSF46689 167 214 3.4E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_15490 b5fd9666e80cd5e6eb4f8384775a8ec6 592 Gene3D G3DSA:1.20.1730.10 21 503 2.6E-87 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_15490 b5fd9666e80cd5e6eb4f8384775a8ec6 592 Pfam PF00474 Sodium:solute symporter family 32 423 7.3E-39 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 SUPERFAMILY SSF48208 311 795 1.59E-18 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 Gene3D G3DSA:3.30.2080.10 338 816 5.4E-217 T 11-10-2018 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 Gene3D G3DSA:2.70.98.10 39 403 5.4E-217 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 14 815 5.2E-165 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 Gene3D G3DSA:1.20.1050.60 404 512 5.4E-217 T 11-10-2018 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 Gene3D G3DSA:1.20.1610.10 513 691 5.4E-217 T 11-10-2018 AL538_17780 1afca5004688fd8d3e4efd76b9bd7c87 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 3.0E-141 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 AL538_16270 2dd27fabdb79085a017d1ff71ddf8a0f 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.3E-30 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_16270 2dd27fabdb79085a017d1ff71ddf8a0f 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 2.6E-111 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_16270 2dd27fabdb79085a017d1ff71ddf8a0f 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.142 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_16270 2dd27fabdb79085a017d1ff71ddf8a0f 400 Gene3D G3DSA:3.40.50.720 1 398 3.5E-179 T 11-10-2018 AL538_16270 2dd27fabdb79085a017d1ff71ddf8a0f 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AL538_13415 8c5d719d3057c26cb73ac70b83936255 104 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 94 2.7E-18 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AL538_13415 8c5d719d3057c26cb73ac70b83936255 104 SUPERFAMILY SSF101498 2 97 4.32E-22 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily AL538_13415 8c5d719d3057c26cb73ac70b83936255 104 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 2.3E-23 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AL538_23850 91ec1f4bdefd609bfc56879ea47070ee 550 Pfam PF01935 Domain of unknown function DUF87 148 379 7.5E-32 T 11-10-2018 IPR002789 Helicase HerA, central domain AL538_23850 91ec1f4bdefd609bfc56879ea47070ee 550 SUPERFAMILY SSF52540 143 513 3.45E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23850 91ec1f4bdefd609bfc56879ea47070ee 550 Gene3D G3DSA:3.40.50.300 318 521 3.9E-44 T 11-10-2018 AL538_23850 91ec1f4bdefd609bfc56879ea47070ee 550 Gene3D G3DSA:3.40.50.300 132 314 9.5E-17 T 11-10-2018 AL538_23850 91ec1f4bdefd609bfc56879ea47070ee 550 Pfam PF05872 Bacterial protein of unknown function (DUF853) 391 471 2.1E-5 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal AL538_19920 9d633a609e6fc1dc593a75ceb87bf9f9 231 PIRSF PIRSF028137 1 231 1.5E-106 T 11-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 86 1.9E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 SUPERFAMILY SSF46785 19 87 2.83E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 Gene3D G3DSA:1.10.10.10 18 87 8.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 5.9E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 5.9E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 Gene3D G3DSA:3.40.640.10 106 471 7.0E-105 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 Pfam PF00155 Aminotransferase class I and II 146 411 4.1E-25 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 SMART SM00345 27 86 1.4E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AL538_22495 6df3ccfd93ab69bb5fa2324f58072a99 477 SUPERFAMILY SSF53383 117 476 1.94E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AL538_27580 05cc50e8390b047fd54012ed89cf0309 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 9.8E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_05450 4c9fec99896a3d51b74b0cb929e04115 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AL538_05450 4c9fec99896a3d51b74b0cb929e04115 280 Pfam PF01148 Cytidylyltransferase family 2 280 4.7E-70 T 11-10-2018 AL538_14280 bd9d62fa3ff7cefcbf4eb6539dd5ddb8 202 Gene3D G3DSA:1.20.1540.10 13 200 4.3E-21 T 11-10-2018 IPR035952 Rhomboid-like superfamily AL538_14280 bd9d62fa3ff7cefcbf4eb6539dd5ddb8 202 SUPERFAMILY SSF144091 22 193 1.09E-27 T 11-10-2018 AL538_14280 bd9d62fa3ff7cefcbf4eb6539dd5ddb8 202 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 43 190 4.3E-48 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria AL538_14280 bd9d62fa3ff7cefcbf4eb6539dd5ddb8 202 Pfam PF01694 Rhomboid family 53 190 5.1E-13 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AL538_26750 94359cfdcaf60eb4b385b1dd807db69e 247 Pfam PF11932 Protein of unknown function (DUF3450) 10 244 5.8E-50 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 SUPERFAMILY SSF53633 5 262 9.12E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 Pfam PF00696 Amino acid kinase family 9 238 3.1E-36 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.4E-63 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.695 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 Gene3D G3DSA:3.40.1160.10 4 260 2.1E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AL538_07825 c5122afdc5ba124f5479c58fe0aeff86 263 PIRSF PIRSF000728 1 263 3.5E-70 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AL538_14415 10fffd31e1518dc39161b4954907e886 191 Gene3D G3DSA:2.40.160.20 15 191 2.5E-9 T 11-10-2018 AL538_14415 10fffd31e1518dc39161b4954907e886 191 SUPERFAMILY SSF56925 32 191 2.09E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_14415 10fffd31e1518dc39161b4954907e886 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 9.8E-22 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_21295 656d53a515e4a947341ad0abbd6c2aca 169 Pfam PF03748 Flagellar basal body-associated protein FliL 70 169 1.4E-14 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AL538_21085 5f7adfe402e00e09f47cf80902a97a0a 346 SUPERFAMILY SSF64518 61 300 6.28E-5 T 11-10-2018 AL538_08665 d7e551332b75798f57bd81bbc4a58d4e 164 Gene3D G3DSA:3.30.70.1730 1 124 1.1E-34 T 11-10-2018 AL538_08665 d7e551332b75798f57bd81bbc4a58d4e 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.936 T 11-10-2018 IPR022973 Ribosomal protein L10 AL538_08665 d7e551332b75798f57bd81bbc4a58d4e 164 SUPERFAMILY SSF160369 4 159 2.62E-44 T 11-10-2018 AL538_08665 d7e551332b75798f57bd81bbc4a58d4e 164 Pfam PF00466 Ribosomal protein L10 5 101 1.2E-26 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AL538_01610 f4a43883753046b38cc0357423409507 110 Pfam PF07119 Protein of unknown function (DUF1375) 16 86 4.0E-10 T 11-10-2018 IPR010780 Protein of unknown function DUF1375 AL538_25990 6161a557652c6482598a76823231d822 280 Pfam PF00482 Type II secretion system (T2SS), protein F 142 269 2.4E-16 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_19835 14a6f1fe94bb86a0e9de24696fc02df3 176 Pfam PF13577 SnoaL-like domain 10 138 1.0E-21 T 11-10-2018 IPR037401 SnoaL-like domain AL538_19835 14a6f1fe94bb86a0e9de24696fc02df3 176 Gene3D G3DSA:3.10.450.50 11 153 1.4E-33 T 11-10-2018 AL538_19835 14a6f1fe94bb86a0e9de24696fc02df3 176 SUPERFAMILY SSF54427 3 175 1.01E-34 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_14625 5d68faa9f9c4fcef9a8d9a82365a14d1 519 Pfam PF04293 SpoVR like protein 26 456 6.0E-177 T 11-10-2018 IPR007390 Sporulation stage V, protein R AL538_01125 962ba39dccb705525df4c3e212aad742 399 Gene3D G3DSA:3.40.50.300 149 384 7.7E-17 T 11-10-2018 AL538_01125 962ba39dccb705525df4c3e212aad742 399 SUPERFAMILY SSF52540 150 333 1.28E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_01125 962ba39dccb705525df4c3e212aad742 399 Pfam PF13614 AAA domain 153 302 1.5E-6 T 11-10-2018 IPR025669 AAA domain AL538_19370 a0957dbdc7b123c68d251254be994c27 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 2.2E-33 T 11-10-2018 IPR021700 Protein of unknown function DUF3283 AL538_01100 9b98b8f6906d8ec96611ee70e5119785 180 Pfam PF07811 TadE-like protein 7 48 3.5E-6 T 11-10-2018 IPR012495 TadE-like AL538_05535 517d416ed562af85deffe394c6e85db0 276 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 53 132 6.4E-15 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_05535 517d416ed562af85deffe394c6e85db0 276 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 192 275 5.8E-17 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AL538_05535 517d416ed562af85deffe394c6e85db0 276 SUPERFAMILY SSF53901 1 275 1.39E-27 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_05535 517d416ed562af85deffe394c6e85db0 276 Gene3D G3DSA:3.40.47.10 1 276 2.0E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AL538_18990 70392f289c3ac808427654e4256ce567 841 Pfam PF02687 FtsX-like permease family 740 830 7.0E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_18765 3956ef74b91c2b7d111436c0044915d3 396 Pfam PF01103 Surface antigen 207 286 7.6E-7 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AL538_18765 3956ef74b91c2b7d111436c0044915d3 396 Gene3D G3DSA:2.40.160.50 190 301 1.6E-8 T 11-10-2018 AL538_00910 2bfda166ec2729a5b7650ae9ed94922a 884 Pfam PF02470 MlaD protein 163 222 7.0E-6 T 11-10-2018 IPR003399 Mce/MlaD AL538_00910 2bfda166ec2729a5b7650ae9ed94922a 884 Pfam PF02470 MlaD protein 282 356 4.0E-6 T 11-10-2018 IPR003399 Mce/MlaD AL538_00910 2bfda166ec2729a5b7650ae9ed94922a 884 Pfam PF02470 MlaD protein 398 464 8.7E-6 T 11-10-2018 IPR003399 Mce/MlaD AL538_00910 2bfda166ec2729a5b7650ae9ed94922a 884 Pfam PF02470 MlaD protein 47 138 6.1E-13 T 11-10-2018 IPR003399 Mce/MlaD AL538_00910 2bfda166ec2729a5b7650ae9ed94922a 884 Pfam PF02470 MlaD protein 753 813 2.8E-7 T 11-10-2018 IPR003399 Mce/MlaD AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.1E-21 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.4E-44 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-44 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-44 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_06200 e4e8b86bf3019453cb0ad754a664c905 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.4E-44 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AL538_21850 2670cbf95d9ae7dd8b081c84bb6e3caf 395 Pfam PF07690 Major Facilitator Superfamily 14 348 3.3E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_21850 2670cbf95d9ae7dd8b081c84bb6e3caf 395 Gene3D G3DSA:1.20.1250.20 4 382 8.3E-45 T 11-10-2018 AL538_21850 2670cbf95d9ae7dd8b081c84bb6e3caf 395 SUPERFAMILY SSF103473 7 383 4.45E-56 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_09515 02f31232dee96301572c1d998f6494df 292 Pfam PF01553 Acyltransferase 72 226 5.3E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_09515 02f31232dee96301572c1d998f6494df 292 SMART SM00563 85 227 1.4E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AL538_09515 02f31232dee96301572c1d998f6494df 292 SUPERFAMILY SSF69593 30 290 1.44E-27 T 11-10-2018 AL538_05065 5c4969fe9e51b704ba90608cdc9faa24 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 9.8E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL538_05065 5c4969fe9e51b704ba90608cdc9faa24 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 8.9E-22 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AL538_00255 a6f5672a6833e23bd1533e94f0332447 229 Pfam PF11726 Inovirus Gp2 40 227 3.3E-44 T 11-10-2018 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 3.4E-81 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 SUPERFAMILY SSF54675 8 148 5.0E-34 T 11-10-2018 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 PIRSF PIRSF000484 1 396 1.3E-66 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 3.2E-154 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 Gene3D G3DSA:3.20.140.10 1 427 2.5E-161 T 11-10-2018 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.782 T 11-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL538_17615 cd928b3cf33c4a7970543baccf235a50 436 SUPERFAMILY SSF51690 129 409 7.46E-88 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AL538_22210 99b2a21455cfd60ca2340eebaff579e4 301 Pfam PF05661 Protein of unknown function (DUF808) 4 290 2.6E-115 T 11-10-2018 IPR008526 Inner membrane protein YedI AL538_22210 99b2a21455cfd60ca2340eebaff579e4 301 PIRSF PIRSF016660 1 301 4.9E-120 T 11-10-2018 IPR008526 Inner membrane protein YedI AL538_00560 580e07c23c48b8a364b98180d0a3dacd 272 Pfam PF04116 Fatty acid hydroxylase superfamily 93 229 1.1E-25 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL538_27890 7eeee1fdba17ff03aaf2264ae8f878db 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.2E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_23380 a655bcab484419d311d11bb7f6f0f35f 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 328 7.9E-97 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL538_23380 a655bcab484419d311d11bb7f6f0f35f 343 Pfam PF06996 Type VI secretion, TssG 21 328 1.1E-84 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL538_17565 05dbcc767e03fabf9adadaeb892b8ddd 270 Pfam PF01048 Phosphorylase superfamily 26 247 2.0E-35 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_17565 05dbcc767e03fabf9adadaeb892b8ddd 270 SUPERFAMILY SSF53167 26 250 1.27E-43 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_17565 05dbcc767e03fabf9adadaeb892b8ddd 270 Gene3D G3DSA:3.40.50.1580 22 270 3.8E-90 T 11-10-2018 AL538_15425 20b1e3f26375bbc53842e98ce75885d7 298 Gene3D G3DSA:3.40.50.1820 18 293 1.2E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_15425 20b1e3f26375bbc53842e98ce75885d7 298 Pfam PF07859 alpha/beta hydrolase fold 62 151 1.3E-16 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AL538_15425 20b1e3f26375bbc53842e98ce75885d7 298 SUPERFAMILY SSF53474 28 293 2.63E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_26345 f724b5c7c9a84ee46fced207f8a4c8c0 244 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 46 212 4.2E-7 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 AL538_26345 f724b5c7c9a84ee46fced207f8a4c8c0 244 SUPERFAMILY SSF52540 21 226 1.38E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_26345 f724b5c7c9a84ee46fced207f8a4c8c0 244 Gene3D G3DSA:3.40.50.300 62 242 4.0E-42 T 11-10-2018 AL538_26345 f724b5c7c9a84ee46fced207f8a4c8c0 244 Gene3D G3DSA:3.40.50.300 19 61 1.2E-5 T 11-10-2018 AL538_12070 8fa1afe962c9ba216b2a561db0b23777 122 SUPERFAMILY SSF141371 1 120 1.02E-29 T 11-10-2018 AL538_12070 8fa1afe962c9ba216b2a561db0b23777 122 Pfam PF07238 PilZ domain 3 100 4.1E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AL538_12070 8fa1afe962c9ba216b2a561db0b23777 122 Gene3D G3DSA:2.40.10.220 1 121 2.9E-28 T 11-10-2018 AL538_12070 8fa1afe962c9ba216b2a561db0b23777 122 PIRSF PIRSF028141 1 120 5.2E-36 T 11-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AL538_00565 aa9285c06085eea619226bfc9b712da4 249 SMART SM01144 27 227 2.7E-60 T 11-10-2018 IPR005636 DTW AL538_00565 aa9285c06085eea619226bfc9b712da4 249 Pfam PF03942 DTW domain 30 221 1.4E-38 T 11-10-2018 IPR005636 DTW AL538_11605 73b061e0e3ce9007b79ac06589925a96 105 Pfam PF04999 Cell division protein FtsL 8 103 9.0E-36 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL538_11605 73b061e0e3ce9007b79ac06589925a96 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 8.8E-25 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL538_11605 73b061e0e3ce9007b79ac06589925a96 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 15.986 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 Gene3D G3DSA:3.40.50.150 1 216 1.5E-63 T 11-10-2018 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 PIRSF PIRSF023956 1 216 6.5E-74 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.801 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.3E-79 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 2.9E-75 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AL538_02005 105debe7edb95dea62a6b81d500a32f6 216 SUPERFAMILY SSF53335 3 214 6.23E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_27230 dcc2440626c1ce2d50240251cbdb3a6f 469 SUPERFAMILY SSF55486 397 463 5.13E-10 T 11-10-2018 AL538_27230 dcc2440626c1ce2d50240251cbdb3a6f 469 Pfam PF04233 Phage Mu protein F like protein 55 169 4.9E-15 T 11-10-2018 IPR006528 Phage head morphogenesis domain AL538_26920 0973c481cd699f0e9c6d19c018aef52c 333 Gene3D G3DSA:3.40.50.300 10 209 1.1E-47 T 11-10-2018 AL538_26920 0973c481cd699f0e9c6d19c018aef52c 333 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 187 5.7E-42 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AL538_26920 0973c481cd699f0e9c6d19c018aef52c 333 SUPERFAMILY SSF52540 13 202 8.47E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05155 7136c9d7c93b42624b5b206d2c0d9f38 142 Gene3D G3DSA:3.30.160.170 40 139 2.7E-13 T 