locus-tag class description BG259_00010 PF07963 Prokaryotic N-terminal methylation motif BG259_00010 PF08334 Type II secretion system (T2SS), protein G BG259_00015 PF01475 Ferric uptake regulator family BG259_00025 PF00258 Flavodoxin BG259_00035 PF00561 alpha/beta hydrolase fold BG259_00045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG259_00045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG259_00045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG259_00045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG259_00060 PF01784 NIF3 (NGG1p interacting factor 3) BG259_00065 PF00285 Citrate synthase, C-terminal domain BG259_00070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BG259_00075 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BG259_00080 PF00890 FAD binding domain BG259_00080 PF02910 Fumarate reductase flavoprotein C-term BG259_00085 PF13085 2Fe-2S iron-sulfur cluster binding domain BG259_00090 PF16870 2-oxoglutarate dehydrogenase C-terminal BG259_00090 PF00676 Dehydrogenase E1 component BG259_00090 PF02779 Transketolase, pyrimidine binding domain BG259_00090 PF16078 2-oxoglutarate dehydrogenase N-terminus BG259_00095 PF02817 e3 binding domain BG259_00095 PF00364 Biotin-requiring enzyme BG259_00095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG259_00100 PF08442 ATP-grasp domain BG259_00100 PF00549 CoA-ligase BG259_00105 PF00549 CoA-ligase BG259_00105 PF02629 CoA binding domain BG259_00110 PF00950 ABC 3 transport family BG259_00115 PF00005 ABC transporter BG259_00120 PF01297 Zinc-uptake complex component A periplasmic BG259_00125 PF02311 AraC-like ligand binding domain BG259_00125 PF12833 Helix-turn-helix domain BG259_00130 PF04023 FeoA domain BG259_00135 PF02421 Ferrous iron transport protein B BG259_00135 PF07670 Nucleoside recognition BG259_00135 PF17910 FeoB cytosolic helical domain BG259_00135 PF07664 Ferrous iron transport protein B C terminus BG259_00155 PF05746 DALR anticodon binding domain BG259_00155 PF03485 Arginyl tRNA synthetase N terminal domain BG259_00155 PF00750 tRNA synthetases class I (R) BG259_00160 PF06185 YecM protein BG259_00165 PF01842 ACT domain BG259_00165 PF00551 Formyl transferase BG259_00170 PF04851 Type III restriction enzyme, res subunit BG259_00170 PF13307 Helicase C-terminal domain BG259_00175 PF00814 Glycoprotease family BG259_00185 PF03843 Outer membrane lipoprotein Slp family BG259_00190 PF00561 alpha/beta hydrolase fold BG259_00195 PF13193 AMP-binding enzyme C-terminal domain BG259_00195 PF00501 AMP-binding enzyme BG259_00200 PF00570 HRDC domain BG259_00200 PF01612 3'-5' exonuclease BG259_00205 PF03776 Septum formation topological specificity factor MinE BG259_00210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BG259_00215 PF05209 Septum formation inhibitor MinC, N-terminal domain BG259_00215 PF03775 Septum formation inhibitor MinC, C-terminal domain BG259_00220 PF05166 YcgL domain BG259_00225 PF13406 Transglycosylase SLT domain BG259_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_00230 PF03466 LysR substrate binding domain BG259_00235 PF01773 Na+ dependent nucleoside transporter N-terminus BG259_00235 PF07670 Nucleoside recognition BG259_00235 PF07662 Na+ dependent nucleoside transporter C-terminus BG259_00240 PF00145 C-5 cytosine-specific DNA methylase BG259_00250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BG259_00250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BG259_00265 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_00265 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_00275 PF07977 FabA-like domain BG259_00280 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_00280 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_00305 PF00221 Aromatic amino acid lyase BG259_00310 PF00535 Glycosyl transferase family 2 BG259_00315 PF07977 FabA-like domain BG259_00320 PF00501 AMP-binding enzyme BG259_00320 PF13193 AMP-binding enzyme C-terminal domain BG259_00330 PF00550 Phosphopantetheine attachment site BG259_00335 PF00550 Phosphopantetheine attachment site BG259_00360 PF04820 Tryptophan halogenase BG259_00365 PF01209 ubiE/COQ5 methyltransferase family BG259_00370 PF13391 HNH endonuclease BG259_00390 PF00425 chorismate binding enzyme BG259_00395 PF00501 AMP-binding enzyme BG259_00395 PF13193 AMP-binding enzyme C-terminal domain BG259_00400 PF00550 Phosphopantetheine attachment site BG259_00400 PF00857 Isochorismatase family BG259_00405 PF00550 Phosphopantetheine attachment site BG259_00405 PF00975 Thioesterase domain BG259_00405 PF00668 Condensation domain BG259_00405 PF00668 Condensation domain BG259_00405 PF00501 AMP-binding enzyme BG259_00405 PF00501 AMP-binding enzyme BG259_00405 PF13193 AMP-binding enzyme C-terminal domain BG259_00405 PF13193 AMP-binding enzyme C-terminal domain BG259_00405 PF00550 Phosphopantetheine attachment site BG259_00405 PF00975 Thioesterase domain BG259_00420 PF00593 TonB dependent receptor BG259_00420 PF07715 TonB-dependent Receptor Plug Domain BG259_00425 PF01595 Cyclin M transmembrane N-terminal domain BG259_00425 PF03471 Transporter associated domain BG259_00425 PF00571 CBS domain BG259_00430 PF00270 DEAD/DEAH box helicase BG259_00430 PF00271 Helicase conserved C-terminal domain BG259_00435 PF02254 TrkA-N domain BG259_00435 PF02080 TrkA-C domain BG259_00440 PF02386 Cation transport protein BG259_00450 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BG259_00455 PF03480 Bacterial extracellular solute-binding protein, family 7 BG259_00460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BG259_00465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BG259_00475 PF02954 Bacterial regulatory protein, Fis family BG259_00475 PF00072 Response regulator receiver domain BG259_00475 PF00158 Sigma-54 interaction domain BG259_00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_00480 PF00512 His Kinase A (phospho-acceptor) domain BG259_00480 PF02743 Cache domain BG259_00490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_00490 PF05698 Bacterial trigger factor protein (TF) C-terminus BG259_00490 PF05697 Bacterial trigger factor protein (TF) BG259_00495 PF00574 Clp protease BG259_00500 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_00500 PF07724 AAA domain (Cdc48 subfamily) BG259_00500 PF06689 ClpX C4-type zinc finger BG259_00505 PF02190 ATP-dependent protease La (LON) substrate-binding domain BG259_00505 PF00004 ATPase family associated with various cellular activities (AAA) BG259_00505 PF05362 Lon protease (S16) C-terminal proteolytic domain BG259_00510 PF00216 Bacterial DNA-binding protein BG259_00515 PF13145 PPIC-type PPIASE domain BG259_00535 PF01966 HD domain BG259_00535 PF13286 Phosphohydrolase-associated domain BG259_00545 PF00155 Aminotransferase class I and II BG259_00550 PF00425 chorismate binding enzyme BG259_00555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG259_00555 PF16582 Middle domain of thiamine pyrophosphate BG259_00555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG259_00560 PF12697 Alpha/beta hydrolase family BG259_00565 PF00378 Enoyl-CoA hydratase/isomerase BG259_00570 PF13378 Enolase C-terminal domain-like BG259_00575 PF00501 AMP-binding enzyme BG259_00575 PF13193 AMP-binding enzyme C-terminal domain BG259_00580 PF00367 phosphotransferase system, EIIB BG259_00580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG259_00580 PF02378 Phosphotransferase system, EIIC BG259_00585 PF03466 LysR substrate binding domain BG259_00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_00600 PF03601 Conserved hypothetical protein 698 BG259_00605 PF07690 Major Facilitator Superfamily BG259_00650 PF13533 Biotin-lipoyl like BG259_00655 PF00873 AcrB/AcrD/AcrF family BG259_00675 PF00291 Pyridoxal-phosphate dependent enzyme BG259_00680 PF01037 Lrp/AsnC ligand binding domain BG259_00680 PF13404 AsnC-type helix-turn-helix domain BG259_00695 PF09619 Type III secretion system lipoprotein chaperone (YscW) BG259_00700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BG259_00710 PF00990 Diguanylate cyclase, GGDEF domain BG259_00710 PF05230 MASE2 domain BG259_00725 PF00689 Cation transporting ATPase, C-terminus BG259_00725 PF00690 Cation transporter/ATPase, N-terminus BG259_00730 PF08032 RNA 2'-O ribose methyltransferase substrate binding BG259_00730 PF00588 SpoU rRNA Methylase family BG259_00735 PF00037 4Fe-4S binding domain BG259_00735 PF11953 Domain of unknown function (DUF3470) BG259_00745 PF00478 IMP dehydrogenase / GMP reductase domain BG259_00745 PF00571 CBS domain BG259_00750 PF01554 MatE BG259_00755 PF00403 Heavy-metal-associated domain BG259_00760 PF01048 Phosphorylase superfamily BG259_00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_00770 PF00672 HAMP domain BG259_00775 PF01230 HIT domain BG259_00790 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BG259_00790 PF13036 Peptidoglycan-synthase activator LpoB BG259_00800 PF05728 Uncharacterised protein family (UPF0227) BG259_00805 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_00820 PF02559 CarD-like/TRCF domain BG259_00820 PF17757 UvrB interaction domain BG259_00820 PF00270 DEAD/DEAH box helicase BG259_00820 PF00271 Helicase conserved C-terminal domain BG259_00820 PF03461 TRCF domain BG259_00830 PF12704 MacB-like periplasmic core domain BG259_00830 PF02687 FtsX-like permease family BG259_00835 PF00005 ABC transporter BG259_00840 PF02687 FtsX-like permease family BG259_00840 PF12704 MacB-like periplasmic core domain BG259_00850 PF03772 Competence protein BG259_00850 PF00753 Metallo-beta-lactamase superfamily BG259_00855 PF00664 ABC transporter transmembrane region BG259_00855 PF00005 ABC transporter BG259_00860 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BG259_00865 PF03966 Trm112p-like protein BG259_00870 PF02348 Cytidylyltransferase BG259_00875 PF04293 SpoVR like protein BG259_00880 PF04285 Protein of unknown function (DUF444) BG259_00885 PF08298 PrkA AAA domain BG259_00885 PF06798 PrkA serine protein kinase C-terminal domain BG259_00890 PF03887 YfbU domain BG259_00900 PF04055 Radical SAM superfamily BG259_00910 PF02901 Pyruvate formate lyase-like BG259_00910 PF01228 Glycine radical BG259_00925 PF00005 ABC transporter BG259_00930 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_00935 PF00528 Binding-protein-dependent transport system inner membrane component BG259_00940 PF00528 Binding-protein-dependent transport system inner membrane component BG259_00945 PF03372 Endonuclease/Exonuclease/phosphatase family BG259_00950 PF00672 HAMP domain BG259_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_00955 PF10689 Protein of unknown function (DUF2496) BG259_00965 PF01925 Sulfite exporter TauE/SafE BG259_00970 PF13307 Helicase C-terminal domain BG259_00970 PF06733 DEAD_2 BG259_00980 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BG259_00985 PF00849 RNA pseudouridylate synthase BG259_00990 PF03971 Monomeric isocitrate dehydrogenase BG259_00995 PF00313 'Cold-shock' DNA-binding domain BG259_01000 PF02617 ATP-dependent Clp protease adaptor protein ClpS BG259_01005 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_01005 PF17871 AAA lid domain BG259_01005 PF07724 AAA domain (Cdc48 subfamily) BG259_01005 PF00004 ATPase family associated with various cellular activities (AAA) BG259_01005 PF02861 Clp amino terminal domain, pathogenicity island component BG259_01010 PF01176 Translation initiation factor 1A / IF-1 BG259_01015 PF04376 Arginine-tRNA-protein transferase, N terminus BG259_01015 PF04377 Arginine-tRNA-protein transferase, C terminus BG259_01020 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BG259_01030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG259_01035 PF10692 Protein of unknown function (DUF2498) BG259_01040 PF08272 Topoisomerase I zinc-ribbon-like BG259_01040 PF01131 DNA topoisomerase BG259_01040 PF01751 Toprim domain BG259_01040 PF01396 Topoisomerase DNA binding C4 zinc finger BG259_01045 PF00483 Nucleotidyl transferase BG259_01050 PF00534 Glycosyl transferases group 1 BG259_01050 PF08323 Starch synthase catalytic domain BG259_01070 PF04993 TfoX N-terminal domain BG259_01070 PF04994 TfoX C-terminal domain BG259_01075 PF00356 Bacterial regulatory proteins, lacI family BG259_01080 PF02613 Nitrate reductase delta subunit BG259_01085 PF00072 Response regulator receiver domain BG259_01085 PF00486 Transcriptional regulatory protein, C terminal BG259_01090 PF02698 DUF218 domain BG259_01100 PF17192 MukF middle domain BG259_01100 PF17193 MukF C-terminal domain BG259_01100 PF03882 MukF winged-helix domain BG259_01105 PF04288 MukE-like family BG259_01110 PF04310 MukB N-terminal BG259_01110 PF16330 MukB hinge domain BG259_01115 PF18030 RimK PreATP-grasp domain BG259_01115 PF08443 RimK-like ATP-grasp domain BG259_01125 PF08443 RimK-like ATP-grasp domain BG259_01125 PF18030 RimK PreATP-grasp domain BG259_01130 PF08003 Protein of unknown function (DUF1698) BG259_01135 PF13649 Methyltransferase domain BG259_01140 PF01904 Protein of unknown function DUF72 BG259_01145 PF01336 OB-fold nucleic acid binding domain BG259_01145 PF00152 tRNA synthetases class II (D, K and N) BG259_01145 PF02938 GAD domain BG259_01150 PF02075 Crossover junction endodeoxyribonuclease RuvC BG259_01155 PF17200 Single Cache domain 2 BG259_01155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_01155 PF00672 HAMP domain BG259_01160 PF07499 RuvA, C-terminal domain BG259_01160 PF01330 RuvA N terminal domain BG259_01165 PF05496 Holliday junction DNA helicase RuvB P-loop domain BG259_01165 PF05491 RuvB C-terminal winged helix domain BG259_01165 PF17864 RuvB AAA lid domain BG259_01170 PF01654 Cytochrome bd terminal oxidase subunit I BG259_01175 PF02322 Cytochrome bd terminal oxidase subunit II BG259_01180 PF08173 Membrane bound YbgT-like protein BG259_01190 PF03061 Thioesterase superfamily BG259_01195 PF01618 MotA/TolQ/ExbB proton channel family BG259_01200 PF02472 Biopolymer transport protein ExbD/TolR BG259_01210 PF04052 TolB amino-terminal domain BG259_01210 PF07676 WD40-like Beta Propeller Repeat BG259_01215 PF00691 OmpA family BG259_01220 PF16331 TolA binding protein trimerisation BG259_01220 PF13174 Tetratricopeptide repeat BG259_01225 PF01380 SIS domain BG259_01225 PF00571 CBS domain BG259_01230 PF03928 Haem-degrading BG259_01235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_01235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG259_01240 PF00391 PEP-utilising enzyme, mobile domain BG259_01240 PF05524 PEP-utilising enzyme, N-terminal BG259_01240 PF02896 PEP-utilising enzyme, TIM barrel domain BG259_01240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_01240 PF00381 PTS HPr component phosphorylation site BG259_01250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_01260 PF04055 Radical SAM superfamily BG259_01265 PF01370 NAD dependent epimerase/dehydratase family BG259_01270 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG259_01275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_01280 PF12833 Helix-turn-helix domain BG259_01285 PF00465 Iron-containing alcohol dehydrogenase BG259_01290 PF13419 Haloacid dehalogenase-like hydrolase BG259_01295 PF01238 Phosphomannose isomerase type I BG259_01300 PF02445 Quinolinate synthetase A protein BG259_01310 PF03994 Domain of Unknown Function (DUF350) BG259_01320 PF03738 Glutathionylspermidine synthase preATP-grasp BG259_01330 PF00072 Response regulator receiver domain BG259_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_01330 PF00512 His Kinase A (phospho-acceptor) domain BG259_01330 PF09308 LuxQ, periplasmic BG259_01335 PF06610 L-alanine exporter BG259_01360 PF12833 Helix-turn-helix domain BG259_01390 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BG259_01405 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI BG259_01410 PF01514 Secretory protein of YscJ/FliF family BG259_01420 PF02108 Flagellar assembly protein FliH BG259_01455 PF01312 FlhB HrpN YscU SpaS Family BG259_01460 PF01311 Bacterial export proteins, family 1 BG259_01465 PF01313 Bacterial export proteins, family 3 BG259_01470 PF00813 FliP family BG259_01475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG259_01490 PF18269 T3SS EscN ATPase C-terminal domain BG259_01490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_01490 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG259_01495 PF07201 HrpJ-like domain BG259_01500 PF09059 TyeA BG259_01520 PF00771 FHIPEP family BG259_01525 PF09621 Type III secretion system regulator (LcrR) BG259_01540 PF07720 Tetratricopeptide repeat BG259_01550 PF05844 YopD protein BG259_01555 PF13411 MerR HTH family regulatory protein BG259_01560 PF02627 Carboxymuconolactone decarboxylase family BG259_01565 PF02264 LamB porin BG259_01565 PF11471 Maltoporin periplasmic N-terminal extension BG259_01570 PF00356 Bacterial regulatory proteins, lacI family BG259_01575 PF02378 Phosphotransferase system, EIIC BG259_01575 PF00367 phosphotransferase system, EIIB BG259_01580 PF00294 pfkB family carbohydrate kinase BG259_01585 PF08244 Glycosyl hydrolases family 32 C terminal BG259_01585 PF00251 Glycosyl hydrolases family 32 N-terminal domain BG259_01590 PF03831 PhnA domain BG259_01590 PF08274 PhnA Zinc-Ribbon BG259_01600 PF07715 TonB-dependent Receptor Plug Domain BG259_01600 PF00593 TonB dependent receptor BG259_01605 PF13545 Crp-like helix-turn-helix domain BG259_01605 PF00027 Cyclic nucleotide-binding domain BG259_01630 PF01554 MatE BG259_01635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_01635 PF00005 ABC transporter BG259_01640 PF00005 ABC transporter BG259_01640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_01645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_01650 PF00528 Binding-protein-dependent transport system inner membrane component BG259_01660 PF00689 Cation transporting ATPase, C-terminus BG259_01660 PF00690 Cation transporter/ATPase, N-terminus BG259_01670 PF00893 Small Multidrug Resistance protein BG259_01675 PF00893 Small Multidrug Resistance protein BG259_01695 PF02743 Cache domain BG259_01695 PF00672 HAMP domain BG259_01695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_01700 PF03466 LysR substrate binding domain BG259_01705 PF00593 TonB dependent receptor BG259_01705 PF07715 TonB-dependent Receptor Plug Domain BG259_01725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_01725 PF00529 HlyD membrane-fusion protein of T1SS BG259_01730 PF00873 AcrB/AcrD/AcrF family BG259_01740 PF00392 Bacterial regulatory proteins, gntR family BG259_01740 PF07729 FCD domain BG259_01750 PF07687 Peptidase dimerisation domain BG259_01750 PF01546 Peptidase family M20/M25/M40 BG259_01755 PF03606 C4-dicarboxylate anaerobic carrier BG259_01765 PF01557 Fumarylacetoacetate (FAA) hydrolase family BG259_01785 PF00474 Sodium:solute symporter family BG259_01800 PF14579 Helix-hairpin-helix motif BG259_01800 PF02811 PHP domain BG259_01800 PF00929 Exonuclease BG259_01800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG259_01800 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG259_01805 PF00571 CBS domain BG259_01810 PF07729 FCD domain BG259_01810 PF00392 Bacterial regulatory proteins, gntR family BG259_01820 PF07729 FCD domain BG259_01820 PF00392 Bacterial regulatory proteins, gntR family BG259_01830 PF05426 Alginate lyase BG259_01830 PF07940 Heparinase II/III-like protein BG259_01835 PF05426 Alginate lyase BG259_01835 PF07940 Heparinase II/III-like protein BG259_01840 PF07883 Cupin domain BG259_01845 PF00294 pfkB family carbohydrate kinase BG259_01850 PF01081 KDPG and KHG aldolase BG259_01855 PF00474 Sodium:solute symporter family BG259_01870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG259_01870 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG259_01875 PF00141 Peroxidase BG259_01880 PF00579 tRNA synthetases class I (W and Y) BG259_01895 PF03372 Endonuclease/Exonuclease/phosphatase family BG259_01900 PF00672 HAMP domain BG259_01900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_01900 PF02743 Cache domain BG259_01905 PF08453 Peptidase family M9 N-terminal BG259_01905 PF01752 Collagenase BG259_01905 PF04151 Bacterial pre-peptidase C-terminal domain BG259_01920 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BG259_01930 PF03466 LysR substrate binding domain BG259_01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_01940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BG259_01940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BG259_01945 PF01037 Lrp/AsnC ligand binding domain BG259_01950 PF01580 FtsK/SpoIIIE family BG259_01950 PF17854 FtsK alpha domain BG259_01950 PF09397 Ftsk gamma domain BG259_01950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BG259_01955 PF03548 Outer membrane lipoprotein carrier protein LolA BG259_01960 PF16193 AAA C-terminal domain BG259_01960 PF12002 MgsA AAA+ ATPase C terminal BG259_01960 PF00004 ATPase family associated with various cellular activities (AAA) BG259_01965 PF02403 Seryl-tRNA synthetase N-terminal domain BG259_01965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG259_01980 PF01258 Prokaryotic dksA/traR C4-type zinc finger BG259_01985 PF00202 Aminotransferase class-III BG259_01990 PF06968 Biotin and Thiamin Synthesis associated domain BG259_01990 PF04055 Radical SAM superfamily BG259_01995 PF00155 Aminotransferase class I and II BG259_02000 PF08241 Methyltransferase domain BG259_02010 PF01435 Peptidase family M48 BG259_02020 PF00106 short chain dehydrogenase BG259_02045 PF16036 Chalcone isomerase-like BG259_02055 PF08328 Adenylosuccinate lyase C-terminal BG259_02055 PF00206 Lyase BG259_02060 PF04356 Protein of unknown function (DUF489) BG259_02075 PF00294 pfkB family carbohydrate kinase BG259_02080 PF00816 H-NS histone family BG259_02085 PF03553 Na+/H+ antiporter family BG259_02090 PF01634 ATP phosphoribosyltransferase BG259_02090 PF08029 HisG, C-terminal domain BG259_02095 PF00815 Histidinol dehydrogenase BG259_02100 PF00155 Aminotransferase class I and II BG259_02105 PF00475 Imidazoleglycerol-phosphate dehydratase BG259_02105 PF08645 Polynucleotide kinase 3 phosphatase BG259_02110 PF00117 Glutamine amidotransferase class-I BG259_02115 PF00977 Histidine biosynthesis protein BG259_02120 PF00977 Histidine biosynthesis protein BG259_02125 PF01502 Phosphoribosyl-AMP cyclohydrolase BG259_02125 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BG259_02130 PF02810 SEC-C motif BG259_02135 PF00563 EAL domain BG259_02135 PF08668 HDOD domain BG259_02140 PF00149 Calcineurin-like phosphoesterase BG259_02145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BG259_02150 PF09190 DALR domain BG259_02150 PF01406 tRNA synthetases class I (C) catalytic domain BG259_02155 PF00265 Thymidine kinase BG259_02160 PF02698 DUF218 domain BG259_02185 PF01226 Formate/nitrite transporter BG259_02190 PF03649 Uncharacterised protein family (UPF0014) BG259_02195 PF06796 Periplasmic nitrate reductase protein NapE BG259_02200 PF03264 NapC/NirT cytochrome c family, N-terminal region BG259_02205 PF01568 Molydopterin dinucleotide binding domain BG259_02205 PF18364 Molybdopterin oxidoreductase N-terminal domain BG259_02205 PF00384 Molybdopterin oxidoreductase BG259_02210 PF16874 Glycosyl hydrolase family 36 C-terminal domain BG259_02210 PF16875 Glycosyl hydrolase family 36 N-terminal domain BG259_02215 PF01297 Zinc-uptake complex component A periplasmic BG259_02220 PF00005 ABC transporter BG259_02225 PF00950 ABC 3 transport family BG259_02230 PF00950 ABC 3 transport family BG259_02235 PF01368 DHH family BG259_02235 PF02833 DHHA2 domain BG259_02245 PF00005 ABC transporter BG259_02250 PF00005 ABC transporter BG259_02250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_02255 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_02255 PF00528 Binding-protein-dependent transport system inner membrane component BG259_02260 PF00528 Binding-protein-dependent transport system inner membrane component BG259_02265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_02270 PF00158 Sigma-54 interaction domain BG259_02270 PF02954 Bacterial regulatory protein, Fis family BG259_02275 PF04012 PspA/IM30 family BG259_02280 PF06667 Phage shock protein B BG259_02295 PF13533 Biotin-lipoyl like BG259_02300 PF00873 AcrB/AcrD/AcrF family BG259_02305 PF03352 Methyladenine glycosylase BG259_02310 PF03280 Proteobacterial lipase chaperone protein BG259_02315 PF00561 alpha/beta hydrolase fold BG259_02320 PF01053 Cys/Met metabolism PLP-dependent enzyme BG259_02325 PF13396 Phospholipase_D-nuclease N-terminal BG259_02325 PF13091 PLD-like domain BG259_02330 PF00209 Sodium:neurotransmitter symporter family BG259_02335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_02335 PF00672 HAMP domain BG259_02335 PF12729 Four helix bundle sensory module for signal transduction BG259_02340 PF00849 RNA pseudouridylate synthase BG259_02350 PF00175 Oxidoreductase NAD-binding domain BG259_02350 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_02350 PF00970 Oxidoreductase FAD-binding domain BG259_02355 PF03063 Prismane/CO dehydrogenase family BG259_02360 PF00158 Sigma-54 interaction domain BG259_02360 PF01590 GAF domain BG259_02365 PF01066 CDP-alcohol phosphatidyltransferase BG259_02370 PF00005 ABC transporter BG259_02375 PF00528 Binding-protein-dependent transport system inner membrane component BG259_02380 PF13416 Bacterial extracellular solute-binding protein BG259_02385 PF09335 SNARE associated Golgi protein BG259_02395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BG259_02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_02405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_02405 PF00512 His Kinase A (phospho-acceptor) domain BG259_02410 PF00196 Bacterial regulatory proteins, luxR family BG259_02410 PF00072 Response regulator receiver domain BG259_02420 PF01740 STAS domain BG259_02420 PF00916 Sulfate permease family BG259_02430 PF06945 Protein of unknown function (DUF1289) BG259_02440 PF02872 5'-nucleotidase, C-terminal domain BG259_02440 PF00149 Calcineurin-like phosphoesterase BG259_02455 PF01386 Ribosomal L25p family BG259_02460 PF02709 N-terminal domain of galactosyltransferase BG259_02460 PF00535 Glycosyl transferase family 2 BG259_02470 PF16527 Two-component sensor protein CpxA, periplasmic domain BG259_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_02470 PF00512 His Kinase A (phospho-acceptor) domain BG259_02470 PF00672 HAMP domain BG259_02475 PF00486 Transcriptional regulatory protein, C terminal BG259_02475 PF00072 Response regulator receiver domain BG259_02485 PF04851 Type III restriction enzyme, res subunit BG259_02485 PF00271 Helicase conserved C-terminal domain BG259_02490 PF00849 RNA pseudouridylate synthase BG259_02490 PF01479 S4 domain BG259_02495 PF07690 Major Facilitator Superfamily BG259_02505 PF00474 Sodium:solute symporter family BG259_02510 PF16874 Glycosyl hydrolase family 36 C-terminal domain BG259_02510 PF16875 Glycosyl hydrolase family 36 N-terminal domain BG259_02515 PF00356 Bacterial regulatory proteins, lacI family BG259_02520 PF13460 NAD(P)H-binding BG259_02520 PF11066 Protein of unknown function (DUF2867) BG259_02525 PF01554 MatE BG259_02530 PF00005 ABC transporter BG259_02545 PF06965 Na+/H+ antiporter 1 BG259_02550 PF16295 Tetracyclin repressor-like, C-terminal domain BG259_02550 PF00440 Bacterial regulatory proteins, tetR family BG259_02555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG259_02555 PF09317 Domain of unknown function (DUF1974) BG259_02555 PF02770 Acyl-CoA dehydrogenase, middle domain BG259_02555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG259_02560 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BG259_02560 PF12241 Trans-2-enoyl-CoA reductase catalytic region BG259_02560 PF07055 Enoyl reductase FAD binding domain BG259_02565 PF02080 TrkA-C domain BG259_02565 PF06826 Predicted Permease Membrane Region BG259_02570 PF00462 Glutaredoxin BG259_02575 PF00465 Iron-containing alcohol dehydrogenase BG259_02580 PF01380 SIS domain BG259_02580 PF01418 Helix-turn-helix domain, rpiR family BG259_02585 PF00282 Pyridoxal-dependent decarboxylase conserved domain BG259_02595 PF03956 Lysine exporter LysO BG259_02605 PF04993 TfoX N-terminal domain BG259_02605 PF04994 TfoX C-terminal domain BG259_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_02620 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_02620 PF00512 His Kinase A (phospho-acceptor) domain BG259_02630 PF00266 Aminotransferase class-V BG259_02640 PF13426 PAS domain BG259_02640 PF08448 PAS fold BG259_02640 PF08447 PAS fold BG259_02640 PF05231 MASE1 BG259_02640 PF00563 EAL domain BG259_02640 PF00990 Diguanylate cyclase, GGDEF domain BG259_02660 PF03466 LysR substrate binding domain BG259_02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_02665 PF02447 GntP family permease BG259_02670 PF00291 Pyridoxal-phosphate dependent enzyme BG259_02675 PF00664 ABC transporter transmembrane region BG259_02675 PF00005 ABC transporter BG259_02680 PF00664 ABC transporter transmembrane region BG259_02680 PF00005 ABC transporter BG259_02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_02695 PF00266 Aminotransferase class-V BG259_02705 PF08448 PAS fold BG259_02705 PF00990 Diguanylate cyclase, GGDEF domain BG259_02710 PF00939 Sodium:sulfate symporter transmembrane region BG259_02715 PF02698 DUF218 domain BG259_02720 PF00390 Malic enzyme, N-terminal domain BG259_02720 PF03949 Malic enzyme, NAD binding domain BG259_02725 PF00270 DEAD/DEAH box helicase BG259_02725 PF04408 Helicase associated domain (HA2) BG259_02725 PF00271 Helicase conserved C-terminal domain BG259_02725 PF08482 ATP-dependent helicase C-terminal BG259_02740 PF16655 PhoD-like phosphatase, N-terminal domain BG259_02740 PF09423 PhoD-like phosphatase BG259_02770 PF00939 Sodium:sulfate symporter transmembrane region BG259_02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_02775 PF00512 His Kinase A (phospho-acceptor) domain BG259_02775 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_02780 PF00158 Sigma-54 interaction domain BG259_02780 PF02954 Bacterial regulatory protein, Fis family BG259_02780 PF00072 Response regulator receiver domain BG259_02785 PF00563 EAL domain BG259_02785 PF03707 Bacterial signalling protein N terminal repeat BG259_02785 PF00990 Diguanylate cyclase, GGDEF domain BG259_02790 PF01966 HD domain BG259_02790 PF11871 Domain of unknown function (DUF3391) BG259_02795 PF01810 LysE type translocator BG259_02800 PF11230 Protein of unknown function (DUF3029) BG259_02805 PF04055 Radical SAM superfamily BG259_02810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_02810 PF03466 LysR substrate binding domain BG259_02815 PF03741 Integral membrane protein TerC family BG259_02825 PF01966 HD domain BG259_02830 PF00106 short chain dehydrogenase BG259_02835 PF00465 Iron-containing alcohol dehydrogenase BG259_02840 PF03222 Tryptophan/tyrosine permease family BG259_02855 PF00005 ABC transporter BG259_02860 PF01497 Periplasmic binding protein BG259_02865 PF01032 FecCD transport family BG259_02870 PF07715 TonB-dependent Receptor Plug Domain BG259_02870 PF00593 TonB dependent receptor BG259_02885 PF00005 ABC transporter BG259_02885 PF00664 ABC transporter transmembrane region BG259_02890 PF00005 ABC transporter BG259_02890 PF00664 ABC transporter transmembrane region BG259_02895 PF00114 Pilin (bacterial filament) BG259_02895 PF07963 Prokaryotic N-terminal methylation motif BG259_02905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_02905 PF03466 LysR substrate binding domain BG259_02915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_02915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG259_02930 PF00012 Hsp70 protein BG259_02935 PF00012 Hsp70 protein BG259_02945 PF00990 Diguanylate cyclase, GGDEF domain BG259_02975 PF01568 Molydopterin dinucleotide binding domain BG259_02975 PF00384 Molybdopterin oxidoreductase BG259_02975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG259_02980 PF13247 4Fe-4S dicluster domain BG259_02980 PF12800 4Fe-4S binding domain BG259_02985 PF04976 DMSO reductase anchor subunit (DmsC) BG259_02990 PF02613 Nitrate reductase delta subunit BG259_03000 PF02525 Flavodoxin-like fold BG259_03005 PF00271 Helicase conserved C-terminal domain BG259_03005 PF00270 DEAD/DEAH box helicase BG259_03005 PF11898 Domain of unknown function (DUF3418) BG259_03005 PF04408 Helicase associated domain (HA2) BG259_03005 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BG259_03035 PF04204 Homoserine O-succinyltransferase BG259_03050 PF00893 Small Multidrug Resistance protein BG259_03055 PF13520 Amino acid permease BG259_03060 PF01810 LysE type translocator BG259_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_03065 PF03466 LysR substrate binding domain BG259_03070 PF03279 Bacterial lipid A biosynthesis acyltransferase BG259_03090 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BG259_03095 PF00072 Response regulator receiver domain BG259_03095 PF00196 Bacterial regulatory proteins, luxR family BG259_03130 PF01810 LysE type translocator BG259_03145 PF00529 HlyD membrane-fusion protein of T1SS BG259_03145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_03150 PF00873 AcrB/AcrD/AcrF family BG259_03155 PF16868 NMT1-like family BG259_03160 PF01925 Sulfite exporter TauE/SafE BG259_03165 PF01970 Tripartite tricarboxylate transporter TctA family BG259_03185 PF00583 Acetyltransferase (GNAT) family BG259_03200 PF03793 PASTA domain BG259_03200 PF00069 Protein kinase domain BG259_03235 PF17871 AAA lid domain BG259_03235 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_03235 PF07724 AAA domain (Cdc48 subfamily) BG259_03235 PF00004 ATPase family associated with various cellular activities (AAA) BG259_03290 PF04717 Type VI secretion system, phage-baseplate injector BG259_03290 PF16671 Actin cross-linking domain BG259_03310 PF00285 Citrate synthase, C-terminal domain BG259_03315 PF00694 Aconitase C-terminal domain BG259_03315 PF00330 Aconitase family (aconitate hydratase) BG259_03320 PF04303 PrpF protein BG259_03325 PF16177 Acetyl-coenzyme A synthetase N-terminus BG259_03325 PF13193 AMP-binding enzyme C-terminal domain BG259_03325 PF00501 AMP-binding enzyme BG259_03345 PF01544 CorA-like Mg2+ transporter protein BG259_03360 PF04055 Radical SAM superfamily BG259_03365 PF06508 Queuosine biosynthesis protein QueC BG259_03370 PF13185 GAF domain BG259_03370 PF00990 Diguanylate cyclase, GGDEF domain BG259_03380 PF00691 OmpA family BG259_03380 PF05736 OprF membrane domain BG259_03400 PF13322 Domain of unknown function (DUF4092) BG259_03400 PF17291 N-terminal domain of M60-like peptidases BG259_03400 PF13402 Peptidase M60, enhancin and enhancin-like BG259_03410 PF02397 Bacterial sugar transferase BG259_03420 PF00534 Glycosyl transferases group 1 BG259_03420 PF13439 Glycosyltransferase Family 4 BG259_03450 PF00534 Glycosyl transferases group 1 BG259_03460 PF00072 Response regulator receiver domain BG259_03460 PF02954 Bacterial regulatory protein, Fis family BG259_03460 PF00158 Sigma-54 interaction domain BG259_03475 PF02563 Polysaccharide biosynthesis/export protein BG259_03475 PF10531 SLBB domain BG259_03480 PF00691 OmpA family BG259_03485 PF01740 STAS domain BG259_03490 PF14743 DNA ligase OB-like domain BG259_03490 PF01068 ATP dependent DNA ligase domain BG259_03500 PF01554 MatE BG259_03505 PF00677 Lumazine binding domain BG259_03520 PF00072 Response regulator receiver domain BG259_03520 PF01339 CheB methylesterase BG259_03525 PF00990 Diguanylate cyclase, GGDEF domain BG259_03525 PF05230 MASE2 domain BG259_03535 PF00877 NlpC/P60 family BG259_03540 PF00672 HAMP domain BG259_03540 PF12729 Four helix bundle sensory module for signal transduction BG259_03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_03585 PF00480 ROK family BG259_03595 PF03453 MoeA N-terminal region (domain I and II) BG259_03595 PF03454 MoeA C-terminal region (domain IV) BG259_03595 PF00994 Probable molybdopterin binding domain BG259_03600 PF12804 MobA-like NTP transferase domain BG259_03605 PF00005 ABC transporter BG259_03605 PF08402 TOBE domain BG259_03610 PF00528 Binding-protein-dependent transport system inner membrane component BG259_03615 PF12849 PBP superfamily domain BG259_03620 PF00158 Sigma-54 interaction domain BG259_03620 PF02954 Bacterial regulatory protein, Fis family BG259_03620 PF00072 Response regulator receiver domain BG259_03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_03625 PF00512 His Kinase A (phospho-acceptor) domain BG259_03640 PF12848 ABC transporter BG259_03640 PF00005 ABC transporter BG259_03645 PF02634 FdhD/NarQ family BG259_03675 PF01568 Molydopterin dinucleotide binding domain BG259_03675 PF00384 Molybdopterin oxidoreductase BG259_03675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG259_03680 PF13247 4Fe-4S dicluster domain BG259_03700 PF02146 Sir2 family BG259_03710 PF13416 Bacterial extracellular solute-binding protein BG259_03715 PF13416 Bacterial extracellular solute-binding protein BG259_03720 PF00528 Binding-protein-dependent transport system inner membrane component BG259_03725 PF00528 Binding-protein-dependent transport system inner membrane component BG259_03730 PF08402 TOBE domain BG259_03730 PF00005 ABC transporter BG259_03740 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BG259_03750 PF01171 PP-loop family BG259_03755 PF00582 Universal stress protein family BG259_03760 PF13545 Crp-like helix-turn-helix domain BG259_03760 PF00027 Cyclic nucleotide-binding domain BG259_03775 PF00403 Heavy-metal-associated domain BG259_03785 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BG259_03785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG259_03800 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG259_03815 PF09308 LuxQ, periplasmic BG259_03815 PF00072 Response regulator receiver domain BG259_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_03815 PF00512 His Kinase A (phospho-acceptor) domain BG259_03915 PF06303 MatP N-terminal domain BG259_03915 PF17414 MatP C-terminal ribbon-helix-helix domain BG259_03920 PF13654 AAA domain BG259_03920 PF05362 Lon protease (S16) C-terminal proteolytic domain BG259_03925 PF07977 FabA-like domain BG259_03930 PF04957 Ribosome modulation factor BG259_03950 PF01170 Putative RNA methylase family UPF0020 BG259_03950 PF10672 S-adenosylmethionine-dependent methyltransferase BG259_03950 PF02926 THUMP domain BG259_03955 PF07126 Cell-division protein ZapC BG259_03960 PF01180 Dihydroorotate dehydrogenase BG259_03965 PF05088 Bacterial NAD-glutamate dehydrogenase BG259_03975 PF11940 Domain of unknown function (DUF3458) Ig-like fold BG259_03975 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BG259_03975 PF01433 Peptidase family M1 domain BG259_03985 PF00595 PDZ domain BG259_03985 PF17804 Tail specific protease N-terminal domain BG259_03985 PF03572 Peptidase family S41 BG259_03985 PF11818 C-terminal domain of tail specific protease (DUF3340) BG259_03990 PF17516 ProQ C-terminal domain BG259_03990 PF04352 ProQ/FINO family BG259_03995 PF13185 GAF domain BG259_04000 PF00664 ABC transporter transmembrane region BG259_04000 PF00005 ABC transporter BG259_04005 PF04403 Paraquat-inducible protein A BG259_04010 PF02470 MlaD protein BG259_04015 PF01189 16S rRNA methyltransferase RsmB/F BG259_04015 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BG259_04015 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BG259_04035 PF00793 DAHP synthetase I family BG259_04040 PF04461 Protein of unknown function (DUF520) BG259_04045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_04045 PF14824 Sirohaem biosynthesis protein central BG259_04045 PF10414 Sirohaem synthase dimerisation region BG259_04055 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_04060 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04065 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04070 PF00005 ABC transporter BG259_04075 PF01027 Inhibitor of apoptosis-promoting Bax1 BG259_04080 PF04358 DsrC like protein BG259_04085 PF00708 Acylphosphatase BG259_04090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_04090 PF02743 Cache domain BG259_04090 PF00672 HAMP domain BG259_04100 PF17785 PUA-like domain BG259_04100 PF10672 S-adenosylmethionine-dependent methyltransferase BG259_04175 PF05736 OprF membrane domain BG259_04175 PF00691 OmpA family BG259_04180 PF13188 PAS domain BG259_04180 PF00563 EAL domain BG259_04180 PF03707 Bacterial signalling protein N terminal repeat BG259_04180 PF00990 Diguanylate cyclase, GGDEF domain BG259_04185 PF01627 Hpt domain BG259_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_04185 PF00072 Response regulator receiver domain BG259_04185 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BG259_04185 PF00672 HAMP domain BG259_04185 PF00512 His Kinase A (phospho-acceptor) domain BG259_04200 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_04200 PF12464 Maltose acetyltransferase BG259_04210 PF01928 CYTH domain BG259_04225 PF01047 MarR family BG259_04235 PF03729 Short repeat of unknown function (DUF308) BG259_04240 PF00924 Mechanosensitive ion channel BG259_04255 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BG259_04265 PF05736 OprF membrane domain BG259_04265 PF00691 OmpA family BG259_04300 PF00437 Type II/IV secretion system protein BG259_04315 PF04972 BON domain BG259_04315 PF13629 Pilus formation protein N terminal region BG259_04315 PF00263 Bacterial type II and III secretion system protein BG259_04335 PF03466 LysR substrate binding domain BG259_04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_04340 PF12833 Helix-turn-helix domain BG259_04350 PF04151 Bacterial pre-peptidase C-terminal domain BG259_04350 PF01752 Collagenase BG259_04350 PF08453 Peptidase family M9 N-terminal BG259_04360 PF00582 Universal stress protein family BG259_04365 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG259_04365 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BG259_04370 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BG259_04375 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BG259_04375 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BG259_04380 PF12833 Helix-turn-helix domain BG259_04385 PF07715 TonB-dependent Receptor Plug Domain BG259_04385 PF00593 TonB dependent receptor BG259_04390 PF12431 Transcriptional regulator BG259_04390 PF00072 Response regulator receiver domain BG259_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_04395 PF00989 PAS fold BG259_04395 PF17203 Single cache domain 3 BG259_04395 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BG259_04410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_04430 PF03466 LysR substrate binding domain BG259_04435 PF07690 Major Facilitator Superfamily BG259_04445 PF01794 Ferric reductase like transmembrane component BG259_04450 PF00174 Oxidoreductase molybdopterin binding domain BG259_04480 PF07729 FCD domain BG259_04480 PF00392 Bacterial regulatory proteins, gntR family BG259_04485 PF01810 LysE type translocator BG259_04495 PF05368 NmrA-like family BG259_04500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_04500 PF03466 LysR substrate binding domain BG259_04505 PF04151 Bacterial pre-peptidase C-terminal domain BG259_04505 PF05922 Peptidase inhibitor I9 BG259_04505 PF00082 Subtilase family BG259_04510 PF03150 Di-haem cytochrome c peroxidase BG259_04510 PF00034 Cytochrome c BG259_04520 PF13840 ACT domain BG259_04520 PF00696 Amino acid kinase family BG259_04525 PF06339 Ectoine synthase BG259_04530 PF00202 Aminotransferase class-III BG259_04535 PF00583 Acetyltransferase (GNAT) family BG259_04540 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_04550 PF00571 CBS domain BG259_04555 PF01554 MatE BG259_04570 PF00884 Sulfatase BG259_04600 PF01235 Sodium:alanine symporter family BG259_04605 PF00171 Aldehyde dehydrogenase family BG259_04610 PF00158 Sigma-54 interaction domain BG259_04610 PF02954 Bacterial regulatory protein, Fis family BG259_04610 PF01590 GAF domain BG259_04640 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BG259_04645 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BG259_04650 PF04223 Citrate lyase, alpha subunit (CitF) BG259_04655 PF03328 HpcH/HpaI aldolase/citrate lyase family BG259_04660 PF06857 Malonate decarboxylase delta subunit (MdcD) BG259_04665 PF08218 Citrate lyase ligase C-terminal domain BG259_04670 PF03390 2-hydroxycarboxylate transporter family BG259_04675 PF04277 Oxaloacetate decarboxylase, gamma chain BG259_04680 PF02436 Conserved carboxylase domain BG259_04680 PF00364 Biotin-requiring enzyme BG259_04680 PF00682 HMGL-like BG259_04685 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BG259_04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_04690 PF17203 Single cache domain 3 BG259_04695 PF00072 Response regulator receiver domain BG259_04695 PF12431 Transcriptional regulator BG259_04725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_04795 PF14497 Glutathione S-transferase, C-terminal domain BG259_04795 PF02798 Glutathione S-transferase, N-terminal domain BG259_04805 PF04209 homogentisate 1,2-dioxygenase BG259_04810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_04820 PF01546 Peptidase family M20/M25/M40 BG259_04820 PF07687 Peptidase dimerisation domain BG259_04825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_04830 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04835 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_04835 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04840 PF00005 ABC transporter BG259_04840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_04845 PF00005 ABC transporter BG259_04860 PF12561 ToxR activated gene A lipoprotein domain BG259_04860 PF00041 Fibronectin type III domain BG259_04865 PF08453 Peptidase family M9 N-terminal BG259_04865 PF01752 Collagenase BG259_04890 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04895 PF00528 Binding-protein-dependent transport system inner membrane component BG259_04900 PF00005 ABC transporter BG259_04900 PF08402 TOBE domain BG259_04905 PF00701 Dihydrodipicolinate synthetase family BG259_04910 PF02423 Ornithine cyclodeaminase/mu-crystallin family BG259_04920 PF01266 FAD dependent oxidoreductase BG259_04925 PF05544 Proline racemase BG259_04930 PF00171 Aldehyde dehydrogenase family BG259_04935 PF00392 Bacterial regulatory proteins, gntR family BG259_04945 PF00990 Diguanylate cyclase, GGDEF domain BG259_04945 PF00072 Response regulator receiver domain BG259_04950 PF05971 RNA methyltransferase BG259_04955 PF01863 Protein of unknown function DUF45 BG259_04960 PF08334 Type II secretion system (T2SS), protein G BG259_04960 PF07963 Prokaryotic N-terminal methylation motif BG259_04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_04985 PF03466 LysR substrate binding domain BG259_04990 PF07690 Major Facilitator Superfamily BG259_05040 PF00005 ABC transporter BG259_05045 PF01032 FecCD transport family BG259_05050 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BG259_05060 PF00300 Histidine phosphatase superfamily (branch 1) BG259_05065 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BG259_05070 PF02654 Cobalamin-5-phosphate synthase BG259_05075 PF02277 Phosphoribosyltransferase BG259_05080 PF01613 Flavin reductase like domain BG259_05085 PF13460 NAD(P)H-binding BG259_05100 PF00929 Exonuclease BG259_05100 PF08411 Exonuclease C-terminal BG259_05105 PF03788 LrgA family BG259_05110 PF04172 LrgB-like family BG259_05115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG259_05115 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BG259_05120 PF02222 ATP-grasp domain BG259_05125 PF05724 Thiopurine S-methyltransferase (TPMT) BG259_05135 PF00216 Bacterial DNA-binding protein BG259_05175 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BG259_05175 PF03484 tRNA synthetase B5 domain BG259_05175 PF01588 Putative tRNA binding domain BG259_05175 PF03483 B3/4 domain BG259_05175 PF03147 Ferredoxin-fold anticodon binding domain BG259_05180 PF01409 tRNA synthetases class II core domain (F) BG259_05180 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BG259_05185 PF00072 Response regulator receiver domain BG259_05185 PF00990 Diguanylate cyclase, GGDEF domain BG259_05220 PF01906 Putative heavy-metal-binding BG259_05225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_05230 PF01042 Endoribonuclease L-PSP BG259_05235 PF00453 Ribosomal protein L20 BG259_05240 PF01632 Ribosomal protein L35 BG259_05245 PF05198 Translation initiation factor IF-3, N-terminal domain BG259_05245 PF00707 Translation initiation factor IF-3, C-terminal domain BG259_05250 PF02824 TGS domain BG259_05250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG259_05250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG259_05250 PF03129 Anticodon binding domain BG259_05265 PF07702 UTRA domain BG259_05265 PF00392 Bacterial regulatory proteins, gntR family BG259_05270 PF01979 Amidohydrolase family BG259_05275 PF00491 Arginase family BG259_05280 PF17391 Urocanase N-terminal domain BG259_05280 PF17392 Urocanase C-terminal domain BG259_05280 PF01175 Urocanase Rossmann-like domain BG259_05285 PF00221 Aromatic amino acid lyase BG259_05305 PF01565 FAD binding domain BG259_05305 PF13183 4Fe-4S dicluster domain BG259_05305 PF02913 FAD linked oxidases, C-terminal domain BG259_05320 PF00691 OmpA family BG259_05320 PF05736 OprF membrane domain BG259_05340 PF01259 SAICAR synthetase BG259_05475 PF03575 Peptidase family S51 BG259_05580 PF08378 Nuclease-related domain BG259_05585 PF13419 Haloacid dehalogenase-like hydrolase BG259_05605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG259_05605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_05765 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BG259_05785 PF13614 AAA domain BG259_06085 PF00877 NlpC/P60 family BG259_06190 PF00589 Phage integrase family BG259_06190 PF13495 Phage integrase, N-terminal SAM-like domain BG259_06205 PF13302 Acetyltransferase (GNAT) domain BG259_06210 PF00158 Sigma-54 interaction domain BG259_06210 PF18024 Helix-turn-helix domain BG259_06215 PF05128 Domain of unknown function (DUF697) BG259_06220 PF04317 YcjX-like family, DUF463 BG259_06235 PF04715 Anthranilate synthase component I, N terminal region BG259_06235 PF00425 chorismate binding enzyme BG259_06240 PF00072 Response regulator receiver domain BG259_06240 PF09308 LuxQ, periplasmic BG259_06240 PF00512 His Kinase A (phospho-acceptor) domain BG259_06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_06250 PF00293 NUDIX domain BG259_06255 PF03222 Tryptophan/tyrosine permease family BG259_06260 PF03313 Serine dehydratase alpha chain BG259_06260 PF03315 Serine dehydratase beta chain BG259_06265 PF00990 Diguanylate cyclase, GGDEF domain BG259_06265 PF03707 Bacterial signalling protein N terminal repeat BG259_06265 PF13188 PAS domain BG259_06265 PF00563 EAL domain BG259_06275 PF00196 Bacterial regulatory proteins, luxR family BG259_06275 PF00072 Response regulator receiver domain BG259_06280 PF01242 6-pyruvoyl tetrahydropterin synthase BG259_06285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_06285 PF17200 Single Cache domain 2 BG259_06285 PF00672 HAMP domain BG259_06290 PF01336 OB-fold nucleic acid binding domain BG259_06290 PF00152 tRNA synthetases class II (D, K and N) BG259_06305 PF00155 Aminotransferase class I and II BG259_06305 PF00392 Bacterial regulatory proteins, gntR family BG259_06320 PF00672 HAMP domain BG259_06320 PF01966 HD domain BG259_06325 PF00155 Aminotransferase class I and II BG259_06345 PF00672 HAMP domain BG259_06345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_06350 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_06355 PF01047 MarR family BG259_06360 PF00196 Bacterial regulatory proteins, luxR family BG259_06360 PF00072 Response regulator receiver domain BG259_06365 PF07730 Histidine kinase BG259_06365 PF17200 Single Cache domain 2 BG259_06370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BG259_06380 PF03480 Bacterial extracellular solute-binding protein, family 7 BG259_06395 PF00753 Metallo-beta-lactamase superfamily BG259_06400 PF05951 Bacterial protein of unknown function (DUF882) BG259_06405 PF03734 L,D-transpeptidase catalytic domain BG259_06405 PF01471 Putative peptidoglycan binding domain BG259_06430 PF00925 GTP cyclohydrolase II BG259_06440 PF03918 Cytochrome C biogenesis protein BG259_06445 PF08534 Redoxin BG259_06450 PF01578 Cytochrome C assembly protein BG259_06450 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BG259_06455 PF03916 Polysulphide reductase, NrfD BG259_06460 PF13247 4Fe-4S dicluster domain BG259_06470 PF02335 Cytochrome c552 BG259_06485 PF00521 DNA gyrase/topoisomerase IV, subunit A BG259_06485 PF03989 DNA gyrase C-terminal domain, beta-propeller BG259_06500 PF03477 ATP cone domain BG259_06500 PF02867 Ribonucleotide reductase, barrel domain BG259_06500 PF00317 Ribonucleotide reductase, all-alpha domain BG259_06505 PF00268 Ribonucleotide reductase, small chain BG259_06515 PF00994 Probable molybdopterin binding domain BG259_06530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BG259_06535 PF16653 Saccharopine dehydrogenase C-terminal domain BG259_06535 PF03435 Saccharopine dehydrogenase NADP binding domain BG259_06540 PF00202 Aminotransferase class-III BG259_06575 PF01066 CDP-alcohol phosphatidyltransferase BG259_06580 PF01541 GIY-YIG catalytic domain BG259_06580 PF02151 UvrB/uvrC motif BG259_06580 PF08459 UvrC Helix-hairpin-helix N-terminal BG259_06585 PF00072 Response regulator receiver domain BG259_06585 PF00196 Bacterial regulatory proteins, luxR family BG259_06590 PF03104 DNA polymerase family B, exonuclease domain BG259_06590 PF00136 DNA polymerase family B BG259_06600 PF09285 Elongation factor P, C-terminal BG259_06600 PF08207 Elongation factor P (EF-P) KOW-like domain BG259_06600 PF01132 Elongation factor P (EF-P) OB domain BG259_06605 PF04269 Protein of unknown function, DUF440 BG259_06610 PF01479 S4 domain BG259_06610 PF00849 RNA pseudouridylate synthase BG259_06620 PF01300 Telomere recombination BG259_06625 PF02811 PHP domain BG259_06630 PF08056 Tryptophan operon leader peptide BG259_06635 PF04715 Anthranilate synthase component I, N terminal region BG259_06635 PF00425 chorismate binding enzyme BG259_06640 PF00117 Glutamine amidotransferase class-I BG259_06645 PF02885 Glycosyl transferase family, helical bundle domain BG259_06645 PF00591 Glycosyl transferase family, a/b domain BG259_06650 PF00218 Indole-3-glycerol phosphate synthase BG259_06650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BG259_06655 PF00291 Pyridoxal-phosphate dependent enzyme BG259_06660 PF00290 Tryptophan synthase alpha chain BG259_06665 PF00375 Sodium:dicarboxylate symporter family BG259_06670 PF17327 Acyl homoserine lactone synthase BG259_06675 PF00072 Response regulator receiver domain BG259_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_06685 PF04279 Intracellular septation protein A BG259_06690 PF03061 Thioesterase superfamily BG259_06695 PF03795 YCII-related domain BG259_06710 PF03466 LysR substrate binding domain BG259_06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_06725 PF00498 FHA domain BG259_06725 PF00563 EAL domain BG259_06725 PF00990 Diguanylate cyclase, GGDEF domain BG259_06730 PF11842 Domain of unknown function (DUF3362) BG259_06730 PF04055 Radical SAM superfamily BG259_06730 PF08497 Radical SAM N-terminal BG259_06735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_06735 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_06740 PF00375 Sodium:dicarboxylate symporter family BG259_06745 PF01042 Endoribonuclease L-PSP BG259_06750 PF08348 YheO-like PAS domain BG259_06750 PF13309 HTH domain BG259_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_06755 PF00672 HAMP domain BG259_06765 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BG259_06770 PF00535 Glycosyl transferase family 2 BG259_06775 PF00486 Transcriptional regulatory protein, C terminal BG259_06775 PF00072 Response regulator receiver domain BG259_06780 PF00512 His Kinase A (phospho-acceptor) domain BG259_06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_06780 PF00672 HAMP domain BG259_06800 PF03466 LysR substrate binding domain BG259_06800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_06805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_06805 PF00529 HlyD membrane-fusion protein of T1SS BG259_06815 PF01047 MarR family BG259_06830 PF08267 Cobalamin-independent synthase, N-terminal domain BG259_06830 PF01717 Cobalamin-independent synthase, Catalytic domain BG259_06860 PF02687 FtsX-like permease family BG259_06860 PF00005 ABC transporter BG259_06860 PF12704 MacB-like periplasmic core domain BG259_06865 PF02687 FtsX-like permease family BG259_06865 PF12704 MacB-like periplasmic core domain BG259_06865 PF00005 ABC transporter BG259_06870 PF12704 MacB-like periplasmic core