11-10-2018 IPR035924 FlaG-like superfamily AL538_05155 7136c9d7c93b42624b5b206d2c0d9f38 142 Pfam PF03646 FlaG protein 42 140 2.8E-25 T 11-10-2018 IPR005186 FlaG protein AL538_05155 7136c9d7c93b42624b5b206d2c0d9f38 142 SUPERFAMILY SSF160214 60 141 6.41E-23 T 11-10-2018 IPR035924 FlaG-like superfamily AL538_15720 5ff4ba4b13199320f8a669b33863fe65 139 Pfam PF12680 SnoaL-like domain 10 107 1.1E-9 T 11-10-2018 IPR037401 SnoaL-like domain AL538_15720 5ff4ba4b13199320f8a669b33863fe65 139 Gene3D G3DSA:3.10.450.50 4 124 4.4E-18 T 11-10-2018 AL538_15720 5ff4ba4b13199320f8a669b33863fe65 139 SUPERFAMILY SSF54427 5 130 1.05E-19 T 11-10-2018 IPR032710 NTF2-like domain superfamily AL538_03230 f0ea78c6cce2862e2b6043cddff502d6 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.258 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL538_03230 f0ea78c6cce2862e2b6043cddff502d6 235 SUPERFAMILY SSF53335 15 229 2.65E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_03230 f0ea78c6cce2862e2b6043cddff502d6 235 Gene3D G3DSA:3.40.50.150 11 234 4.4E-75 T 11-10-2018 AL538_03230 f0ea78c6cce2862e2b6043cddff502d6 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.5E-86 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AL538_03230 f0ea78c6cce2862e2b6043cddff502d6 235 Pfam PF13489 Methyltransferase domain 52 199 7.7E-25 T 11-10-2018 AL538_05940 7442b87a0b051a5c94617cab42b92251 366 Pfam PF14378 PAP2 superfamily 147 354 2.3E-32 T 11-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AL538_24810 c96ea711c5ff83f70d2d80d73a723c3f 126 SUPERFAMILY SSF54403 42 112 2.43E-14 T 11-10-2018 AL538_24810 c96ea711c5ff83f70d2d80d73a723c3f 126 Pfam PF00031 Cystatin domain 50 110 8.3E-6 T 11-10-2018 IPR000010 Cystatin domain GO:0004869 AL538_24810 c96ea711c5ff83f70d2d80d73a723c3f 126 Gene3D G3DSA:3.10.450.10 35 119 3.6E-8 T 11-10-2018 AL538_22980 9752c169148f2621cefcd4731414fb58 102 Pfam PF14375 Cysteine-rich CWC 53 97 2.5E-7 T 11-10-2018 IPR032720 Cysteine-rich CWC AL538_22980 9752c169148f2621cefcd4731414fb58 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 44 1.9E-14 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 AL538_26415 051b94b5b11430e3ccf4811dce211847 351 PIRSF PIRSF005508 1 351 2.6E-136 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL538_26415 051b94b5b11430e3ccf4811dce211847 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 1.2E-137 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 AL538_26415 051b94b5b11430e3ccf4811dce211847 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 1.2E-61 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AL538_26415 051b94b5b11430e3ccf4811dce211847 351 Gene3D G3DSA:1.20.1530.20 3 342 5.4E-23 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AL538_22205 a66e47bf369d03d9333b34f0061d8f17 305 Gene3D G3DSA:3.40.630.10 4 305 3.9E-117 T 11-10-2018 AL538_22205 a66e47bf369d03d9333b34f0061d8f17 305 Pfam PF00246 Zinc carboxypeptidase 74 146 1.7E-7 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AL538_22205 a66e47bf369d03d9333b34f0061d8f17 305 SUPERFAMILY SSF53187 36 289 6.95E-39 T 11-10-2018 AL538_10095 744bf105ba25ffc7a520d29733acd6b1 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.2E-23 T 11-10-2018 IPR003033 SCP2 sterol-binding domain AL538_10095 744bf105ba25ffc7a520d29733acd6b1 211 SUPERFAMILY SSF55718 13 117 2.17E-10 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL538_10095 744bf105ba25ffc7a520d29733acd6b1 211 Gene3D G3DSA:3.30.1050.10 7 117 5.1E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 Pfam PF03466 LysR substrate binding domain 90 295 2.3E-45 T 11-10-2018 IPR005119 LysR, substrate-binding AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:1.10.10.10 5 92 8.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:3.40.190.10 94 293 5.9E-60 T 11-10-2018 AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 Gene3D G3DSA:3.40.190.10 165 267 5.9E-60 T 11-10-2018 AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 SUPERFAMILY SSF46785 8 90 1.91E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 SUPERFAMILY SSF53850 90 299 1.19E-46 T 11-10-2018 AL538_13900 71b9ad808685c89f599b6c605ddfb1f6 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_26695 04a649c1b5947735ae005144697e545e 171 Gene3D G3DSA:1.10.357.10 2 171 1.1E-28 T 11-10-2018 AL538_26695 04a649c1b5947735ae005144697e545e 171 SUPERFAMILY SSF46689 3 66 4.39E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_26695 04a649c1b5947735ae005144697e545e 171 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 51 1.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AL538_08420 ebd9195abde648cd9f6c059d93b8073b 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.5E-35 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AL538_08420 ebd9195abde648cd9f6c059d93b8073b 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.2E-33 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AL538_26625 bc27f62f961dd32ca565a1878967ccac 506 Pfam PF00474 Sodium:solute symporter family 34 416 1.8E-44 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AL538_26625 bc27f62f961dd32ca565a1878967ccac 506 Gene3D G3DSA:1.20.1730.10 6 485 4.5E-72 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AL538_00060 ec7a76d95ef4dc12dc821404ca09abe6 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.5E-21 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein AL538_00060 ec7a76d95ef4dc12dc821404ca09abe6 64 PIRSF PIRSF037225 1 64 1.2E-23 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 AL538_05000 27a7ce7b7f9f5fdbfe8e05c632d98558 259 Pfam PF13614 AAA domain 4 174 4.8E-50 T 11-10-2018 IPR025669 AAA domain AL538_05000 27a7ce7b7f9f5fdbfe8e05c632d98558 259 Gene3D G3DSA:3.40.50.300 1 254 4.7E-66 T 11-10-2018 AL538_05000 27a7ce7b7f9f5fdbfe8e05c632d98558 259 SUPERFAMILY SSF52540 1 252 6.08E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_24365 901bee662f85a1885ac395145483b0aa 325 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 6 324 3.5E-119 T 11-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain AL538_11080 7b63f37244f4cd37004937275bde562c 119 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 5.0E-18 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 AL538_08905 a0f3725b61db19fdb08f8b8a97976c2d 242 Pfam PF14511 Type II restriction endonuclease EcoO109I 7 201 9.9E-81 T 11-10-2018 IPR032793 Type II restriction endonuclease EcoO109IR AL538_08905 a0f3725b61db19fdb08f8b8a97976c2d 242 SUPERFAMILY SSF52980 7 240 2.41E-83 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AL538_21175 150921640bf20fefec75a8c545ad7640 378 Pfam PF02687 FtsX-like permease family 282 371 1.1E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_21175 150921640bf20fefec75a8c545ad7640 378 Pfam PF12704 MacB-like periplasmic core domain 30 194 1.4E-12 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_27675 fb8f6bab76b7457ac943bd202f14cd24 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.5E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_20690 7371debfe9e02f22e0704dd3330a209a 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 3.7E-47 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 AL538_19840 01565e376acc8084cca329688b8e129b 180 SUPERFAMILY SSF52833 8 175 2.69E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_19840 01565e376acc8084cca329688b8e129b 180 Gene3D G3DSA:3.40.30.10 4 164 8.4E-22 T 11-10-2018 AL538_19840 01565e376acc8084cca329688b8e129b 180 Pfam PF08534 Redoxin 8 148 2.3E-19 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AL538_22520 b386113b5ffe685bbaa119d1e662aa2b 204 Pfam PF01810 LysE type translocator 15 202 2.2E-32 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_22520 b386113b5ffe685bbaa119d1e662aa2b 204 PIRSF PIRSF006324 1 203 5.1E-42 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_18360 850abf78c6d40e9bcd9a48d5a0b60f1e 155 SUPERFAMILY SSF110087 5 145 2.22E-43 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_18360 850abf78c6d40e9bcd9a48d5a0b60f1e 155 Gene3D G3DSA:2.60.40.1890 33 148 1.8E-37 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AL538_18360 850abf78c6d40e9bcd9a48d5a0b60f1e 155 Pfam PF04314 Copper chaperone PCu(A)C 31 135 1.7E-36 T 11-10-2018 IPR007410 Copper chaperone PCuAC AL538_21155 a87df7eea610a829bff959b333d4e07a 650 Pfam PF03239 Iron permease FTR1 family 280 512 2.5E-40 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 AL538_12785 03f4943fe8d6a97feaf398555c774b33 100 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 1.9E-35 T 11-10-2018 IPR022069 Protein of unknown function DUF3622 AL538_13420 a112c8ec3f7bc95a4bc742d83030fd45 248 Gene3D G3DSA:2.30.30.760 188 248 2.7E-12 T 11-10-2018 AL538_13420 a112c8ec3f7bc95a4bc742d83030fd45 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 8.0E-55 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL538_13420 a112c8ec3f7bc95a4bc742d83030fd45 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.0E-41 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL538_13420 a112c8ec3f7bc95a4bc742d83030fd45 248 SMART SM00858 126 188 7.3E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AL538_27730 46d872562458ca80bcac5fd2dbb50298 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 2.2E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_20305 4d58ee6c39b8da20039ab1528238301a 267 Pfam PF08543 Phosphomethylpyrimidine kinase 9 257 1.4E-94 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AL538_20305 4d58ee6c39b8da20039ab1528238301a 267 Gene3D G3DSA:3.40.1190.20 1 266 1.8E-100 T 11-10-2018 IPR029056 Ribokinase-like AL538_20305 4d58ee6c39b8da20039ab1528238301a 267 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 2 259 1.9E-101 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_20305 4d58ee6c39b8da20039ab1528238301a 267 SUPERFAMILY SSF53613 2 260 3.43E-81 T 11-10-2018 IPR029056 Ribokinase-like AL538_22290 cd92f1d332e004a45740687b922ad27e 404 Pfam PF07690 Major Facilitator Superfamily 16 357 6.4E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_22290 cd92f1d332e004a45740687b922ad27e 404 SUPERFAMILY SSF103473 6 393 1.7E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_22290 cd92f1d332e004a45740687b922ad27e 404 Gene3D G3DSA:1.20.1250.20 8 393 2.3E-52 T 11-10-2018 AL538_14060 d2cd19e14635b8167fde35843378b1c0 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 194 5.1E-10 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL538_14060 d2cd19e14635b8167fde35843378b1c0 209 Gene3D G3DSA:2.50.20.10 28 209 2.9E-22 T 11-10-2018 AL538_14060 d2cd19e14635b8167fde35843378b1c0 209 SUPERFAMILY SSF89392 29 195 7.85E-16 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL538_19695 efc1f13af269bcb9ab49a6a4016b02fb 193 SUPERFAMILY SSF52317 5 188 3.11E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_19695 efc1f13af269bcb9ab49a6a4016b02fb 193 Pfam PF01965 DJ-1/PfpI family 5 168 1.7E-28 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AL538_19695 efc1f13af269bcb9ab49a6a4016b02fb 193 Gene3D G3DSA:3.40.50.880 2 187 7.0E-38 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AL538_11250 d40742be02b1de0cba69e1b87a556265 182 Pfam PF01569 PAP2 superfamily 74 176 6.4E-19 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_11250 d40742be02b1de0cba69e1b87a556265 182 SMART SM00014 71 177 3.1E-14 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL538_11250 d40742be02b1de0cba69e1b87a556265 182 SUPERFAMILY SSF48317 14 177 9.03E-38 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AL538_11250 d40742be02b1de0cba69e1b87a556265 182 Gene3D G3DSA:1.20.144.10 96 181 1.4E-17 T 11-10-2018 AL538_03840 3c3fcaff139f8f1d805e44dcb35fc81e 196 Pfam PF13505 Outer membrane protein beta-barrel domain 12 196 1.1E-7 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AL538_03840 3c3fcaff139f8f1d805e44dcb35fc81e 196 Gene3D G3DSA:2.40.160.20 27 165 1.7E-11 T 11-10-2018 AL538_03840 3c3fcaff139f8f1d805e44dcb35fc81e 196 SUPERFAMILY SSF56925 28 196 4.19E-19 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_12690 5d110977e041428ca92201b5ef7fca18 147 Gene3D G3DSA:3.30.530.20 1 143 6.9E-38 T 11-10-2018 IPR023393 START-like domain superfamily AL538_12690 5d110977e041428ca92201b5ef7fca18 147 SUPERFAMILY SSF55961 1 143 2.96E-34 T 11-10-2018 AL538_12690 5d110977e041428ca92201b5ef7fca18 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.7E-30 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AL538_15885 12927efb5c28952bdb132eec727e8ebd 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 4.3E-22 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AL538_15885 12927efb5c28952bdb132eec727e8ebd 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 9.5E-24 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter AL538_16310 ce1df681b702cc4648ce343502a4348c 306 Gene3D G3DSA:1.10.3210.10 19 291 5.9E-40 T 11-10-2018 AL538_16310 ce1df681b702cc4648ce343502a4348c 306 Pfam PF08668 HDOD domain 39 233 9.8E-37 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD AL538_16310 ce1df681b702cc4648ce343502a4348c 306 SUPERFAMILY SSF109604 27 294 1.66E-39 T 11-10-2018 AL538_23710 068291a9d212e497c049038c2cde2990 199 Gene3D G3DSA:1.20.120.80 14 199 4.7E-57 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23710 068291a9d212e497c049038c2cde2990 199 Pfam PF00510 Cytochrome c oxidase subunit III 16 197 7.6E-19 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_23710 068291a9d212e497c049038c2cde2990 199 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 20 199 2.3E-84 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AL538_23710 068291a9d212e497c049038c2cde2990 199 SUPERFAMILY SSF81452 9 197 1.12E-57 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_21070 bef01270a784edf971a68392e75a3ea0 182 Pfam PF10135 Rod binding protein 54 104 2.0E-11 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal AL538_13065 11e9cee16e8f1b919d392bd806ba82e8 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.146 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_13065 11e9cee16e8f1b919d392bd806ba82e8 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_13065 11e9cee16e8f1b919d392bd806ba82e8 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 5.3E-135 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_13065 11e9cee16e8f1b919d392bd806ba82e8 373 Pfam PF01098 Cell cycle protein 23 367 7.1E-113 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AL538_25175 c4c7e744fdfa14627086fffed95c2f97 134 SUPERFAMILY SSF117856 4 131 8.89E-37 T 11-10-2018 AL538_25175 c4c7e744fdfa14627086fffed95c2f97 134 Gene3D G3DSA:3.30.1330.80 2 134 5.5E-47 T 11-10-2018 AL538_25175 c4c7e744fdfa14627086fffed95c2f97 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 3.0E-23 T 11-10-2018 IPR005175 PPC domain AL538_27395 4f6cfc616c5972a4a9c55731758c40db 163 Pfam PF10517 Electron transfer DM13 59 154 1.0E-19 T 11-10-2018 IPR019545 DM13 domain AL538_20670 a92adffa5c4043b0ddb7bdf85b0b514a 408 SUPERFAMILY SSF51905 5 303 8.63E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_20670 a92adffa5c4043b0ddb7bdf85b0b514a 408 Gene3D G3DSA:3.50.50.60 6 393 8.3E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AL538_20670 a92adffa5c4043b0ddb7bdf85b0b514a 408 Gene3D G3DSA:3.30.9.10 89 359 8.3E-82 T 11-10-2018 AL538_20670 a92adffa5c4043b0ddb7bdf85b0b514a 408 Pfam PF01266 FAD dependent oxidoreductase 6 397 2.9E-65 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AL538_27845 1321d1770da150615ddf18b294c0d912 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.0E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_16455 7bde5af4bf0566ccd7cddf7ac05ee054 76 Gene3D G3DSA:1.20.1280.100 1 73 3.7E-41 T 11-10-2018 AL538_16455 7bde5af4bf0566ccd7cddf7ac05ee054 76 Pfam PF09016 Pas factor saposin fold 1 76 3.3E-42 T 11-10-2018 IPR015106 Pas factor saposin domain AL538_10020 10eaff0b9f1c7b8436881cba3db06c95 680 Pfam PF01432 Peptidase family M3 222 677 3.7E-162 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AL538_10020 10eaff0b9f1c7b8436881cba3db06c95 680 Gene3D G3DSA:1.10.1370.10 140 610 3.0E-267 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL538_10020 10eaff0b9f1c7b8436881cba3db06c95 680 Gene3D G3DSA:1.10.1370.40 13 675 3.0E-267 T 11-10-2018 AL538_10020 10eaff0b9f1c7b8436881cba3db06c95 680 SUPERFAMILY SSF55486 1 677 8.06E-211 T 11-10-2018 AL538_20540 d522d1ac14eac9fb7d8864d345fbfdf8 291 SUPERFAMILY SSF81345 15 281 3.27E-34 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_20540 d522d1ac14eac9fb7d8864d345fbfdf8 291 Pfam PF00950 ABC 3 transport family 23 285 3.2E-55 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AL538_20540 d522d1ac14eac9fb7d8864d345fbfdf8 291 Gene3D G3DSA:1.10.3470.10 77 288 2.6E-9 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 5.6E-138 T 11-10-2018 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 Gene3D G3DSA:1.20.1250.20 246 460 4.6E-38 T 11-10-2018 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 Pfam PF07690 Major Facilitator Superfamily 35 396 2.6E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 PIRSF PIRSF002808 8 460 7.4E-108 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 Gene3D G3DSA:1.20.1250.20 28 230 2.8E-33 T 11-10-2018 AL538_24490 2cadaf5c532ba33608dbef89ba38710e 465 SUPERFAMILY SSF103473 17 449 1.09E-58 T 11-10-2018 IPR036259 MFS transporter superfamily AL538_00135 ae62595a8621898305f2d2bfe6032e0d 168 Pfam PF04449 CS1 type fimbrial major subunit 34 161 2.5E-17 T 11-10-2018 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 AL538_00135 ae62595a8621898305f2d2bfe6032e0d 168 Gene3D G3DSA:2.60.40.2040 40 168 4.3E-23 T 11-10-2018 AL538_19035 e8b24c19dca7f2d881827899ef22127c 147 Pfam PF07681 DoxX 17 103 1.6E-23 T 11-10-2018 IPR032808 DoxX family AL538_21440 1a0245f4c7069c032fd4722647a00cbe 129 SUPERFAMILY SSF47175 24 119 7.42E-30 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AL538_21440 1a0245f4c7069c032fd4722647a00cbe 129 Gene3D G3DSA:1.20.120.10 18 126 1.0E-13 T 11-10-2018 AL538_21440 1a0245f4c7069c032fd4722647a00cbe 129 Pfam PF07361 Cytochrome b562 24 119 1.7E-29 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 AL538_19885 1d64e455ff145fcca6691b62b62e3b42 199 Pfam PF01810 LysE type translocator 14 195 3.4E-18 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_18300 dfac46b4d08e71315f4215f5b3307217 246 Pfam PF07670 Nucleoside recognition 86 180 6.9E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_27140 38fb51dc42c9bd7c5e631e6d6f555f4f 208 Pfam PF11363 Protein of unknown function (DUF3164) 12 207 1.1E-61 T 11-10-2018 IPR021505 Bacteriophage B3, Orf6 AL538_04160 6e62e6ea47f02bc7c026e5a2c8457603 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.213 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AL538_04160 6e62e6ea47f02bc7c026e5a2c8457603 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.8E-139 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 AL538_04160 6e62e6ea47f02bc7c026e5a2c8457603 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.3E-105 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AL538_01060 de03c54853076023b3c4a5b2e6f86232 186 Pfam PF03729 Short repeat of unknown function (DUF308) 78 147 4.1E-8 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane AL538_01060 de03c54853076023b3c4a5b2e6f86232 186 Pfam PF03729 Short repeat of unknown function (DUF308) 22 92 6.3E-12 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane AL538_22055 dc2bd18af285836d65af32daf267bfec 343 SUPERFAMILY SSF50129 290 338 8.95E-7 T 11-10-2018 IPR011032 GroES-like superfamily AL538_22055 dc2bd18af285836d65af32daf267bfec 343 Gene3D G3DSA:3.40.50.720 128 309 1.3E-132 T 11-10-2018 AL538_22055 dc2bd18af285836d65af32daf267bfec 343 Gene3D G3DSA:3.90.180.10 18 337 1.3E-132 T 11-10-2018 AL538_22055 dc2bd18af285836d65af32daf267bfec 343 SUPERFAMILY SSF50129 4 144 5.57E-45 T 11-10-2018 IPR011032 GroES-like superfamily AL538_22055 dc2bd18af285836d65af32daf267bfec 343 Pfam PF00107 Zinc-binding dehydrogenase 159 285 1.5E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AL538_22055 dc2bd18af285836d65af32daf267bfec 343 SMART SM00829 17 337 1.2E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AL538_22055 dc2bd18af285836d65af32daf267bfec 343 SUPERFAMILY SSF51735 125 304 6.47E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AL538_22055 dc2bd18af285836d65af32daf267bfec 343 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 5.6E-43 T 11-10-2018 AL538_25975 63b481f36581f454b97f35660422d351 186 Pfam PF16964 Putative tight adherence pilin protein F 12 186 7.4E-29 T 11-10-2018 IPR031582 Putative tight adherence pilin protein F AL538_14815 5a0039469d39bc2e09d3bc3e4e516461 229 Pfam PF09335 SNARE associated Golgi protein 65 181 3.6E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_07810 a289c958511aff78d12746f4bae9e3ca 93 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 6.6E-38 T 11-10-2018 IPR022072 Protein of unknown function DUF3624 AL538_26440 1dfafb3bb3fae190ed8e421cc798ed9b 205 Pfam PF02525 Flavodoxin-like fold 4 173 1.6E-44 T 11-10-2018 IPR003680 Flavodoxin-like fold AL538_26440 1dfafb3bb3fae190ed8e421cc798ed9b 205 SUPERFAMILY SSF52218 4 180 3.09E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_26440 1dfafb3bb3fae190ed8e421cc798ed9b 205 Gene3D G3DSA:3.40.50.360 1 180 4.6E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AL538_26995 375e09d31be99140cf40d814c4df8e47 234 Pfam PF08241 Methyltransferase domain 44 139 2.1E-16 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_26995 375e09d31be99140cf40d814c4df8e47 234 SUPERFAMILY SSF53335 4 209 3.5E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_26995 375e09d31be99140cf40d814c4df8e47 234 Gene3D G3DSA:3.40.50.150 2 213 1.2E-40 T 11-10-2018 AL538_21550 31952915a05309fe92d8ccc4674d6081 389 Pfam PF14284 PcfJ-like protein 234 374 2.6E-11 T 11-10-2018 IPR025586 PcfJ-like protein AL538_28600 af8b651372d6fa7c0df9068bda9cf4f3 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 2.3E-20 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AL538_28600 af8b651372d6fa7c0df9068bda9cf4f3 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AL538_15745 a5b0154b4cd043711af3c4874efc19ff 170 Pfam PF11086 Protein of unknown function (DUF2878) 5 150 2.4E-28 T 11-10-2018 IPR021306 Protein of unknown function DUF2878 AL538_06810 29ea2f93a7998006039593c508649827 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 4.9E-32 T 11-10-2018 AL538_06810 29ea2f93a7998006039593c508649827 156 PIRSF PIRSF004923 1 156 1.4E-38 T 11-10-2018 IPR026268 Protein RseC AL538_17885 5652b6c6724a017b7114d8c91ee1e742 318 Pfam PF12706 Beta-lactamase superfamily domain 63 274 1.2E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase AL538_17885 5652b6c6724a017b7114d8c91ee1e742 318 Gene3D G3DSA:3.60.15.10 34 317 2.8E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_17885 5652b6c6724a017b7114d8c91ee1e742 318 SUPERFAMILY SSF56281 35 306 3.38E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_15360 a19eb62d199e528124039e70f69fbd24 268 Pfam PF08241 Methyltransferase domain 56 148 1.3E-4 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_15360 a19eb62d199e528124039e70f69fbd24 268 Gene3D G3DSA:3.40.50.150 14 217 1.2E-22 T 11-10-2018 AL538_15360 a19eb62d199e528124039e70f69fbd24 268 SUPERFAMILY SSF53335 26 264 2.81E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_16015 5e30f697ee3465e5cd3de5ce90d80dff 186 Pfam PF03352 Methyladenine glycosylase 8 183 4.7E-73 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AL538_16015 5e30f697ee3465e5cd3de5ce90d80dff 186 Gene3D G3DSA:1.10.340.30 3 186 3.6E-76 T 11-10-2018 AL538_16015 5e30f697ee3465e5cd3de5ce90d80dff 186 SUPERFAMILY SSF48150 5 184 2.67E-73 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AL538_21605 c8e3e3c759d405784f31755f1698d2e0 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 124 3.7E-10 T 11-10-2018 IPR024464 Protein of unknown function DUF2391 AL538_04350 c3c3e30ecc68f9106dc027862f3bcc47 225 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 40 221 2.3E-34 T 11-10-2018 IPR018728 Domain of unknown function DUF2268 AL538_17145 eea2d27426afcd962e10620f5a88e023 473 Pfam PF13440 Polysaccharide biosynthesis protein 28 252 1.5E-10 T 11-10-2018 AL538_07250 07585c06d0e6c9e70252863479699339 149 SUPERFAMILY SSF102400 1 145 2.22E-41 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AL538_07250 07585c06d0e6c9e70252863479699339 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 7.0E-33 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AL538_07250 07585c06d0e6c9e70252863479699339 149 Gene3D G3DSA:3.40.50.10110 1 146 5.2E-43 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AL538_18345 7244d3a3dd8da1d82eedb949cd1e9abc 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 6.9E-97 T 11-10-2018 IPR007163 Protein of unknown function DUF368 AL538_05205 fcfbaf8f77794c5be0de4735dfecf6d3 117 Pfam PF11169 Protein of unknown function (DUF2956) 12 114 1.1E-42 T 11-10-2018 IPR021339 Protein of unknown function DUF2956 AL538_23635 62b0c98f7ae0c32afba0688256fe0790 183 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 97 180 4.8E-6 T 11-10-2018 IPR019275 Protein of unknown function DUF2301 AL538_27645 a3fcccc1e6d0a39b6182df372f232844 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.2E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_12655 e8200236582a389ebd760c39afdbc6da 597 Pfam PF03235 Protein of unknown function DUF262 19 237 6.6E-35 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AL538_12655 e8200236582a389ebd760c39afdbc6da 597 Pfam PF07510 Protein of unknown function (DUF1524) 432 585 4.3E-21 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 AL538_26195 6311982f5520e3158978a79dadc44dc5 294 Gene3D G3DSA:1.10.287.70 1 78 1.0E-17 T 11-10-2018 AL538_26195 6311982f5520e3158978a79dadc44dc5 294 Gene3D G3DSA:1.20.120.80 79 294 1.7E-62 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26195 6311982f5520e3158978a79dadc44dc5 294 SUPERFAMILY SSF81452 4 294 5.76E-78 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_26195 6311982f5520e3158978a79dadc44dc5 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 1.4E-48 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AL538_06000 9f969e56c1d4393b1af4c0c0b10a2cdf 441 SUPERFAMILY SSF52540 152 436 3.25E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_20660 fc136ba3d48be79e4a4dfcaab082d71b 336 Gene3D G3DSA:3.40.190.10 32 326 9.8E-90 T 11-10-2018 AL538_20660 fc136ba3d48be79e4a4dfcaab082d71b 336 Pfam PF16868 NMT1-like family 32 326 1.2E-111 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_20660 fc136ba3d48be79e4a4dfcaab082d71b 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 6.4E-108 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AL538_20660 fc136ba3d48be79e4a4dfcaab082d71b 336 SUPERFAMILY SSF53850 29 327 3.26E-64 T 11-10-2018 AL538_20660 fc136ba3d48be79e4a4dfcaab082d71b 336 Gene3D G3DSA:3.40.190.10 120 263 9.8E-90 T 11-10-2018 AL538_27240 d91f4efe029dc390fae26e521b92cd98 157 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 13 150 9.9E-18 T 11-10-2018 IPR006522 Phage virion morphogensis protein AL538_27240 d91f4efe029dc390fae26e521b92cd98 157 Pfam PF05069 Phage virion morphogenesis family 13 150 1.0E-30 T 11-10-2018 IPR006522 Phage virion morphogensis protein AL538_07400 e70f2d34593e700f11ed20d935815102 447 Gene3D G3DSA:3.30.2290.10 7 232 7.6E-84 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AL538_07400 e70f2d34593e700f11ed20d935815102 447 SUPERFAMILY SSF111283 12 447 2.49E-130 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AL538_07400 e70f2d34593e700f11ed20d935815102 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 3.2E-61 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AL538_27480 f83d95019474e1f569b19f5e3c687ef3 51 Pfam PF11665 Protein of unknown function (DUF3265) 24 51 2.7E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_11985 3566338057be4397e764bb18b11f8462 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.833 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 5.2E-135 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 Pfam PF03023 MviN-like protein 30 481 4.2E-143 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PIRSF PIRSF002869 1 517 6.0E-149 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_11985 3566338057be4397e764bb18b11f8462 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AL538_22965 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.992 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL538_22965 0067ec7f258a5cd007a3a8b4fe61dd5b 112 SUPERFAMILY SSF55248 16 109 1.26E-33 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL538_22965 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Gene3D G3DSA:3.30.1360.20 15 112 1.1E-32 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL538_22965 0067ec7f258a5cd007a3a8b4fe61dd5b 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 8.6E-32 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AL538_04930 8c3e58f0b3fdfe8c53940eb1bb3ee549 435 Gene3D G3DSA:2.40.160.60 26 435 7.4E-125 T 11-10-2018 AL538_04930 8c3e58f0b3fdfe8c53940eb1bb3ee549 435 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 435 1.3E-133 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL538_04930 8c3e58f0b3fdfe8c53940eb1bb3ee549 435 SUPERFAMILY SSF56935 26 435 1.37E-102 T 11-10-2018 AL538_23260 8a7f6e941d24b4fed3e044b31a859ebb 182 Pfam PF00583 Acetyltransferase (GNAT) family 50 141 6.8E-15 T 11-10-2018 IPR000182 GNAT domain AL538_23260 8a7f6e941d24b4fed3e044b31a859ebb 182 SUPERFAMILY SSF55729 1 152 7.38E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_23260 8a7f6e941d24b4fed3e044b31a859ebb 182 Gene3D G3DSA:3.40.630.30 2 169 2.7E-31 T 11-10-2018 AL538_00595 ef18cce276f93f69af983b0f378234cf 232 SUPERFAMILY SSF161098 15 222 4.06E-31 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00595 ef18cce276f93f69af983b0f378234cf 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 1.0E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_00595 ef18cce276f93f69af983b0f378234cf 232 Gene3D G3DSA:1.10.3720.10 2 229 8.2E-28 T 11-10-2018 IPR035906 MetI-like superfamily AL538_06815 f02ea6224f120c3b2387ba99249a5804 321 PIRSF PIRSF005427 1 318 1.8E-83 T 11-10-2018 IPR005588 MucB/RseB AL538_06815 f02ea6224f120c3b2387ba99249a5804 321 Gene3D G3DSA:3.30.200.100 218 317 2.2E-28 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily AL538_06815 f02ea6224f120c3b2387ba99249a5804 321 Gene3D G3DSA:2.50.20.10 24 208 3.9E-52 T 11-10-2018 AL538_06815 f02ea6224f120c3b2387ba99249a5804 321 Pfam PF17188 MucB/RseB C-terminal domain 218 311 7.0E-28 T 11-10-2018 IPR033436 MucB/RseB, C-terminal AL538_06815 f02ea6224f120c3b2387ba99249a5804 321 Pfam PF03888 MucB/RseB N-terminal domain 26 193 2.8E-58 T 11-10-2018 IPR033434 MucB/RseB, N-terminal AL538_06425 c311e4e945777044aae153d1196dd471 264 PIRSF PIRSF000388 1 264 1.8E-101 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL538_06425 c311e4e945777044aae153d1196dd471 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.28 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL538_06425 c311e4e945777044aae153d1196dd471 264 SUPERFAMILY SSF51621 3 262 6.67E-106 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AL538_06425 c311e4e945777044aae153d1196dd471 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 2.5E-115 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL538_06425 c311e4e945777044aae153d1196dd471 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.2E-108 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AL538_06425 c311e4e945777044aae153d1196dd471 264 Gene3D G3DSA:3.20.20.60 1 263 1.1E-105 T 11-10-2018 AL538_09075 66cbf42f555eece7da96a060e40cced6 329 Pfam PF12146 Serine aminopeptidase, S33 53 310 8.0E-59 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AL538_09075 66cbf42f555eece7da96a060e40cced6 329 Gene3D G3DSA:3.40.50.1820 29 329 2.0E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_09075 66cbf42f555eece7da96a060e40cced6 329 SUPERFAMILY SSF53474 41 323 2.04E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AL538_20680 fad2fa37abd9284dc12f6079c8accf15 414 PIRSF PIRSF016055 1 412 3.5E-186 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_20680 fad2fa37abd9284dc12f6079c8accf15 414 Pfam PF03116 NQR2, RnfD, RnfE family 44 404 2.0E-105 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 AL538_20680 fad2fa37abd9284dc12f6079c8accf15 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 411 35.525 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_20680 fad2fa37abd9284dc12f6079c8accf15 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 407 1.7E-178 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 AL538_27755 65031d531d7a1c0e080b8ead7dea964e 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 5.