domain BG259_06870 PF02687 FtsX-like permease family BG259_06890 PF00440 Bacterial regulatory proteins, tetR family BG259_06895 PF00583 Acetyltransferase (GNAT) family BG259_06920 PF00085 Thioredoxin BG259_06925 PF02683 Cytochrome C biogenesis protein transmembrane region BG259_06925 PF11412 Disulphide bond corrector protein DsbC BG259_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_06935 PF03466 LysR substrate binding domain BG259_06940 PF04403 Paraquat-inducible protein A BG259_06945 PF02470 MlaD protein BG259_06950 PF03886 ABC-type transport auxiliary lipoprotein component BG259_07005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_07010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG259_07015 PF18073 Rubredoxin metal binding domain BG259_07020 PF06305 Lipopolysaccharide assembly protein A domain BG259_07025 PF00216 Bacterial DNA-binding protein BG259_07030 PF00575 S1 RNA binding domain BG259_07035 PF02224 Cytidylate kinase BG259_07040 PF01343 Peptidase family S49 BG259_07040 PF08496 Peptidase family S49 N-terminal BG259_07045 PF00106 short chain dehydrogenase BG259_07060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG259_07060 PF02811 PHP domain BG259_07060 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG259_07060 PF14579 Helix-hairpin-helix motif BG259_07060 PF01336 OB-fold nucleic acid binding domain BG259_07065 PF01584 CheW-like domain BG259_07065 PF00072 Response regulator receiver domain BG259_07070 PF00480 ROK family BG259_07075 PF02887 Pyruvate kinase, alpha/beta domain BG259_07075 PF00224 Pyruvate kinase, barrel domain BG259_07080 PF01734 Patatin-like phospholipase BG259_07090 PF00209 Sodium:neurotransmitter symporter family BG259_07100 PF00367 phosphotransferase system, EIIB BG259_07100 PF02378 Phosphotransferase system, EIIC BG259_07105 PF01026 TatD related DNase BG259_07110 PF09115 DNA polymerase III, delta subunit, C terminal BG259_07115 PF02223 Thymidylate kinase BG259_07120 PF02618 YceG-like family BG259_07125 PF01063 Amino-transferase class IV BG259_07130 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_07130 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_07135 PF00550 Phosphopantetheine attachment site BG259_07145 PF00698 Acyl transferase domain BG259_07150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG259_07150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG259_07155 PF02504 Fatty acid synthesis protein BG259_07160 PF01783 Ribosomal L32p protein family BG259_07165 PF02620 Large ribosomal RNA subunit accumulation protein YceD BG259_07170 PF02545 Maf-like protein BG259_07175 PF00849 RNA pseudouridylate synthase BG259_07175 PF01479 S4 domain BG259_07180 PF12111 Polyribonucleotide phosphorylase C terminal BG259_07180 PF10150 Ribonuclease E/G family BG259_07180 PF00575 S1 RNA binding domain BG259_07190 PF01740 STAS domain BG259_07190 PF00916 Sulfate permease family BG259_07195 PF01451 Low molecular weight phosphotyrosine protein phosphatase BG259_07200 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BG259_07200 PF12557 Cob(I)alamin adenosyltransferase N terminal BG259_07210 PF00485 Phosphoribulokinase / Uridine kinase family BG259_07215 PF10609 NUBPL iron-transfer P-loop NTPase BG259_07220 PF09334 tRNA synthetases class I (M) BG259_07220 PF01588 Putative tRNA binding domain BG259_07230 PF00392 Bacterial regulatory proteins, gntR family BG259_07230 PF07840 FadR C-terminal domain BG259_07235 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BG259_07240 PF02600 Disulfide bond formation protein DsbB BG259_07245 PF07516 SecA Wing and Scaffold domain BG259_07245 PF02810 SEC-C motif BG259_07245 PF01043 SecA preprotein cross-linking domain BG259_07245 PF07517 SecA DEAD-like domain BG259_07250 PF01207 Dihydrouridine synthase (Dus) BG259_07255 PF00990 Diguanylate cyclase, GGDEF domain BG259_07260 PF02903 Alpha amylase, N-terminal ig-like domain BG259_07260 PF00128 Alpha amylase, catalytic domain BG259_07265 PF00005 ABC transporter BG259_07270 PF02653 Branched-chain amino acid transport system / permease component BG259_07285 PF04217 Protein of unknown function, DUF412 BG259_07290 PF00871 Acetokinase family BG259_07295 PF07085 DRTGG domain BG259_07295 PF01515 Phosphate acetyl/butaryl transferase BG259_07300 PF13194 Domain of unknown function (DUF4010) BG259_07305 PF13409 Glutathione S-transferase, N-terminal domain BG259_07310 PF00005 ABC transporter BG259_07310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_07315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_07315 PF00005 ABC transporter BG259_07320 PF00528 Binding-protein-dependent transport system inner membrane component BG259_07320 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_07325 PF00528 Binding-protein-dependent transport system inner membrane component BG259_07330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_07335 PF02391 MoaE protein BG259_07340 PF02597 ThiS family BG259_07345 PF01967 MoaC family BG259_07350 PF00994 Probable molybdopterin binding domain BG259_07355 PF04055 Radical SAM superfamily BG259_07355 PF06463 Molybdenum Cofactor Synthesis C BG259_07360 PF01933 Uncharacterised protein family UPF0052 BG259_07365 PF01627 Hpt domain BG259_07370 PF00158 Sigma-54 interaction domain BG259_07370 PF00072 Response regulator receiver domain BG259_07370 PF02954 Bacterial regulatory protein, Fis family BG259_07375 PF17757 UvrB interaction domain BG259_07375 PF12344 Ultra-violet resistance protein B BG259_07375 PF02151 UvrB/uvrC motif BG259_07375 PF04851 Type III restriction enzyme, res subunit BG259_07375 PF00271 Helicase conserved C-terminal domain BG259_07385 PF01228 Glycine radical BG259_07385 PF02901 Pyruvate formate lyase-like BG259_07390 PF02508 Rnf-Nqr subunit, membrane protein BG259_07395 PF04060 Putative Fe-S cluster BG259_07400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BG259_07400 PF12838 4Fe-4S dicluster domain BG259_07400 PF13375 RnfC Barrel sandwich hybrid domain BG259_07400 PF10531 SLBB domain BG259_07405 PF03116 NQR2, RnfD, RnfE family BG259_07410 PF04205 FMN-binding domain BG259_07415 PF02508 Rnf-Nqr subunit, membrane protein BG259_07420 PF10576 Iron-sulfur binding domain of endonuclease III BG259_07420 PF00633 Helix-hairpin-helix motif BG259_07420 PF00730 HhH-GPD superfamily base excision DNA repair protein BG259_07425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_07430 PF10952 Protein of unknown function (DUF2753) BG259_07435 PF00691 OmpA family BG259_07435 PF18393 MotY N-terminal domain BG259_07440 PF00929 Exonuclease BG259_07445 PF03553 Na+/H+ antiporter family BG259_07445 PF13726 Na+-H+ antiporter family BG259_07480 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BG259_07500 PF04335 VirB8 protein BG259_07505 PF03524 Conjugal transfer protein BG259_07510 PF03743 Bacterial conjugation TrbI-like protein BG259_07515 PF00437 Type II/IV secretion system protein BG259_07520 PF02534 Type IV secretory system Conjugative DNA transfer BG259_07545 PF03432 Relaxase/Mobilisation nuclease domain BG259_07545 PF18821 Large polyvalent protein-associated domain 7 BG259_07620 PF00145 C-5 cytosine-specific DNA methylase BG259_07625 PF00589 Phage integrase family BG259_07625 PF02899 Phage integrase, N-terminal SAM-like domain BG259_07630 PF00462 Glutaredoxin BG259_07635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BG259_07635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BG259_07650 PF00465 Iron-containing alcohol dehydrogenase BG259_07650 PF00171 Aldehyde dehydrogenase family BG259_07655 PF01914 MarC family integral membrane protein BG259_07660 PF00027 Cyclic nucleotide-binding domain BG259_07660 PF00520 Ion transport protein BG259_07665 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG259_07665 PF02774 Semialdehyde dehydrogenase, dimerisation domain BG259_07670 PF03553 Na+/H+ antiporter family BG259_07685 PF04245 37-kD nucleoid-associated bacterial protein BG259_07690 PF07208 Protein of unknown function (DUF1414) BG259_07695 PF11893 Domain of unknown function (DUF3413) BG259_07695 PF00884 Sulfatase BG259_07705 PF00850 Histone deacetylase domain BG259_07710 PF00106 short chain dehydrogenase BG259_07720 PF01131 DNA topoisomerase BG259_07720 PF01751 Toprim domain BG259_07725 PF00881 Nitroreductase family BG259_07730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG259_07730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_07735 PF01343 Peptidase family S49 BG259_07740 PF17763 Glutaminase/Asparaginase C-terminal domain BG259_07740 PF00710 Asparaginase, N-terminal BG259_07745 PF07023 Protein of unknown function (DUF1315) BG259_07755 PF01641 SelR domain BG259_07760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG259_07760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG259_07765 PF01263 Aldose 1-epimerase BG259_07770 PF01156 Inosine-uridine preferring nucleoside hydrolase BG259_07775 PF13426 PAS domain BG259_07775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_07775 PF08447 PAS fold BG259_07780 PF13847 Methyltransferase domain BG259_07795 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_07800 PF00245 Alkaline phosphatase BG259_07810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_07815 PF03992 Antibiotic biosynthesis monooxygenase BG259_07820 PF00924 Mechanosensitive ion channel BG259_07820 PF05552 Conserved TM helix BG259_07825 PF04226 Transglycosylase associated protein BG259_07835 PF03692 Putative zinc- or iron-chelating domain BG259_07840 PF03692 Putative zinc- or iron-chelating domain BG259_07845 PF13309 HTH domain BG259_07845 PF08348 YheO-like PAS domain BG259_07850 PF03313 Serine dehydratase alpha chain BG259_07855 PF01042 Endoribonuclease L-PSP BG259_07865 PF00230 Major intrinsic protein BG259_07870 PF02132 RecR protein BG259_07870 PF13662 Toprim domain BG259_07875 PF02575 YbaB/EbfC DNA-binding family BG259_07880 PF12170 DNA polymerase III tau subunit V interacting with alpha BG259_07880 PF12169 DNA polymerase III subunits gamma and tau domain III BG259_07885 PF00156 Phosphoribosyl transferase domain BG259_07890 PF04304 Protein of unknown function (DUF454) BG259_07895 PF00072 Response regulator receiver domain BG259_07900 PF03466 LysR substrate binding domain BG259_07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_07905 PF00156 Phosphoribosyl transferase domain BG259_07910 PF02674 Colicin V production protein BG259_07915 PF05036 Sporulation related domain BG259_07920 PF08245 Mur ligase middle domain BG259_07920 PF02875 Mur ligase family, glutamate ligase domain BG259_07925 PF01039 Carboxyl transferase domain BG259_07925 PF17848 Acetyl-coA carboxylase zinc finger domain BG259_07935 PF01416 tRNA pseudouridine synthase BG259_07945 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG259_07945 PF02774 Semialdehyde dehydrogenase, dimerisation domain BG259_07950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG259_07950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_07950 PF11890 Domain of unknown function (DUF3410) BG259_07960 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_07960 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_07965 PF01266 FAD dependent oxidoreductase BG259_07965 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BG259_07975 PF08891 YfcL protein BG259_07980 PF04315 Elongation factor P hydroxylase BG259_07985 PF03458 UPF0126 domain BG259_07990 PF01264 Chorismate synthase BG259_07995 PF05175 Methyltransferase small domain BG259_08000 PF01713 Smr domain BG259_08005 PF00300 Histidine phosphatase superfamily (branch 1) BG259_08010 PF16187 Middle or third domain of peptidase_M16 BG259_08010 PF00675 Insulinase (Peptidase family M16) BG259_08010 PF05193 Peptidase M16 inactive domain BG259_08020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG259_08020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG259_08020 PF00378 Enoyl-CoA hydratase/isomerase BG259_08025 PF02803 Thiolase, C-terminal domain BG259_08025 PF00108 Thiolase, N-terminal domain BG259_08030 PF08281 Sigma-70, region 4 BG259_08030 PF04542 Sigma-70 region 2 BG259_08040 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BG259_08045 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BG259_08050 PF04333 MlaA lipoprotein BG259_08055 PF03918 Cytochrome C biogenesis protein BG259_08060 PF03918 Cytochrome C biogenesis protein BG259_08065 PF08534 Redoxin BG259_08070 PF01578 Cytochrome C assembly protein BG259_08070 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BG259_08075 PF03100 CcmE BG259_08085 PF01578 Cytochrome C assembly protein BG259_08090 PF03379 CcmB protein BG259_08095 PF00005 ABC transporter BG259_08105 PF01584 CheW-like domain BG259_08115 PF13614 AAA domain BG259_08120 PF01339 CheB methylesterase BG259_08120 PF00072 Response regulator receiver domain BG259_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_08125 PF01584 CheW-like domain BG259_08125 PF02895 Signal transducing histidine kinase, homodimeric domain BG259_08125 PF07194 P2 response regulator binding domain BG259_08125 PF01627 Hpt domain BG259_08130 PF04344 Chemotaxis phosphatase, CheZ BG259_08135 PF00072 Response regulator receiver domain BG259_08140 PF04539 Sigma-70 region 3 BG259_08140 PF04545 Sigma-70, region 4 BG259_08140 PF04542 Sigma-70 region 2 BG259_08145 PF10609 NUBPL iron-transfer P-loop NTPase BG259_08150 PF00448 SRP54-type protein, GTPase domain BG259_08155 PF00771 FHIPEP family BG259_08160 PF01312 FlhB HrpN YscU SpaS Family BG259_08165 PF01311 Bacterial export proteins, family 1 BG259_08170 PF01313 Bacterial export proteins, family 3 BG259_08175 PF00813 FliP family BG259_08180 PF04347 Flagellar biosynthesis protein, FliO BG259_08185 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG259_08190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG259_08190 PF02154 Flagellar motor switch protein FliM BG259_08215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_08215 PF18269 T3SS EscN ATPase C-terminal domain BG259_08225 PF14842 FliG N-terminal domain BG259_08225 PF14841 FliG middle domain BG259_08225 PF01706 FliG C-terminal domain BG259_08230 PF01514 Secretory protein of YscJ/FliF family BG259_08230 PF08345 Flagellar M-ring protein C-terminal BG259_08235 PF02049 Flagellar hook-basal body complex protein FliE BG259_08240 PF02954 Bacterial regulatory protein, Fis family BG259_08240 PF00158 Sigma-54 interaction domain BG259_08240 PF00072 Response regulator receiver domain BG259_08245 PF00512 His Kinase A (phospho-acceptor) domain BG259_08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_08250 PF00158 Sigma-54 interaction domain BG259_08250 PF00072 Response regulator receiver domain BG259_08250 PF02954 Bacterial regulatory protein, Fis family BG259_08255 PF02561 Flagellar protein FliS BG259_08265 PF07196 Flagellin hook IN motif BG259_08265 PF07195 Flagellar hook-associated protein 2 C-terminus BG259_08265 PF02465 Flagellar hook-associated protein 2 N-terminus BG259_08270 PF03646 FlaG protein BG259_08275 PF07196 Flagellin hook IN motif BG259_08275 PF00669 Bacterial flagellin N-terminal helical region BG259_08275 PF00700 Bacterial flagellin C-terminal helical region BG259_08280 PF00669 Bacterial flagellin N-terminal helical region BG259_08280 PF07196 Flagellin hook IN motif BG259_08280 PF00700 Bacterial flagellin C-terminal helical region BG259_08290 PF00669 Bacterial flagellin N-terminal helical region BG259_08290 PF07196 Flagellin hook IN motif BG259_08290 PF00700 Bacterial flagellin C-terminal helical region BG259_08300 PF02056 Family 4 glycosyl hydrolase BG259_08300 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG259_08305 PF12833 Helix-turn-helix domain BG259_08310 PF04261 Dyp-type peroxidase family BG259_08315 PF11143 Protein of unknown function (DUF2919) BG259_08335 PF03960 ArsC family BG259_08340 PF07687 Peptidase dimerisation domain BG259_08340 PF01546 Peptidase family M20/M25/M40 BG259_08360 PF00701 Dihydrodipicolinate synthetase family BG259_08365 PF01842 ACT domain BG259_08370 PF00578 AhpC/TSA family BG259_08375 PF01594 AI-2E family transporter BG259_08385 PF01435 Peptidase family M48 BG259_08385 PF13181 Tetratricopeptide repeat BG259_08390 PF03960 ArsC family BG259_08395 PF03358 NADPH-dependent FMN reductase BG259_08410 PF00860 Permease family BG259_08420 PF00586 AIR synthase related protein, N-terminal domain BG259_08420 PF02769 AIR synthase related protein, C-terminal domain BG259_08430 PF00551 Formyl transferase BG259_08435 PF13230 Glutamine amidotransferases class-II BG259_08440 PF13580 SIS domain BG259_08445 PF02770 Acyl-CoA dehydrogenase, middle domain BG259_08445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG259_08445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG259_08445 PF09317 Domain of unknown function (DUF1974) BG259_08465 PF00929 Exonuclease BG259_08470 PF00075 RNase H BG259_08475 PF08241 Methyltransferase domain BG259_08480 PF16123 Hydroxyacylglutathione hydrolase C-terminus BG259_08485 PF01476 LysM domain BG259_08485 PF01464 Transglycosylase SLT domain BG259_08500 PF00543 Nitrogen regulatory protein P-II BG259_08505 PF00034 Cytochrome c BG259_08510 PF09179 TilS substrate binding domain BG259_08510 PF11734 TilS substrate C-terminal domain BG259_08510 PF01171 PP-loop family BG259_08515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BG259_08520 PF14579 Helix-hairpin-helix motif BG259_08520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG259_08520 PF02811 PHP domain BG259_08520 PF01336 OB-fold nucleic acid binding domain BG259_08520 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG259_08525 PF01351 Ribonuclease HII BG259_08530 PF02684 Lipid-A-disaccharide synthetase BG259_08535 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_08535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BG259_08540 PF07977 FabA-like domain BG259_08545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BG259_08545 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_08550 PF03938 Outer membrane protein (OmpH-like) BG259_08555 PF01103 Surface antigen BG259_08555 PF07244 Surface antigen variable number repeat BG259_08560 PF02163 Peptidase family M50 BG259_08560 PF17820 PDZ domain BG259_08565 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BG259_08565 PF13288 DXP reductoisomerase C-terminal domain BG259_08565 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BG259_08575 PF01255 Putative undecaprenyl diphosphate synthase BG259_08580 PF01765 Ribosome recycling factor BG259_08585 PF00696 Amino acid kinase family BG259_08590 PF00889 Elongation factor TS BG259_08595 PF00318 Ribosomal protein S2 BG259_08600 PF00557 Metallopeptidase family M24 BG259_08605 PF01842 ACT domain BG259_08605 PF08335 GlnD PII-uridylyltransferase BG259_08605 PF01966 HD domain BG259_08605 PF01909 Nucleotidyltransferase domain BG259_08610 PF11944 Protein of unknown function (DUF3461) BG259_08615 PF00849 RNA pseudouridylate synthase BG259_08620 PF04287 tRNA pseudouridine synthase C BG259_08650 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BG259_08660 PF01370 NAD dependent epimerase/dehydratase family BG259_08685 PF03806 AbgT putative transporter family BG259_08690 PF00444 Ribosomal protein L36 BG259_08695 PF01197 Ribosomal protein L31 BG259_08700 PF01980 tRNA-methyltransferase O BG259_08700 PF18389 TrmO C-terminal domain BG259_08705 PF03129 Anticodon binding domain BG259_08705 PF04073 Aminoacyl-tRNA editing domain BG259_08705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BG259_08715 PF06786 Uncharacterised protein family (UPF0253) BG259_08725 PF00209 Sodium:neurotransmitter symporter family BG259_08730 PF00704 Glycosyl hydrolases family 18 BG259_08730 PF00041 Fibronectin type III domain BG259_08740 PF01272 Transcription elongation factor, GreA/GreB, C-term BG259_08740 PF03449 Transcription elongation factor, N-terminal BG259_08745 PF00570 HRDC domain BG259_08745 PF00270 DEAD/DEAH box helicase BG259_08745 PF00271 Helicase conserved C-terminal domain BG259_08745 PF16124 RecQ zinc-binding BG259_08745 PF09382 RQC domain BG259_08750 PF11798 IMS family HHH motif BG259_08750 PF00817 impB/mucB/samB family BG259_08750 PF11799 impB/mucB/samB family C-terminal domain BG259_08755 PF00990 Diguanylate cyclase, GGDEF domain BG259_08755 PF00072 Response regulator receiver domain BG259_08765 PF02424 ApbE family BG259_08770 PF00175 Oxidoreductase NAD-binding domain BG259_08770 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_08770 PF00970 Oxidoreductase FAD-binding domain BG259_08775 PF02508 Rnf-Nqr subunit, membrane protein BG259_08780 PF02508 Rnf-Nqr subunit, membrane protein BG259_08785 PF04205 FMN-binding domain BG259_08795 PF01722 BolA-like protein BG259_08800 PF05175 Methyltransferase small domain BG259_08810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BG259_08815 PF07690 Major Facilitator Superfamily BG259_08825 PF04542 Sigma-70 region 2 BG259_08825 PF04545 Sigma-70, region 4 BG259_08840 PF03502 Nucleoside-specific channel-forming protein, Tsx BG259_08845 PF02558 Ketopantoate reductase PanE/ApbA BG259_08845 PF08546 Ketopantoate reductase PanE/ApbA C terminal BG259_08850 PF01965 DJ-1/PfpI family BG259_08855 PF00266 Aminotransferase class-V BG259_08860 PF02657 Fe-S metabolism associated domain BG259_08865 PF00899 ThiF family BG259_08870 PF03562 MltA specific insert domain BG259_08870 PF06725 3D domain BG259_08885 PF00696 Amino acid kinase family BG259_08885 PF00583 Acetyltransferase (GNAT) family BG259_08895 PF13538 UvrD-like helicase C-terminal domain BG259_08900 PF13361 UvrD-like helicase C-terminal domain BG259_08900 PF00580 UvrD/REP helicase N-terminal domain BG259_08900 PF12705 PD-(D/E)XK nuclease superfamily BG259_08905 PF17946 RecC C-terminal domain BG259_08910 PF00884 Sulfatase BG259_08910 PF11893 Domain of unknown function (DUF3413) BG259_08920 PF03466 LysR substrate binding domain BG259_08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_08925 PF07130 YebG protein BG259_08940 PF14602 Hexapeptide repeat of succinyl-transferase BG259_08940 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BG259_08945 PF03009 Glycerophosphoryl diester phosphodiesterase family BG259_08950 PF07690 Major Facilitator Superfamily BG259_08955 PF00230 Major intrinsic protein BG259_08960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BG259_08960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BG259_08965 PF08220 DeoR-like helix-turn-helix domain BG259_08965 PF00455 DeoR C terminal sensor domain BG259_08970 PF01266 FAD dependent oxidoreductase BG259_08970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BG259_08975 PF01464 Transglycosylase SLT domain BG259_08975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BG259_08995 PF01588 Putative tRNA binding domain BG259_09000 PF00356 Bacterial regulatory proteins, lacI family BG259_09005 PF01263 Aldose 1-epimerase BG259_09010 PF08544 GHMP kinases C terminal BG259_09010 PF10509 Galactokinase galactose-binding signature BG259_09010 PF00288 GHMP kinases N terminal domain BG259_09015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BG259_09015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BG259_09020 PF16363 GDP-mannose 4,6 dehydratase BG259_09025 PF00905 Penicillin binding protein transpeptidase domain BG259_09025 PF03717 Penicillin-binding Protein dimerisation domain BG259_09035 PF00356 Bacterial regulatory proteins, lacI family BG259_09040 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BG259_09040 PF02929 Beta galactosidase small chain BG259_09040 PF00703 Glycosyl hydrolases family 2 BG259_09040 PF02837 Glycosyl hydrolases family 2, sugar binding domain BG259_09040 PF16353 Domain of unknown function(DUF4981) BG259_09045 PF04074 YhcH/YjgK/YiaL BG259_09050 PF13520 Amino acid permease BG259_09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_09055 PF03466 LysR substrate binding domain BG259_09085 PF00437 Type II/IV secretion system protein BG259_09115 PF04972 BON domain BG259_09115 PF00263 Bacterial type II and III secretion system protein BG259_09115 PF13629 Pilus formation protein N terminal region BG259_09140 PF12833 Helix-turn-helix domain BG259_09140 PF02805 Metal binding domain of Ada BG259_09145 PF00501 AMP-binding enzyme BG259_09155 PF03466 LysR substrate binding domain BG259_09155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_09160 PF03764 Elongation factor G, domain IV BG259_09160 PF00009 Elongation factor Tu GTP binding domain BG259_09160 PF14492 Elongation Factor G, domain II BG259_09160 PF03144 Elongation factor Tu domain 2 BG259_09160 PF00679 Elongation factor G C-terminus BG259_09165 PF18073 Rubredoxin metal binding domain BG259_09175 PF18429 Domain of unknown function (DUF5609) BG259_09185 PF01048 Phosphorylase superfamily BG259_09190 PF01676 Metalloenzyme superfamily BG259_09195 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BG259_09195 PF00591 Glycosyl transferase family, a/b domain BG259_09195 PF02885 Glycosyl transferase family, helical bundle domain BG259_09200 PF01791 DeoC/LacD family aldolase BG259_09205 PF01773 Na+ dependent nucleoside transporter N-terminus BG259_09205 PF07662 Na+ dependent nucleoside transporter C-terminus BG259_09205 PF07670 Nucleoside recognition BG259_09210 PF01026 TatD related DNase BG259_09215 PF00009 Elongation factor Tu GTP binding domain BG259_09215 PF16658 Class II release factor RF3, C-terminal domain BG259_09215 PF03144 Elongation factor Tu domain 2 BG259_09220 PF05230 MASE2 domain BG259_09220 PF00990 Diguanylate cyclase, GGDEF domain BG259_09240 PF13508 Acetyltransferase (GNAT) domain BG259_09250 PF03707 Bacterial signalling protein N terminal repeat BG259_09250 PF00990 Diguanylate cyclase, GGDEF domain BG259_09250 PF00563 EAL domain BG259_09265 PF01554 MatE BG259_09275 PF07719 Tetratricopeptide repeat BG259_09275 PF13181 Tetratricopeptide repeat BG259_09280 PF00013 KH domain BG259_09280 PF00575 S1 RNA binding domain BG259_09280 PF01138 3' exoribonuclease family, domain 1 BG259_09280 PF03725 3' exoribonuclease family, domain 2 BG259_09280 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BG259_09285 PF00312 Ribosomal protein S15 BG259_09290 PF01509 TruB family pseudouridylate synthase (N terminal domain) BG259_09290 PF16198 tRNA pseudouridylate synthase B C-terminal domain BG259_09290 PF09157 Pseudouridine synthase II TruB, C-terminal BG259_09295 PF02033 Ribosome-binding factor A BG259_09300 PF04760 Translation initiation factor IF-2, N-terminal region BG259_09300 PF08364 Bacterial translation initiation factor IF-2 associated region BG259_09300 PF11987 Translation-initiation factor 2 BG259_09300 PF00009 Elongation factor Tu GTP binding domain BG259_09305 PF08529 NusA N-terminal domain BG259_09305 PF13184 NusA-like KH domain BG259_09305 PF00575 S1 RNA binding domain BG259_09310 PF17384 RimP C-terminal SH3 domain BG259_09310 PF02576 RimP N-terminal domain BG259_09325 PF03840 Preprotein translocase SecG subunit BG259_09330 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG259_09330 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG259_09330 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG259_09330 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG259_09335 PF00809 Pterin binding enzyme BG259_09340 PF00004 ATPase family associated with various cellular activities (AAA) BG259_09340 PF17862 AAA+ lid domain BG259_09340 PF01434 Peptidase family M41 BG259_09340 PF06480 FtsH Extracellular BG259_09345 PF01728 FtsJ-like methyltransferase BG259_09350 PF01985 CRS1 / YhbY (CRM) domain BG259_09355 PF01272 Transcription elongation factor, GreA/GreB, C-term BG259_09355 PF03449 Transcription elongation factor, N-terminal BG259_09360 PF13609 Gram-negative porin BG259_09365 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BG259_09375 PF00579 tRNA synthetases class I (W and Y) BG259_09380 PF01551 Peptidase family M23 BG259_09380 PF01476 LysM domain BG259_09380 PF08525 Opacity-associated protein A N-terminal motif BG259_09385 PF00873 AcrB/AcrD/AcrF family BG259_09390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_09395 PF01521 Iron-sulphur cluster biosynthesis BG259_09400 PF00202 Aminotransferase class-III BG259_09405 PF01594 AI-2E family transporter BG259_09410 PF08468 Methyltransferase small domain N-terminal BG259_09410 PF05175 Methyltransferase small domain BG259_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_09420 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_09420 PF00072 Response regulator receiver domain