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_00270 45e783bfdcdcb98f5e901cb0bba82fd2 145 Gene3D G3DSA:3.10.450.430 2 143 1.2E-28 T 11-10-2018 AL538_00270 45e783bfdcdcb98f5e901cb0bba82fd2 145 Pfam PF10980 Protein of unknown function (DUF2787) 16 140 1.3E-37 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 AL538_25815 35c4f3e891b93193957d50616b0f40cf 285 Pfam PF04116 Fatty acid hydroxylase superfamily 92 226 4.5E-31 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AL538_13585 61e8bc3abff6038169e4a6edd116eedc 116 SUPERFAMILY SSF54913 1 102 9.18E-22 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL538_13585 61e8bc3abff6038169e4a6edd116eedc 116 SMART SM00938 6 104 4.1E-6 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AL538_13585 61e8bc3abff6038169e4a6edd116eedc 116 Gene3D G3DSA:3.30.70.120 1 103 7.7E-15 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL538_14665 115d13ed8f6ac876b51ff0e78cbc0759 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 1.9E-264 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 AL538_22700 5ebf26321e365d71709605b0c8b75034 286 PIRSF PIRSF028200 12 286 3.3E-92 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 AL538_01510 94730295541e04c0d1659425b54e4d76 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 10 171 1.9E-54 T 11-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AL538_01510 94730295541e04c0d1659425b54e4d76 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 10 171 6.7E-58 T 11-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 AL538_26600 4fb5e2080d5254fbc192b1bde482b4b8 120 Gene3D G3DSA:3.30.1330.40 1 118 6.6E-30 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_26600 4fb5e2080d5254fbc192b1bde482b4b8 120 SUPERFAMILY SSF55298 1 116 1.18E-26 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_26600 4fb5e2080d5254fbc192b1bde482b4b8 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 4.7E-20 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_14360 c83e01cdf17acbe43616ed315f94e2a0 196 Gene3D G3DSA:1.10.357.10 1 191 1.5E-40 T 11-10-2018 AL538_14360 c83e01cdf17acbe43616ed315f94e2a0 196 SUPERFAMILY SSF48498 82 195 4.85E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AL538_14360 c83e01cdf17acbe43616ed315f94e2a0 196 Pfam PF13305 WHG domain 93 172 3.2E-11 T 11-10-2018 IPR025996 WHG domain AL538_14360 c83e01cdf17acbe43616ed315f94e2a0 196 SUPERFAMILY SSF46689 6 76 3.35E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AL538_00500 d6cb8a88060dfaf59030a5b951c2b9a5 401 SUPERFAMILY SSF56399 212 378 3.34E-10 T 11-10-2018 AL538_00500 d6cb8a88060dfaf59030a5b951c2b9a5 401 Gene3D G3DSA:3.90.176.10 188 390 1.9E-14 T 11-10-2018 AL538_00500 d6cb8a88060dfaf59030a5b951c2b9a5 401 Pfam PF01129 NAD:arginine ADP-ribosyltransferase 292 394 5.9E-6 T 11-10-2018 IPR000768 NAD:arginine ADP-ribosyltransferase, ART GO:0003956|GO:0006471 AL538_00230 3d6e3f7a83d9a985e1adc681ebcb6a3e 430 Pfam PF13584 Oxygen tolerance 68 299 2.4E-26 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AL538_27910 7cb5227179b88a1477e34510f407e746 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 2.9E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_23515 48cca11d3c18bdae371eb789e72f8784 254 SUPERFAMILY SSF52540 2 227 1.51E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_23515 48cca11d3c18bdae371eb789e72f8784 254 SMART SM00382 26 213 3.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AL538_23515 48cca11d3c18bdae371eb789e72f8784 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AL538_23515 48cca11d3c18bdae371eb789e72f8784 254 Pfam PF00005 ABC transporter 19 165 1.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AL538_23515 48cca11d3c18bdae371eb789e72f8784 254 Gene3D G3DSA:3.40.50.300 1 253 1.0E-67 T 11-10-2018 AL538_04585 f989254083da402211b03f72d1cbf46b 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.702 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL538_04585 f989254083da402211b03f72d1cbf46b 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 1.8E-101 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AL538_24990 5f3d6f3a518bdf6080ce2cc8b22b196d 156 SMART SM00953 15 143 5.0E-16 T 11-10-2018 IPR014914 RES domain AL538_24990 5f3d6f3a518bdf6080ce2cc8b22b196d 156 Pfam PF08808 RES domain 2 151 4.1E-25 T 11-10-2018 IPR014914 RES domain AL538_27200 ee1ff8b9a11b560accb9470a38711ffd 76 Gene3D G3DSA:1.20.120.910 2 73 2.2E-13 T 11-10-2018 AL538_27200 ee1ff8b9a11b560accb9470a38711ffd 76 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 40 70 8.7E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AL538_27200 ee1ff8b9a11b560accb9470a38711ffd 76 SUPERFAMILY SSF57716 40 73 1.19E-6 T 11-10-2018 AL538_06080 5def2037fb5c74cd6a32999abe8f8914 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 6.0E-27 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AL538_06080 5def2037fb5c74cd6a32999abe8f8914 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 1.6E-155 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 AL538_06080 5def2037fb5c74cd6a32999abe8f8914 427 Pfam PF07670 Nucleoside recognition 99 195 6.9E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_06080 5def2037fb5c74cd6a32999abe8f8914 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 1.3E-74 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AL538_15920 1177fa9a218aa03777054b72f730fdb1 580 Pfam PF02065 Melibiase 162 352 5.5E-18 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 AL538_15920 1177fa9a218aa03777054b72f730fdb1 580 Gene3D G3DSA:3.20.20.70 188 495 6.4E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_15920 1177fa9a218aa03777054b72f730fdb1 580 SUPERFAMILY SSF51445 195 533 2.27E-76 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AL538_25125 aec39cd97031f81f076f2c14db19a007 199 Pfam PF01292 Prokaryotic cytochrome b561 23 189 2.8E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AL538_25125 aec39cd97031f81f076f2c14db19a007 199 SUPERFAMILY SSF81342 20 189 1.57E-23 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AL538_20325 027a889c6eab13dbabfedf0e40671da4 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 1.3E-65 T 11-10-2018 IPR021438 Protein of unknown function DUF3087 AL538_09020 eae27519fade66c23b8deafb676c0cb8 206 Pfam PF07947 YhhN family 26 204 2.9E-31 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AL538_27225 3c28f2c9493eb4a97825ff9a96440596 520 Pfam PF06074 Protein of unknown function (DUF935) 3 512 2.8E-191 T 11-10-2018 IPR009279 Protein of unknown function DUF935 AL538_21920 daff766d4577f13e194d5434dc2d27c6 108 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 2.3E-23 T 11-10-2018 IPR025294 Protein of unknown function DUF4156 AL538_02425 70b48ab0d37a7d515e678265eb7357f6 164 Pfam PF05117 Family of unknown function (DUF695) 27 160 7.0E-15 T 11-10-2018 IPR016097 Domain of unknown function DUF695 AL538_27775 b8a7764e07d5bbfd9c53030550156035 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.0E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_22115 07c5027cb95dc7eb796312e39ddd2be5 408 Pfam PF10082 Putative beta-barrel porin 2 41 405 3.1E-29 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 AL538_22115 07c5027cb95dc7eb796312e39ddd2be5 408 SUPERFAMILY SSF56925 292 406 1.23E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AL538_24145 f0cb54b89a84e384da7bc44183171412 261 Pfam PF01435 Peptidase family M48 61 245 2.5E-44 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AL538_24145 f0cb54b89a84e384da7bc44183171412 261 Gene3D G3DSA:3.30.2010.10 50 139 8.3E-7 T 11-10-2018 AL538_23775 9e1a04ba5ce88c0e6b925c81fe62c6a4 139 Pfam PF03061 Thioesterase superfamily 55 120 3.6E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AL538_23775 9e1a04ba5ce88c0e6b925c81fe62c6a4 139 SUPERFAMILY SSF54637 7 132 2.69E-25 T 11-10-2018 IPR029069 HotDog domain superfamily AL538_23775 9e1a04ba5ce88c0e6b925c81fe62c6a4 139 Gene3D G3DSA:3.10.129.10 1 135 1.7E-23 T 11-10-2018 AL538_20935 42d89a1e33a497e9ff821e35a6d84aa1 119 PIRSF PIRSF028299 1 118 3.0E-22 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL538_20935 42d89a1e33a497e9ff821e35a6d84aa1 119 Pfam PF11777 Protein of unknown function (DUF3316) 6 113 5.4E-13 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 Gene3D G3DSA:1.25.40.10 140 337 2.3E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 SUPERFAMILY SSF48452 178 311 3.13E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 SUPERFAMILY SSF48371 69 146 2.72E-6 T 11-10-2018 IPR016024 Armadillo-type fold AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 Pfam PF13432 Tetratricopeptide repeat 178 241 1.1E-6 T 11-10-2018 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 SMART SM00028 241 274 88.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 SMART SM00028 173 206 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_23220 8b0bab5ef319b058aa174d71e8fce9fe 357 SMART SM00028 207 240 0.38 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AL538_15305 304ad9e2396f5b972673aadf873c7996 118 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_15305 304ad9e2396f5b972673aadf873c7996 118 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.9E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_15305 304ad9e2396f5b972673aadf873c7996 118 Gene3D G3DSA:1.10.1660.10 1 118 4.1E-35 T 11-10-2018 AL538_15305 304ad9e2396f5b972673aadf873c7996 118 SMART SM00422 1 70 2.2E-24 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AL538_15305 304ad9e2396f5b972673aadf873c7996 118 SUPERFAMILY SSF46955 1 114 1.72E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 Gene3D G3DSA:3.10.180.10 3 154 9.9E-45 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 1.7E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 Gene3D G3DSA:3.10.180.10 158 355 4.6E-69 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 SUPERFAMILY SSF54593 5 341 1.08E-76 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 2.7E-130 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 5.5E-56 T 11-10-2018 AL538_01665 f408b120da9e3844fd4903804ac09fe5 357 PIRSF PIRSF009283 1 355 9.3E-125 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AL538_10130 b3ab575850256678dc0019bbdb7e4822 142 SUPERFAMILY SSF55729 1 126 7.2E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_10130 b3ab575850256678dc0019bbdb7e4822 142 Gene3D G3DSA:3.40.630.30 1 137 4.8E-15 T 11-10-2018 AL538_10130 b3ab575850256678dc0019bbdb7e4822 142 Pfam PF00583 Acetyltransferase (GNAT) family 30 102 2.5E-7 T 11-10-2018 IPR000182 GNAT domain AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 SUPERFAMILY SSF53850 96 292 6.88E-11 T 11-10-2018 AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 Gene3D G3DSA:1.10.10.10 1 86 1.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 Gene3D G3DSA:3.40.190.10 169 240 1.9E-7 T 11-10-2018 AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 7.4E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 SUPERFAMILY SSF46785 4 81 2.24E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AL538_23555 d1d9b8660fa34dbf1436bac2a55a5d84 295 Gene3D G3DSA:3.40.190.10 88 168 1.9E-7 T 11-10-2018 AL538_03080 6bcf5e1f1563044da5889a74b8e62601 243 SUPERFAMILY SSF53098 44 231 2.89E-38 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AL538_03080 6bcf5e1f1563044da5889a74b8e62601 243 Pfam PF00929 Exonuclease 54 224 9.4E-15 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_03080 6bcf5e1f1563044da5889a74b8e62601 243 SMART SM00479 52 233 1.7E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AL538_03080 6bcf5e1f1563044da5889a74b8e62601 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 48 233 7.1E-22 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AL538_03080 6bcf5e1f1563044da5889a74b8e62601 243 Gene3D G3DSA:3.30.420.10 47 233 2.2E-36 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AL538_19810 ab61e4d555dd957839ffd5fa3f6a0d56 175 Pfam PF11188 Protein of unknown function (DUF2975) 68 175 4.2E-16 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 AL538_11055 66e8d12628b49eaf86b1e9d48593ae7a 66 Gene3D G3DSA:3.30.1910.10 2 64 4.2E-19 T 11-10-2018 AL538_11055 66e8d12628b49eaf86b1e9d48593ae7a 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 1.1E-25 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL538_11055 66e8d12628b49eaf86b1e9d48593ae7a 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 64 2.0E-23 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 AL538_22910 ecbe799df5b9ef404f9412048ac5033a 358 Gene3D G3DSA:2.120.10.30 15 358 4.0E-100 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AL538_22910 ecbe799df5b9ef404f9412048ac5033a 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 2.2E-111 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AL538_22910 ecbe799df5b9ef404f9412048ac5033a 358 SUPERFAMILY SSF50952 16 350 5.49E-39 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AL538_13725 3ca652d5dea2cf3ce4e129ae1f1e65ff 250 Pfam PF08907 Domain of unknown function (DUF1853) 28 213 9.5E-39 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 AL538_22825 8ef57744e83ead8a5d6e677f3d3a33dc 411 Pfam PF02687 FtsX-like permease family 299 403 2.0E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_22825 8ef57744e83ead8a5d6e677f3d3a33dc 411 Pfam PF12704 MacB-like periplasmic core domain 19 228 4.0E-16 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_01150 b11d01270cd7e9dbeeb71a30650ed94b 148 Pfam PF01478 Type IV leader peptidase family 13 108 3.5E-8 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AL538_03180 e495cefabfe0fa3be546af1ae1f92b26 136 Pfam PF03918 Cytochrome C biogenesis protein 27 135 3.2E-41 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AL538_03180 e495cefabfe0fa3be546af1ae1f92b26 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 15 135 2.6E-48 T 11-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AL538_03180 e495cefabfe0fa3be546af1ae1f92b26 136 Gene3D G3DSA:1.10.8.640 28 113 3.3E-32 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AL538_15105 5c867302013a1db74e6e766e8bbb22ff 135 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 35 129 6.5E-9 T 11-10-2018 IPR039366 YscW/ExsB AL538_15105 5c867302013a1db74e6e766e8bbb22ff 135 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 10 129 1.5E-29 T 11-10-2018 IPR013400 Type III secretion system chaperone, YscW AL538_22755 e7f2bd783ddf983f7e32a3f8f151c7a3 799 SUPERFAMILY SSF49452 713 777 9.02E-5 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 AL538_22755 e7f2bd783ddf983f7e32a3f8f151c7a3 799 Pfam PF00577 Outer membrane usher protein 255 605 2.1E-7 T 11-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 AL538_19490 e34af2cfcaa7627459a120c2a30d2d00 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 8.3E-12 T 11-10-2018 IPR001451 Hexapeptide repeat AL538_19490 e34af2cfcaa7627459a120c2a30d2d00 217 Gene3D G3DSA:2.160.10.10 1 216 3.0E-63 T 11-10-2018 AL538_19490 e34af2cfcaa7627459a120c2a30d2d00 217 SUPERFAMILY SSF51161 57 212 3.6E-39 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AL538_19490 e34af2cfcaa7627459a120c2a30d2d00 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AL538_24155 63891a4ab81a978f35f8d06fa9aaf2cd 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 3.3E-34 T 11-10-2018 IPR021811 Protein of unknown function DUF3389 AL538_25460 5ff7405c62f7dcb2e299712f6a04f065 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 523 5.2E-142 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 240 252 8.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 224 240 8.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 224 8.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 SUPERFAMILY SSF46894 202 267 2.75E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 SMART SM00421 207 264 7.4E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 Pfam PF00196 Bacterial regulatory proteins, luxR family 209 261 1.2E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AL538_21770 6fbe4df474cb4076eb21c3d5dc0c5a9d 273 Gene3D G3DSA:1.10.10.10 182 270 3.