BG259_09420 PF00512 His Kinase A (phospho-acceptor) domain BG259_09425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_09430 PF00528 Binding-protein-dependent transport system inner membrane component BG259_09435 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_09435 PF00528 Binding-protein-dependent transport system inner membrane component BG259_09440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_09440 PF00005 ABC transporter BG259_09445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_09445 PF00005 ABC transporter BG259_09455 PF01869 BadF/BadG/BcrA/BcrD ATPase family BG259_09460 PF02838 Glycosyl hydrolase family 20, domain 2 BG259_09460 PF00728 Glycosyl hydrolase family 20, catalytic domain BG259_09465 PF06165 Glycosyltransferase family 36 BG259_09465 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BG259_09470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG259_09470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG259_09470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG259_09470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG259_09475 PF08402 TOBE domain BG259_09475 PF00005 ABC transporter BG259_09485 PF13416 Bacterial extracellular solute-binding protein BG259_09490 PF00909 Ammonium Transporter Family BG259_09495 PF00543 Nitrogen regulatory protein P-II BG259_09500 PF06062 Uncharacterised protein family (UPF0231) BG259_09505 PF06434 Aconitate hydratase 2 N-terminus BG259_09505 PF11791 Aconitate B N-terminal domain BG259_09505 PF00330 Aconitase family (aconitate hydratase) BG259_09510 PF01734 Patatin-like phospholipase BG259_09515 PF14814 Bifunctional transglycosylase second domain BG259_09515 PF00912 Transglycosylase BG259_09515 PF00905 Penicillin binding protein transpeptidase domain BG259_09520 PF00270 DEAD/DEAH box helicase BG259_09520 PF04408 Helicase associated domain (HA2) BG259_09520 PF00271 Helicase conserved C-terminal domain BG259_09520 PF08482 ATP-dependent helicase C-terminal BG259_09525 PF03749 Sugar fermentation stimulation protein RE domain BG259_09525 PF17746 SfsA N-terminal OB domain BG259_09530 PF01258 Prokaryotic dksA/traR C4-type zinc finger BG259_09535 PF00749 tRNA synthetases class I (E and Q), catalytic domain BG259_09540 PF12627 Probable RNA and SrmB- binding site of polymerase A BG259_09540 PF01743 Poly A polymerase head domain BG259_09540 PF12626 Polymerase A arginine-rich C-terminus BG259_09545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BG259_09550 PF02548 Ketopantoate hydroxymethyltransferase BG259_09555 PF02569 Pantoate-beta-alanine ligase BG259_09560 PF03279 Bacterial lipid A biosynthesis acyltransferase BG259_09565 PF01061 ABC-2 type transporter BG259_09570 PF00005 ABC transporter BG259_09575 PF00916 Sulfate permease family BG259_09575 PF01740 STAS domain BG259_09580 PF00484 Carbonic anhydrase BG259_09585 PF00156 Phosphoribosyl transferase domain BG259_09590 PF00440 Bacterial regulatory proteins, tetR family BG259_09595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_09600 PF02817 e3 binding domain BG259_09600 PF00364 Biotin-requiring enzyme BG259_09600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG259_09605 PF00456 Transketolase, thiamine diphosphate binding domain BG259_09605 PF17831 Pyruvate dehydrogenase E1 component middle domain BG259_09610 PF07729 FCD domain BG259_09610 PF00392 Bacterial regulatory proteins, gntR family BG259_09615 PF01510 N-acetylmuramoyl-L-alanine amidase BG259_09620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BG259_09620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BG259_09635 PF00437 Type II/IV secretion system protein BG259_09635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BG259_09640 PF00482 Type II secretion system (T2SS), protein F BG259_09645 PF06750 Bacterial Peptidase A24 N-terminal domain BG259_09645 PF01478 Type IV leader peptidase family BG259_09650 PF01121 Dephospho-CoA kinase BG259_09655 PF07072 Cell division protein BG259_09660 PF03884 DNA gyrase inhibitor YacG BG259_09665 PF01245 Ribosomal protein L19 BG259_09670 PF01746 tRNA (Guanine-1)-methyltransferase BG259_09675 PF01782 RimM N-terminal domain BG259_09675 PF05239 PRC-barrel domain BG259_09680 PF00886 Ribosomal protein S16 BG259_09685 PF00448 SRP54-type protein, GTPase domain BG259_09685 PF02881 SRP54-type protein, helical bundle domain BG259_09685 PF02978 Signal peptide binding domain BG259_09690 PF01578 Cytochrome C assembly protein BG259_09695 PF03471 Transporter associated domain BG259_09695 PF01595 Cyclin M transmembrane N-terminal domain BG259_09695 PF00571 CBS domain BG259_09700 PF02664 S-Ribosylhomocysteinase (LuxS) BG259_09710 PF04262 Glutamate-cysteine ligase BG259_09715 PF05193 Peptidase M16 inactive domain BG259_09715 PF00675 Insulinase (Peptidase family M16) BG259_09720 PF09335 SNARE associated Golgi protein BG259_09730 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BG259_09735 PF02436 Conserved carboxylase domain BG259_09735 PF00682 HMGL-like BG259_09735 PF00364 Biotin-requiring enzyme BG259_09740 PF04277 Oxaloacetate decarboxylase, gamma chain BG259_09795 PF02599 Global regulator protein family BG259_09800 PF13840 ACT domain BG259_09800 PF01842 ACT domain BG259_09800 PF00696 Amino acid kinase family BG259_09805 PF02272 DHHA1 domain BG259_09805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BG259_09805 PF01411 tRNA synthetases class II (A) BG259_09810 PF02631 RecX family BG259_09815 PF00154 recA bacterial DNA recombination protein BG259_09820 PF02464 Competence-damaged protein BG259_09825 PF01624 MutS domain I BG259_09825 PF05192 MutS domain III BG259_09825 PF00488 MutS domain V BG259_09825 PF05188 MutS domain II BG259_09825 PF05190 MutS family domain IV BG259_09830 PF04545 Sigma-70, region 4 BG259_09830 PF04539 Sigma-70 region 3 BG259_09830 PF00140 Sigma-70 factor, region 1.2 BG259_09830 PF04542 Sigma-70 region 2 BG259_09835 PF01551 Peptidase family M23 BG259_09835 PF01476 LysM domain BG259_09845 PF01975 Survival protein SurE BG259_09850 PF01142 tRNA pseudouridine synthase D (TruD) BG259_09855 PF02542 YgbB family BG259_09860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BG259_09865 PF04977 Septum formation initiator BG259_09870 PF03952 Enolase, N-terminal domain BG259_09870 PF00113 Enolase, C-terminal TIM barrel domain BG259_09875 PF00117 Glutamine amidotransferase class-I BG259_09875 PF06418 CTP synthase N-terminus BG259_09880 PF03819 MazG nucleotide pyrophosphohydrolase domain BG259_09885 PF04607 Region found in RelA / SpoT proteins BG259_09885 PF02824 TGS domain BG259_09885 PF13291 ACT domain BG259_09890 PF01938 TRAM domain BG259_09890 PF05958 tRNA (Uracil-5-)-methyltransferase BG259_09900 PF01627 Hpt domain BG259_09900 PF00672 HAMP domain BG259_09900 PF00072 Response regulator receiver domain BG259_09900 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BG259_09900 PF00512 His Kinase A (phospho-acceptor) domain BG259_09900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_09905 PF01648 4'-phosphopantetheinyl transferase superfamily BG259_09910 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BG259_09915 PF02565 Recombination protein O C terminal BG259_09915 PF11967 Recombination protein O N terminal BG259_09920 PF07650 KH domain BG259_09920 PF01926 50S ribosome-binding GTPase BG259_09925 PF14622 Ribonuclease-III-like BG259_09925 PF00035 Double-stranded RNA binding motif BG259_09930 PF10502 Signal peptidase, peptidase S26 BG259_09935 PF00679 Elongation factor G C-terminus BG259_09935 PF00009 Elongation factor Tu GTP binding domain BG259_09935 PF03144 Elongation factor Tu domain 2 BG259_09935 PF06421 GTP-binding protein LepA C-terminus BG259_09945 PF17188 MucB/RseB C-terminal domain BG259_09945 PF03888 MucB/RseB N-terminal domain BG259_09950 PF03873 Anti sigma-E protein RseA, C-terminal domain BG259_09950 PF03872 Anti sigma-E protein RseA, N-terminal domain BG259_09955 PF08281 Sigma-70, region 4 BG259_09955 PF04542 Sigma-70 region 2 BG259_09960 PF00890 FAD binding domain BG259_09960 PF02910 Fumarate reductase flavoprotein C-term BG259_09970 PF03937 Flavinator of succinate dehydrogenase BG259_09990 PF01494 FAD binding domain BG259_09995 PF01494 FAD binding domain BG259_10000 PF03695 Uncharacterised protein family (UPF0149) BG259_10005 PF05164 Cell division protein ZapA BG259_10015 PF01812 5-formyltetrahydrofolate cyclo-ligase family BG259_10020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BG259_10025 PF01842 ACT domain BG259_10025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_10025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG259_10030 PF04402 Protein of unknown function (DUF541) BG259_10035 PF03466 LysR substrate binding domain BG259_10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_10040 PF01810 LysE type translocator BG259_10050 PF05552 Conserved TM helix BG259_10050 PF00924 Mechanosensitive ion channel BG259_10055 PF01116 Fructose-bisphosphate aldolase class-II BG259_10060 PF00162 Phosphoglycerate kinase BG259_10065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG259_10065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG259_10075 PF00456 Transketolase, thiamine diphosphate binding domain BG259_10075 PF02780 Transketolase, C-terminal domain BG259_10075 PF02779 Transketolase, pyrimidine binding domain BG259_10080 PF02773 S-adenosylmethionine synthetase, C-terminal domain BG259_10080 PF02772 S-adenosylmethionine synthetase, central domain BG259_10080 PF00438 S-adenosylmethionine synthetase, N-terminal domain BG259_10090 PF10263 SprT-like family BG259_10090 PF17283 SprT-like zinc ribbon domain BG259_10100 PF04231 Endonuclease I BG259_10105 PF04452 RNA methyltransferase BG259_10110 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BG259_10110 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BG259_10115 PF02622 Uncharacterized ACR, COG1678 BG259_10120 PF03652 Holliday junction resolvase BG259_10125 PF00437 Type II/IV secretion system protein BG259_10130 PF00437 Type II/IV secretion system protein BG259_10135 PF01168 Alanine racemase, N-terminal domain BG259_10140 PF03807 NADP oxidoreductase coenzyme F420-dependent BG259_10140 PF14748 Pyrroline-5-carboxylate reductase dimerisation BG259_10145 PF02325 YGGT family BG259_10150 PF02594 Uncharacterised ACR, YggU family COG1872 BG259_10160 PF01725 Ham1 family BG259_10165 PF06969 HemN C-terminal domain BG259_10165 PF04055 Radical SAM superfamily BG259_10170 PF04960 Glutaminase BG259_10175 PF02086 D12 class N6 adenine-specific DNA methyltransferase BG259_10180 PF02390 Putative methyltransferase BG259_10185 PF00633 Helix-hairpin-helix motif BG259_10185 PF00730 HhH-GPD superfamily base excision DNA repair protein BG259_10185 PF14815 NUDIX domain BG259_10190 PF04362 Bacterial Fe(2+) trafficking BG259_10195 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BG259_10195 PF01464 Transglycosylase SLT domain BG259_10235 PF17200 Single Cache domain 2 BG259_10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_10235 PF00672 HAMP domain BG259_10265 PF00171 Aldehyde dehydrogenase family BG259_10310 PF00072 Response regulator receiver domain BG259_10315 PF00356 Bacterial regulatory proteins, lacI family BG259_10315 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG259_10320 PF04794 YdjC-like protein BG259_10325 PF02056 Family 4 glycosyl hydrolase BG259_10325 PF11975 Family 4 glycosyl hydrolase C-terminal domain BG259_10330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BG259_10335 PF02378 Phosphotransferase system, EIIC BG259_10340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_10360 PF00106 short chain dehydrogenase BG259_10370 PF03739 Lipopolysaccharide export system permease LptF/LptG BG259_10375 PF03739 Lipopolysaccharide export system permease LptF/LptG BG259_10380 PF00883 Cytosol aminopeptidase family, catalytic domain BG259_10380 PF02789 Cytosol aminopeptidase family, N-terminal domain BG259_10385 PF04364 DNA polymerase III chi subunit, HolC BG259_10390 PF00133 tRNA synthetases class I (I, L, M and V) BG259_10390 PF08264 Anticodon-binding domain of tRNA BG259_10390 PF10458 Valyl tRNA synthetase tRNA binding arm BG259_10400 PF00583 Acetyltransferase (GNAT) family BG259_10410 PF06877 Regulator of ribonuclease activity B BG259_10420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BG259_10420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BG259_10430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BG259_10430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BG259_10435 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BG259_10435 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BG259_10440 PF01042 Endoribonuclease L-PSP BG259_10445 PF01553 Acyltransferase BG259_10450 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BG259_10455 PF01722 BolA-like protein BG259_10465 PF05494 MlaC protein BG259_10470 PF02470 MlaD protein BG259_10475 PF02405 Permease MlaE BG259_10480 PF00005 ABC transporter BG259_10485 PF01699 Sodium/calcium exchanger protein BG259_10490 PF00571 CBS domain BG259_10490 PF01380 SIS domain BG259_10500 PF03968 OstA-like protein BG259_10505 PF00005 ABC transporter BG259_10505 PF12399 Branched-chain amino acid ATP-binding cassette transporter BG259_10510 PF00309 Sigma-54 factor, Activator interacting domain (AID) BG259_10510 PF04963 Sigma-54 factor, core binding domain BG259_10510 PF04552 Sigma-54, DNA binding domain BG259_10515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BG259_10520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_10525 PF03668 P-loop ATPase protein family BG259_10530 PF00381 PTS HPr component phosphorylation site BG259_10535 PF00571 CBS domain BG259_10535 PF03448 MgtE intracellular N domain BG259_10535 PF01769 Divalent cation transporter BG259_10540 PF01523 Putative modulator of DNA gyrase BG259_10545 PF04751 Protein of unknown function (DUF615) BG259_10550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_10550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG259_10555 PF00849 RNA pseudouridylate synthase BG259_10565 PF12137 RNA polymerase recycling family C-terminal BG259_10565 PF18337 RapA N-terminal Tudor like domain BG259_10565 PF00271 Helicase conserved C-terminal domain BG259_10565 PF18339 RapA N-terminal Tudor like domain 1 BG259_10565 PF00176 SNF2 family N-terminal domain BG259_10570 PF02562 PhoH-like protein BG259_10570 PF13638 PIN domain BG259_10575 PF01523 Putative modulator of DNA gyrase BG259_10580 PF00795 Carbon-nitrogen hydrolase BG259_10585 PF13116 Protein of unknown function BG259_10585 PF13502 AsmA-like C-terminal region BG259_10590 PF10150 Ribonuclease E/G family BG259_10590 PF00575 S1 RNA binding domain BG259_10595 PF02545 Maf-like protein BG259_10600 PF04093 rod shape-determining protein MreD BG259_10605 PF04085 rod shape-determining protein MreC BG259_10645 PF07963 Prokaryotic N-terminal methylation motif BG259_10645 PF08334 Type II secretion system (T2SS), protein G BG259_10655 PF00482 Type II secretion system (T2SS), protein F BG259_10660 PF00437 Type II/IV secretion system protein BG259_10660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BG259_10670 PF13401 AAA domain BG259_10670 PF01471 Putative peptidoglycan binding domain BG259_10675 PF03958 Bacterial type II/III secretion system short domain BG259_10675 PF00263 Bacterial type II and III secretion system protein BG259_10695 PF00563 EAL domain BG259_10695 PF17157 Gammaproteobacterial periplasmic sensor domain BG259_10695 PF00990 Diguanylate cyclase, GGDEF domain BG259_10700 PF00436 Single-strand binding protein family BG259_10705 PF00196 Bacterial regulatory proteins, luxR family BG259_10710 PF00483 Nucleotidyl transferase BG259_10715 PF17755 UvrA DNA-binding domain BG259_10715 PF00005 ABC transporter BG259_10715 PF17760 UvrA interaction domain BG259_10725 PF00266 Aminotransferase class-V BG259_10735 PF01842 ACT domain BG259_10735 PF00696 Amino acid kinase family BG259_10740 PF02965 Vitamin B12 dependent methionine synthase, activation domain BG259_10740 PF02310 B12 binding domain BG259_10740 PF00809 Pterin binding enzyme BG259_10740 PF02574 Homocysteine S-methyltransferase BG259_10740 PF02607 B12 binding domain BG259_10745 PF00999 Sodium/hydrogen exchanger family BG259_10805 PF01507 Phosphoadenosine phosphosulfate reductase family BG259_10810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG259_10810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG259_10815 PF00258 Flavodoxin BG259_10815 PF00175 Oxidoreductase NAD-binding domain BG259_10815 PF00667 FAD binding domain BG259_10835 PF01207 Dihydrouridine synthase (Dus) BG259_10840 PF00589 Phage integrase family BG259_10840 PF02899 Phage integrase, N-terminal SAM-like domain BG259_10870 PF05840 Bacteriophage replication gene A protein (GPA) BG259_10940 PF01475 Ferric uptake regulator family BG259_10950 PF00342 Phosphoglucose isomerase BG259_10955 PF01894 Uncharacterised protein family UPF0047 BG259_10965 PF00842 Alanine racemase, C-terminal domain BG259_10965 PF01168 Alanine racemase, N-terminal domain BG259_10970 PF03796 DnaB-like helicase C terminal domain BG259_10970 PF00772 DnaB-like helicase N terminal domain BG259_10980 PF03948 Ribosomal protein L9, C-terminal domain BG259_10980 PF01281 Ribosomal protein L9, N-terminal domain BG259_10985 PF01084 Ribosomal protein S18 BG259_10990 PF01250 Ribosomal protein S6 BG259_10995 PF00834 Ribulose-phosphate 3 epimerase family BG259_11000 PF02086 D12 class N6 adenine-specific DNA methyltransferase BG259_11010 PF01761 3-dehydroquinate synthase BG259_11015 PF01202 Shikimate kinase BG259_11020 PF00263 Bacterial type II and III secretion system protein BG259_11020 PF03958 Bacterial type II/III secretion system short domain BG259_11020 PF11741 AMIN domain BG259_11020 PF07660 Secretin and TonB N terminus short domain BG259_11045 PF00912 Transglycosylase BG259_11045 PF17092 Penicillin-binding protein OB-like domain BG259_11045 PF00905 Penicillin binding protein transpeptidase domain BG259_11050 PF03466 LysR substrate binding domain BG259_11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_11055 PF00462 Glutaredoxin BG259_11055 PF08534 Redoxin BG259_11060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_11070 PF00206 Lyase BG259_11070 PF14698 Argininosuccinate lyase C-terminal BG259_11070 PF00583 Acetyltransferase (GNAT) family BG259_11075 PF00764 Arginosuccinate synthase BG259_11080 PF00696 Amino acid kinase family BG259_11085 PF01118 Semialdehyde dehydrogenase, NAD binding domain BG259_11085 PF02774 Semialdehyde dehydrogenase, dimerisation domain BG259_11090 PF01546 Peptidase family M20/M25/M40 BG259_11090 PF07687 Peptidase dimerisation domain BG259_11095 PF00311 Phosphoenolpyruvate carboxylase BG259_11105 PF02219 Methylenetetrahydrofolate reductase BG259_11110 PF00696 Amino acid kinase family BG259_11110 PF03447 Homoserine dehydrogenase, NAD binding domain BG259_11110 PF00742 Homoserine dehydrogenase BG259_11115 PF01053 Cys/Met metabolism PLP-dependent enzyme BG259_11120 PF01340 Met Apo-repressor, MetJ BG259_11125 PF00390 Malic enzyme, N-terminal domain BG259_11125 PF03949 Malic enzyme, NAD binding domain BG259_11130 PF00210 Ferritin-like domain BG259_11135 PF04324 BFD-like [2Fe-2S] binding domain BG259_11140 PF00009 Elongation factor Tu GTP binding domain BG259_11140 PF03143 Elongation factor Tu C-terminal domain BG259_11140 PF03144 Elongation factor Tu domain 2 BG259_11145 PF00009 Elongation factor Tu GTP binding domain BG259_11145 PF00679 Elongation factor G C-terminus BG259_11145 PF03144 Elongation factor Tu domain 2 BG259_11145 PF14492 Elongation Factor G, domain II BG259_11145 PF03764 Elongation factor G, domain IV BG259_11150 PF00177 Ribosomal protein S7p/S5e BG259_11155 PF00164 Ribosomal protein S12/S23 BG259_11160 PF04077 DsrH like protein BG259_11165 PF02635 DsrE/DsrF-like family BG259_11170 PF02635 DsrE/DsrF-like family BG259_11175 PF08348 YheO-like PAS domain BG259_11175 PF13309 HTH domain BG259_11180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_11180 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BG259_11190 PF04102 SlyX BG259_11195 PF01112 Asparaginase BG259_11200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_11210 PF00999 Sodium/hydrogen exchanger family BG259_11210 PF02254 TrkA-N domain BG259_11215 PF02525 Flavodoxin-like fold BG259_11220 PF00005 ABC transporter BG259_11220 PF12848 ABC transporter BG259_11230 PF00561 alpha/beta hydrolase fold BG259_11235 PF06794 Uncharacterised protein family (UPF0270) BG259_11240 PF00485 Phosphoribulokinase / Uridine kinase family BG259_11245 PF13545 Crp-like helix-turn-helix domain BG259_11245 PF00027 Cyclic nucleotide-binding domain BG259_11255 PF00171 Aldehyde dehydrogenase family BG259_11260 PF04958 Arginine N-succinyltransferase beta subunit BG259_11265 PF00202 Aminotransferase class-III BG259_11270 PF00117 Glutamine amidotransferase class-I BG259_11280 PF00267 Gram-negative porin BG259_11290 PF00579 tRNA synthetases class I (W and Y) BG259_11295 PF13419 Haloacid dehalogenase-like hydrolase BG259_11300 PF00588 SpoU rRNA Methylase family BG259_11300 PF08032 RNA 2'-O ribose methyltransferase substrate binding BG259_11305 PF08461 Ribonuclease R winged-helix domain BG259_11305 PF17876 Cold shock domain BG259_11305 PF00575 S1 RNA binding domain BG259_11305 PF08206 Ribonuclease B OB domain BG259_11305 PF00773 RNB domain BG259_11310 PF02082 Transcriptional regulator BG259_11315 PF00042 Globin BG259_11315 PF00970 Oxidoreductase FAD-binding domain BG259_11315 PF00175 Oxidoreductase NAD-binding domain BG259_11320 PF08238 Sel1 repeat BG259_11325 PF00709 Adenylosuccinate synthetase BG259_11330 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BG259_11335 PF01145 SPFH domain / Band 7 family BG259_11340 PF12221 Bacterial membrane protein N terminal BG259_11340 PF01145 SPFH domain / Band 7 family BG259_11345 PF16360 GTP-binding GTPase Middle Region BG259_11345 PF13167 GTP-binding GTPase N-terminal BG259_11345 PF01926 50S ribosome-binding GTPase BG259_11350 PF17209 Hfq protein BG259_11360 PF01119 DNA mismatch repair protein, C-terminal domain BG259_11360 PF08676 MutL C terminal dimerisation domain BG259_11365 PF01520 N-acetylmuramoyl-L-alanine amidase BG259_11370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BG259_11375 PF08331 Domain of unknown function (DUF1730) BG259_11440 PF00929 Exonuclease BG259_11445 PF03193 RsgA GTPase BG259_11450 PF02666 Phosphatidylserine decarboxylase BG259_11455 PF00939 Sodium:sulfate symporter transmembrane region BG259_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_11460 PF00672 HAMP domain BG259_11470 PF01676 Metalloenzyme superfamily BG259_11470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BG259_11475 PF00581 Rhodanese-like domain BG259_11480 PF02556 Preprotein translocase subunit SecB BG259_11485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BG259_11485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BG259_11490 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_11490 PF06426 Serine acetyltransferase, N-terminal BG259_11495 PF01551 Peptidase family M23 BG259_11505 PF00440 Bacterial regulatory proteins, tetR family BG259_11505 PF08360 QacR-like protein, C-terminal region BG259_11515 PF00152 tRNA synthetases class II (D, K and N) BG259_11520 PF00890 FAD binding domain BG259_11520 PF02910 Fumarate reductase flavoprotein C-term BG259_11525 PF13183 4Fe-4S dicluster domain BG259_11525 PF13085 2Fe-2S iron-sulfur cluster binding domain BG259_11530 PF02300 Fumarate reductase subunit C BG259_11535 PF02313 Fumarate reductase subunit D BG259_11550 PF08207 Elongation factor P (EF-P) KOW-like domain BG259_11550 PF09285 Elongation factor P, C-terminal BG259_11550 PF01132 Elongation factor P (EF-P) OB domain BG259_11555 PF04055 Radical SAM superfamily BG259_11560 PF02308 MgtC family BG259_11570 PF00118 TCP-1/cpn60 chaperonin family BG259_11575 PF00166 Chaperonin 10 Kd subunit BG259_11580 PF01554 MatE BG259_11585 PF00365 Phosphofructokinase BG259_11590 PF01545 Cation efflux family BG259_11590 PF16916 Dimerisation domain of Zinc Transporter BG259_11595 PF07813 LTXXQ motif family protein BG259_11600 PF00072 Response regulator receiver domain BG259_11600 PF00486 Transcriptional regulatory protein, C terminal BG259_11605 PF00672 HAMP domain BG259_11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_11605 PF00512 His Kinase A (phospho-acceptor) domain BG259_11605 PF16527 Two-component sensor protein CpxA, periplasmic domain BG259_11610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BG259_11610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BG259_11615 PF00588 SpoU rRNA Methylase family BG259_11620 PF04186 FxsA cytoplasmic membrane protein BG259_11625 PF10415 Fumarase C C-terminus BG259_11625 PF00206 Lyase BG259_11630 PF03605 Anaerobic c4-dicarboxylate membrane transporter BG259_11635 PF02683 Cytochrome C biogenesis protein transmembrane region BG259_11635 PF11412 Disulphide bond corrector protein DsbC BG259_11640 PF00072 Response regulator receiver domain BG259_11640 PF00196 Bacterial regulatory proteins, luxR family BG259_11645 PF01914 MarC family integral membrane protein BG259_11655 PF00474 Sodium:solute symporter family BG259_11670 PF10415 Fumarase C C-terminus BG259_11670 PF00206 Lyase BG259_11675 PF00072 Response regulator receiver domain BG259_11675 PF01627 Hpt domain BG259_11675 PF00672 HAMP domain BG259_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_11675 PF00512 His Kinase A (phospho-acceptor) domain BG259_11680 PF12832 MFS_1 like family BG259_11695 PF16177 Acetyl-coenzyme A synthetase N-terminus BG259_11695 PF00501 AMP-binding enzyme BG259_11695 PF13193 AMP-binding enzyme C-terminal domain BG259_11700 PF01220 Dehydroquinase class II BG259_11705 PF00364 Biotin-requiring enzyme BG259_11710 PF02785 Biotin carboxylase C-terminal domain BG259_11710 PF00289 Biotin carboxylase, N-terminal domain BG259_11710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG259_11720 PF01207 Dihydrouridine synthase (Dus) BG259_11725 PF02954 Bacterial regulatory protein, Fis family BG259_11730 PF13188 PAS domain BG259_11730 PF03707 Bacterial signalling protein N terminal repeat BG259_11730 PF00990 Diguanylate cyclase, GGDEF domain BG259_11730 PF00563 EAL domain BG259_11750 PF08240 Alcohol dehydrogenase GroES-like domain BG259_11750 PF00107 Zinc-binding dehydrogenase BG259_11755 PF01276 Orn/Lys/Arg decarboxylase, major domain BG259_11755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BG259_11755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BG259_11760 PF13520 Amino acid permease BG259_11770 PF18500 CadC C-terminal domain 1 BG259_11770 PF00486 Transcriptional regulatory protein, C terminal BG259_11775 PF13411 MerR HTH family regulatory protein BG259_11785 PF01808 AICARFT/IMPCHase bienzyme BG259_11785 PF02142 MGS-like domain BG259_11790 PF02844 Phosphoribosylglycinamide synthetase, N domain BG259_11790 PF02843 Phosphoribosylglycinamide synthetase, C domain BG259_11790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BG259_11800 PF00216 Bacterial DNA-binding protein BG259_11805 PF00571 CBS domain BG259_11805 PF01595 Cyclin M transmembrane N-terminal domain BG259_11810 PF04222 Protein of unknown function (DUF416) BG259_11815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_11820 PF03167 Uracil DNA glycosylase superfamily BG259_11825 PF01208 Uroporphyrinogen decarboxylase (URO-D) BG259_11840 PF00293 NUDIX domain BG259_11840 PF09297 NADH pyrophosphatase zinc ribbon domain BG259_11845 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BG259_11850 PF05000 RNA polymerase Rpb1, domain 4 BG259_11850 PF04983 RNA polymerase Rpb1, domain 3 BG259_11850 PF04997 RNA polymerase Rpb1, domain 1 BG259_11850 PF00623 RNA polymerase Rpb1, domain 2 BG259_11850 PF04998 RNA polymerase Rpb1, domain 5 BG259_11855 PF04565 RNA polymerase Rpb2, domain 3 BG259_11855 PF10385 RNA polymerase beta subunit external 1 domain BG259_11855 PF00562 RNA polymerase Rpb2, domain 6 BG259_11855 PF04560 RNA polymerase Rpb2, domain 7 BG259_11855 PF04561 RNA polymerase Rpb2, domain 2 BG259_11855 PF04563 RNA polymerase beta subunit BG259_11860 PF00542 Ribosomal protein L7/L12 C-terminal domain BG259_11860 PF16320 Ribosomal protein L7/L12 dimerisation domain BG259_11865 PF00466 Ribosomal protein L10 BG259_11870 PF00687 Ribosomal protein L1p/L10e family BG259_11875 PF00298 Ribosomal protein L11, RNA binding domain