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AL538_16410 4113c76fa91e8c30fcec59aca8485e8e 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.3E-96 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 AL538_03920 c02d5ab5a04215ad9ae7d67434583179 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 9.3E-16 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AL538_25475 01c650cc4f2b04bef919abb120ac7329 132 Pfam PF01042 Endoribonuclease L-PSP 17 126 1.7E-22 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AL538_25475 01c650cc4f2b04bef919abb120ac7329 132 SUPERFAMILY SSF55298 13 127 1.04E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_25475 01c650cc4f2b04bef919abb120ac7329 132 Gene3D G3DSA:3.30.1330.40 9 127 4.1E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AL538_05220 35a98d8b84abee435491a62226497c55 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.9E-31 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AL538_05220 35a98d8b84abee435491a62226497c55 116 SUPERFAMILY SSF52833 2 114 1.28E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_05220 35a98d8b84abee435491a62226497c55 116 Gene3D G3DSA:3.40.30.10 2 114 3.0E-42 T 11-10-2018 AL538_05220 35a98d8b84abee435491a62226497c55 116 Pfam PF03960 ArsC family 6 112 1.8E-19 T 11-10-2018 IPR006660 Arsenate reductase-like AL538_04790 f923cfe713040de00c74d51084ebe371 134 Pfam PF04304 Protein of unknown function (DUF454) 9 122 6.0E-39 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AL538_04790 f923cfe713040de00c74d51084ebe371 134 PIRSF PIRSF016789 8 129 4.8E-43 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AL538_26515 07b08a9e16547a451a8b482872aadd02 200 SUPERFAMILY SSF55729 1 172 1.95E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_26515 07b08a9e16547a451a8b482872aadd02 200 Gene3D G3DSA:3.40.630.30 3 200 6.4E-37 T 11-10-2018 AL538_26515 07b08a9e16547a451a8b482872aadd02 200 Pfam PF00583 Acetyltransferase (GNAT) family 27 165 6.0E-7 T 11-10-2018 IPR000182 GNAT domain AL538_17245 c58d577b65e21c2ec4a72746a1ef2ea2 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 145 1.7E-36 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 AL538_18550 c89b826825ea5abeab6055affcd8fbeb 416 Gene3D G3DSA:3.40.50.720 5 119 2.5E-5 T 11-10-2018 AL538_23405 14e9cd7e22ed9a61fb78ee0008f08f81 504 SMART SM00240 29 80 4.9E-8 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL538_23405 14e9cd7e22ed9a61fb78ee0008f08f81 504 SUPERFAMILY SSF49879 21 104 7.65E-24 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 AL538_23405 14e9cd7e22ed9a61fb78ee0008f08f81 504 Pfam PF00498 FHA domain 31 97 5.3E-16 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AL538_23405 14e9cd7e22ed9a61fb78ee0008f08f81 504 Gene3D G3DSA:2.60.200.20 5 111 6.0E-21 T 11-10-2018 AL538_23735 c92d8e8722156bfbdb169d1447215bcc 454 SUPERFAMILY SSF56219 32 450 2.16E-13 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AL538_23735 c92d8e8722156bfbdb169d1447215bcc 454 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 445 3.3E-27 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AL538_11190 13067d8b292f34beb4612a6d0ee8a392 126 SUPERFAMILY SSF110069 5 126 2.62E-46 T 11-10-2018 IPR036767 ApaG domain superfamily AL538_11190 13067d8b292f34beb4612a6d0ee8a392 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.479 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG AL538_11190 13067d8b292f34beb4612a6d0ee8a392 126 Pfam PF04379 ApaG domain 18 102 6.8E-33 T 11-10-2018 IPR007474 ApaG domain AL538_11190 13067d8b292f34beb4612a6d0ee8a392 126 Gene3D G3DSA:2.60.40.1470 1 126 1.1E-46 T 11-10-2018 IPR036767 ApaG domain superfamily AL538_17595 b0499101d27f7bda57380db59a3ef269 172 Pfam PF05433 Glycine zipper 2TM domain 68 108 2.7E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AL538_23830 ce77959fc2c55dfc69b2f930ce647088 164 Pfam PF14317 YcxB-like protein 99 154 1.0E-6 T 11-10-2018 IPR025588 YcxB-like protein AL538_16850 b54df3e89155abe94d4dbfd9b5d4cbe9 211 Pfam PF01810 LysE type translocator 15 208 1.8E-32 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_16850 b54df3e89155abe94d4dbfd9b5d4cbe9 211 PIRSF PIRSF006324 1 210 2.1E-56 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_08870 10a09b6019475742d229777816a65f9e 322 Pfam PF13280 WYL domain 156 309 1.6E-18 T 11-10-2018 IPR026881 WYL domain AL538_25705 77f53b8ec5301a6cb8fa0d135407db77 243 Gene3D G3DSA:3.40.50.1580 2 243 8.5E-76 T 11-10-2018 AL538_25705 77f53b8ec5301a6cb8fa0d135407db77 243 SUPERFAMILY SSF53167 4 220 2.36E-68 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AL538_25705 77f53b8ec5301a6cb8fa0d135407db77 243 Pfam PF01048 Phosphorylase superfamily 17 199 3.4E-35 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AL538_01075 aec535cc73c6525a7c65b9d6de9a9d1a 363 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 22 344 9.9E-73 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AL538_01075 aec535cc73c6525a7c65b9d6de9a9d1a 363 SUPERFAMILY SSF56235 22 352 5.17E-95 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AL538_01075 aec535cc73c6525a7c65b9d6de9a9d1a 363 Gene3D G3DSA:3.60.60.10 22 361 1.8E-114 T 11-10-2018 AL538_11860 3a6fb11294db51e1e9fa268d8204d290 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.953 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AL538_11860 3a6fb11294db51e1e9fa268d8204d290 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 5.0E-94 T 11-10-2018 IPR005583 Peroxide stress protein YaaA AL538_12750 3182d2adcbc0f796fe30f9e6d31de53e 208 PIRSF PIRSF004525 1 208 3.1E-10 T 11-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted AL538_06595 b77b237dbee70535afb0e9ccecb70d8a 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.002 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 AL538_06595 b77b237dbee70535afb0e9ccecb70d8a 153 Pfam PF09335 SNARE associated Golgi protein 54 146 1.6E-9 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_17980 7878b9fdf24acfed46940127909724c2 142 Pfam PF10990 Protein of unknown function (DUF2809) 50 132 4.7E-23 T 11-10-2018 IPR021257 Protein of unknown function DUF2809 AL538_24010 eb4961aab487b3d94ade244600866014 434 SUPERFAMILY SSF53613 34 417 9.82E-48 T 11-10-2018 IPR029056 Ribokinase-like AL538_24010 eb4961aab487b3d94ade244600866014 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 1.7E-12 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AL538_13345 36d4119fffcfd6e5a15e1c4cbc4773ea 149 Pfam PF04214 Protein of unknown function, DUF 48 118 3.6E-30 T 11-10-2018 IPR007332 Protein of unknown function DUF411 AL538_10210 58e5b0ca2d159f93cd166f7b74b10b75 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 6.5E-91 T 11-10-2018 IPR021342 Protein of unknown function DUF2959 AL538_26815 203f30a8916c2718bf7075c1dccb2434 131 Gene3D G3DSA:2.40.30.70 1 129 6.0E-36 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily AL538_26815 203f30a8916c2718bf7075c1dccb2434 131 SUPERFAMILY SSF118196 6 127 6.8E-34 T 11-10-2018 IPR036413 YaeB-like superfamily AL538_26815 203f30a8916c2718bf7075c1dccb2434 131 Pfam PF01980 Uncharacterised protein family UPF0066 32 127 6.7E-27 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain AL538_02710 9936ca82da7ef9800def6b11415a1084 135 Gene3D G3DSA:2.170.150.70 5 120 4.4E-15 T 11-10-2018 AL538_02710 9936ca82da7ef9800def6b11415a1084 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 114 2.7E-13 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AL538_02710 9936ca82da7ef9800def6b11415a1084 135 SUPERFAMILY SSF51316 2 133 5.13E-36 T 11-10-2018 IPR011057 Mss4-like superfamily AL538_27915 04814045255b4dbfd088f70a70dec591 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 7.9E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_07550 447974d506c8fa27d957b05f752ec662 482 SUPERFAMILY SSF53067 42 154 5.18E-10 T 11-10-2018 AL538_07550 447974d506c8fa27d957b05f752ec662 482 PIRSF PIRSF028153 1 482 9.1E-224 T 11-10-2018 IPR016871 MSHA biogenesis protein, MshI AL538_02620 41a5122e6087b82a487f655652d240e8 155 Pfam PF00293 NUDIX domain 22 129 1.3E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AL538_02620 41a5122e6087b82a487f655652d240e8 155 PRINTS PR00502 NUDIX hydrolase family signature 59 74 1.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_02620 41a5122e6087b82a487f655652d240e8 155 PRINTS PR00502 NUDIX hydrolase family signature 45 59 1.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AL538_02620 41a5122e6087b82a487f655652d240e8 155 Gene3D G3DSA:3.90.79.10 2 147 4.8E-41 T 11-10-2018 AL538_02620 41a5122e6087b82a487f655652d240e8 155 SUPERFAMILY SSF55811 13 140 4.47E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AL538_02620 41a5122e6087b82a487f655652d240e8 155 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AL538_18160 8eda5db62b7fd4cd33cf344cd36a929e 76 Gene3D G3DSA:3.40.30.10 1 70 2.6E-9 T 11-10-2018 AL538_18160 8eda5db62b7fd4cd33cf344cd36a929e 76 SUPERFAMILY SSF52833 1 67 9.1E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AL538_03365 a5443014ab398e01bc4505cdf1096369 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-4 T 11-10-2018 IPR012639 Tryptophan operon leader peptide AL538_03365 a5443014ab398e01bc4505cdf1096369 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 1.8E-26 T 11-10-2018 IPR012639 Tryptophan operon leader peptide AL538_23210 6ffe2e999aeddcb6aacd691c9cf1bf1d 262 Pfam PF03781 Sulfatase-modifying factor enzyme 1 38 259 1.4E-47 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AL538_23210 6ffe2e999aeddcb6aacd691c9cf1bf1d 262 Gene3D G3DSA:3.90.1580.10 28 260 3.2E-59 T 11-10-2018 AL538_23210 6ffe2e999aeddcb6aacd691c9cf1bf1d 262 SUPERFAMILY SSF56436 37 261 1.08E-56 T 11-10-2018 IPR016187 C-type lectin fold AL538_07230 c64921428a07984a65cf37f4cc191c9b 159 Pfam PF06271 RDD family 9 149 1.1E-20 T 11-10-2018 IPR010432 RDD AL538_11845 73a7e02b82c78622899b59dd14e61794 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 1.9E-14 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AL538_11845 73a7e02b82c78622899b59dd14e61794 189 Gene3D G3DSA:1.20.120.520 4 161 1.4E-16 T 11-10-2018 AL538_00640 4005aa5fb8d093220d463bb4a749de5f 207 Pfam PF11748 Protein of unknown function (DUF3306) 4 122 5.7E-26 T 11-10-2018 IPR021735 Protein of unknown function DUF3306 AL538_25440 22d3bf47ae03acbe40c6fb98266deac3 265 Gene3D G3DSA:3.40.190.100 92 205 2.2E-39 T 11-10-2018 AL538_25440 22d3bf47ae03acbe40c6fb98266deac3 265 Gene3D G3DSA:3.40.190.10 10 263 2.2E-39 T 11-10-2018 AL538_25440 22d3bf47ae03acbe40c6fb98266deac3 265 SUPERFAMILY SSF53850 9 263 2.39E-42 T 11-10-2018 AL538_25440 22d3bf47ae03acbe40c6fb98266deac3 265 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 9 261 1.5E-44 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AL538_19960 b3a7458328737dfd05c6a5e046d82547 150 SUPERFAMILY SSF55729 1 146 6.45E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_19960 b3a7458328737dfd05c6a5e046d82547 150 Gene3D G3DSA:3.40.630.30 1 149 4.2E-14 T 11-10-2018 AL538_19960 b3a7458328737dfd05c6a5e046d82547 150 Pfam PF00583 Acetyltransferase (GNAT) family 19 124 4.7E-9 T 11-10-2018 IPR000182 GNAT domain AL538_25950 8ee97fb711e56f7095e8b3df79f45607 376 SUPERFAMILY SSF56059 110 310 6.01E-8 T 11-10-2018 AL538_18795 c1f54a43a95a986e2e7becad422026c0 321 Pfam PF11335 Protein of unknown function (DUF3137) 163 307 5.2E-21 T 11-10-2018 IPR021484 Protein of unknown function DUF3137 AL538_03610 d223c06ed7eb72d6caed5a3c2736195a 423 Gene3D G3DSA:1.20.1600.10 26 423 6.4E-76 T 11-10-2018 AL538_03610 d223c06ed7eb72d6caed5a3c2736195a 423 SUPERFAMILY SSF56954 6 412 1.7E-74 T 11-10-2018 AL538_03610 d223c06ed7eb72d6caed5a3c2736195a 423 Pfam PF02321 Outer membrane efflux protein 28 204 2.4E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_03610 d223c06ed7eb72d6caed5a3c2736195a 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.0E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AL538_03620 3376f89e0e9bd99d9eb2700bc9cbbf29 107 Gene3D G3DSA:3.60.15.10 19 107 1.9E-16 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AL538_12190 40498011170a1b5ad5bcbac959d470dd 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.133 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL538_12190 40498011170a1b5ad5bcbac959d470dd 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.2E-125 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AL538_19225 0812d23ee506607060208d0f26c43b37 481 Pfam PF02386 Cation transport protein 62 474 1.9E-45 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AL538_19225 0812d23ee506607060208d0f26c43b37 481 PIRSF PIRSF006247 1 481 2.3E-161 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 AL538_21725 b1f75bec06faf964e5e5a78c8e9daea2 408 Pfam PF03616 Sodium/glutamate symporter 12 376 9.6E-115 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_21725 b1f75bec06faf964e5e5a78c8e9daea2 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 405 4.0E-132 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_21725 b1f75bec06faf964e5e5a78c8e9daea2 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 8 407 23.575 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_14920 1e669b58a964aaac5e2697732d71ab8f 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.1E-178 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_14920 1e669b58a964aaac5e2697732d71ab8f 528 PIRSF PIRSF006446 337 526 3.8E-33 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_14920 1e669b58a964aaac5e2697732d71ab8f 528 PIRSF PIRSF006446 1 332 4.3E-116 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AL538_20675 34a8fb584e60e8de42a0c6b93589b307 135 Gene3D G3DSA:3.10.450.10 45 112 4.8E-5 T 11-10-2018 AL538_20675 34a8fb584e60e8de42a0c6b93589b307 135 SUPERFAMILY SSF54403 47 116 3.4E-9 T 11-10-2018 AL538_02170 348f19cae9e1c337f760a532c2743876 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.0E-98 T 11-10-2018 IPR021974 Protein of unknown function DUF3581 AL538_12925 d415b654e6ba2ed3ed071eeb20a4d6bf 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 6.0E-29 T 11-10-2018 IPR006696 Protein of unknown function DUF423 AL538_03570 56001e1fe614201551761fad5d198207 324 PIRSF PIRSF034367 1 324 5.4E-200 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AL538_03570 56001e1fe614201551761fad5d198207 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 2.0E-186 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 AL538_03165 4f088576ddd5974c64170b660cf3b493 420 Gene3D G3DSA:1.20.1420.20 16 402 1.1E-86 T 11-10-2018 IPR038352 Imelysin-like domain superfamily AL538_03165 4f088576ddd5974c64170b660cf3b493 420 Pfam PF09375 Imelysin 40 397 3.5E-97 T 11-10-2018 IPR018976 Imelysin-like domain AL538_13610 c22c4e1fb9f09116f07815b9f576b077 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 1.1E-35 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_16955 c99a0f144adbed43a6032024cc810b82 309 Pfam PF06996 Type VI secretion, TssG 10 294 4.2E-46 T 11-10-2018 IPR010732 Type VI secretion, TssG-like AL538_16210 8f692793ccacf8b7a26360407eed6ece 246 Pfam PF11140 Protein of unknown function (DUF2913) 29 240 3.1E-83 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 AL538_14950 10f43484f43dc58d28bb9dc577b3050b 147 Gene3D G3DSA:3.30.420.270 63 136 8.6E-17 T 11-10-2018 AL538_14950 10f43484f43dc58d28bb9dc577b3050b 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 8.7E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AL538_14950 10f43484f43dc58d28bb9dc577b3050b 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.253 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 AL538_27630 3802fe59544e08a9c7bc258408cf8562 51 Pfam PF11665 Protein of unknown function (DUF3265) 20 46 1.8E-7 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_26030 8e09279f8b092568b24fbbe01ac37e50 68 Pfam PF04964 Flp/Fap pilin component 16 63 1.5E-16 T 11-10-2018 IPR007047 Flp/Fap pilin component AL538_20430 f063012d9bae7bf315846a60e769092c 132 Gene3D G3DSA:3.30.1370.150 73 132 6.0E-29 T 11-10-2018 AL538_20430 f063012d9bae7bf315846a60e769092c 132 Pfam PF10928 Protein of unknown function (DUF2810) 79 130 2.8E-29 T 11-10-2018 IPR021230 Protein of unknown function DUF2810 AL538_10535 f4d812610b1561265aa3f43c97ba5ba9 510 SUPERFAMILY SSF53649 207 470 8.01E-15 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AL538_10535 f4d812610b1561265aa3f43c97ba5ba9 510 Gene3D G3DSA:3.40.720.10 196 492 1.3E-42 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AL538_10535 f4d812610b1561265aa3f43c97ba5ba9 510 Pfam PF00884 Sulfatase 208 469 1.3E-24 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 AL538_05150 8c679fe4d6cd18f58dfc5c6541aeb01e 670 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 1.7E-20 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AL538_05150 8c679fe4d6cd18f58dfc5c6541aeb01e 670 Pfam PF07196 Flagellin hook IN motif 125 177 6.2E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AL538_05150 8c679fe4d6cd18f58dfc5c6541aeb01e 670 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 434 658 1.6E-54 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 AL538_02520 b8978ced4b655830eadc7ae42e410448 173 Gene3D G3DSA:3.40.630.30 1 158 1.6E-22 T 11-10-2018 AL538_02520 b8978ced4b655830eadc7ae42e410448 173 Pfam PF13527 Acetyltransferase (GNAT) domain 14 125 4.6E-9 T 11-10-2018 AL538_02520 b8978ced4b655830eadc7ae42e410448 173 SUPERFAMILY SSF55729 13 127 1.83E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_05085 33558d6e03df19f7ffe729c3a0d64e1e 704 Pfam PF02120 Flagellar hook-length control protein FliK 574 657 2.1E-25 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AL538_05085 33558d6e03df19f7ffe729c3a0d64e1e 704 Gene3D G3DSA:3.30.750.140 553 667 1.0E-31 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily AL538_21405 40d0f9723be1a5d107daac534d384412 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 2.3E-23 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AL538_27745 14ebe5a6249a29970d8813fe7fcdfba9 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 8.3E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_25385 432fd6299168959952491a31b6de87c1 274 Pfam PF11060 Protein of unknown function (DUF2861) 28 273 2.2E-52 T 11-10-2018 IPR021290 Protein of unknown function DUF2861 AL538_27805 23e90c2e71224048c21a4f2559c4a038 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 2.4E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_27600 02a8c17e84ff9c5072c3df4dd0e5ff46 49 Pfam PF11665 Protein of unknown function (DUF3265) 22 47 1.1E-10 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_12830 5b5c1f33ddd0588be7e6551cb0c2c8cf 129 Pfam PF07417 Transcriptional regulator Crl 6 123 9.1E-49 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AL538_12830 5b5c1f33ddd0588be7e6551cb0c2c8cf 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.371 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 AL538_12830 5b5c1f33ddd0588be7e6551cb0c2c8cf 129 Gene3D G3DSA:3.30.310.230 2 128 2.0E-45 T 11-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 AL538_27855 ebd51d57abb2152875f6be89a89f0dd0 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 1.0E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_20545 71099b3eaf0115e7f237f41cd1f23626 289 Gene3D G3DSA:3.40.50.1980 68 189 2.3E-7 T 11-10-2018 AL538_20545 71099b3eaf0115e7f237f41cd1f23626 289 SUPERFAMILY SSF53807 26 266 4.32E-21 T 11-10-2018 AL538_27865 90c6f9e0fe1acd09da43d5496b4bf0ee 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.3E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_13615 ada32f6be4e4ccc01026d4617fb5e6c8 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 3.2E-69 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL538_13615 ada32f6be4e4ccc01026d4617fb5e6c8 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 7.0E-92 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 AL538_09115 ef92f35b6654791e3df81a6dd02a70f3 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 8.0E-70 T 11-10-2018 IPR007435 Protein of unknown function DUF484 AL538_09115 ef92f35b6654791e3df81a6dd02a70f3 234 Gene3D G3DSA:3.30.450.40 43 219 8.9E-36 T 11-10-2018 IPR029016 GAF-like domain superfamily AL538_14655 d4f26abde885d9749775e36fab37d70b 325 Gene3D G3DSA:2.40.128.140 20 323 4.8E-54 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily AL538_14655 d4f26abde885d9749775e36fab37d70b 325 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 322 1.7E-84 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 AL538_21825 f113536c69e564c97dbb481e3f78eff8 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 2.1E-60 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 AL538_07355 f1bdd259ab77f18e050316b89e28cf77 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 7.6E-49 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL538_07355 f1bdd259ab77f18e050316b89e28cf77 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 3.0E-46 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AL538_07355 f1bdd259ab77f18e050316b89e28cf77 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 24.104 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL538_07355 f1bdd259ab77f18e050316b89e28cf77 187 Gene3D G3DSA:2.60.450.10 59 186 3.1E-38 T 11-10-2018 AL538_07355 f1bdd259ab77f18e050316b89e28cf77 187 PIRSF PIRSF028513 2 185 4.4E-30 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AL538_20715 fc5412d34a90835ad0e1d0f90b60a472 361 Pfam PF12060 Domain of unknown function (DUF3541) 30 252 1.7E-111 T 11-10-2018 IPR021928 Protein of unknown function DUF3541 AL538_08910 d7b806da93f12736dc8edf1300e51ef7 239 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.0E-95 T 11-10-2018 IPR021974 Protein of unknown function DUF3581 AL538_16135 b0c8dcafc6f0fd9588a630fcd9cc194d 147 Pfam PF03724 META domain 34 140 3.9E-28 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL538_16135 b0c8dcafc6f0fd9588a630fcd9cc194d 147 Gene3D G3DSA:2.40.128.270 40 142 4.1E-30 T 11-10-2018 IPR038670 HslJ-like superfamily AL538_19005 790fd316c2e1a7f5669428a517101d23 450 PIRSF PIRSF006603 1 445 4.6E-59 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_19005 790fd316c2e1a7f5669428a517101d23 450 Pfam PF01554 MatE 20 181 1.4E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_19005 790fd316c2e1a7f5669428a517101d23 450 Pfam PF01554 MatE 257 393 5.9E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_23525 60ce059b6852491f2d2ea3bf79ae81fb 179 Pfam PF13689 Domain of unknown function (DUF4154) 34 170 5.9E-24 T 11-10-2018 IPR025293 YfiR-like AL538_00265 d482ee80495c8987d80febac0406b41d 274 Pfam PF13280 WYL domain 164 242 5.8E-6 T 11-10-2018 IPR026881 WYL domain AL538_11800 33f44a5a95ec709c7d01c0a1b0a6125d 160 Gene3D G3DSA:3.50.30.40 1 160 2.8E-64 T 11-10-2018 AL538_11800 33f44a5a95ec709c7d01c0a1b0a6125d 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.6E-68 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AL538_11800 33f44a5a95ec709c7d01c0a1b0a6125d 160 SUPERFAMILY SSF89562 1 158 1.96E-46 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AL538_11800 33f44a5a95ec709c7d01c0a1b0a6125d 160 Pfam PF03737 Aldolase/RraA 5 152 4.7E-42 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AL538_01110 78767d305b22efc1c919c83897984718 288 Pfam PF00482 Type II secretion system (T2SS), protein F 152 278 8.3E-16 T 11-10-2018 IPR018076 Type II secretion system F domain AL538_10470 2dbb77598e7e2247e4d300946e3d955a 317 SUPERFAMILY SSF103481 40 141 7.59E-14 T 11-10-2018 AL538_10470 2dbb77598e7e2247e4d300946e3d955a 317 Pfam PF00892 EamA-like transporter family 155 286 8.1E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_10470 2dbb77598e7e2247e4d300946e3d955a 317 Pfam PF00892 EamA-like transporter family 6 139 2.8E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AL538_17905 b59c6167057ce4ef8f14dd3cb3a6fed5 199 Pfam PF07681 DoxX 23 111 2.9E-14 T 11-10-2018 IPR032808 DoxX family AL538_01305 fc37d6614aa30b86a0a6edb20465bd5d 502 Pfam PF11840 Protein of unknown function (DUF3360) 17 498 4.0E-268 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 AL538_05285 08218c9a13d529ee366059208b7af7a2 146 Pfam PF09842 Predicted membrane protein (DUF2069) 21 122 1.1E-33 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane AL538_27935 253d484e44efe4dc5354b93dbf72b4f7 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.2E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_27770 da0ba25715c1256b8a950cff06567883 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 8.1E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_03195 850a8d49eea45ce039e9b9ec0b24bc84 323 Pfam PF03916 Polysulphide reductase, NrfD 8 322 2.9E-75 T 11-10-2018 IPR005614 NrfD family AL538_03195 850a8d49eea45ce039e9b9ec0b24bc84 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 5.4E-144 T 11-10-2018 IPR017566 NrfD AL538_13995 eddf085e138601bfce7e7ed1f2a9d17c 459 Gene3D G3DSA:3.40.50.300 38 244 1.2E-6 T 11-10-2018 AL538_13995 eddf085e138601bfce7e7ed1f2a9d17c 459 SUPERFAMILY SSF52540 49 315 3.19E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_03000 4a8bc93838f64e7bb70bc5a782edb367 453 SUPERFAMILY SSF143548 16 157 3.14E-44 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL538_03000 4a8bc93838f64e7bb70bc5a782edb367 453 Pfam PF03315 Serine dehydratase beta chain 3 155 3.9E-54 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL538_03000 4a8bc93838f64e7bb70bc5a782edb367 453 Gene3D G3DSA:3.30.1330.90 10 159 2.1E-49 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AL538_03000 4a8bc93838f64e7bb70bc5a782edb367 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.9E-226 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AL538_03000 4a8bc93838f64e7bb70bc5a782edb367 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.3E-97 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit AL538_00960 afad02f25f070807fbd2619be7620057 365 SUPERFAMILY SSF161098 155 346 1.44E-40 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00960 afad02f25f070807fbd2619be7620057 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.1E-22 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 AL538_00960 afad02f25f070807fbd2619be7620057 365 Gene3D G3DSA:1.10.3720.10 147 363 1.9E-48 T 11-10-2018 IPR035906 MetI-like superfamily AL538_00960 afad02f25f070807fbd2619be7620057 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 9.7E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AL538_10160 9136df002101fb6244a3a0017c27603b 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 5.4E-45 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 AL538_01855 42fac9e1e31dd7552e378e84d66a85a3 333 Pfam PF11168 Protein of unknown function (DUF2955) 12 147 2.3E-20 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 AL538_01615 6af09c21ac0057250db688095e3c9e27 240 Gene3D G3DSA:3.90.226.10 23 185 6.5E-10 T 11-10-2018 AL538_01615 6af09c21ac0057250db688095e3c9e27 240 SUPERFAMILY SSF52096 27 144 2.98E-11 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AL538_15985 638836f8f93bbf0cc2ad8e9e9fa94c0f 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.6E-94 T 11-10-2018 IPR014319 Phage shock protein, PspA AL538_15985 638836f8f93bbf0cc2ad8e9e9fa94c0f 223 Pfam PF04012 PspA/IM30 family 2 217 7.9E-61 T 11-10-2018 IPR007157 PspA/IM30 AL538_22440 1892d72ccc648177c85a5f69a978b909 412 Gene3D G3DSA:1.10.4160.10 3 411 9.4E-46 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily AL538_22440 1892d72ccc648177c85a5f69a978b909 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 7.3E-64 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 AL538_28175 aa32ec82e525e57cd713192e81172d94 85 SMART SM01234 8 75 2.9E-42 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28175 aa32ec82e525e57cd713192e81172d94 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.398 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28175 aa32ec82e525e57cd713192e81172d94 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 5.0E-24 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28175 aa32ec82e525e57cd713192e81172d94 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 2.6E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_28175 aa32ec82e525e57cd713192e81172d94 85 Pfam PF01809 Haemolytic domain 10 75 6.3E-29 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AL538_23395 7d4556a3149a8de6904f6d7aacbde9f2 438 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 123 1.4E-24 T 11-10-2018 IPR010657 ImpA, N-terminal AL538_00815 47a0b281bd213f9d976e71b169277f97 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 100 2.4E-42 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 AL538_16595 5cc74d5763e08156aa94566bb391360b 575 Pfam PF11949 Protein of unknown function (DUF3466) 289 565 1.9E-42 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 AL538_27925 917a7e05b09166b840c267fdf34c71e5 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.9E-11 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_16995 4b6b76f65d1a7d3118486eb9f3da8874 100 Pfam PF05488 PAAR motif 25 90 2.5E-21 T 11-10-2018 IPR008727 PAAR motif AL538_16995 4b6b76f65d1a7d3118486eb9f3da8874 100 Gene3D G3DSA:2.60.200.60 2 57 1.2E-8 T 11-10-2018 AL538_16995 4b6b76f65d1a7d3118486eb9f3da8874 100 Gene3D G3DSA:2.60.200.60 58 99 4.9E-10 T 11-10-2018 AL538_17140 02aa1cc84a1ad386f0ac283b53fe3f4e 461 Pfam PF04932 O-Antigen ligase 240 377 1.9E-18 T 11-10-2018 IPR007016 O-antigen ligase-related AL538_10695 a2c9bae430c2c6cd1b7b3b499a7bb164 269 Pfam PF04991 LicD family 106 164 4.0E-17 T 11-10-2018 IPR007074 LicD family AL538_10105 4c15188e79b714f8136796e1339508e1 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.775 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL538_10105 4c15188e79b714f8136796e1339508e1 82 Pfam PF02416 mttA/Hcf106 family 4 52 6.5E-13 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AL538_10105 4c15188e79b714f8136796e1339508e1 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 5.4E-21 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AL538_06910 fb3f62769037f28893f35947aa892a6a 209 Pfam PF01810 LysE type translocator 15 201 1.7E-42 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_24730 5c30ce7aff1a47bbb02273aa96d27aee 484 Gene3D G3DSA:3.40.50.410 322 469 1.2E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_24730 5c30ce7aff1a47bbb02273aa96d27aee 484 SUPERFAMILY SSF53300 319 475 1.37E-24 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AL538_24730 5c30ce7aff1a47bbb02273aa96d27aee 484 Pfam PF05762 VWA domain containing CoxE-like protein 316 447 1.1E-11 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AL538_27655 e5917cd37e74e1e4cb21dbcb9e3eafae 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 7.1E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_13815 a71a0b5516752262621993181a83788c 173 Pfam PF03350 Uncharacterized protein family, UPF0114 8 132 7.0E-22 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 AL538_21445 b87f56003002d54e00158d95a780f8b2 479 Pfam PF03929 PepSY-associated TM region 24 416 1.5E-63 T 11-10-2018 IPR005625 PepSY-associated TM protein AL538_00280 db0cbd66bcba1cb2bb78b8157c855682 58 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 1.2E-24 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AL538_11440 b389d8d49327f9cef5a50264d3e8ab36 419 Pfam PF01384 Phosphate transporter family 26 407 1.4E-112 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AL538_02480 d489e8646e52ee359f3f57f41adfc025 136 SUPERFAMILY SSF53927 2 129 3.76E-25 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AL538_02480 d489e8646e52ee359f3f57f41adfc025 136 Gene3D G3DSA:3.40.140.10 2 134 5.4E-28 T 11-10-2018 AL538_14845 1678118847fd51b4a9ccd931cd14b859 263 Pfam PF08241 Methyltransferase domain 52 148 6.3E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AL538_14845 1678118847fd51b4a9ccd931cd14b859 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.315 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AL538_14845 1678118847fd51b4a9ccd931cd14b859 263 SUPERFAMILY SSF53335 7 251 1.86E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AL538_14845 1678118847fd51b4a9ccd931cd14b859 263 Gene3D G3DSA:3.40.50.150 9 263 1.3E-55 T 11-10-2018 AL538_16615 1e346beae641b7694ba2bd0463f22719 447 Pfam PF03616 Sodium/glutamate symporter 8 350 5.1E-14 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AL538_16900 aa28bb724a64115ad32a9464d626fc30 149 SUPERFAMILY SSF55729 2 145 1.59E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_16900 aa28bb724a64115ad32a9464d626fc30 149 Pfam PF00583 Acetyltransferase (GNAT) family 37 135 2.3E-14 T 11-10-2018 IPR000182 GNAT domain AL538_16900 aa28bb724a64115ad32a9464d626fc30 149 Gene3D G3DSA:3.40.630.30 4 141 1.5E-32 T 11-10-2018 AL538_17425 9cd9c480974a4d01d3ee6ed9549d4e80 86 Gene3D G3DSA:3.40.630.30 1 63 8.9E-7 T 11-10-2018 AL538_17425 9cd9c480974a4d01d3ee6ed9549d4e80 86 SUPERFAMILY SSF55729 1 63 2.76E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AL538_11570 2494415cf4d97e51a45b9a507221d538 213 SMART SM00749 125 188 9.7E-4 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL538_11570 2494415cf4d97e51a45b9a507221d538 213 SMART SM00749 48 111 24.