BG259_11875 PF03946 Ribosomal protein L11, N-terminal domain BG259_11880 PF00467 KOW motif BG259_11880 PF02357 Transcription termination factor nusG BG259_11885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BG259_11890 PF00009 Elongation factor Tu GTP binding domain BG259_11890 PF03144 Elongation factor Tu domain 2 BG259_11890 PF03143 Elongation factor Tu C-terminal domain BG259_11915 PF00485 Phosphoribulokinase / Uridine kinase family BG259_11920 PF02237 Biotin protein ligase C terminal domain BG259_11920 PF03099 Biotin/lipoate A/B protein ligase family BG259_11920 PF08279 HTH domain BG259_11925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BG259_11925 PF01565 FAD binding domain BG259_11935 PF13091 PLD-like domain BG259_12040 PF01177 Asp/Glu/Hydantoin racemase BG259_12050 PF07715 TonB-dependent Receptor Plug Domain BG259_12050 PF00593 TonB dependent receptor BG259_12055 PF05958 tRNA (Uracil-5-)-methyltransferase BG259_12065 PF00440 Bacterial regulatory proteins, tetR family BG259_12070 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_12070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_12075 PF01554 MatE BG259_12085 PF01726 LexA DNA binding domain BG259_12085 PF00717 Peptidase S24-like BG259_12095 PF01553 Acyltransferase BG259_12100 PF01040 UbiA prenyltransferase family BG259_12105 PF04345 Chorismate lyase BG259_12110 PF03748 Flagellar basal body-associated protein FliL BG259_12115 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BG259_12115 PF01694 Rhomboid family BG259_12120 PF00581 Rhodanese-like domain BG259_12125 PF00140 Sigma-70 factor, region 1.2 BG259_12125 PF04542 Sigma-70 region 2 BG259_12125 PF04545 Sigma-70, region 4 BG259_12130 PF18075 FtsX extracellular domain BG259_12135 PF00005 ABC transporter BG259_12140 PF00448 SRP54-type protein, GTPase domain BG259_12140 PF02881 SRP54-type protein, helical bundle domain BG259_12155 PF01914 MarC family integral membrane protein BG259_12175 PF10694 Protein of unknown function (DUF2500) BG259_12200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG259_12200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG259_12205 PF01022 Bacterial regulatory protein, arsR family BG259_12210 PF00563 EAL domain BG259_12210 PF08668 HDOD domain BG259_12215 PF01810 LysE type translocator BG259_12220 PF12146 Serine aminopeptidase, S33 BG259_12245 PF10442 FIST C domain BG259_12245 PF08495 FIST N domain BG259_12245 PF00990 Diguanylate cyclase, GGDEF domain BG259_12245 PF00563 EAL domain BG259_12250 PF13419 Haloacid dehalogenase-like hydrolase BG259_12255 PF02899 Phage integrase, N-terminal SAM-like domain BG259_12255 PF00589 Phage integrase family BG259_12265 PF01678 Diaminopimelate epimerase BG259_12270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BG259_12270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BG259_12280 PF01491 Frataxin-like domain BG259_12285 PF12633 Adenylate cyclase NT domain BG259_12285 PF01295 Adenylate cyclase, class-I BG259_12290 PF03900 Porphobilinogen deaminase, C-terminal domain BG259_12290 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BG259_12295 PF02602 Uroporphyrinogen-III synthase HemD BG259_12300 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BG259_12305 PF07219 HemY protein N-terminus BG259_12340 PF00175 Oxidoreductase NAD-binding domain BG259_12345 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_12350 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BG259_12360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_12360 PF07497 Rho termination factor, RNA-binding domain BG259_12360 PF07498 Rho termination factor, N-terminal domain BG259_12365 PF00085 Thioredoxin BG259_12370 PF00271 Helicase conserved C-terminal domain BG259_12370 PF00270 DEAD/DEAH box helicase BG259_12375 PF02541 Ppx/GppA phosphatase family BG259_12380 PF02592 Putative vitamin uptake transporter BG259_12390 PF00271 Helicase conserved C-terminal domain BG259_12390 PF09382 RQC domain BG259_12390 PF00570 HRDC domain BG259_12390 PF16124 RecQ zinc-binding BG259_12390 PF00270 DEAD/DEAH box helicase BG259_12395 PF00892 EamA-like transporter family BG259_12405 PF01810 LysE type translocator BG259_12420 PF13361 UvrD-like helicase C-terminal domain BG259_12420 PF00580 UvrD/REP helicase N-terminal domain BG259_12430 PF05114 Protein of unknown function (DUF692) BG259_12450 PF07690 Major Facilitator Superfamily BG259_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_12455 PF03466 LysR substrate binding domain BG259_12460 PF01321 Creatinase/Prolidase N-terminal domain BG259_12460 PF01321 Creatinase/Prolidase N-terminal domain BG259_12460 PF00557 Metallopeptidase family M24 BG259_12460 PF00557 Metallopeptidase family M24 BG259_12465 PF06968 Biotin and Thiamin Synthesis associated domain BG259_12465 PF04055 Radical SAM superfamily BG259_12470 PF05690 Thiazole biosynthesis protein ThiG BG259_12475 PF02597 ThiS family BG259_12480 PF00899 ThiF family BG259_12485 PF02581 Thiamine monophosphate synthase BG259_12490 PF13667 ThiC-associated domain BG259_12490 PF01964 Radical SAM ThiC family BG259_12495 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BG259_12500 PF00394 Multicopper oxidase BG259_12500 PF07731 Multicopper oxidase BG259_12500 PF07732 Multicopper oxidase BG259_12545 PF12724 Flavodoxin domain BG259_12550 PF02386 Cation transport protein BG259_12555 PF01205 Uncharacterized protein family UPF0029 BG259_12555 PF09186 Domain of unknown function (DUF1949) BG259_12560 PF00378 Enoyl-CoA hydratase/isomerase BG259_12560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BG259_12560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BG259_12565 PF00108 Thiolase, N-terminal domain BG259_12565 PF02803 Thiolase, C-terminal domain BG259_12570 PF08240 Alcohol dehydrogenase GroES-like domain BG259_12570 PF00107 Zinc-binding dehydrogenase BG259_12575 PF03466 LysR substrate binding domain BG259_12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_12585 PF01206 Sulfurtransferase TusA BG259_12595 PF01169 Uncharacterized protein family UPF0016 BG259_12600 PF02091 Glycyl-tRNA synthetase alpha subunit BG259_12605 PF05746 DALR anticodon binding domain BG259_12605 PF02092 Glycyl-tRNA synthetase beta subunit BG259_12610 PF00128 Alpha amylase, catalytic domain BG259_12615 PF00155 Aminotransferase class I and II BG259_12620 PF00011 Hsp20/alpha crystallin family BG259_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_12625 PF00986 DNA gyrase B subunit, carboxyl terminus BG259_12625 PF00204 DNA gyrase B BG259_12625 PF01751 Toprim domain BG259_12625 PF18053 DNA gyrase B subunit insert domain BG259_12630 PF02463 RecF/RecN/SMC N terminal domain BG259_12635 PF02767 DNA polymerase III beta subunit, central domain BG259_12635 PF02768 DNA polymerase III beta subunit, C-terminal domain BG259_12635 PF00712 DNA polymerase III beta subunit, N-terminal domain BG259_12640 PF08299 Bacterial dnaA protein helix-turn-helix BG259_12640 PF11638 DnaA N-terminal domain BG259_12640 PF00308 Bacterial dnaA protein BG259_12645 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_12650 PF00528 Binding-protein-dependent transport system inner membrane component BG259_12655 PF00005 ABC transporter BG259_12660 PF00468 Ribosomal protein L34 BG259_12665 PF00825 Ribonuclease P BG259_12670 PF01809 Putative membrane protein insertion efficiency factor BG259_12675 PF14849 YidC periplasmic domain BG259_12675 PF02096 60Kd inner membrane protein BG259_12680 PF12631 MnmE helical domain BG259_12680 PF01926 50S ribosome-binding GTPase BG259_12680 PF10396 GTP-binding protein TrmE N-terminus BG259_12720 PF11867 Domain of unknown function (DUF3387) BG259_12720 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BG259_12720 PF18766 SWI2/SNF2 ATPase BG259_12735 PF02384 N-6 DNA Methylase BG259_12735 PF12161 HsdM N-terminal domain BG259_12770 PF01381 Helix-turn-helix BG259_12785 PF00258 Flavodoxin BG259_12790 PF01134 Glucose inhibited division protein A BG259_12790 PF13932 GidA associated domain BG259_12795 PF02527 rRNA small subunit methyltransferase G BG259_12800 PF13614 AAA domain BG259_12805 PF02195 ParB-like nuclease domain BG259_12805 PF17762 HTH domain found in ParB protein BG259_12810 PF03899 ATP synthase I chain BG259_12815 PF00119 ATP synthase A chain BG259_12820 PF00137 ATP synthase subunit C BG259_12825 PF00430 ATP synthase B/B' CF(0) BG259_12830 PF00213 ATP synthase delta (OSCP) subunit BG259_12835 PF00306 ATP synthase alpha/beta chain, C terminal domain BG259_12835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_12835 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG259_12840 PF00231 ATP synthase BG259_12845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_12845 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG259_12850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BG259_12850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BG259_12855 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_12855 PF12804 MobA-like NTP transferase domain BG259_12860 PF00528 Binding-protein-dependent transport system inner membrane component BG259_12865 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_12870 PF07690 Major Facilitator Superfamily BG259_12875 PF03466 LysR substrate binding domain BG259_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_12880 PF00291 Pyridoxal-phosphate dependent enzyme BG259_12880 PF00585 C-terminal regulatory domain of Threonine dehydratase BG259_12885 PF00920 Dehydratase family BG259_12890 PF01063 Amino-transferase class IV BG259_12900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG259_12900 PF00205 Thiamine pyrophosphate enzyme, central domain BG259_12900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG259_12905 PF13335 Magnesium chelatase, subunit ChlI C-terminal BG259_12905 PF01078 Magnesium chelatase, subunit ChlI BG259_12910 PF00990 Diguanylate cyclase, GGDEF domain BG259_12910 PF08448 PAS fold BG259_12920 PF01553 Acyltransferase BG259_12925 PF01323 DSBA-like thioredoxin domain BG259_12930 PF01636 Phosphotransferase enzyme family BG259_12935 PF02899 Phage integrase, N-terminal SAM-like domain BG259_12935 PF00589 Phage integrase family BG259_12965 PF05840 Bacteriophage replication gene A protein (GPA) BG259_13035 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BG259_13035 PF12801 4Fe-4S binding domain BG259_13035 PF13746 4Fe-4S dicluster domain BG259_13040 PF06288 Protein of unknown function (DUF1040) BG259_13045 PF07070 SpoOM protein BG259_13050 PF03006 Haemolysin-III related BG259_13060 PF02386 Cation transport protein BG259_13065 PF02254 TrkA-N domain BG259_13065 PF02080 TrkA-C domain BG259_13070 PF01029 NusB family BG259_13070 PF01189 16S rRNA methyltransferase RsmB/F BG259_13075 PF02911 Formyl transferase, C-terminal domain BG259_13075 PF00551 Formyl transferase BG259_13080 PF01327 Polypeptide deformylase BG259_13090 PF17782 DprA winged helix domain BG259_13090 PF02481 DNA recombination-mediator protein A BG259_13095 PF04361 Protein of unknown function (DUF494) BG259_13100 PF01396 Topoisomerase DNA binding C4 zinc finger BG259_13105 PF02222 ATP-grasp domain BG259_13105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BG259_13110 PF00731 AIR carboxylase BG259_13115 PF01300 Telomere recombination BG259_13120 PF01218 Coproporphyrinogen III oxidase BG259_13125 PF01488 Shikimate / quinate 5-dehydrogenase BG259_13125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BG259_13125 PF08501 Shikimate dehydrogenase substrate binding domain BG259_13135 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_13175 PF03466 LysR substrate binding domain BG259_13180 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BG259_13180 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BG259_13185 PF04380 Membrane fusogenic activity BG259_13190 PF00873 AcrB/AcrD/AcrF family BG259_13195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_13200 PF08359 YsiA-like protein, C-terminal region BG259_13200 PF00440 Bacterial regulatory proteins, tetR family BG259_13205 PF00580 UvrD/REP helicase N-terminal domain BG259_13205 PF13361 UvrD-like helicase C-terminal domain BG259_13210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG259_13250 PF00005 ABC transporter BG259_13250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_13255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_13265 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_13265 PF00528 Binding-protein-dependent transport system inner membrane component BG259_13295 PF00069 Protein kinase domain BG259_13300 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG259_13300 PF00356 Bacterial regulatory proteins, lacI family BG259_13305 PF03466 LysR substrate binding domain BG259_13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_13310 PF00893 Small Multidrug Resistance protein BG259_13315 PF00893 Small Multidrug Resistance protein BG259_13320 PF00920 Dehydratase family BG259_13325 PF01202 Shikimate kinase BG259_13330 PF02447 GntP family permease BG259_13335 PF01081 KDPG and KHG aldolase BG259_13340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_13340 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_13355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BG259_13365 PF01432 Peptidase family M3 BG259_13370 PF01037 Lrp/AsnC ligand binding domain BG259_13375 PF08448 PAS fold BG259_13375 PF00990 Diguanylate cyclase, GGDEF domain BG259_13375 PF00563 EAL domain BG259_13380 PF04445 Putative SAM-dependent methyltransferase BG259_13390 PF00892 EamA-like transporter family BG259_13395 PF00582 Universal stress protein family BG259_13405 PF00210 Ferritin-like domain BG259_13410 PF10625 Universal stress protein B (UspB) BG259_13420 PF00474 Sodium:solute symporter family BG259_13425 PF03707 Bacterial signalling protein N terminal repeat BG259_13425 PF00990 Diguanylate cyclase, GGDEF domain BG259_13425 PF00563 EAL domain BG259_13435 PF02646 RmuC family BG259_13440 PF01209 ubiE/COQ5 methyltransferase family BG259_13445 PF02036 SCP-2 sterol transfer family BG259_13450 PF03109 ABC1 family BG259_13455 PF02416 mttA/Hcf106 family BG259_13460 PF02416 mttA/Hcf106 family BG259_13465 PF00902 Sec-independent protein translocase protein (TatC) BG259_13470 PF01026 TatD related DNase BG259_13475 PF00490 Delta-aminolevulinic acid dehydratase BG259_13490 PF00476 DNA polymerase family A BG259_13490 PF01367 5'-3' exonuclease, C-terminal SAM fold BG259_13490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BG259_13490 PF01612 3'-5' exonuclease BG259_13495 PF01926 50S ribosome-binding GTPase BG259_13500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG259_13510 PF04220 Der GTPase activator (YihI) BG259_13520 PF06969 HemN C-terminal domain BG259_13520 PF04055 Radical SAM superfamily BG259_13525 PF00962 Adenosine/AMP deaminase BG259_13530 PF00563 EAL domain BG259_13530 PF00990 Diguanylate cyclase, GGDEF domain BG259_13530 PF03707 Bacterial signalling protein N terminal repeat BG259_13535 PF00072 Response regulator receiver domain BG259_13535 PF00158 Sigma-54 interaction domain BG259_13535 PF02954 Bacterial regulatory protein, Fis family BG259_13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_13540 PF00512 His Kinase A (phospho-acceptor) domain BG259_13540 PF00989 PAS fold BG259_13550 PF03951 Glutamine synthetase, beta-Grasp domain BG259_13550 PF00120 Glutamine synthetase, catalytic domain BG259_13575 PF03631 Virulence factor BrkB BG259_13580 PF02580 D-Tyr-tRNA(Tyr) deacylase BG259_13585 PF09500 Putative thioesterase (yiiD_Cterm) BG259_13585 PF00583 Acetyltransferase (GNAT) family BG259_13595 PF01293 Phosphoenolpyruvate carboxykinase BG259_13600 PF01430 Hsp33 protein BG259_13605 PF01479 S4 domain BG259_13610 PF11356 Type II secretion system protein C BG259_13615 PF00263 Bacterial type II and III secretion system protein BG259_13615 PF03958 Bacterial type II/III secretion system short domain BG259_13620 PF00437 Type II/IV secretion system protein BG259_13625 PF00482 Type II secretion system (T2SS), protein F BG259_13630 PF08334 Type II secretion system (T2SS), protein G BG259_13630 PF07963 Prokaryotic N-terminal methylation motif BG259_13635 PF12019 Type II transport protein GspH BG259_13640 PF07963 Prokaryotic N-terminal methylation motif BG259_13640 PF02501 Type II secretion system (T2SS), protein I BG259_13645 PF07963 Prokaryotic N-terminal methylation motif BG259_13645 PF11612 Type II secretion system (T2SS), protein J BG259_13650 PF03934 Type II secretion system (T2SS), protein K BG259_13655 PF12693 GspL periplasmic domain BG259_13655 PF05134 Type II secretion system (T2SS), protein L BG259_13660 PF04612 Type II secretion system (T2SS), protein M BG259_13665 PF01203 Type II secretion system (T2SS), protein N BG259_13670 PF00459 Inositol monophosphatase family BG259_13675 PF00293 NUDIX domain BG259_13680 PF01106 NifU-like domain BG259_13680 PF01521 Iron-sulphur cluster biosynthesis BG259_13685 PF00156 Phosphoribosyl transferase domain BG259_13690 PF00561 alpha/beta hydrolase fold BG259_13700 PF16921 Tex protein YqgF-like domain BG259_13700 PF09371 Tex-like protein N-terminal domain BG259_13700 PF00575 S1 RNA binding domain BG259_13700 PF17674 HHH domain BG259_13710 PF03449 Transcription elongation factor, N-terminal BG259_13710 PF01272 Transcription elongation factor, GreA/GreB, C-term BG259_13715 PF00072 Response regulator receiver domain BG259_13715 PF00486 Transcriptional regulatory protein, C terminal BG259_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_13720 PF00672 HAMP domain BG259_13720 PF00512 His Kinase A (phospho-acceptor) domain BG259_13725 PF00860 Permease family BG259_13730 PF00326 Prolyl oligopeptidase family BG259_13735 PF00270 DEAD/DEAH box helicase BG259_13735 PF00271 Helicase conserved C-terminal domain BG259_13735 PF17191 RecG wedge domain BG259_13740 PF00588 SpoU rRNA Methylase family BG259_13740 PF12105 SpoU, rRNA methylase, C-terminal BG259_13745 PF02824 TGS domain BG259_13745 PF04607 Region found in RelA / SpoT proteins BG259_13745 PF13291 ACT domain BG259_13750 PF01192 RNA polymerase Rpb6 BG259_13755 PF00625 Guanylate kinase BG259_13770 PF02472 Biopolymer transport protein ExbD/TolR BG259_13775 PF01618 MotA/TolQ/ExbB proton channel family BG259_13790 PF00593 TonB dependent receptor BG259_13790 PF07715 TonB-dependent Receptor Plug Domain BG259_13795 PF00528 Binding-protein-dependent transport system inner membrane component BG259_13800 PF00528 Binding-protein-dependent transport system inner membrane component BG259_13800 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_13805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_13810 PF00005 ABC transporter BG259_13810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_13815 PF00005 ABC transporter BG259_13815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_13830 PF00892 EamA-like transporter family BG259_13840 PF00486 Transcriptional regulatory protein, C terminal BG259_13840 PF00072 Response regulator receiver domain BG259_13845 PF08340 Domain of unknown function (DUF1732) BG259_13845 PF03755 YicC-like family, N-terminal region BG259_13850 PF03725 3' exoribonuclease family, domain 2 BG259_13850 PF01138 3' exoribonuclease family, domain 1 BG259_13860 PF03279 Bacterial lipid A biosynthesis acyltransferase BG259_13865 PF00440 Bacterial regulatory proteins, tetR family BG259_13870 PF04127 DNA / pantothenate metabolism flavoprotein BG259_13870 PF02441 Flavoprotein BG259_13875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_13875 PF17200 Single Cache domain 2 BG259_13875 PF00672 HAMP domain BG259_13880 PF04002 RadC-like JAB domain BG259_13885 PF00830 Ribosomal L28 family BG259_13890 PF00471 Ribosomal protein L33 BG259_13895 PF00884 Sulfatase BG259_13905 PF06827 Zinc finger found in FPG and IleRS BG259_13905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BG259_13905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BG259_13910 PF01467 Cytidylyltransferase-like BG259_13915 PF05686 Glycosyl transferase family 90 BG259_13920 PF00535 Glycosyl transferase family 2 BG259_13925 PF00535 Glycosyl transferase family 2 BG259_13930 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BG259_13935 PF01219 Prokaryotic diacylglycerol kinase BG259_13945 PF16363 GDP-mannose 4,6 dehydratase BG259_13950 PF00483 Nucleotidyl transferase BG259_13960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG259_13960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG259_13985 PF13193 AMP-binding enzyme C-terminal domain BG259_13985 PF00501 AMP-binding enzyme BG259_13990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BG259_14000 PF02719 Polysaccharide biosynthesis protein BG259_14005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BG259_14010 PF02350 UDP-N-acetylglucosamine 2-epimerase BG259_14015 PF03102 NeuB family BG259_14015 PF08666 SAF domain BG259_14025 PF00483 Nucleotidyl transferase BG259_14030 PF02348 Cytidylyltransferase BG259_14030 PF13472 GDSL-like Lipase/Acylhydrolase family BG259_14040 PF00202 Aminotransferase class-III BG259_14045 PF00795 Carbon-nitrogen hydrolase BG259_14065 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BG259_14070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BG259_14075 PF03279 Bacterial lipid A biosynthesis acyltransferase BG259_14080 PF01370 NAD dependent epimerase/dehydratase family BG259_14085 PF06082 Exopolysaccharide biosynthesis protein YbjH BG259_14150 PF00535 Glycosyl transferase family 2 BG259_14160 PF00534 Glycosyl transferases group 1 BG259_14160 PF13439 Glycosyltransferase Family 4 BG259_14165 PF13439 Glycosyltransferase Family 4 BG259_14165 PF00534 Glycosyl transferases group 1 BG259_14170 PF16363 GDP-mannose 4,6 dehydratase BG259_14175 PF01370 NAD dependent epimerase/dehydratase family BG259_14180 PF00293 NUDIX domain BG259_14185 PF01050 Mannose-6-phosphate isomerase BG259_14185 PF00483 Nucleotidyl transferase BG259_14190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG259_14190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG259_14190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG259_14190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG259_14195 PF01238 Phosphomannose isomerase type I BG259_14200 PF00535 Glycosyl transferase family 2 BG259_14205 PF01370 NAD dependent epimerase/dehydratase family BG259_14210 PF02397 Bacterial sugar transferase BG259_14215 PF02719 Polysaccharide biosynthesis protein BG259_14220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BG259_14220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BG259_14220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BG259_14225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BG259_14225 PF00753 Metallo-beta-lactamase superfamily BG259_14225 PF10996 Beta-Casp domain BG259_14230 PF00121 Triosephosphate isomerase BG259_14255 PF08220 DeoR-like helix-turn-helix domain BG259_14255 PF00455 DeoR C terminal sensor domain BG259_14260 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BG259_14270 PF06005 Cell division protein ZapB BG259_14275 PF03737 Aldolase/RraA BG259_14280 PF01040 UbiA prenyltransferase family BG259_14285 PF00004 ATPase family associated with various cellular activities (AAA) BG259_14285 PF07724 AAA domain (Cdc48 subfamily) BG259_14290 PF00227 Proteasome subunit BG259_14300 PF00356 Bacterial regulatory proteins, lacI family BG259_14305 PF18074 Primosomal protein N C-terminal domain BG259_14305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BG259_14305 PF17764 3′ DNA-binding domain (3′BD) BG259_14305 PF00271 Helicase conserved C-terminal domain BG259_14305 PF00270 DEAD/DEAH box helicase BG259_14310 PF01197 Ribosomal protein L31 BG259_14315 PF00338 Ribosomal protein S10p/S20e BG259_14320 PF00297 Ribosomal protein L3 BG259_14325 PF00573 Ribosomal protein L4/L1 family BG259_14330 PF00276 Ribosomal protein L23 BG259_14335 PF00181 Ribosomal Proteins L2, RNA binding domain BG259_14335 PF03947 Ribosomal Proteins L2, C-terminal domain BG259_14340 PF00203 Ribosomal protein S19 BG259_14345 PF00237 Ribosomal protein L22p/L17e BG259_14350 PF07650 KH domain BG259_14350 PF00189 Ribosomal protein S3, C-terminal domain BG259_14355 PF00252 Ribosomal protein L16p/L10e BG259_14360 PF00831 Ribosomal L29 protein BG259_14365 PF00366 Ribosomal protein S17 BG259_14370 PF00238 Ribosomal protein L14p/L23e BG259_14375 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BG259_14375 PF00467 KOW motif BG259_14380 PF00281 Ribosomal protein L5 BG259_14380 PF00673 ribosomal L5P family C-terminus BG259_14385 PF00253 Ribosomal protein S14p/S29e BG259_14390 PF00410 Ribosomal protein S8 BG259_14395 PF00347 Ribosomal protein L6 BG259_14400 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BG259_14405 PF00333 Ribosomal protein S5, N-terminal domain BG259_14405 PF03719 Ribosomal protein S5, C-terminal domain BG259_14410 PF00327 Ribosomal protein L30p/L7e BG259_14415 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BG259_14420 PF00344 SecY translocase BG259_14425 PF00444 Ribosomal protein L36 BG259_14430 PF00416 Ribosomal protein S13/S18 BG259_14435 PF00411 Ribosomal protein S11 BG259_14440 PF01479 S4 domain BG259_14440 PF00163 Ribosomal protein S4/S9 N-terminal domain BG259_14445 PF01000 RNA polymerase Rpb3/RpoA insert domain BG259_14445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BG259_14445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BG259_14450 PF01196 Ribosomal protein L17 BG259_14460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BG259_14460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_14475 PF13673 Acetyltransferase (GNAT) domain BG259_14480 PF00271 Helicase conserved C-terminal domain BG259_14480 PF03880 DbpA RNA binding domain BG259_14480 PF00270 DEAD/DEAH box helicase BG259_14490 PF00149 Calcineurin-like phosphoesterase BG259_14490 PF02872 5'-nucleotidase, C-terminal domain BG259_14495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_14495 PF14824 Sirohaem biosynthesis protein central BG259_14495 PF10414 Sirohaem synthase dimerisation region BG259_14500 PF01507 Phosphoadenosine phosphosulfate reductase family BG259_14505 PF00009 Elongation factor Tu GTP binding domain BG259_14510 PF03600 Citrate transporter BG259_14510 PF02080 TrkA-C domain BG259_14535 PF00005 ABC transporter BG259_14545 PF10795 Protein of unknown function (DUF2607) BG259_14550 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BG259_14560 PF01625 Peptide methionine sulfoxide reductase BG259_14565 PF17243 POTRA domain TamA domain 1 BG259_14565 PF07244 Surface antigen variable number repeat BG259_14565 PF01103 Surface antigen BG259_14570 PF04357 TamB, inner membrane protein subunit of TAM complex BG259_14575 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BG259_14585 PF00719 Inorganic pyrophosphatase BG259_14590 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BG259_14595 PF01225 Mur ligase family, catalytic domain BG259_14595 PF08245 Mur ligase middle domain BG259_14595 PF02875 Mur ligase family, glutamate ligase domain BG259_14600 PF02441 Flavoprotein BG259_14610 PF00528 Binding-protein-dependent transport system inner membrane component BG259_14615 PF00005 ABC transporter BG259_14635 PF01316 Arginine repressor, DNA binding domain BG259_14635 PF02863 Arginine repressor, C-terminal domain BG259_14640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BG259_14640 PF00056 lactate/malate dehydrogenase, NAD binding domain BG259_14650 PF00348 Polyprenyl synthetase BG259_14655 PF00829 Ribosomal prokaryotic L21 protein BG259_14660 PF01016 Ribosomal L27 protein BG259_14665 PF01018 GTP1/OBG BG259_14665 PF01926 50S ribosome-binding GTPase BG259_14670 PF06738 Putative threonine/serine exporter BG259_14675 PF12821 Threonine/Serine exporter, ThrE BG259_14680 PF00186 Dihydrofolate reductase BG259_14685 PF00149 Calcineurin-like phosphoesterase BG259_14690 PF04379 ApaG domain BG259_14695 PF00398 Ribosomal RNA adenine dimethylase BG259_14700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BG259_14705 PF09312 SurA N-terminal domain BG259_14710 PF03968 OstA-like protein BG259_14710 PF04453 LPS transport system D BG259_14715 PF00226 DnaJ domain BG259_14715 PF05099 Tellurite resistance protein TerB BG259_14725 PF00694 Aconitase C-terminal domain BG259_14730 PF00330 Aconitase family (aconitate hydratase) BG259_14735 PF00180 Isocitrate/isopropylmalate dehydrogenase BG259_14740 PF08502 LeuA allosteric (dimerisation) domain BG259_14740 PF00682 