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AL538_11570 2494415cf4d97e51a45b9a507221d538 213 Pfam PF04972 BON domain 120 185 3.1E-16 T 11-10-2018 IPR007055 BON domain AL538_11570 2494415cf4d97e51a45b9a507221d538 213 Pfam PF04972 BON domain 44 110 3.9E-12 T 11-10-2018 IPR007055 BON domain AL538_14705 b3384b432f55dbb2284b5ceed85b922b 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 4.8E-23 T 11-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related AL538_05235 3a0ddf972cb72bb814ef95dcdc17a70e 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 3.5E-21 T 11-10-2018 IPR021550 Protein of unknown function DUF2897 AL538_01235 967ed0e7921101c3772b7b7b448ed54c 395 Pfam PF12698 ABC-2 family transporter protein 15 368 3.3E-41 T 11-10-2018 AL538_10630 a02c2966804111f258fe4b75ed4ba601 240 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 176 3.5E-34 T 11-10-2018 IPR002654 Glycosyl transferase, family 25 AL538_24830 fa070f165b47d4d2b05a2d9d3f917a5a 237 Pfam PF08887 GAD-like domain 19 123 8.5E-36 T 11-10-2018 IPR014983 GAD-related AL538_24830 fa070f165b47d4d2b05a2d9d3f917a5a 237 Pfam PF08906 Domain of unknown function (DUF1851) 146 216 8.4E-9 T 11-10-2018 IPR015002 Domain of unknown function DUF1851 AL538_02105 f0cb84839a3ffc6d94ef84f26c1fe34b 129 Gene3D G3DSA:3.10.180.10 7 127 1.3E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_02105 f0cb84839a3ffc6d94ef84f26c1fe34b 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.1E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL538_02105 f0cb84839a3ffc6d94ef84f26c1fe34b 129 SUPERFAMILY SSF54593 3 122 8.94E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL538_27170 d68e12840d080c29cba75c64999f2466 172 Pfam PF06252 Protein of unknown function (DUF1018) 17 135 7.6E-33 T 11-10-2018 IPR009363 Bacteriophage Mu, Gp16 AL538_20990 5a78aa9b3b568e90d5c5458dbe9eadfe 280 Pfam PF02698 DUF218 domain 6 131 1.3E-15 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AL538_13540 2e0511a4ae4f385b6aed51e57d5d848c 468 Gene3D G3DSA:2.40.160.10 70 466 4.5E-10 T 11-10-2018 IPR023614 Porin domain superfamily AL538_27905 e3243e63fdefda029f4071220b985993 39 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 4.9E-15 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_06135 004520030ea238439dee4fc4f40c7fc5 296 Pfam PF01136 Peptidase family U32 85 238 2.8E-12 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AL538_20240 61b1c4e8b660124df86e6aa183d7e54b 156 SUPERFAMILY SSF56784 4 141 2.07E-22 T 11-10-2018 IPR036412 HAD-like superfamily AL538_20240 61b1c4e8b660124df86e6aa183d7e54b 156 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 130 6.0E-12 T 11-10-2018 AL538_20240 61b1c4e8b660124df86e6aa183d7e54b 156 Gene3D G3DSA:3.40.50.1000 1 154 6.8E-28 T 11-10-2018 IPR023214 HAD superfamily AL538_08290 82413d893fdcaea9d6a3a0a6367ea888 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 1.3E-38 T 11-10-2018 IPR001107 Band 7 domain AL538_27260 3b6089f9a4cc77c77979024936de6a7c 135 Gene3D G3DSA:3.40.5.80 1 57 4.5E-24 T 11-10-2018 AL538_27260 3b6089f9a4cc77c77979024936de6a7c 135 SUPERFAMILY SSF160059 5 59 2.09E-14 T 11-10-2018 AL538_09295 1c0fa3f1e48d32c1b5ce9eaa7a6d8161 151 Pfam PF07681 DoxX 27 108 1.7E-18 T 11-10-2018 IPR032808 DoxX family AL538_16970 1fb62d97eca725218474e35d6f22421d 464 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 51 461 4.0E-110 T 11-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL538_07600 aeaf1f6b0f1acd50ce1012f24e64046b 441 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 3.2E-55 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AL538_05980 3af9ea7aed888b66cdcd56160ff7c90d 405 Gene3D G3DSA:3.40.50.300 152 390 5.6E-42 T 11-10-2018 AL538_05980 3af9ea7aed888b66cdcd56160ff7c90d 405 SUPERFAMILY SSF52540 154 390 2.99E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_05980 3af9ea7aed888b66cdcd56160ff7c90d 405 Pfam PF13614 AAA domain 156 311 2.3E-8 T 11-10-2018 IPR025669 AAA domain AL538_23820 2ed660bffa71614a8a0095592aa30f44 315 Gene3D G3DSA:3.90.930.1 75 240 1.3E-5 T 11-10-2018 AL538_11740 98a2ea73f2599598d17f887bbe8257d2 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 133 7.3E-24 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 AL538_11740 98a2ea73f2599598d17f887bbe8257d2 142 PIRSF PIRSF026426 1 142 3.2E-47 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 AL538_14725 897c9be1d631d978ea1591f4b41a7e2e 331 Gene3D G3DSA:2.40.160.10 21 331 8.7E-21 T 11-10-2018 IPR023614 Porin domain superfamily AL538_14725 897c9be1d631d978ea1591f4b41a7e2e 331 SUPERFAMILY SSF56935 23 331 6.11E-27 T 11-10-2018 AL538_23430 28fae63159ce2c0b472b82b2c74f058c 260 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 64 128 3.1E-10 T 11-10-2018 IPR032871 AHH domain-containing protein AL538_14595 ef5cc4ee7e84acfa2e3be901f8613e69 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 9.2E-46 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AL538_28245 34d462327453dd71e61def24638127b2 99 Pfam PF10795 Protein of unknown function (DUF2607) 5 96 4.4E-26 T 11-10-2018 IPR019731 Protein of unknown function DUF2607 AL538_16235 0e99d5efc46c1b330317c3ba41b82612 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 9.9E-63 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_16235 0e99d5efc46c1b330317c3ba41b82612 458 PIRSF PIRSF006603 9 458 1.3E-66 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_16235 0e99d5efc46c1b330317c3ba41b82612 458 Pfam PF01554 MatE 252 413 2.9E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_16235 0e99d5efc46c1b330317c3ba41b82612 458 Pfam PF01554 MatE 25 185 5.1E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_18060 ed2a8e2970c8ac8fe01a9058838a5211 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.6E-15 T 11-10-2018 IPR012451 Protein of unknown function DUF1656 AL538_16100 ec58325558029bf99ff34e0ee879739e 256 Pfam PF02754 Cysteine-rich domain 121 203 4.7E-8 T 11-10-2018 IPR004017 Cysteine-rich domain AL538_16100 ec58325558029bf99ff34e0ee879739e 256 Pfam PF02754 Cysteine-rich domain 18 85 3.7E-6 T 11-10-2018 IPR004017 Cysteine-rich domain AL538_10760 909bc54143bfef7b92345181c5bb54b1 114 Pfam PF11333 Protein of unknown function (DUF3135) 10 89 5.4E-34 T 11-10-2018 IPR021482 Protein of unknown function DUF3135 AL538_27075 f41d30e8e541e0b7516a6075c586c866 448 Pfam PF07394 Protein of unknown function (DUF1501) 41 417 2.1E-36 T 11-10-2018 IPR010869 Protein of unknown function DUF1501 AL538_25820 028fdd1134f879df190b1dccc8d4ae24 336 Pfam PF10974 Protein of unknown function (DUF2804) 18 335 4.2E-87 T 11-10-2018 IPR021243 Protein of unknown function DUF2804 AL538_18885 864a03b83796368338b8beaa01337d12 341 Pfam PF01757 Acyltransferase family 8 326 2.1E-25 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AL538_06965 d2158532cc69d8b284651822a9221f17 231 Pfam PF04231 Endonuclease I 33 227 4.6E-47 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 AL538_06965 d2158532cc69d8b284651822a9221f17 231 SUPERFAMILY SSF54060 20 228 9.3E-95 T 11-10-2018 AL538_23425 5967ee43a67e53f9f399ca189ef386d1 505 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 7.2E-35 T 11-10-2018 IPR025425 Domain of unknown function DUF4150 AL538_25770 07eeb9ef30415650aefb91f721ebdeb9 213 Pfam PF13645 L,D-transpeptidase catalytic domain 50 211 2.1E-65 T 11-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase AL538_01330 fb07fc8ad0314646d5937be13c0e0761 480 Pfam PF05226 CHASE2 domain 58 352 2.9E-15 T 11-10-2018 IPR007890 CHASE2 AL538_01330 fb07fc8ad0314646d5937be13c0e0761 480 SMART SM01080 58 391 0.0044 T 11-10-2018 IPR007890 CHASE2 AL538_15755 2c912bfbeeae045bfc6b83b757385c33 172 Pfam PF12915 Protein of unknown function (DUF3833) 12 171 5.1E-65 T 11-10-2018 IPR024409 Protein of unknown function DUF3833 AL538_23805 2384fc5b1589a902571add3e54e2829d 84 Pfam PF04973 Nicotinamide mononucleotide transporter 9 78 3.6E-6 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AL538_16835 6b24e8bfb835d9c294071e5cb224f85f 234 SUPERFAMILY SSF49354 29 138 1.72E-7 T 11-10-2018 IPR008962 PapD-like superfamily AL538_10230 9f5c5fe78fb5cafe8108dda6c27d960f 739 Pfam PF05170 AsmA family 1 569 5.9E-136 T 11-10-2018 IPR007844 AsmA AL538_05340 59d3e0c61811ffcfa48f985bcb863420 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 4.2E-134 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 AL538_18050 2cc17daab56a7b544c7cf1191cfa89a8 724 Pfam PF04632 Fusaric acid resistance protein family 6 525 3.5E-42 T 11-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 AL538_27625 37d57cc4edcf1a6b55ba25bc4a147945 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 2.7E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_09155 040b61e8c56dc9831ac118c0547f5df0 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 8.8E-106 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AL538_24125 6ae857ec79f2a09d3de9fcdc8a4dca30 69 SUPERFAMILY SSF50182 18 68 1.2E-15 T 11-10-2018 IPR010920 LSM domain superfamily AL538_24125 6ae857ec79f2a09d3de9fcdc8a4dca30 69 Pfam PF06004 Bacterial protein of unknown function (DUF903) 20 68 1.6E-18 T 11-10-2018 IPR010305 Protein of unknown function DUF903 AL538_24125 6ae857ec79f2a09d3de9fcdc8a4dca30 69 Gene3D G3DSA:2.30.30.100 17 69 5.2E-20 T 11-10-2018 AL538_00490 d1d010da3da9b77a5bd2b85e0216766b 124 Gene3D G3DSA:3.30.1460.10 3 124 1.1E-5 T 11-10-2018 AL538_00490 d1d010da3da9b77a5bd2b85e0216766b 124 SUPERFAMILY SSF69635 10 118 5.57E-7 T 11-10-2018 AL538_00300 043ea0d2af208a2b393779ae764437ce 194 Pfam PF11140 Protein of unknown function (DUF2913) 8 178 6.0E-20 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 AL538_12645 7f8592643a48df0ba98659241e8ca3ff 1157 SUPERFAMILY SSF52540 55 344 1.81E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL538_09340 c61095399545394073872803817b0d26 471 SUPERFAMILY SSF51391 226 447 1.06E-56 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_09340 c61095399545394073872803817b0d26 471 Gene3D G3DSA:3.20.20.70 220 451 1.2E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AL538_09340 c61095399545394073872803817b0d26 471 Pfam PF02581 Thiamine monophosphate synthase 236 429 5.8E-50 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AL538_24345 c5369fe0d398ccb76457aae67dd3668b 93 Pfam PF10115 Transcriptional activator HlyU 2 92 6.4E-40 T 11-10-2018 IPR018772 Transcription activator HlyU AL538_10365 bc3af9b58b10135250dd067f4f984287 463 TIGRFAM TIGR03173 pbuX: xanthine permease 27 446 8.6E-131 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 AL538_10365 bc3af9b58b10135250dd067f4f984287 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 362 382 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL538_10365 bc3af9b58b10135250dd067f4f984287 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 444 4.3E-127 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AL538_10365 bc3af9b58b10135250dd067f4f984287 463 Pfam PF00860 Permease family 22 414 3.6E-98 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 Pfam PF02119 Flagellar P-ring protein 36 377 1.7E-136 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 50 65 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 201 219 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 265 277 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 35 50 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 3.7E-77 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_21065 4ab3afb171824185a24c92df3eadfeb1 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 15 378 36.85 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AL538_24085 da760f565359af894019abd83107ef60 159 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 2.3E-37 T 11-10-2018 IPR009476 Protein of unknown function DUF1097 AL538_13575 5413fc254b1423c14a6bae0c87094a47 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 4.0E-72 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 AL538_00725 640fb9259eaa070963448990e3236351 220 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 4.1E-53 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 AL538_27615 67f615ad3b6f42c54480acee7840f428 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.3E-14 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_26300 5cd67475d5ac0d29a0287be74aefde04 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 2.1E-30 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 AL538_10685 20fdfc959197f9ae32804ae9717154c0 236 Gene3D G3DSA:3.90.550.10 2 236 2.8E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_10685 20fdfc959197f9ae32804ae9717154c0 236 Pfam PF12804 MobA-like NTP transferase domain 5 123 2.5E-10 T 11-10-2018 IPR025877 MobA-like NTP transferase AL538_10685 20fdfc959197f9ae32804ae9717154c0 236 SUPERFAMILY SSF53448 1 235 1.11E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AL538_08305 351521bebf9a2daa07af45ee9dc80c0c 165 Pfam PF02308 MgtC family 19 141 3.2E-29 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_08305 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 9.1E-32 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_08305 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 9.1E-32 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_08305 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 9.1E-32 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_08305 351521bebf9a2daa07af45ee9dc80c0c 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 9.1E-32 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AL538_13440 5db888065ee24994f11bb631420dc5a4 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 3.0E-51 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AL538_13440 5db888065ee24994f11bb631420dc5a4 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AL538_13440 5db888065ee24994f11bb631420dc5a4 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 90 135 2.1E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL538_13440 5db888065ee24994f11bb631420dc5a4 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site AL538_00485 14cbc768ef17fe70c550ef4ea688607c 77 Pfam PF01313 Bacterial export proteins, family 3 3 72 1.8E-8 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AL538_07545 d9f247261967000bb0cd365f8a26dc44 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 94 5.1E-9 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 AL538_07215 4308bf1d77445012026814d3583bb1f9 556 Gene3D G3DSA:4.10.1330.10 37 115 6.0E-6 T 11-10-2018 AL538_05635 ee5fee26a6b30fea8604031a92ee8701 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM AL538_11805 f648fdf41bcc08a8b6e245e28b5b790c 156 PIRSF PIRSF028680 1 156 1.3E-75 T 11-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 AL538_11805 f648fdf41bcc08a8b6e245e28b5b790c 156 SUPERFAMILY SSF56935 44 156 5.86E-6 T 11-10-2018 AL538_16360 412806767622eb083f6fcb11e855790a 337 Gene3D G3DSA:1.10.260.40 1 66 7.1E-9 T 11-10-2018 AL538_16360 412806767622eb083f6fcb11e855790a 337 SUPERFAMILY SSF47413 2 65 1.1E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AL538_00635 addf3472095bce1ac15269a269aeab06 150 Pfam PF11749 Protein of unknown function (DUF3305) 54 140 2.2E-19 T 11-10-2018 IPR021736 Protein of unknown function DUF3305 AL538_05370 f789a481015d1aba43ca6a57023fb532 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 4.2E-40 T 11-10-2018 IPR009698 Protein of unknown function DUF1282 AL538_26365 ce0ddb3800934c79f5496d7f3459f9df 147 SUPERFAMILY SSF55804 1 145 6.41E-36 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_26365 ce0ddb3800934c79f5496d7f3459f9df 147 Gene3D G3DSA:3.40.930.10 1 146 2.5E-48 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AL538_26365 ce0ddb3800934c79f5496d7f3459f9df 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 2.3E-32 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AL538_14050 d1e08bc4c0e70900822a1e3ea38f595b 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 1.2E-31 T 11-10-2018 IPR021675 Protein of unknown function DUF3261 AL538_03530 c55e7d28d02e77cef66d56f405280afb 182 Gene3D G3DSA:3.40.50.850 1 182 3.0E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_03530 c55e7d28d02e77cef66d56f405280afb 182 SUPERFAMILY SSF52499 3 182 3.01E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 AL538_03530 c55e7d28d02e77cef66d56f405280afb 182 Pfam PF00857 Isochorismatase family 9 159 6.4E-28 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 AL538_16875 93ab337b74cda70db5f3c0cd1e9b4d08 258 Pfam PF01925 Sulfite exporter TauE/SafE 10 251 3.7E-38 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_02135 983ddb51ce7a365f4ee67119910d0feb 329 Pfam PF11383 Protein of unknown function (DUF3187) 9 323 6.8E-123 T 11-10-2018 IPR021523 Protein of unknown function DUF3187 AL538_25970 a4efd2444eac5c4e895dd9b5f2643c4f 515 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 60 2.7E-6 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AL538_03260 d3edbe1cc3e5eb677c5fb4b06fb1e971 326 Pfam PF13084 Domain of unknown function (DUF3943) 163 272 5.3E-38 T 11-10-2018 IPR025079 Domain of unknown function DUF3943 AL538_15905 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-24 T 11-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL538_15905 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 11-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE AL538_24315 e92cbca20d625eae85aba0c6e8ba0174 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 291 8.7E-64 T 11-10-2018 IPR032811 Putative conjugal transfer protein TraF-related AL538_24985 5e87dd82e8ac36c850c3141977047ac6 615 Pfam PF01757 Acyltransferase family 5 321 5.1E-30 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AL538_16685 24d6139e9bb114c25071d191083cad7e 437 Pfam PF06629 MltA-interacting protein MipA 45 240 1.3E-22 T 11-10-2018 IPR010583 MltA-interacting MipA AL538_21115 9fc2ab1f73439e73bb6bfe6cbf7bb930 240 Pfam PF03741 Integral membrane protein TerC family 11 198 2.2E-36 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AL538_22750 f801adac26ceeb5a9e7c20180dd2676b 220 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 35 143 6.4E-8 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL538_22750 f801adac26ceeb5a9e7c20180dd2676b 220 SUPERFAMILY SSF49354 22 142 6.25E-12 T 11-10-2018 IPR008962 PapD-like superfamily AL538_16830 692e567469d68c120bad148d4ba184c1 228 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 21 116 3.4E-5 T 11-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AL538_16830 692e567469d68c120bad148d4ba184c1 228 SUPERFAMILY SSF49354 18 123 6.38E-9 T 11-10-2018 IPR008962 PapD-like superfamily AL538_09035 5eaab330a9a39abe853fe425d57175cf 337 Pfam PF01757 Acyltransferase family 7 326 2.9E-29 