HMGL-like BG259_14755 PF01569 PAP2 superfamily BG259_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_14765 PF03466 LysR substrate binding domain BG259_14770 PF00501 AMP-binding enzyme BG259_14775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG259_14775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG259_14775 PF00205 Thiamine pyrophosphate enzyme, central domain BG259_14780 PF10369 Small subunit of acetolactate synthase BG259_14795 PF02887 Pyruvate kinase, alpha/beta domain BG259_14795 PF00224 Pyruvate kinase, barrel domain BG259_14800 PF08220 DeoR-like helix-turn-helix domain BG259_14800 PF00455 DeoR C terminal sensor domain BG259_14805 PF01380 SIS domain BG259_14820 PF00486 Transcriptional regulatory protein, C terminal BG259_14820 PF00072 Response regulator receiver domain BG259_14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_14825 PF00512 His Kinase A (phospho-acceptor) domain BG259_14825 PF00672 HAMP domain BG259_14830 PF13419 Haloacid dehalogenase-like hydrolase BG259_14835 PF05068 Mannitol repressor BG259_14840 PF08125 Mannitol dehydrogenase C-terminal domain BG259_14840 PF01232 Mannitol dehydrogenase Rossmann domain BG259_14845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_14845 PF02378 Phosphotransferase system, EIIC BG259_14845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_14875 PF04539 Sigma-70 region 3 BG259_14875 PF03979 Sigma-70 factor, region 1.1 BG259_14875 PF04546 Sigma-70, non-essential region BG259_14875 PF04542 Sigma-70 region 2 BG259_14875 PF00140 Sigma-70 factor, region 1.2 BG259_14875 PF04545 Sigma-70, region 4 BG259_14880 PF10410 DnaB-helicase binding domain of primase BG259_14880 PF01807 CHC2 zinc finger BG259_14880 PF08275 DNA primase catalytic core, N-terminal domain BG259_14880 PF08278 DNA primase DnaG DnaB-binding BG259_14885 PF09424 Yqey-like protein BG259_14890 PF01165 Ribosomal protein S21 BG259_14895 PF00814 Glycoprotease family BG259_14900 PF00561 alpha/beta hydrolase fold BG259_14905 PF02660 Glycerol-3-phosphate acyltransferase BG259_14910 PF02152 Dihydroneopterin aldolase BG259_14915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BG259_14920 PF02673 Bacitracin resistance protein BacA BG259_14925 PF12627 Probable RNA and SrmB- binding site of polymerase A BG259_14925 PF01743 Poly A polymerase head domain BG259_14925 PF01966 HD domain BG259_14930 PF01471 Putative peptidoglycan binding domain BG259_14930 PF13401 AAA domain BG259_14940 PF08239 Bacterial SH3 domain BG259_14945 PF01384 Phosphate transporter family BG259_14950 PF01865 Protein of unknown function DUF47 BG259_14955 PF01928 CYTH domain BG259_14960 PF07885 Ion channel BG259_14965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_14965 PF02743 Cache domain BG259_14965 PF00672 HAMP domain BG259_14970 PF08335 GlnD PII-uridylyltransferase BG259_14970 PF03710 Glutamate-ammonia ligase adenylyltransferase BG259_14975 PF01467 Cytidylyltransferase-like BG259_14975 PF00294 pfkB family carbohydrate kinase BG259_14980 PF02321 Outer membrane efflux protein BG259_14985 PF00293 NUDIX domain BG259_14990 PF06853 Protein of unknown function (DUF1249) BG259_14995 PF00149 Calcineurin-like phosphoesterase BG259_15000 PF05728 Uncharacterised protein family (UPF0227) BG259_15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_15005 PF01751 Toprim domain BG259_15005 PF00986 DNA gyrase B subunit, carboxyl terminus BG259_15005 PF00204 DNA gyrase B BG259_15010 PF03989 DNA gyrase C-terminal domain, beta-propeller BG259_15010 PF00521 DNA gyrase/topoisomerase IV, subunit A BG259_15015 PF13180 PDZ domain BG259_15020 PF00595 PDZ domain BG259_15030 PF06295 Protein of unknown function (DUF1043) BG259_15035 PF03969 AFG1-like ATPase BG259_15040 PF00572 Ribosomal protein L13 BG259_15045 PF00380 Ribosomal protein S9/S16 BG259_15050 PF00355 Rieske [2Fe-2S] domain BG259_15050 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BG259_15055 PF00033 Cytochrome b/b6/petB BG259_15055 PF00032 Cytochrome b(C-terminal)/b6/petD BG259_15060 PF02167 Cytochrome C1 family BG259_15065 PF02798 Glutathione S-transferase, N-terminal domain BG259_15065 PF00043 Glutathione S-transferase, C-terminal domain BG259_15070 PF04386 Stringent starvation protein B BG259_15075 PF04972 BON domain BG259_15080 PF13580 SIS domain BG259_15085 PF02021 Uncharacterised protein family UPF0102 BG259_15090 PF04348 LppC putative lipoprotein BG259_15095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_15105 PF01795 MraW methylase family BG259_15110 PF04999 Cell division protein FtsL BG259_15115 PF03717 Penicillin-binding Protein dimerisation domain BG259_15115 PF00905 Penicillin binding protein transpeptidase domain BG259_15120 PF02875 Mur ligase family, glutamate ligase domain BG259_15120 PF01225 Mur ligase family, catalytic domain BG259_15120 PF08245 Mur ligase middle domain BG259_15125 PF01225 Mur ligase family, catalytic domain BG259_15125 PF02875 Mur ligase family, glutamate ligase domain BG259_15125 PF08245 Mur ligase middle domain BG259_15130 PF00953 Glycosyl transferase family 4 BG259_15130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BG259_15135 PF02875 Mur ligase family, glutamate ligase domain BG259_15135 PF08245 Mur ligase middle domain BG259_15140 PF01098 Cell cycle protein BG259_15145 PF03033 Glycosyltransferase family 28 N-terminal domain BG259_15145 PF04101 Glycosyltransferase family 28 C-terminal domain BG259_15150 PF01225 Mur ligase family, catalytic domain BG259_15150 PF02875 Mur ligase family, glutamate ligase domain BG259_15150 PF08245 Mur ligase middle domain BG259_15155 PF08478 POTRA domain, FtsQ-type BG259_15155 PF03799 Cell division protein FtsQ BG259_15160 PF02491 SHS2 domain inserted in FTSA BG259_15165 PF12327 FtsZ family, C-terminal domain BG259_15165 PF00091 Tubulin/FtsZ family, GTPase domain BG259_15170 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BG259_15175 PF01043 SecA preprotein cross-linking domain BG259_15175 PF07516 SecA Wing and Scaffold domain BG259_15175 PF02810 SEC-C motif BG259_15175 PF07517 SecA DEAD-like domain BG259_15180 PF00293 NUDIX domain BG259_15185 PF05173 Dihydrodipicolinate reductase, C-terminus BG259_15185 PF01113 Dihydrodipicolinate reductase, N-terminus BG259_15190 PF00117 Glutamine amidotransferase class-I BG259_15190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BG259_15195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BG259_15195 PF02142 MGS-like domain BG259_15195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG259_15215 PF01925 Sulfite exporter TauE/SafE BG259_15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_15220 PF03466 LysR substrate binding domain BG259_15225 PF03458 UPF0126 domain BG259_15230 PF01497 Periplasmic binding protein BG259_15240 PF01048 Phosphorylase superfamily BG259_15250 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_15250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BG259_15255 PF04898 Glutamate synthase central domain BG259_15255 PF01645 Conserved region in glutamate synthase BG259_15255 PF01493 GXGXG motif BG259_15255 PF00310 Glutamine amidotransferases class-II BG259_15260 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BG259_15260 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_15265 PF01493 GXGXG motif BG259_15265 PF04898 Glutamate synthase central domain BG259_15265 PF01645 Conserved region in glutamate synthase BG259_15265 PF00310 Glutamine amidotransferases class-II BG259_15270 PF16199 Radical_SAM C-terminal domain BG259_15270 PF04055 Radical SAM superfamily BG259_15275 PF00563 EAL domain BG259_15275 PF01590 GAF domain BG259_15275 PF00990 Diguanylate cyclase, GGDEF domain BG259_15275 PF00360 Phytochrome region BG259_15285 PF00512 His Kinase A (phospho-acceptor) domain BG259_15285 PF01627 Hpt domain BG259_15285 PF18415 Histidine kinase receptor ArcB trans-membrane domain BG259_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_15285 PF00072 Response regulator receiver domain BG259_15285 PF00989 PAS fold BG259_15295 PF00072 Response regulator receiver domain BG259_15295 PF00486 Transcriptional regulatory protein, C terminal BG259_15305 PF03737 Aldolase/RraA BG259_15315 PF03447 Homoserine dehydrogenase, NAD binding domain BG259_15315 PF00696 Amino acid kinase family BG259_15315 PF01842 ACT domain BG259_15315 PF13840 ACT domain BG259_15315 PF00742 Homoserine dehydrogenase BG259_15320 PF00288 GHMP kinases N terminal domain BG259_15320 PF08544 GHMP kinases C terminal BG259_15325 PF14821 Threonine synthase N terminus BG259_15325 PF00291 Pyridoxal-phosphate dependent enzyme BG259_15330 PF03358 NADPH-dependent FMN reductase BG259_15335 PF01228 Glycine radical BG259_15340 PF01261 Xylose isomerase-like TIM barrel BG259_15345 PF03167 Uracil DNA glycosylase superfamily BG259_15360 PF01235 Sodium:alanine symporter family BG259_15365 PF03883 Peroxide stress protein YaaA BG259_15375 PF00270 DEAD/DEAH box helicase BG259_15375 PF00271 Helicase conserved C-terminal domain BG259_15380 PF05175 Methyltransferase small domain BG259_15385 PF05525 Branched-chain amino acid transport protein BG259_15390 PF00258 Flavodoxin BG259_15395 PF00589 Phage integrase family BG259_15395 PF02899 Phage integrase, N-terminal SAM-like domain BG259_15400 PF10411 Disulfide bond isomerase protein N-terminus BG259_15400 PF13098 Thioredoxin-like domain BG259_15405 PF01368 DHH family BG259_15405 PF17768 RecJ OB domain BG259_15405 PF02272 DHHA1 domain BG259_15415 PF00152 tRNA synthetases class II (D, K and N) BG259_15415 PF01336 OB-fold nucleic acid binding domain BG259_15420 PF02954 Bacterial regulatory protein, Fis family BG259_15420 PF00072 Response regulator receiver domain BG259_15420 PF00158 Sigma-54 interaction domain BG259_15430 PF00248 Aldo/keto reductase family BG259_15440 PF02976 DNA mismatch repair enzyme MutH BG259_15445 PF00293 NUDIX domain BG259_15450 PF00391 PEP-utilising enzyme, mobile domain BG259_15450 PF02896 PEP-utilising enzyme, TIM barrel domain BG259_15450 PF05524 PEP-utilising enzyme, N-terminal BG259_15450 PF01590 GAF domain BG259_15455 PF01925 Sulfite exporter TauE/SafE BG259_15460 PF01790 Prolipoprotein diacylglyceryl transferase BG259_15465 PF00303 Thymidylate synthase BG259_15470 PF02690 Na+/Pi-cotransporter BG259_15475 PF03466 LysR substrate binding domain BG259_15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_15480 PF01022 Bacterial regulatory protein, arsR family BG259_15485 PF01649 Ribosomal protein S20 BG259_15490 PF03023 Lipid II flippase MurJ BG259_15495 PF01687 Riboflavin kinase BG259_15495 PF06574 FAD synthetase BG259_15500 PF08264 Anticodon-binding domain of tRNA BG259_15500 PF06827 Zinc finger found in FPG and IleRS BG259_15500 PF00133 tRNA synthetases class I (I, L, M and V) BG259_15505 PF01252 Signal peptidase (SPase) II BG259_15510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_15515 PF02401 LytB protein BG259_15520 PF04397 LytTr DNA-binding domain BG259_15520 PF00072 Response regulator receiver domain BG259_15525 PF07694 5TMR of 5TMR-LYT BG259_15525 PF06580 Histidine kinase BG259_15530 PF02554 Carbon starvation protein CstA BG259_15545 PF01380 SIS domain BG259_15550 PF03702 Anhydro-N-acetylmuramic acid kinase BG259_15555 PF00933 Glycosyl hydrolase family 3 N terminal domain BG259_15560 PF00793 DAHP synthetase I family BG259_15565 PF01817 Chorismate mutase type II BG259_15565 PF02153 Prephenate dehydrogenase BG259_15570 PF04225 Opacity-associated protein A LysM-like domain BG259_15570 PF01551 Peptidase family M23 BG259_15575 PF07238 PilZ domain BG259_15580 PF12848 ABC transporter BG259_15580 PF00005 ABC transporter BG259_15585 PF14718 Soluble lytic murein transglycosylase L domain BG259_15585 PF01464 Transglycosylase SLT domain BG259_15590 PF01371 Trp repressor protein BG259_15595 PF01931 Protein of unknown function DUF84 BG259_15600 PF01817 Chorismate mutase type II BG259_15600 PF00800 Prephenate dehydratase BG259_15605 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BG259_15610 PF01464 Transglycosylase SLT domain BG259_15615 PF13525 Outer membrane lipoprotein BG259_15620 PF01479 S4 domain BG259_15620 PF00849 RNA pseudouridylate synthase BG259_15630 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_15630 PF02861 Clp amino terminal domain, pathogenicity island component BG259_15630 PF07724 AAA domain (Cdc48 subfamily) BG259_15630 PF00004 ATPase family associated with various cellular activities (AAA) BG259_15630 PF17871 AAA lid domain BG259_15680 PF03411 Penicillin-insensitive murein endopeptidase BG259_15690 PF00037 4Fe-4S binding domain BG259_15700 PF04381 Putative exonuclease, RdgC BG259_15705 PF00072 Response regulator receiver domain BG259_15705 PF00486 Transcriptional regulatory protein, C terminal BG259_15710 PF11808 Phosphate regulon sensor protein PhoR BG259_15710 PF00989 PAS fold BG259_15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_15710 PF00512 His Kinase A (phospho-acceptor) domain BG259_15715 PF12849 PBP superfamily domain BG259_15720 PF02541 Ppx/GppA phosphatase family BG259_15725 PF02503 Polyphosphate kinase middle domain BG259_15725 PF13090 Polyphosphate kinase C-terminal domain 2 BG259_15725 PF17941 Polyphosphate kinase C-terminal domain 1 BG259_15725 PF13089 Polyphosphate kinase N-terminal domain BG259_15730 PF00528 Binding-protein-dependent transport system inner membrane component BG259_15735 PF00528 Binding-protein-dependent transport system inner membrane component BG259_15740 PF00005 ABC transporter BG259_15745 PF01895 PhoU domain BG259_15760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_15760 PF03466 LysR substrate binding domain BG259_15765 PF03976 Polyphosphate kinase 2 (PPK2) BG259_15770 PF03932 CutC family BG259_15775 PF00578 AhpC/TSA family BG259_15775 PF10417 C-terminal domain of 1-Cys peroxiredoxin BG259_15780 PF03466 LysR substrate binding domain BG259_15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_15785 PF01274 Malate synthase BG259_15790 PF00463 Isocitrate lyase family BG259_15795 PF00571 CBS domain BG259_15810 PF02547 Queuosine biosynthesis protein BG259_15815 PF01702 Queuine tRNA-ribosyltransferase BG259_15820 PF02699 Preprotein translocase subunit BG259_15825 PF02355 Protein export membrane protein BG259_15825 PF13721 SecD export protein N-terminal TM region BG259_15825 PF07549 SecD/SecF GG Motif BG259_15830 PF02355 Protein export membrane protein BG259_15830 PF07549 SecD/SecF GG Motif BG259_15845 PF00459 Inositol monophosphatase family BG259_15850 PF00588 SpoU rRNA Methylase family BG259_15855 PF02082 Transcriptional regulator BG259_15860 PF00266 Aminotransferase class-V BG259_15865 PF01592 NifU-like N terminal domain BG259_15870 PF01521 Iron-sulphur cluster biosynthesis BG259_15875 PF07743 HSCB C-terminal oligomerisation domain BG259_15875 PF00226 DnaJ domain BG259_15880 PF00012 Hsp70 protein BG259_15885 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_15890 PF04384 Iron-sulphur cluster assembly BG259_15895 PF12404 Peptidase BG259_15895 PF00883 Cytosol aminopeptidase family, catalytic domain BG259_15900 PF00334 Nucleoside diphosphate kinase BG259_15905 PF04055 Radical SAM superfamily BG259_15910 PF13464 Domain of unknown function (DUF4115) BG259_15915 PF04551 GcpE protein BG259_15920 PF13393 Histidyl-tRNA synthetase BG259_15920 PF03129 Anticodon binding domain BG259_15925 PF09976 Tetratricopeptide repeat-like domain BG259_15930 PF13360 PQQ-like domain BG259_15935 PF01926 50S ribosome-binding GTPase BG259_15935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BG259_15945 PF00990 Diguanylate cyclase, GGDEF domain BG259_15945 PF13185 GAF domain BG259_15955 PF13742 OB-fold nucleic acid binding domain BG259_15955 PF02601 Exonuclease VII, large subunit BG259_15960 PF00571 CBS domain BG259_15960 PF00478 IMP dehydrogenase / GMP reductase domain BG259_15965 PF02540 NAD synthase BG259_15965 PF00958 GMP synthase C terminal domain BG259_15965 PF00117 Glutamine amidotransferase class-I BG259_15970 PF03553 Na+/H+ antiporter family BG259_15975 PF00704 Glycosyl hydrolases family 18 BG259_15975 PF06483 Chitinase C BG259_15980 PF01184 GPR1/FUN34/yaaH family BG259_15985 PF01235 Sodium:alanine symporter family BG259_15990 PF01266 FAD dependent oxidoreductase BG259_15995 PF03466 LysR substrate binding domain BG259_15995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_16000 PF00924 Mechanosensitive ion channel BG259_16005 PF01053 Cys/Met metabolism PLP-dependent enzyme BG259_16010 PF01521 Iron-sulphur cluster biosynthesis BG259_16015 PF01458 Uncharacterized protein family (UPF0051) BG259_16020 PF00005 ABC transporter BG259_16025 PF01458 Uncharacterized protein family (UPF0051) BG259_16030 PF00266 Aminotransferase class-V BG259_16035 PF02657 Fe-S metabolism associated domain BG259_16045 PF00202 Aminotransferase class-III BG259_16065 PF12805 FUSC-like inner membrane protein yccS BG259_16070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_16070 PF03466 LysR substrate binding domain BG259_16095 PF06508 Queuosine biosynthesis protein QueC BG259_16115 PF01966 HD domain BG259_16115 PF13286 Phosphohydrolase-associated domain BG259_16130 PF01668 SmpB protein BG259_16135 PF03364 Polyketide cyclase / dehydrase and lipid transport BG259_16140 PF03658 RnfH family Ubiquitin BG259_16145 PF04355 SmpA / OmlA family BG259_16150 PF02463 RecF/RecN/SMC N terminal domain BG259_16160 PF01513 ATP-NAD kinase BG259_16165 PF01025 GrpE BG259_16170 PF00375 Sodium:dicarboxylate symporter family BG259_16180 PF00012 Hsp70 protein BG259_16185 PF00226 DnaJ domain BG259_16185 PF00684 DnaJ central domain BG259_16185 PF01556 DnaJ C terminal domain BG259_16190 PF07963 Prokaryotic N-terminal methylation motif BG259_16190 PF00114 Pilin (bacterial filament) BG259_16195 PF07963 Prokaryotic N-terminal methylation motif BG259_16195 PF00114 Pilin (bacterial filament) BG259_16215 PF03806 AbgT putative transporter family BG259_16220 PF14437 MafB19-like deaminase BG259_16225 PF01464 Transglycosylase SLT domain BG259_16225 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_16230 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BG259_16230 PF02769 AIR synthase related protein, C-terminal domain BG259_16230 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BG259_16245 PF00593 TonB dependent receptor BG259_16245 PF07715 TonB-dependent Receptor Plug Domain BG259_16260 PF01546 Peptidase family M20/M25/M40 BG259_16260 PF07687 Peptidase dimerisation domain BG259_16265 PF00860 Permease family BG259_16270 PF00156 Phosphoribosyl transferase domain BG259_16280 PF07417 Sigma factor-binding transcriptional regulator Crl BG259_16285 PF01472 PUA domain BG259_16285 PF00696 Amino acid kinase family BG259_16290 PF00171 Aldehyde dehydrogenase family BG259_16295 PF03477 ATP cone domain BG259_16300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG259_16300 PF01872 RibD C-terminal domain BG259_16305 PF00677 Lumazine binding domain BG259_16310 PF00925 GTP cyclohydrolase II BG259_16310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BG259_16315 PF00885 6,7-dimethyl-8-ribityllumazine synthase BG259_16320 PF01029 NusB family BG259_16325 PF00586 AIR synthase related protein, N-terminal domain BG259_16325 PF02769 AIR synthase related protein, C-terminal domain BG259_16330 PF04608 Phosphatidylglycerophosphatase A BG259_16335 PF02779 Transketolase, pyrimidine binding domain BG259_16335 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BG259_16335 PF02780 Transketolase, C-terminal domain BG259_16340 PF00348 Polyprenyl synthetase BG259_16345 PF02609 Exonuclease VII small subunit BG259_16350 PF01618 MotA/TolQ/ExbB proton channel family BG259_16355 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG259_16355 PF00691 OmpA family BG259_16355 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG259_16355 PF00691 OmpA family BG259_16360 PF02926 THUMP domain BG259_16360 PF02568 Thiamine biosynthesis protein (ThiI) BG259_16365 PF03466 LysR substrate binding domain BG259_16365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_16375 PF04241 Protein of unknown function (DUF423) BG259_16380 PF01728 FtsJ-like methyltransferase BG259_16380 PF18125 RlmM ferredoxin-like domain BG259_16385 PF01223 DNA/RNA non-specific endonuclease BG259_16390 PF01367 5'-3' exonuclease, C-terminal SAM fold BG259_16390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BG259_16395 PF03641 Possible lysine decarboxylase BG259_16395 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BG259_16395 PF11892 Domain of unknown function (DUF3412) BG259_16400 PF00990 Diguanylate cyclase, GGDEF domain BG259_16410 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BG259_16410 PF14489 QueF-like protein BG259_16415 PF07348 Syd protein (SUKH-2) BG259_16420 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BG259_16425 PF02872 5'-nucleotidase, C-terminal domain BG259_16425 PF00149 Calcineurin-like phosphoesterase BG259_16435 PF03180 NLPA lipoprotein BG259_16440 PF00528 Binding-protein-dependent transport system inner membrane component BG259_16445 PF09383 NIL domain BG259_16445 PF00005 ABC transporter BG259_16455 PF00356 Bacterial regulatory proteins, lacI family BG259_16460 PF00367 phosphotransferase system, EIIB BG259_16460 PF02378 Phosphotransferase system, EIIC BG259_16465 PF00128 Alpha amylase, catalytic domain BG259_16465 PF16657 Maltogenic Amylase, C-terminal domain BG259_16480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG259_16480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BG259_16485 PF00464 Serine hydroxymethyltransferase BG259_16490 PF04055 Radical SAM superfamily BG259_16490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BG259_16495 PF03099 Biotin/lipoate A/B protein ligase family BG259_16500 PF04359 Protein of unknown function (DUF493) BG259_16505 PF00768 D-alanyl-D-alanine carboxypeptidase BG259_16505 PF07943 Penicillin-binding protein 5, C-terminal domain BG259_16510 PF03330 Lytic transglycolase BG259_16510 PF05036 Sporulation related domain BG259_16515 PF01098 Cell cycle protein BG259_16520 PF00905 Penicillin binding protein transpeptidase domain BG259_16520 PF03717 Penicillin-binding Protein dimerisation domain BG259_16525 PF02590 Predicted SPOUT methyltransferase BG259_16535 PF06144 DNA polymerase III, delta subunit BG259_16535 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BG259_16540 PF04390 Lipopolysaccharide-assembly BG259_16545 PF08264 Anticodon-binding domain of tRNA BG259_16545 PF00133 tRNA synthetases class I (I, L, M and V) BG259_16545 PF13603 Leucyl-tRNA synthetase, Domain 2 BG259_16550 PF07295 Zinc-ribbon containing domain BG259_16555 PF00795 Carbon-nitrogen hydrolase BG259_16560 PF03471 Transporter associated domain BG259_16560 PF00571 CBS domain BG259_16565 PF02130 Uncharacterized protein family UPF0054 BG259_16570 PF02562 PhoH-like protein BG259_16575 PF01938 TRAM domain BG259_16575 PF04055 Radical SAM superfamily BG259_16575 PF00919 Uncharacterized protein family UPF0004 BG259_16580 PF01494 FAD binding domain BG259_16695 PF01926 50S ribosome-binding GTPase BG259_16695 PF06071 Protein of unknown function (DUF933) BG259_16700 PF01195 Peptidyl-tRNA hydrolase BG259_16705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BG259_16705 PF14572 Phosphoribosyl synthetase-associated domain BG259_16710 PF00288 GHMP kinases N terminal domain BG259_16710 PF08544 GHMP kinases C terminal BG259_16715 PF03550 Outer membrane lipoprotein LolB BG259_16720 PF01488 Shikimate / quinate 5-dehydrogenase BG259_16720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BG259_16720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BG259_16725 PF03462 PCRF domain BG259_16725 PF00472 RF-1 domain BG259_16730 PF13847 Methyltransferase domain BG259_16730 PF17827 PrmC N-terminal domain BG259_16735 PF04247 Invasion gene expression up-regulator, SirB BG259_16740 PF13369 Transglutaminase-like superfamily BG259_16745 PF00793 DAHP synthetase I family BG259_16750 PF02872 5'-nucleotidase, C-terminal domain BG259_16750 PF00149 Calcineurin-like phosphoesterase BG259_16755 PF04073 Aminoacyl-tRNA editing domain BG259_16760 PF00849 RNA pseudouridylate synthase BG259_16760 PF01479 S4 domain BG259_16765 PF01713 Smr domain BG259_16795 PF02838 Glycosyl hydrolase family 20, domain 2 BG259_16795 PF00728 Glycosyl hydrolase family 20, catalytic domain BG259_16795 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BG259_16795 PF03173 Putative carbohydrate binding domain BG259_16810 PF00403 Heavy-metal-associated domain BG259_16815 PF13609 Gram-negative porin BG259_16820 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BG259_16825 PF00749 tRNA synthetases class I (E and Q), catalytic domain BG259_16830 PF01389 OmpA-like transmembrane domain BG259_16830 PF00691 OmpA family BG259_16880 PF01584 CheW-like domain BG259_16880 PF00072 Response regulator receiver domain BG259_16885 PF01739 CheR methyltransferase, SAM binding domain BG259_16885 PF03705 CheR methyltransferase, all-alpha domain BG259_16890 PF00460 Flagella basal body rod protein BG259_16895 PF00460 Flagella basal body rod protein BG259_16895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_16900 PF13861 FlgD Tudor-like domain BG259_16900 PF13860 FlgD Ig-like domain BG259_16900 PF03963 Flagellar hook capping protein - N-terminal region BG259_16905 PF07559 Flagellar basal body protein FlaE BG259_16905 PF00460 Flagella basal body rod protein BG259_16905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_16910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_16910 PF00460 Flagella basal body rod protein BG259_16915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_16915 PF00460 Flagella basal body rod protein BG259_16920 PF02107 Flagellar L-ring protein BG259_16925 PF02119 Flagellar P-ring protein BG259_16930 PF10135 Rod binding protein BG259_16930 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BG259_16935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_16935 PF07196 Flagellin hook IN motif BG259_16945 PF07196 Flagellin hook IN motif BG259_16945 PF00700 Bacterial flagellin C-terminal helical region BG259_16945 PF00669 Bacterial flagellin N-terminal helical region BG259_16950 PF00700 Bacterial flagellin C-terminal helical region BG259_16950 PF07196 Flagellin hook IN motif BG259_16950 PF00669 Bacterial flagellin N-terminal helical region BG259_16955 PF07196 Flagellin hook IN motif BG259_16955 PF00669 Bacterial flagellin N-terminal helical region BG259_16955 PF00700 Bacterial flagellin C-terminal helical region BG259_16960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG259_16965 PF02896 PEP-utilising enzyme, TIM barrel domain BG259_16965 PF00391 PEP-utilising enzyme, mobile domain BG259_16965 PF05524 PEP-utilising enzyme, N-terminal BG259_16970 PF00381 PTS HPr component phosphorylation site BG259_16980 PF00291 Pyridoxal-phosphate dependent enzyme BG259_16990 PF04354 ZipA, C-terminal FtsZ-binding domain BG259_16995 PF00533 BRCA1 C Terminus (BRCT) domain BG259_16995 PF01653 NAD-dependent DNA ligase adenylation domain BG259_16995 PF03120 NAD-dependent DNA ligase OB-fold domain BG259_16995 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BG259_16995 PF12826 Helix-hairpin-helix motif BG259_17000 PF03573 outer membrane porin, OprD family BG259_17015 PF01145 SPFH domain / Band 7 family BG259_17015 PF16200 C-terminal region of band_7 BG259_17020 PF00085 Thioredoxin BG259_17030 PF00106 short chain dehydrogenase BG259_17035 PF08338 Domain of unknown function (DUF1731) BG259_17035 PF01370 NAD dependent epimerase/dehydratase family BG259_17040 PF07556 Protein of unknown function (DUF1538) BG259_17045 PF07556 Protein of unknown function (DUF1538) BG259_17065 PF12850 Calcineurin-like phosphoesterase superfamily domain BG259_17080 PF17323 Trans-membrane regulatory protein ToxS BG259_17085 PF00486 Transcriptional regulatory protein, C terminal BG259_17090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_17090 PF00183 Hsp90 protein BG259_17095 PF05191 Adenylate kinase, active site lid BG259_17100 PF00762 Ferrochelatase BG259_17105 PF00854 POT family BG259_17110 PF02357 Transcription termination factor nusG BG259_17115 PF00733 Asparagine synthase BG259_17115 PF13537 Glutamine amidotransferase domain BG259_17120 PF02254 TrkA-N domain BG259_17120 PF00999 Sodium/hydrogen exchanger family BG259_17125 PF00480 ROK family BG259_17125 PF01047 MarR family BG259_17130 PF01979 Amidohydrolase family BG259_17135 PF00367 phosphotransferase system, EIIB BG259_17135 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BG259_17135 PF02378 Phosphotransferase system, EIIC BG259_17215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BG259_17215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BG259_17220 PF05025 RbsD / FucU transport protein family BG259_17225 PF00596 Class II Aldolase and Adducin N-terminal domain BG259_17230 PF00465 Iron-containing alcohol dehydrogenase BG259_17235 PF01734 Patatin-like phospholipase BG259_17245 PF02469 Fasciclin domain BG259_17250 PF00875 DNA photolyase BG259_17250 PF03441 FAD binding domain of DNA photolyase BG259_17265 PF03477 ATP cone domain BG259_17265 PF02867 Ribonucleotide reductase, barrel domain BG259_17265 PF00317 Ribonucleotide reductase, all-alpha domain BG259_17270 PF00268 Ribonucleotide reductase, small chain BG259_17290 PF01809 Putative membrane protein insertion efficiency factor BG259_17300 PF00561 alpha/beta hydrolase fold BG259_17305 PF00768 D-alanyl-D-alanine carboxypeptidase BG259_17305 PF07943 Penicillin-binding protein 5, C-terminal domain BG259_17310 PF00128 Alpha amylase, catalytic domain BG259_17310 PF00686 Starch binding domain BG259_17320 PF00881 Nitroreductase family BG259_17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17330 PF03466 LysR substrate binding domain BG259_17335 PF09905 DNA-binding protein VF530 BG259_17345 PF00175 Oxidoreductase NAD-binding domain BG259_17345 PF00970 Oxidoreductase FAD-binding domain BG259_17360 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BG259_17365 PF01594 AI-2E family transporter BG259_17375 PF13533 Biotin-lipoyl like BG259_17395 PF00892 EamA-like transporter family BG259_17405 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BG259_17410 PF03466 LysR substrate binding domain BG259_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17430 PF03466 LysR substrate binding domain BG259_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17435 PF07690 Major Facilitator Superfamily BG259_17445 PF00113 Enolase, C-terminal TIM barrel domain BG259_17445 PF03952 Enolase, N-terminal domain BG259_17450 PF00583 Acetyltransferase (GNAT) family BG259_17460 PF00072 Response regulator receiver domain BG259_17460 PF00486 Transcriptional regulatory protein, C terminal BG259_17465 PF00672 HAMP domain BG259_17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_17465 PF00512 His Kinase A (phospho-acceptor) domain BG259_17480 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG259_17485 PF04055 Radical SAM superfamily BG259_17500 PF12833 Helix-turn-helix domain BG259_17500 PF17853 GGDEF-like domain BG259_17505 PF12833 Helix-turn-helix domain BG259_17505 PF12852 Cupin BG259_17510 PF00561 alpha/beta hydrolase fold BG259_17525 PF13344 Haloacid dehalogenase-like hydrolase BG259_17525 PF00293 NUDIX domain BG259_17545 PF02322 Cytochrome bd terminal oxidase subunit II BG259_17550 PF01654 Cytochrome bd terminal oxidase subunit I BG259_17565 PF05114 Protein of unknown function (DUF692) BG259_17580 PF02567 Phenazine biosynthesis-like protein BG259_17585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_17600 PF00005 ABC transporter BG259_17600 PF12848 ABC transporter BG259_17605 PF09905 DNA-binding protein VF530 BG259_17610 PF03466 LysR substrate binding domain BG259_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17615 PF03358 NADPH-dependent FMN reductase BG259_17620 PF13409 Glutathione S-transferase, N-terminal domain BG259_17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17640 PF03466 LysR substrate binding domain BG259_17645 PF13977 BetI-type transcriptional repressor, C-terminal BG259_17645 PF00440 Bacterial regulatory proteins, tetR family BG259_17660 PF00581 Rhodanese-like domain BG259_17665 PF01810 LysE type translocator BG259_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17670 PF03466 LysR substrate binding domain BG259_17680 PF07971 Glycosyl hydrolase family 92 BG259_17680 PF17678 Glycosyl hydrolase family 92 N-terminal domain BG259_17685 PF17678 Glycosyl hydrolase family 92 N-terminal domain BG259_17685 PF07971 Glycosyl hydrolase family 92 BG259_17695 PF07971 Glycosyl hydrolase family 92 BG259_17695 PF17678 Glycosyl hydrolase family 92 N-terminal domain BG259_17700 PF17678 Glycosyl hydrolase family 92 N-terminal domain BG259_17700 PF07971 Glycosyl hydrolase family 92 BG259_17715 PF01625 Peptide methionine sulfoxide reductase BG259_17715 PF01641 SelR domain BG259_17720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_17725 PF00455 DeoR C terminal sensor domain BG259_17725 PF08220 DeoR-like helix-turn-helix domain BG259_17730 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG259_17730 PF00356 Bacterial regulatory proteins, lacI family BG259_17735 PF02378 Phosphotransferase system, EIIC BG259_17735 PF00367 phosphotransferase system, EIIB BG259_17740 PF00155 Aminotransferase class I and II BG259_17745 PF01238 Phosphomannose isomerase type I BG259_17765 PF00199 Catalase BG259_17765 PF06628 Catalase-related immune-responsive BG259_17775 PF00080 Copper/zinc superoxide dismutase (SODC) BG259_17780 PF00857 Isochorismatase family BG259_17790 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BG259_17790 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BG259_17805 PF06942 GlpM protein BG259_17830 PF03466 LysR substrate binding domain BG259_17830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17855 PF00571 CBS domain BG259_17855 PF00005 ABC transporter BG259_17860 PF00528 Binding-protein-dependent transport system inner membrane component BG259_17870 PF02001 Protein of unknown function DUF134 BG259_17890 PF00679 Elongation factor G C-terminus BG259_17890 PF03144 Elongation factor Tu domain 2 BG259_17890 PF14492 Elongation Factor G, domain II BG259_17890 PF03764 Elongation factor G, domain IV BG259_17890 PF00009 Elongation factor Tu GTP binding domain BG259_17900 PF13378 Enolase C-terminal domain-like BG259_17900 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG259_17910 PF03466 LysR substrate binding domain BG259_17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17915 PF00924 Mechanosensitive ion channel BG259_17925 PF01070 FMN-dependent dehydrogenase BG259_17935 PF02652 L-lactate permease BG259_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_17940 PF03466 LysR substrate binding domain BG259_17945 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BG259_17945 PF00326 Prolyl oligopeptidase family BG259_17950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_17950 PF00005 ABC transporter BG259_17960 PF05362 Lon protease (S16) C-terminal proteolytic domain BG259_17960 PF13654 AAA domain BG259_17965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_17965 PF12729 Four helix bundle sensory module for signal transduction BG259_17965 PF00672 HAMP domain BG259_17970 PF12729 Four helix bundle sensory module for signal transduction BG259_17970 PF00672 HAMP domain BG259_17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_17975 PF07238 PilZ domain BG259_17975 PF12945 Flagellar protein YcgR BG259_17990 PF13302 Acetyltransferase (GNAT) domain BG259_17995 PF12800 4Fe-4S binding domain BG259_17995 PF12838 4Fe-4S dicluster domain BG259_18000 PF12801 4Fe-4S binding domain BG259_18000 PF12837 4Fe-4S binding domain BG259_18005 PF01022 Bacterial regulatory protein, arsR family BG259_18020 PF00005 ABC transporter BG259_18020 PF12558 ATP-binding cassette cobalt transporter BG259_18025 PF07155 ECF-type riboflavin transporter, S component BG259_18030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_18030 PF00529 HlyD membrane-fusion protein of T1SS BG259_18035 PF11742 Protein of unknown function (DUF3302) BG259_18045 PF00990 Diguanylate cyclase, GGDEF domain BG259_18060 PF01048 Phosphorylase superfamily BG259_18065 PF08349 Protein of unknown function (DUF1722) BG259_18070 PF13411 MerR HTH family regulatory protein BG259_18075 PF03441 FAD binding domain of DNA photolyase BG259_18075 PF00875 DNA photolyase BG259_18080 PF03734 L,D-transpeptidase catalytic domain BG259_18080 PF17969 L,D-transpeptidase C-terminal domain BG259_18080 PF01476 LysM domain BG259_18090 PF00270 DEAD/DEAH box helicase BG259_18090 PF00271 Helicase conserved C-terminal domain BG259_18100 PF00672 HAMP domain BG259_18100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_18100 PF02743 Cache domain BG259_18105 PF12849 PBP superfamily domain BG259_18110 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18115 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18120 PF00005 ABC transporter BG259_18135 PF13519 von Willebrand factor type A domain BG259_18140 PF13519 von Willebrand factor type A domain BG259_18150 PF01882 Protein of unknown function DUF58 BG259_18155 PF17863 AAA lid domain BG259_18155 PF07726 ATPase family associated with various cellular activities (AAA) BG259_18160 PF02743 Cache domain BG259_18160 PF00672 HAMP domain BG259_18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_18170 PF00196 Bacterial regulatory proteins, luxR family BG259_18175 PF00196 Bacterial regulatory proteins, luxR family BG259_18185 PF00005 ABC transporter BG259_18185 PF00664 ABC transporter transmembrane region BG259_18190 PF00529 HlyD membrane-fusion protein of T1SS BG259_18195 PF14602 Hexapeptide repeat of succinyl-transferase BG259_18195 PF12464 Maltose acetyltransferase BG259_18200 PF01966 HD domain BG259_18200 PF00072 Response regulator receiver domain BG259_18205 PF00512 His Kinase A (phospho-acceptor) domain BG259_18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_18210 PF12849 PBP superfamily domain BG259_18215 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18220 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18225 PF00005 ABC transporter BG259_18250 PF00563 EAL domain BG259_18250 PF00990 Diguanylate cyclase, GGDEF domain BG259_18250 PF03707 Bacterial signalling protein N terminal repeat BG259_18255 PF02378 Phosphotransferase system, EIIC BG259_18260 PF00127 Copper binding proteins, plastocyanin/azurin family BG259_18270 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_18275 PF00375 Sodium:dicarboxylate symporter family BG259_18285 PF00106 short chain dehydrogenase BG259_18350 PF01872 RibD C-terminal domain BG259_18355 PF00440 Bacterial regulatory proteins, tetR family BG259_18355 PF02909 Tetracyclin repressor-like, C-terminal domain BG259_18360 PF02798 Glutathione S-transferase, N-terminal domain BG259_18365 PF03466 LysR substrate binding domain BG259_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_18370 PF02525 Flavodoxin-like fold BG259_18375 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_18385 PF07943 Penicillin-binding protein 5, C-terminal domain BG259_18385 PF00768 D-alanyl-D-alanine carboxypeptidase BG259_18390 PF00990 Diguanylate cyclase, GGDEF domain BG259_18390 PF08448 PAS fold BG259_18400 PF08241 Methyltransferase domain BG259_18405 PF08534 Redoxin BG259_18405 PF00462 Glutaredoxin BG259_18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_18420 PF03466 LysR substrate binding domain BG259_18425 PF00990 Diguanylate cyclase, GGDEF domain BG259_18425 PF17151 Periplasmic sensor domain BG259_18430 PF00962 Adenosine/AMP deaminase BG259_18445 PF00313 'Cold-shock' DNA-binding domain BG259_18450 PF02678 Pirin BG259_18450 PF05726 Pirin C-terminal cupin domain BG259_18460 PF01734 Patatin-like phospholipase BG259_18470 PF01979 Amidohydrolase family BG259_18475 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_18480 PF07683 Cobalamin synthesis protein cobW C-terminal domain BG259_18480 PF02492 CobW/HypB/UreG, nucleotide-binding domain BG259_18495 PF01047 MarR family BG259_18510 PF17912 MalK OB fold domain BG259_18510 PF00005 ABC transporter BG259_18515 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18520 PF00528 Binding-protein-dependent transport system inner membrane component BG259_18525 PF13416 Bacterial extracellular solute-binding protein BG259_18530 PF03009 Glycerophosphoryl diester phosphodiesterase family BG259_18535 PF08220 DeoR-like helix-turn-helix domain BG259_18535 PF00455 DeoR C terminal sensor domain BG259_18545 PF00582 Universal stress protein family BG259_18565 PF01980 tRNA-methyltransferase O BG259_18570 PF00005 ABC transporter BG259_18570 PF16326 ABC transporter C-terminal domain BG259_18570 PF12848 ABC transporter BG259_18575 PF00326 Prolyl oligopeptidase family BG259_18575 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BG259_18585 PF13302 Acetyltransferase (GNAT) domain BG259_18590 PF03150 Di-haem cytochrome c peroxidase BG259_18590 PF14376 Haem-binding domain BG259_18590 PF00034 Cytochrome c BG259_18600 PF00293 NUDIX domain BG259_18615 PF02472 Biopolymer transport protein ExbD/TolR BG259_18620 PF01618 MotA/TolQ/ExbB proton channel family BG259_18625 PF01618 MotA/TolQ/ExbB proton channel family BG259_18635 PF07715 TonB-dependent Receptor Plug Domain BG259_18640 PF00005 ABC transporter BG259_18640 PF06472 ABC transporter transmembrane region 2 BG259_18645 PF05193 Peptidase M16 inactive domain BG259_18645 PF00675 Insulinase (Peptidase family M16) BG259_18665 PF00583 Acetyltransferase (GNAT) family BG259_18665 PF13673 Acetyltransferase (GNAT) domain BG259_18675 PF03543 Yersinia/Haemophilus virulence surface antigen BG259_18680 PF14765 Polyketide synthase dehydratase BG259_18680 PF00698 Acyl transferase domain BG259_18680 PF00550 Phosphopantetheine attachment site BG259_18680 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_18680 PF08659 KR domain BG259_18680 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_18680 PF16197 Ketoacyl-synthetase C-terminal extension BG259_18680 PF08240 Alcohol dehydrogenase GroES-like domain BG259_18705 PF00873 AcrB/AcrD/AcrF family BG259_18725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG259_18725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG259_18725 PF01568 Molydopterin dinucleotide binding domain BG259_18725 PF00384 Molybdopterin oxidoreductase BG259_18725 PF12838 4Fe-4S dicluster domain BG259_18740 PF02685 Glucokinase BG259_18740 PF01418 Helix-turn-helix domain, rpiR family BG259_18740 PF01380 SIS domain BG259_18750 PF07969 Amidohydrolase family BG259_18760 PF00474 Sodium:solute symporter family BG259_18765 PF00294 pfkB family carbohydrate kinase BG259_18770 PF01081 KDPG and KHG aldolase BG259_18775 PF02838 Glycosyl hydrolase family 20, domain 2 BG259_18775 PF00728 Glycosyl hydrolase family 20, catalytic domain BG259_18780 PF10282 Lactonase, 7-bladed beta-propeller BG259_18785 PF01042 Endoribonuclease L-PSP BG259_18795 PF00005 ABC transporter BG259_18805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_18805 PF17200 Single Cache domain 2 BG259_18805 PF00672 HAMP domain BG259_18810 PF00005 ABC transporter BG259_18815 PF01032 FecCD transport family BG259_18825 PF02472 Biopolymer transport protein ExbD/TolR BG259_18830 PF01618 MotA/TolQ/ExbB proton channel family BG259_18835 PF03544 Gram-negative bacterial TonB protein C-terminal BG259_18840 PF04055 Radical SAM superfamily BG259_18845 PF06228 Haem utilisation ChuX/HutX BG259_18850 PF01243 Pyridoxamine 5'-phosphate oxidase BG259_18860 PF00072 Response regulator receiver domain BG259_18860 PF01584 CheW-like domain BG259_18880 PF00128 Alpha amylase, catalytic domain BG259_18885 PF08659 KR domain BG259_18885 PF00550 Phosphopantetheine attachment site BG259_18885 PF14765 Polyketide synthase dehydratase BG259_18885 PF16197 Ketoacyl-synthetase C-terminal extension BG259_18885 PF00109 Beta-ketoacyl synthase, N-terminal domain BG259_18885 PF00107 Zinc-binding dehydrogenase BG259_18885 PF08240 Alcohol dehydrogenase GroES-like domain BG259_18885 PF00698 Acyl transferase domain BG259_18885 PF02801 Beta-ketoacyl synthase, C-terminal domain BG259_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_18905 PF03466 LysR substrate binding domain BG259_18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_18935 PF03466 LysR substrate binding domain BG259_18945 PF00999 Sodium/hydrogen exchanger family BG259_18945 PF02254 TrkA-N domain BG259_18950 PF02525 Flavodoxin-like fold BG259_18955 PF02567 Phenazine biosynthesis-like protein BG259_18960 PF01161 Phosphatidylethanolamine-binding protein BG259_18975 PF01758 Sodium Bile acid symporter family BG259_18990 PF01638 HxlR-like helix-turn-helix BG259_19000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_19005 PF01238 Phosphomannose isomerase type I BG259_19010 PF01074 Glycosyl hydrolases family 38 N-terminal domain BG259_19010 PF07748 Glycosyl hydrolases family 38 C-terminal domain BG259_19010 PF09261 Alpha mannosidase middle domain BG259_19015 PF02378 Phosphotransferase system, EIIC BG259_19015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_19015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_19020 PF07702 UTRA domain BG259_19020 PF00392 Bacterial regulatory proteins, gntR family BG259_19025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_19030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_19030 PF02378 Phosphotransferase system, EIIC BG259_19035 PF00107 Zinc-binding dehydrogenase BG259_19035 PF08240 Alcohol dehydrogenase GroES-like domain BG259_19070 PF03222 Tryptophan/tyrosine permease family BG259_19080 PF00672 HAMP domain BG259_19080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_19080 PF02743 Cache domain BG259_19105 PF08525 Opacity-associated protein A N-terminal motif BG259_19105 PF01551 Peptidase family M23 BG259_19105 PF01476 LysM domain BG259_19110 PF00990 Diguanylate cyclase, GGDEF domain BG259_19110 PF00563 EAL domain BG259_19110 PF08448 PAS fold BG259_19110 PF08447 PAS fold BG259_19115 PF03466 LysR substrate binding domain BG259_19115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_19120 PF07690 Major Facilitator Superfamily BG259_19130 PF00462 Glutaredoxin BG259_19135 PF00892 EamA-like transporter family BG259_19150 PF01557 Fumarylacetoacetate (FAA) hydrolase family BG259_19170 PF01810 LysE type translocator BG259_19180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BG259_19180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BG259_19180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BG259_19180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BG259_19185 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BG259_19185 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BG259_19190 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG259_19195 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BG259_19200 PF00510 Cytochrome c oxidase subunit III BG259_19220 PF02628 Cytochrome oxidase assembly protein BG259_19225 PF01040 UbiA prenyltransferase family BG259_19230 PF00691 OmpA family BG259_19230 PF01389 OmpA-like transmembrane domain BG259_19235 PF00793 DAHP synthetase I family BG259_19240 PF07690 Major Facilitator Superfamily BG259_19245 PF00672 HAMP domain BG259_19245 PF12729 Four helix bundle sensory module for signal transduction BG259_19245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_19250 PF02779 Transketolase, pyrimidine binding domain BG259_19250 PF00456 Transketolase, thiamine diphosphate binding domain BG259_19250 PF02780 Transketolase, C-terminal domain BG259_19255 PF00923 Transaldolase/Fructose-6-phosphate aldolase BG259_19270 PF00704 Glycosyl hydrolases family 18 BG259_19270 PF08329 Chitinase A, N-terminal domain BG259_19275 PF00990 Diguanylate cyclase, GGDEF domain BG259_19275 PF00563 EAL domain BG259_19275 PF03707 Bacterial signalling protein N terminal repeat BG259_19280 PF00581 Rhodanese-like domain BG259_19300 PF00899 ThiF family BG259_19305 PF03454 MoeA C-terminal region (domain IV) BG259_19305 PF03453 MoeA N-terminal region (domain I and II) BG259_19305 PF00994 Probable molybdopterin binding domain BG259_19310 PF01227 GTP cyclohydrolase I BG259_19320 PF01566 Natural resistance-associated macrophage protein BG259_19330 PF00654 Voltage gated chloride channel BG259_19345 PF00248 Aldo/keto reductase family BG259_19350 PF00072 Response regulator receiver domain BG259_19360 PF01256 Carbohydrate kinase BG259_19360 PF03853 YjeF-related protein N-terminus BG259_19365 PF00478 IMP dehydrogenase / GMP reductase domain BG259_19375 PF12146 Serine aminopeptidase, S33 BG259_19380 PF03466 LysR substrate binding domain BG259_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_19400 PF13629 Pilus formation protein N terminal region BG259_19400 PF04972 BON domain BG259_19400 PF00263 Bacterial type II and III secretion system protein BG259_19410 PF10609 NUBPL iron-transfer P-loop NTPase BG259_19415 PF00437 Type II/IV secretion system protein BG259_19450 PF00691 OmpA family BG259_19450 PF13488 Glycine zipper BG259_19480 PF01553 Acyltransferase BG259_19505 PF00990 Diguanylate cyclase, GGDEF domain BG259_19505 PF07694 5TMR of 5TMR-LYT BG259_19515 PF13977 BetI-type transcriptional repressor, C-terminal BG259_19515 PF00440 Bacterial regulatory proteins, tetR family BG259_19520 PF00171 Aldehyde dehydrogenase family BG259_19525 PF05199 GMC oxidoreductase BG259_19525 PF00732 GMC oxidoreductase BG259_19530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BG259_19535 PF00528 Binding-protein-dependent transport system inner membrane component BG259_19540 PF00571 CBS domain BG259_19540 PF00005 ABC transporter BG259_19545 PF00881 Nitroreductase family BG259_19555 PF01145 SPFH domain / Band 7 family BG259_19555 PF16200 C-terminal region of band_7 BG259_19575 PF03707 Bacterial signalling protein N terminal repeat BG259_19575 PF00563 EAL domain BG259_19575 PF00990 Diguanylate cyclase, GGDEF domain BG259_19580 PF09456 RcsC Alpha-Beta-Loop (ABL) BG259_19580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_19580 PF00512 His Kinase A (phospho-acceptor) domain BG259_19580 PF00072 Response regulator receiver domain BG259_19585 PF03150 Di-haem cytochrome c peroxidase BG259_19585 PF00034 Cytochrome c BG259_19590 PF00512 His Kinase A (phospho-acceptor) domain BG259_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_19590 PF09308 LuxQ, periplasmic BG259_19590 PF00072 Response regulator receiver domain BG259_19605 PF04116 Fatty acid hydroxylase superfamily BG259_19635 PF09335 SNARE associated Golgi protein BG259_19660 PF01177 Asp/Glu/Hydantoin racemase BG259_19665 PF01048 Phosphorylase superfamily BG259_19670 PF00990 Diguanylate cyclase, GGDEF domain BG259_19670 PF00563 EAL domain BG259_19675 PF05025 RbsD / FucU transport protein family BG259_19680 PF00005 ABC transporter BG259_19685 PF02653 Branched-chain amino acid transport system / permease component BG259_19690 PF13407 Periplasmic binding protein domain BG259_19695 PF00294 pfkB family carbohydrate kinase BG259_19700 PF00356 Bacterial regulatory proteins, lacI family BG259_19710 PF04973 Nicotinamide mononucleotide transporter BG259_19715 PF01048 Phosphorylase superfamily BG259_19730 PF01497 Periplasmic binding protein BG259_19735 PF01032 FecCD transport family BG259_19740 PF01032 FecCD transport family BG259_19745 PF00005 ABC transporter BG259_19750 PF13411 MerR HTH family regulatory protein BG259_19760 PF00593 TonB dependent receptor BG259_19760 PF07715 TonB-dependent Receptor Plug Domain BG259_19775 PF01470 Pyroglutamyl peptidase BG259_19785 PF02492 CobW/HypB/UreG, nucleotide-binding domain BG259_19785 PF07683 Cobalamin synthesis protein cobW C-terminal domain BG259_19790 PF00563 EAL domain BG259_19790 PF00990 Diguanylate cyclase, GGDEF domain BG259_19790 PF05231 MASE1 BG259_19790 PF08447 PAS fold BG259_19790 PF08448 PAS fold BG259_19790 PF13426 PAS domain BG259_19795 PF00271 Helicase conserved C-terminal domain BG259_19795 PF00270 DEAD/DEAH box helicase BG259_19815 PF12792 CSS motif domain associated with EAL BG259_19815 PF00563 EAL domain BG259_19820 PF00005 ABC transporter BG259_19825 PF00892 EamA-like transporter family BG259_19830 PF08534 Redoxin BG259_19835 PF08534 Redoxin BG259_19840 PF00072 Response regulator receiver domain BG259_19840 PF00486 Transcriptional regulatory protein, C terminal BG259_19845 PF16527 Two-component sensor protein CpxA, periplasmic domain BG259_19845 PF00512 His Kinase A (phospho-acceptor) domain BG259_19845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_19845 PF00672 HAMP domain BG259_19855 PF01575 MaoC like domain BG259_19860 PF12849 PBP superfamily domain BG259_19870 PF12833 Helix-turn-helix domain BG259_19875 PF00773 RNB domain BG259_19875 PF08206 Ribonuclease B OB domain BG259_19875 PF00575 S1 RNA binding domain BG259_19880 PF00271 Helicase conserved C-terminal domain BG259_19880 PF00270 DEAD/DEAH box helicase BG259_19880 PF03880 DbpA RNA binding domain BG259_19885 PF00563 EAL domain BG259_19885 PF03707 Bacterial signalling protein N terminal repeat BG259_19885 PF00990 Diguanylate cyclase, GGDEF domain BG259_19890 PF00871 Acetokinase family BG259_19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_19895 PF03466 LysR substrate binding domain BG259_19905 PF00171 Aldehyde dehydrogenase family BG259_19915 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_19945 PF02743 Cache domain BG259_19945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_19945 PF00672 HAMP domain BG259_19950 PF00005 ABC transporter BG259_19955 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_19960 PF00528 Binding-protein-dependent transport system inner membrane component BG259_19965 PF00528 Binding-protein-dependent transport system inner membrane component BG259_19975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_19975 PF03466 LysR substrate binding domain BG259_19980 PF00043 Glutathione S-transferase, C-terminal domain BG259_19980 PF13417 Glutathione S-transferase, N-terminal domain BG259_19995 PF00072 Response regulator receiver domain BG259_19995 PF00486 Transcriptional regulatory protein, C terminal BG259_20000 PF00989 PAS fold BG259_20000 PF16736 Single Cache-like BG259_20000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_20000 PF00512 His Kinase A (phospho-acceptor) domain BG259_20005 PF03358 NADPH-dependent FMN reductase BG259_20005 PF04205 FMN-binding domain BG259_20005 PF00890 FAD binding domain BG259_20010 PF02424 ApbE family BG259_20020 PF01012 Electron transfer flavoprotein domain BG259_20025 PF01012 Electron transfer flavoprotein domain BG259_20025 PF00766 Electron transfer flavoprotein FAD-binding domain BG259_20030 PF00364 Biotin-requiring enzyme BG259_20030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BG259_20030 PF02817 e3 binding domain BG259_20035 PF02779 Transketolase, pyrimidine binding domain BG259_20035 PF02780 Transketolase, C-terminal domain BG259_20040 PF00676 Dehydrogenase E1 component BG259_20055 PF00012 Hsp70 protein BG259_20060 PF04314 Copper chaperone PCu(A)C BG259_20090 PF00072 Response regulator receiver domain BG259_20090 PF00486 Transcriptional regulatory protein, C terminal BG259_20105 PF00245 Alkaline phosphatase BG259_20115 PF00082 Subtilase family BG259_20115 PF01483 Proprotein convertase P-domain BG259_20125 PF00990 Diguanylate cyclase, GGDEF domain BG259_20125 PF08448 PAS fold BG259_20130 PF03222 Tryptophan/tyrosine permease family BG259_20135 PF08448 PAS fold BG259_20135 PF00563 EAL domain BG259_20135 PF00990 Diguanylate cyclase, GGDEF domain BG259_20140 PF00583 Acetyltransferase (GNAT) family BG259_20145 PF01568 Molydopterin dinucleotide binding domain BG259_20145 PF00384 Molybdopterin oxidoreductase BG259_20145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG259_20150 PF14824 Sirohaem biosynthesis protein central BG259_20150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_20150 PF10414 Sirohaem synthase dimerisation region BG259_20155 PF02885 Glycosyl transferase family, helical bundle domain BG259_20155 PF00591 Glycosyl transferase family, a/b domain BG259_20160 PF01738 Dienelactone hydrolase family BG259_20165 PF08376 Nitrate and nitrite sensing BG259_20165 PF03861 ANTAR domain BG259_20175 PF00005 ABC transporter BG259_20180 PF00528 Binding-protein-dependent transport system inner membrane component BG259_20185 PF00005 ABC transporter BG259_20190 PF04324 BFD-like [2Fe-2S] binding domain BG259_20190 PF13806 Rieske-like [2Fe-2S] domain BG259_20190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG259_20190 PF18267 Rubredoxin NAD+ reductase C-terminal domain BG259_20190 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_20190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG259_20220 PF00211 Adenylate and Guanylate cyclase catalytic domain BG259_20220 PF00072 Response regulator receiver domain BG259_20235 PF03466 