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AL538_10715 ac05956dae9464c5f0aedb595941d942 404 Pfam PF14897 EpsG family 47 381 9.9E-11 T 11-10-2018 AL538_18265 fd6e9ddd1238fe5016faef36ac45ab56 354 Pfam PF13265 Protein of unknown function (DUF4056) 19 280 3.3E-110 T 11-10-2018 IPR025130 Protein of unknown function DUF4056 AL538_14350 608a26f5373bf56fc04d7d83f4ceba85 310 Pfam PF03601 Conserved hypothetical protein 698 23 291 1.3E-54 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AL538_27850 a939b049f6947c24c302170bddce59f8 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.4E-12 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_14285 d108fcbc4d70de3a638d92cdf8fac5fe 205 SMART SM01144 1 193 1.2E-70 T 11-10-2018 IPR005636 DTW AL538_14285 d108fcbc4d70de3a638d92cdf8fac5fe 205 Pfam PF03942 DTW domain 3 188 1.3E-50 T 11-10-2018 IPR005636 DTW AL538_11045 89e5a8bd011acda3000c059afa97bc3c 233 Pfam PF10986 Protein of unknown function (DUF2796) 142 228 3.7E-21 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 AL538_11045 89e5a8bd011acda3000c059afa97bc3c 233 Pfam PF10986 Protein of unknown function (DUF2796) 28 143 1.6E-31 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 AL538_23135 071e207b6cb9bc62619bf1117a6e171e 132 Pfam PF03899 ATP synthase I chain 16 111 4.0E-6 T 11-10-2018 IPR005598 ATP synthase protein I AL538_08835 ebb1a42535de0a16e8a2222f5eedf5ed 155 Pfam PF13274 Protein of unknown function (DUF4065) 32 122 4.2E-17 T 11-10-2018 IPR025272 Domain of unknown function DUF4065 AL538_08920 ea56627abbeb621cdae45bd41f618fee 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 1.6E-50 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AL538_08920 ea56627abbeb621cdae45bd41f618fee 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 2.0E-58 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 AL538_18435 3747a2968fa22d689d5611b124484708 249 Pfam PF01925 Sulfite exporter TauE/SafE 12 239 6.0E-31 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AL538_00140 b2b0c0b734f8ddca433c6dccdd38bbda 782 Pfam PF16967 E-set like domain 248 313 3.8E-12 T 11-10-2018 IPR032636 Pilus assembly protein, E-set like domain AL538_27550 ba8695f5f38fb526635d506c8ab35bf6 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.4E-9 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_03605 ac712fc45b07d2d88d78a8545f5a7d07 404 Pfam PF12704 MacB-like periplasmic core domain 19 223 5.3E-24 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AL538_03605 ac712fc45b07d2d88d78a8545f5a7d07 404 Pfam PF02687 FtsX-like permease family 305 396 4.6E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_12980 eb2e63729a78ff5fca013254f6ce9d7b 396 Pfam PF07907 YibE/F-like protein 130 368 2.2E-72 T 11-10-2018 IPR012507 YibE/F-like AL538_27785 ad817cba97f0551af8977303488d416d 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 9.2E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_14450 2fe4c321d42d7228d3841dbc0f3e8afc 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 134 7.0E-43 T 11-10-2018 IPR039366 YscW/ExsB AL538_26760 82108f091ee84c8898b8d27c0b9a59c2 170 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 161 9.0E-19 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AL538_12805 447f33d9bfd69a870698c36a8c5743a0 179 Pfam PF11810 Domain of unknown function (DUF3332) 8 175 2.8E-42 T 11-10-2018 IPR021768 Protein of unknown function DUF3332 AL538_17260 b811c7d04aa9aaa1400446b81d0ec8cc 548 Pfam PF13584 Oxygen tolerance 17 455 1.2E-73 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AL538_16965 daddd26ce64f096245c74c266cf269eb 140 Pfam PF04965 Gene 25-like lysozyme 18 112 8.7E-12 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AL538_11430 9836f08af74b63725513f4034544524b 241 Pfam PF16537 Type II secretion system protein B 176 235 5.2E-25 T 11-10-2018 IPR032389 Type II secretion system protein B AL538_04965 53c1142c7d890a8f38aa17f028c8eec1 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 2.7E-19 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL538_04965 53c1142c7d890a8f38aa17f028c8eec1 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 5.8E-17 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AL538_10755 6d3f28c739ceee69c3929172ca1ed402 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 9.6E-21 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL538_27585 d32ac1ce46b38f27a2d879696f7293fa 40 Pfam PF11665 Protein of unknown function (DUF3265) 13 40 1.8E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_22800 a0f0f5767b54e1819486e620015f7fe9 88 Pfam PF03889 Domain of unknown function 22 59 3.3E-22 T 11-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 AL538_05560 7ffd31dbb5a648dc500fefa34d1933e3 241 Pfam PF06629 MltA-interacting protein MipA 28 238 2.8E-30 T 11-10-2018 IPR010583 MltA-interacting MipA AL538_01350 aad206e297c0fa9d0c5b9f4dac7969c4 202 Pfam PF01810 LysE type translocator 17 100 3.7E-8 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_00575 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 11-10-2018 IPR021343 Protein of unknown function DUF2960 AL538_27495 a65b22040fb36139b069af98225f36b3 38 Pfam PF11665 Protein of unknown function (DUF3265) 4 21 1.1E-6 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_21870 a8128e83c6276a618d62d77d390aa2e1 179 Pfam PF06042 Nucleotidyltransferase 20 175 2.5E-59 T 11-10-2018 IPR009267 Putative nucleotidyltransferase AL538_19050 a0c39314c684326ef13065b2eaab634a 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 3.3E-29 T 11-10-2018 IPR021432 Protein of unknown function DUF3081 AL538_23130 44b4880a2a65181f4fca7e52afcb7a97 435 Pfam PF13584 Oxygen tolerance 68 299 3.3E-26 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD AL538_13100 0d6b6ac0a253c6c5456f55b18148dd10 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 1.7E-46 T 11-10-2018 IPR009912 Zinc-ribbon containing domain AL538_11730 de5d0d69640d4e3c9cf47e873b8c0b5c 317 Pfam PF03186 CobD/Cbib protein 19 285 2.2E-28 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AL538_03960 135489f3cf79f424bf3b50b44307145d 696 Pfam PF05170 AsmA family 1 586 5.2E-116 T 11-10-2018 IPR007844 AsmA AL538_27715 42c68e62b53a7f3800bcbb4797abdc56 39 Pfam PF11665 Protein of unknown function (DUF3265) 12 39 1.7E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_27455 28aff4b40447fe5484219559915cd2a4 56 Pfam PF11665 Protein of unknown function (DUF3265) 16 37 1.0E-8 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_03500 61f72b8b23d1dde6ab3598973258f294 489 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 28 241 5.9E-18 T 11-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AL538_14785 1dbbd14b0e619f781850d8a297451ea0 82 Gene3D G3DSA:1.10.1900.30 8 76 3.2E-36 T 11-10-2018 IPR038191 YciN superfamily AL538_14785 1dbbd14b0e619f781850d8a297451ea0 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 2.6E-42 T 11-10-2018 IPR019633 Protein of unknown function DUF2498 AL538_27530 f11c76eff3836cb67b1aa8927b0c7e8d 36 Pfam PF11665 Protein of unknown function (DUF3265) 10 28 1.3E-7 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_16880 1f188fb740264a366f1df7ceca451c45 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 2.9E-141 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane AL538_17400 e2f05f1bc49a988692cbb7ff0ec229c0 279 Pfam PF02361 Cobalt transport protein 17 236 2.6E-32 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component AL538_18725 64f54540ef20f8c07e86e3577f17ef85 194 Pfam PF01810 LysE type translocator 17 188 7.1E-17 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AL538_21815 c1c164629942752014790586de6c195f 130 Pfam PF12614 Ribosome recycling factor 3 128 2.5E-57 T 11-10-2018 IPR022253 Ribosome recycling factor. bacterial AL538_15950 5e457a4d55e9b3dd47da7dd8d095b098 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 7.5E-38 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 AL538_18910 e907750c61efadf4f8e22cdf25d171d9 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 4.5E-30 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT AL538_10650 983e7c75d06d50cff49a2d890af36fac 253 Pfam PF06251 Capsule biosynthesis GfcC 32 246 3.7E-21 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 AL538_07880 3c7e9579cafd528733ea710e6484a9f0 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.6E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AL538_07880 3c7e9579cafd528733ea710e6484a9f0 62 Gene3D G3DSA:1.10.10.1100 1 55 2.1E-18 T 11-10-2018 AL538_25450 13a0266ae193c1f1258420935fe5f25f 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 6.1E-26 T 11-10-2018 IPR022201 Protein of unknown function DUF3726 AL538_18770 61310e75570f1d36fde97b8f8d734f14 122 Pfam PF05656 Protein of unknown function (DUF805) 12 119 3.6E-35 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AL538_15065 c432af15f30dbb497342d4d281a2b13f 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 1.0E-27 T 11-10-2018 IPR009576 Biofilm formation YgiB AL538_12710 3283c7000c4ac3e6bf42c825163f481b 419 Pfam PF11301 Protein of unknown function (DUF3103) 64 417 5.6E-178 T 11-10-2018 IPR021452 Protein of unknown function DUF3103 AL538_13580 59993053ccf8bdebd0f43b83901d57da 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 4.6E-70 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 AL538_05505 25be45dda2ccc63ca12fb0138e25b79d 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 6.0E-133 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 AL538_09490 18582d8323398823aea68590695f641c 270 Pfam PF07070 SpoOM protein 6 221 6.4E-77 T 11-10-2018 IPR009776 Sporulation stage 0, protein M AL538_15890 9bf7062933c810874a0a9a3a3a8f502e 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 6.8E-42 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 AL538_15890 9bf7062933c810874a0a9a3a3a8f502e 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 6.8E-10 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like AL538_18145 6cac36ff412f5eac78d5364f4f6cefc4 71 Pfam PF13783 Domain of unknown function (DUF4177) 6 70 1.0E-9 T 11-10-2018 IPR025234 Protein of unknown function DUF4177 AL538_15750 dc93e94288ff5d627c7a104a5f496ecd 197 SUPERFAMILY SSF54626 83 195 1.7E-5 T 11-10-2018 IPR036298 Chalcone isomerase superfamily GO:0016872 AL538_15750 dc93e94288ff5d627c7a104a5f496ecd 197 Pfam PF16036 Chalcone isomerase-like 57 193 3.6E-7 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 AL538_26190 b3dfae82e82939233d19006988fb89d7 107 Pfam PF11137 Protein of unknown function (DUF2909) 36 100 2.4E-21 T 11-10-2018 IPR021313 Protein of unknown function DUF2909 AL538_14645 ab54c68a451cb2a56667f2e0e4bf34e1 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 9 205 1.4E-9 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 AL538_13595 3304490c3708efde51f17e829f835832 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 6.0E-4 T 11-10-2018 AL538_12585 e50db7c9c864dfffd774b285d6e88265 217 Pfam PF11726 Inovirus Gp2 30 215 2.2E-43 T 11-10-2018 AL538_02730 25fd55c9eaaca77fbe9d8b10355ccad6 160 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 38 153 5.7E-14 T 11-10-2018 IPR018756 Domain of unknown function DUF2314 AL538_05290 c76ffaba1c278e2b0c4aec968fab5917 431 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 6.8E-71 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 AL538_01045 c6a41db51af24834ef2374455123abe2 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 2.8E-20 T 11-10-2018 IPR009305 Protein of unknown function DUF962 AL538_03115 e4c85b232d5899dcadd4cc14813db406 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.7E-26 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AL538_09835 ecbfeaff2ee4d7206bb4bec07a4d4a75 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.0E-27 T 11-10-2018 IPR007475 Membrane fusogenic activity AL538_26240 6bec273ae20ded22305890a123ecbde9 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 1.9E-24 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD AL538_25390 33d745334e4ab37637bc3c99ea5ce781 756 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 387 711 2.1E-144 T 11-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 AL538_15060 78d130df911e27a58c5f7886bdef331e 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 8.0E-13 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AL538_15060 78d130df911e27a58c5f7886bdef331e 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 7.0E-14 T 11-10-2018 IPR007140 Protein of unknown function DUF350 AL538_01580 56791ecf07b27ab2c782fe06084cdcad 265 Pfam PF07681 DoxX 127 214 3.6E-10 T 11-10-2018 IPR032808 DoxX family AL538_11305 7369870c47dab95ad8cf455f69f34892 370 Pfam PF04338 Protein of unknown function, DUF481 153 369 2.8E-39 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AL538_24590 f75088276653db6ba186b43d652a516f 62 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 1.6E-20 T 11-10-2018 IPR021677 Protein of unknown function DUF2986 AL538_03495 729466f4b49c5e924bddd544e01a78c7 130 Pfam PF04138 GtrA-like protein 6 125 9.3E-23 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AL538_28690 50a0c93ca0935e836af2c9df6d9e5b73 51 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 7.1E-23 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 AL538_25040 c63f236b87278a70c05d6f031ab2f554 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 177 8.6E-28 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AL538_04740 1d8d809435afcab8eabd39279392f45e 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 4.1E-5 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AL538_24060 88ed84ffc0c288d7b101985a23cacde6 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 1.4E-27 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 AL538_22070 bbd779c6cbd035149847211f329902db 128 Pfam PF04892 VanZ like family 40 124 6.1E-10 T 11-10-2018 IPR006976 VanZ-like AL538_12765 5c3fe77f81b44135c49208e625621f95 519 Pfam PF03806 AbgT putative transporter family 19 517 6.1E-212 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 AL538_24215 91face86ba2caabec2e5c4dc1228b5d8 805 Pfam PF02687 FtsX-like permease family 716 798 8.4E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AL538_18295 f264b689f9cb99d15e5e86f5d461d46c 155 Pfam PF07670 Nucleoside recognition 31 124 1.0E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AL538_01025 03807cd3779b9f8360d40ba8724e4707 367 SUPERFAMILY SSF56935 30 367 3.36E-24 T 11-10-2018 AL538_01025 03807cd3779b9f8360d40ba8724e4707 367 Gene3D G3DSA:2.40.160.10 66 367 8.8E-10 T 11-10-2018 IPR023614 Porin domain superfamily AL538_01990 485aa08c6a6330f14dc5ee5de4d11245 225 Pfam PF04172 LrgB-like family 6 218 5.6E-71 T 11-10-2018 IPR007300 CidB/LrgB family AL538_27215 4b280f9db9d43a96bbce8a76c08fc945 189 Pfam PF11985 Protein of unknown function (DUF3486) 7 187 6.8E-48 T 11-10-2018 IPR021874 Bacteriophage Mu, Gp27 AL538_27605 8c1eeace5dba86905252550c8d2e57ab 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 6.3E-16 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_02935 c5b24521af56e91ed90f5350fc8a920a 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 2.9E-72 T 11-10-2018 IPR021334 Protein of unknown function DUF2947 AL538_04810 c5545030699b63101ba02f25c73a07ee 163 Pfam PF02674 Colicin V production protein 4 142 1.3E-36 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AL538_25790 949e9fdf02e4999ce9f67391e36c5ab7 225 Pfam PF09335 SNARE associated Golgi protein 55 173 8.0E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein AL538_24280 16ed7b340fae6002332599fbd3abd31e 127 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 2.0E-43 T 11-10-2018 IPR021753 Protein of unknown function DUF3319 AL538_20030 32ae8e671d4cd8e69c55b811db8cedbb 128 Pfam PF10807 Protein of unknown function (DUF2541) 7 115 2.8E-9 T 11-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI AL538_27705 67f5cbd9819fa96d759ab60b4fd60968 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 1.2E-13 T 11-10-2018 IPR021681 Protein of unknown function DUF3265 AL538_15300 b2cfbf07d3f1a9b83e2a788cf653b6df 337 Pfam PF05844 YopD protein 88 334 2.3E-42 T 11-10-2018 IPR008898 YopD-like AL538_05610 49d6bae3887847eb99664f9e90f4a057 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 5.1E-73 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 AL538_15530 44bff991319139a59fbb752e08c266aa 452 Pfam PF01554 MatE 241 402 3.3E-7 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_15530 44bff991319139a59fbb752e08c266aa 452 Pfam PF01554 MatE 16 176 4.4E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AL538_25735 4c9447b445408ea8a0d7d93eb39814eb 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 3.8E-53 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085