LysR substrate binding domain BG259_20235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_20240 PF01551 Peptidase family M23 BG259_20240 PF08525 Opacity-associated protein A N-terminal motif BG259_20240 PF01476 LysM domain BG259_20250 PF01292 Prokaryotic cytochrome b561 BG259_20260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_20260 PF00672 HAMP domain BG259_20260 PF02743 Cache domain BG259_20270 PF12464 Maltose acetyltransferase BG259_20270 PF14602 Hexapeptide repeat of succinyl-transferase BG259_20275 PF01594 AI-2E family transporter BG259_20280 PF00378 Enoyl-CoA hydratase/isomerase BG259_20285 PF00990 Diguanylate cyclase, GGDEF domain BG259_20285 PF00072 Response regulator receiver domain BG259_20365 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BG259_20370 PF00753 Metallo-beta-lactamase superfamily BG259_20380 PF13187 4Fe-4S dicluster domain BG259_20380 PF01645 Conserved region in glutamate synthase BG259_20400 PF01757 Acyltransferase family BG259_20410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG259_20415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_20440 PF03793 PASTA domain BG259_20440 PF00069 Protein kinase domain BG259_20460 PF00691 OmpA family BG259_20460 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG259_20520 PF07724 AAA domain (Cdc48 subfamily) BG259_20520 PF17871 AAA lid domain BG259_20520 PF00004 ATPase family associated with various cellular activities (AAA) BG259_20520 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_20530 PF04717 Type VI secretion system, phage-baseplate injector BG259_20545 PF03527 RHS protein BG259_20570 PF12320 Type 5 capsule protein repressor C-terminal domain BG259_20570 PF00149 Calcineurin-like phosphoesterase BG259_20575 PF13476 AAA domain BG259_20585 PF00704 Glycosyl hydrolases family 18 BG259_20615 PF08212 Lipocalin-like domain BG259_20625 PF07690 Major Facilitator Superfamily BG259_20635 PF03606 C4-dicarboxylate anaerobic carrier BG259_20640 PF00034 Cytochrome c BG259_20645 PF01212 Beta-eliminating lyase BG259_20655 PF12592 Protein of unknown function (DUF3763) BG259_20655 PF17868 AAA lid domain BG259_20655 PF07728 AAA domain (dynein-related subfamily) BG259_20660 PF05762 VWA domain containing CoxE-like protein BG259_20670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_20670 PF03466 LysR substrate binding domain BG259_20675 PF01565 FAD binding domain BG259_20675 PF09330 D-lactate dehydrogenase, membrane binding BG259_20695 PF00128 Alpha amylase, catalytic domain BG259_20695 PF09154 Domain of unknown function (DUF1939) BG259_20710 PF00672 HAMP domain BG259_20710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_20740 PF00563 EAL domain BG259_20740 PF13426 PAS domain BG259_20740 PF00990 Diguanylate cyclase, GGDEF domain BG259_20745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG259_20745 PF18267 Rubredoxin NAD+ reductase C-terminal domain BG259_20745 PF04324 BFD-like [2Fe-2S] binding domain BG259_20745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG259_20745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_20750 PF13806 Rieske-like [2Fe-2S] domain BG259_20755 PF01226 Formate/nitrite transporter BG259_20760 PF10414 Sirohaem synthase dimerisation region BG259_20760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_20760 PF14824 Sirohaem biosynthesis protein central BG259_20775 PF03605 Anaerobic c4-dicarboxylate membrane transporter BG259_20785 PF00593 TonB dependent receptor BG259_20785 PF07715 TonB-dependent Receptor Plug Domain BG259_20800 PF11756 Nitrous oxide-stimulated promoter BG259_20815 PF07690 Major Facilitator Superfamily BG259_20820 PF00085 Thioredoxin BG259_20825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BG259_20825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BG259_20850 PF00529 HlyD membrane-fusion protein of T1SS BG259_20850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_20860 PF01594 AI-2E family transporter BG259_20870 PF01238 Phosphomannose isomerase type I BG259_20875 PF07690 Major Facilitator Superfamily BG259_20880 PF05231 MASE1 BG259_20880 PF07730 Histidine kinase BG259_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_20885 PF00072 Response regulator receiver domain BG259_20885 PF00196 Bacterial regulatory proteins, luxR family BG259_20890 PF07690 Major Facilitator Superfamily BG259_20920 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_20920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BG259_20945 PF13597 Anaerobic ribonucleoside-triphosphate reductase BG259_20945 PF03477 ATP cone domain BG259_20955 PF01554 MatE BG259_20960 PF12833 Helix-turn-helix domain BG259_20965 PF00155 Aminotransferase class I and II BG259_20970 PF18030 RimK PreATP-grasp domain BG259_20970 PF08443 RimK-like ATP-grasp domain BG259_20980 PF04076 Bacterial OB fold (BOF) protein BG259_20985 PF07685 CobB/CobQ-like glutamine amidotransferase domain BG259_20985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BG259_20995 PF00528 Binding-protein-dependent transport system inner membrane component BG259_21000 PF00005 ABC transporter BG259_21000 PF03459 TOBE domain BG259_21010 PF00360 Phytochrome region BG259_21010 PF01590 GAF domain BG259_21010 PF00990 Diguanylate cyclase, GGDEF domain BG259_21010 PF00563 EAL domain BG259_21025 PF17158 Membrane-associated sensor, integral membrane domain BG259_21025 PF00990 Diguanylate cyclase, GGDEF domain BG259_21040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BG259_21040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BG259_21040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BG259_21045 PF02233 NAD(P) transhydrogenase beta subunit BG259_21055 PF00072 Response regulator receiver domain BG259_21055 PF00486 Transcriptional regulatory protein, C terminal BG259_21070 PF03701 Uncharacterised protein family (UPF0181) BG259_21095 PF01253 Translation initiation factor SUI1 BG259_21105 PF07478 D-ala D-ala ligase C-terminus BG259_21105 PF01820 D-ala D-ala ligase N-terminus BG259_21110 PF05036 Sporulation related domain BG259_21115 PF13607 Succinyl-CoA ligase like flavodoxin domain BG259_21115 PF13380 CoA binding domain BG259_21115 PF00583 Acetyltransferase (GNAT) family BG259_21120 PF00593 TonB dependent receptor BG259_21120 PF07715 TonB-dependent Receptor Plug Domain BG259_21120 PF04886 PT repeat BG259_21125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_21125 PF03466 LysR substrate binding domain BG259_21130 PF04886 PT repeat BG259_21130 PF00593 TonB dependent receptor BG259_21130 PF07715 TonB-dependent Receptor Plug Domain BG259_21135 PF16363 GDP-mannose 4,6 dehydratase BG259_21140 PF05231 MASE1 BG259_21140 PF00990 Diguanylate cyclase, GGDEF domain BG259_21140 PF00563 EAL domain BG259_21140 PF08447 PAS fold BG259_21140 PF13426 PAS domain BG259_21140 PF08448 PAS fold BG259_21145 PF03746 LamB/YcsF family BG259_21150 PF02682 Carboxyltransferase domain, subdomain C and D BG259_21155 PF02626 Carboxyltransferase domain, subdomain A and B BG259_21170 PF00005 ABC transporter BG259_21175 PF13472 GDSL-like Lipase/Acylhydrolase family BG259_21180 PF12241 Trans-2-enoyl-CoA reductase catalytic region BG259_21180 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BG259_21180 PF07055 Enoyl reductase FAD binding domain BG259_21185 PF03707 Bacterial signalling protein N terminal repeat BG259_21185 PF13188 PAS domain BG259_21185 PF00990 Diguanylate cyclase, GGDEF domain BG259_21185 PF00563 EAL domain BG259_21195 PF00684 DnaJ central domain BG259_21195 PF01556 DnaJ C terminal domain BG259_21195 PF00226 DnaJ domain BG259_21220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_21220 PF12793 Sugar transport-related sRNA regulator N-term BG259_21230 PF03061 Thioesterase superfamily BG259_21245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BG259_21250 PF12262 Bacterial virulence factor lipase N-terminal BG259_21265 PF02574 Homocysteine S-methyltransferase BG259_21265 PF02965 Vitamin B12 dependent methionine synthase, activation domain BG259_21265 PF02310 B12 binding domain BG259_21265 PF00809 Pterin binding enzyme BG259_21265 PF02607 B12 binding domain BG259_21280 PF03741 Integral membrane protein TerC family BG259_21285 PF02872 5'-nucleotidase, C-terminal domain BG259_21285 PF00149 Calcineurin-like phosphoesterase BG259_21290 PF11398 Protein of unknown function (DUF2813) BG259_21295 PF06496 Protein of unknown function (DUF1097) BG259_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_21300 PF03466 LysR substrate binding domain BG259_21310 PF01226 Formate/nitrite transporter BG259_21315 PF04264 YceI-like domain BG259_21320 PF01292 Prokaryotic cytochrome b561 BG259_21335 PF12792 CSS motif domain associated with EAL BG259_21335 PF00563 EAL domain BG259_21340 PF00270 DEAD/DEAH box helicase BG259_21340 PF00271 Helicase conserved C-terminal domain BG259_21345 PF04336 Acyl carrier protein phosphodiesterase BG259_21350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_21350 PF00672 HAMP domain BG259_21360 PF13419 Haloacid dehalogenase-like hydrolase BG259_21365 PF11849 Domain of unknown function (DUF3369) BG259_21380 PF00294 pfkB family carbohydrate kinase BG259_21385 PF01268 Formate--tetrahydrofolate ligase BG259_21390 PF00483 Nucleotidyl transferase BG259_21395 PF06483 Chitinase C BG259_21395 PF00704 Glycosyl hydrolases family 18 BG259_21400 PF12833 Helix-turn-helix domain BG259_21400 PF06719 AraC-type transcriptional regulator N-terminus BG259_21405 PF00465 Iron-containing alcohol dehydrogenase BG259_21415 PF00005 ABC transporter BG259_21420 PF00528 Binding-protein-dependent transport system inner membrane component BG259_21425 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_21430 PF00528 Binding-protein-dependent transport system inner membrane component BG259_21435 PF00989 PAS fold BG259_21435 PF00990 Diguanylate cyclase, GGDEF domain BG259_21435 PF01590 GAF domain BG259_21435 PF00563 EAL domain BG259_21450 PF00356 Bacterial regulatory proteins, lacI family BG259_21450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG259_21455 PF00381 PTS HPr component phosphorylation site BG259_21455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_21460 PF00294 pfkB family carbohydrate kinase BG259_21465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_21465 PF02378 Phosphotransferase system, EIIC BG259_21490 PF00873 AcrB/AcrD/AcrF family BG259_21495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_21500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_21510 PF01571 Aminomethyltransferase folate-binding domain BG259_21510 PF08669 Glycine cleavage T-protein C-terminal barrel domain BG259_21520 PF00464 Serine hydroxymethyltransferase BG259_21525 PF01597 Glycine cleavage H-protein BG259_21530 PF02347 Glycine cleavage system P-protein BG259_21570 PF07690 Major Facilitator Superfamily BG259_21590 PF17848 Acetyl-coA carboxylase zinc finger domain BG259_21590 PF01039 Carboxyl transferase domain BG259_21595 PF03466 LysR substrate binding domain BG259_21595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_21610 PF07733 Bacterial DNA polymerase III alpha NTPase domain BG259_21610 PF14579 Helix-hairpin-helix motif BG259_21610 PF02811 PHP domain BG259_21610 PF00929 Exonuclease BG259_21610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BG259_21610 PF11490 DNA polymerase III polC-type N-terminus II BG259_21620 PF01638 HxlR-like helix-turn-helix BG259_21635 PF00005 ABC transporter BG259_21635 PF00664 ABC transporter transmembrane region BG259_21640 PF00171 Aldehyde dehydrogenase family BG259_21660 PF00892 EamA-like transporter family BG259_21665 PF00893 Small Multidrug Resistance protein BG259_21680 PF01569 PAP2 superfamily BG259_21685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG259_21685 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_21690 PF01040 UbiA prenyltransferase family BG259_21695 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BG259_21700 PF00510 Cytochrome c oxidase subunit III BG259_21705 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG259_21710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BG259_21710 PF06481 COX Aromatic Rich Motif BG259_21725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BG259_21725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG259_21730 PF00378 Enoyl-CoA hydratase/isomerase BG259_21735 PF00378 Enoyl-CoA hydratase/isomerase BG259_21745 PF00171 Aldehyde dehydrogenase family BG259_21750 PF02803 Thiolase, C-terminal domain BG259_21750 PF00108 Thiolase, N-terminal domain BG259_21755 PF00376 MerR family regulatory protein BG259_21755 PF09278 MerR, DNA binding BG259_21760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BG259_21760 PF02770 Acyl-CoA dehydrogenase, middle domain BG259_21760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BG259_21765 PF01039 Carboxyl transferase domain BG259_21770 PF00378 Enoyl-CoA hydratase/isomerase BG259_21775 PF00682 HMGL-like BG259_21795 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_21805 PF00034 Cytochrome c BG259_21810 PF00115 Cytochrome C and Quinol oxidase polypeptide I BG259_21820 PF00034 Cytochrome c BG259_21820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BG259_21835 PF00892 EamA-like transporter family BG259_21845 PF07963 Prokaryotic N-terminal methylation motif BG259_21845 PF08334 Type II secretion system (T2SS), protein G BG259_21850 PF00072 Response regulator receiver domain BG259_21850 PF01584 CheW-like domain BG259_21860 PF00881 Nitroreductase family BG259_21870 PF00072 Response regulator receiver domain BG259_21870 PF00196 Bacterial regulatory proteins, luxR family BG259_21875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_21875 PF03466 LysR substrate binding domain BG259_21880 PF00990 Diguanylate cyclase, GGDEF domain BG259_21885 PF00196 Bacterial regulatory proteins, luxR family BG259_21885 PF00072 Response regulator receiver domain BG259_21890 PF00990 Diguanylate cyclase, GGDEF domain BG259_21890 PF03707 Bacterial signalling protein N terminal repeat BG259_21890 PF13188 PAS domain BG259_21890 PF00563 EAL domain BG259_21895 PF00512 His Kinase A (phospho-acceptor) domain BG259_21895 PF09456 RcsC Alpha-Beta-Loop (ABL) BG259_21895 PF00072 Response regulator receiver domain BG259_21895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_21910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_21910 PF00005 ABC transporter BG259_21915 PF00005 ABC transporter BG259_21915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_21920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_21925 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_21925 PF00528 Binding-protein-dependent transport system inner membrane component BG259_21930 PF00528 Binding-protein-dependent transport system inner membrane component BG259_21935 PF00672 HAMP domain BG259_21935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_21935 PF00512 His Kinase A (phospho-acceptor) domain BG259_21935 PF18698 Histidine kinase sensor domain BG259_21935 PF00989 PAS fold BG259_21940 PF00486 Transcriptional regulatory protein, C terminal BG259_21940 PF00072 Response regulator receiver domain BG259_21945 PF00563 EAL domain BG259_21945 PF00990 Diguanylate cyclase, GGDEF domain BG259_21945 PF03707 Bacterial signalling protein N terminal repeat BG259_21955 PF07715 TonB-dependent Receptor Plug Domain BG259_21955 PF00593 TonB dependent receptor BG259_21960 PF00005 ABC transporter BG259_21965 PF01032 FecCD transport family BG259_21970 PF01032 FecCD transport family BG259_21975 PF01497 Periplasmic binding protein BG259_21980 PF00593 TonB dependent receptor BG259_21980 PF07660 Secretin and TonB N terminus short domain BG259_21980 PF07715 TonB-dependent Receptor Plug Domain BG259_21985 PF07715 TonB-dependent Receptor Plug Domain BG259_21985 PF00593 TonB dependent receptor BG259_21990 PF02655 ATP-grasp domain BG259_21990 PF00206 Lyase BG259_22005 PF06276 Ferric iron reductase FhuF-like transporter BG259_22005 PF04183 IucA / IucC family BG259_22010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BG259_22010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BG259_22015 PF01263 Aldose 1-epimerase BG259_22020 PF00480 ROK family BG259_22025 PF00083 Sugar (and other) transporter BG259_22030 PF13181 Tetratricopeptide repeat BG259_22030 PF17128 Domain of unknown function (DUF5107) BG259_22090 PF01037 Lrp/AsnC ligand binding domain BG259_22125 PF00069 Protein kinase domain BG259_22150 PF04717 Type VI secretion system, phage-baseplate injector BG259_22155 PF05638 Type VI secretion system effector, Hcp BG259_22160 PF17871 AAA lid domain BG259_22160 PF10431 C-terminal, D2-small domain, of ClpB protein BG259_22160 PF00004 ATPase family associated with various cellular activities (AAA) BG259_22160 PF07724 AAA domain (Cdc48 subfamily) BG259_22165 PF02954 Bacterial regulatory protein, Fis family BG259_22165 PF00158 Sigma-54 interaction domain BG259_22165 PF00072 Response regulator receiver domain BG259_22170 PF00691 OmpA family BG259_22190 PF01476 LysM domain BG259_22190 PF08525 Opacity-associated protein A N-terminal motif BG259_22190 PF01551 Peptidase family M23 BG259_22195 PF01926 50S ribosome-binding GTPase BG259_22200 PF00155 Aminotransferase class I and II BG259_22205 PF00072 Response regulator receiver domain BG259_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_22225 PF03606 C4-dicarboxylate anaerobic carrier BG259_22230 PF04011 LemA family BG259_22235 PF01435 Peptidase family M48 BG259_22250 PF18081 Fanconi anemia-associated nuclease SAP domain BG259_22250 PF08774 VRR-NUC domain BG259_22260 PF13186 Iron-sulfur cluster-binding domain BG259_22260 PF04055 Radical SAM superfamily BG259_22265 PF03781 Sulfatase-modifying factor enzyme 1 BG259_22280 PF04076 Bacterial OB fold (BOF) protein BG259_22285 PF00781 Diacylglycerol kinase catalytic domain BG259_22290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_22290 PF03466 LysR substrate binding domain BG259_22295 PF01872 RibD C-terminal domain BG259_22295 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG259_22300 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BG259_22300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BG259_22305 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG259_22305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_22310 PF00231 ATP synthase BG259_22315 PF02874 ATP synthase alpha/beta family, beta-barrel domain BG259_22315 PF00306 ATP synthase alpha/beta chain, C terminal domain BG259_22315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_22320 PF00213 ATP synthase delta (OSCP) subunit BG259_22325 PF00430 ATP synthase B/B' CF(0) BG259_22330 PF00137 ATP synthase subunit C BG259_22335 PF00119 ATP synthase A chain BG259_22355 PF00092 von Willebrand factor type A domain BG259_22370 PF07726 ATPase family associated with various cellular activities (AAA) BG259_22370 PF17863 AAA lid domain BG259_22375 PF04055 Radical SAM superfamily BG259_22375 PF13186 Iron-sulfur cluster-binding domain BG259_22380 PF00884 Sulfatase BG259_22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_22385 PF03466 LysR substrate binding domain BG259_22395 PF00884 Sulfatase BG259_22400 PF00884 Sulfatase BG259_22405 PF00486 Transcriptional regulatory protein, C terminal BG259_22405 PF00072 Response regulator receiver domain BG259_22410 PF00672 HAMP domain BG259_22410 PF00512 His Kinase A (phospho-acceptor) domain BG259_22410 PF16750 Sensor domain of 2-component histidine kinase BG259_22410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_22430 PF00512 His Kinase A (phospho-acceptor) domain BG259_22430 PF00072 Response regulator receiver domain BG259_22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_22430 PF00672 HAMP domain BG259_22430 PF01627 Hpt domain BG259_22435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BG259_22440 PF02142 MGS-like domain BG259_22445 PF13361 UvrD-like helicase C-terminal domain BG259_22445 PF00580 UvrD/REP helicase N-terminal domain BG259_22445 PF12462 DNA helicase IV / RNA helicase N terminal BG259_22450 PF12805 FUSC-like inner membrane protein yccS BG259_22485 PF12843 Putative quorum-sensing-regulated virulence factor BG259_22515 PF01329 Pterin 4 alpha carbinolamine dehydratase BG259_22520 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BG259_22530 PF00501 AMP-binding enzyme BG259_22530 PF13193 AMP-binding enzyme C-terminal domain BG259_22540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_22540 PF03466 LysR substrate binding domain BG259_22550 PF00892 EamA-like transporter family BG259_22565 PF00465 Iron-containing alcohol dehydrogenase BG259_22570 PF07995 Glucose / Sorbosone dehydrogenase BG259_22575 PF02016 LD-carboxypeptidase N-terminal domain BG259_22575 PF17676 LD-carboxypeptidase C-terminal domain BG259_22585 PF00210 Ferritin-like domain BG259_22590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_22590 PF00672 HAMP domain BG259_22590 PF17200 Single Cache domain 2 BG259_22610 PF13533 Biotin-lipoyl like BG259_22615 PF00072 Response regulator receiver domain BG259_22615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_22620 PF02321 Outer membrane efflux protein BG259_22625 PF00005 ABC transporter BG259_22625 PF00664 ABC transporter transmembrane region BG259_22630 PF00005 ABC transporter BG259_22640 PF00140 Sigma-70 factor, region 1.2 BG259_22640 PF04542 Sigma-70 region 2 BG259_22640 PF04539 Sigma-70 region 3 BG259_22640 PF04545 Sigma-70, region 4 BG259_22650 PF00005 ABC transporter BG259_22650 PF02687 FtsX-like permease family BG259_22650 PF12704 MacB-like periplasmic core domain BG259_22655 PF02687 FtsX-like permease family BG259_22655 PF00005 ABC transporter BG259_22655 PF12704 MacB-like periplasmic core domain BG259_22670 PF00990 Diguanylate cyclase, GGDEF domain BG259_22680 PF03889 Alternative ribosome-rescue factor A BG259_22685 PF00313 'Cold-shock' DNA-binding domain BG259_22725 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BG259_22750 PF03524 Conjugal transfer protein BG259_22755 PF03743 Bacterial conjugation TrbI-like protein BG259_22760 PF00437 Type II/IV secretion system protein BG259_22765 PF02534 Type IV secretory system Conjugative DNA transfer BG259_22780 PF00392 Bacterial regulatory proteins, gntR family BG259_22780 PF07729 FCD domain BG259_22785 PF03480 Bacterial extracellular solute-binding protein, family 7 BG259_22790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BG259_22795 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BG259_22800 PF02615 Malate/L-lactate dehydrogenase BG259_22805 PF00107 Zinc-binding dehydrogenase BG259_22805 PF08240 Alcohol dehydrogenase GroES-like domain BG259_22810 PF08125 Mannitol dehydrogenase C-terminal domain BG259_22810 PF01232 Mannitol dehydrogenase Rossmann domain BG259_22820 PF01081 KDPG and KHG aldolase BG259_22825 PF13378 Enolase C-terminal domain-like BG259_22825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG259_22830 PF04074 YhcH/YjgK/YiaL BG259_22835 PF13419 Haloacid dehalogenase-like hydrolase BG259_22910 PF00589 Phage integrase family BG259_22910 PF02899 Phage integrase, N-terminal SAM-like domain BG259_22935 PF03432 Relaxase/Mobilisation nuclease domain BG259_22935 PF18821 Large polyvalent protein-associated domain 7 BG259_22965 PF04002 RadC-like JAB domain BG259_22975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_22975 PF00005 ABC transporter BG259_22980 PF00005 ABC transporter BG259_22980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_22985 PF12911 N-terminal TM domain of oligopeptide transport permease C BG259_22985 PF00528 Binding-protein-dependent transport system inner membrane component BG259_22990 PF00528 Binding-protein-dependent transport system inner membrane component BG259_22995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_23125 PF01844 HNH endonuclease BG259_23160 PF02369 Bacterial Ig-like domain (group 1) BG259_23160 PF09134 Invasin, domain 3 BG259_23160 PF11924 Inverse autotransporter, beta-domain BG259_23170 PF11922 Domain of unknown function (DUF3440) BG259_23170 PF01507 Phosphoadenosine phosphosulfate reductase family BG259_23175 PF02195 ParB-like nuclease domain BG259_23190 PF05656 Protein of unknown function (DUF805) BG259_23210 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BG259_23215 PF02899 Phage integrase, N-terminal SAM-like domain BG259_23215 PF00589 Phage integrase family BG259_23225 PF00691 OmpA family BG259_23225 PF13488 Glycine zipper BG259_23235 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BG259_23235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BG259_23260 PF00196 Bacterial regulatory proteins, luxR family BG259_23260 PF00072 Response regulator receiver domain BG259_23265 PF13419 Haloacid dehalogenase-like hydrolase BG259_23270 PF00472 RF-1 domain BG259_23275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_23275 PF00672 HAMP domain BG259_23275 PF12729 Four helix bundle sensory module for signal transduction BG259_23280 PF00873 AcrB/AcrD/AcrF family BG259_23285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_23290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BG259_23295 PF01546 Peptidase family M20/M25/M40 BG259_23295 PF07687 Peptidase dimerisation domain BG259_23310 PF00072 Response regulator receiver domain BG259_23310 PF00196 Bacterial regulatory proteins, luxR family BG259_23315 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BG259_23315 PF07730 Histidine kinase BG259_23315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_23315 PF00672 HAMP domain BG259_23320 PF13187 4Fe-4S dicluster domain BG259_23320 PF12838 4Fe-4S dicluster domain BG259_23330 PF01568 Molydopterin dinucleotide binding domain BG259_23330 PF00384 Molybdopterin oxidoreductase BG259_23330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BG259_23335 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BG259_23340 PF03264 NapC/NirT cytochrome c family, N-terminal region BG259_23355 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BG259_23355 PF00561 alpha/beta hydrolase fold BG259_23365 PF00108 Thiolase, N-terminal domain BG259_23365 PF02803 Thiolase, C-terminal domain BG259_23370 PF00106 short chain dehydrogenase BG259_23375 PF01810 LysE type translocator BG259_23385 PF02355 Protein export membrane protein BG259_23385 PF07549 SecD/SecF GG Motif BG259_23390 PF02355 Protein export membrane protein BG259_23390 PF13721 SecD export protein N-terminal TM region BG259_23390 PF07549 SecD/SecF GG Motif BG259_23420 PF01037 Lrp/AsnC ligand binding domain BG259_23435 PF00512 His Kinase A (phospho-acceptor) domain BG259_23435 PF00072 Response regulator receiver domain BG259_23435 PF09308 LuxQ, periplasmic BG259_23435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_23440 PF13407 Periplasmic binding protein domain BG259_23445 PF01541 GIY-YIG catalytic domain BG259_23450 PF04337 Protein of unknown function, DUF480 BG259_23460 PF04363 Protein of unknown function (DUF496) BG259_23465 PF01554 MatE BG259_23470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_23475 PF00072 Response regulator receiver domain BG259_23475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BG259_23475 PF00512 His Kinase A (phospho-acceptor) domain BG259_23475 PF01627 Hpt domain BG259_23475 PF00672 HAMP domain BG259_23475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_23480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG259_23480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BG259_23495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_23495 PF03466 LysR substrate binding domain BG259_23505 PF01037 Lrp/AsnC ligand binding domain BG259_23505 PF13404 AsnC-type helix-turn-helix domain BG259_23510 PF13520 Amino acid permease BG259_23515 PF00392 Bacterial regulatory proteins, gntR family BG259_23515 PF00155 Aminotransferase class I and II BG259_23525 PF16527 Two-component sensor protein CpxA, periplasmic domain BG259_23525 PF00672 HAMP domain BG259_23525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_23525 PF00512 His Kinase A (phospho-acceptor) domain BG259_23530 PF00486 Transcriptional regulatory protein, C terminal BG259_23530 PF00072 Response regulator receiver domain BG259_23545 PF12833 Helix-turn-helix domain BG259_23555 PF00529 HlyD membrane-fusion protein of T1SS BG259_23555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_23560 PF03109 ABC1 family BG259_23565 PF00571 CBS domain BG259_23565 PF01769 Divalent cation transporter BG259_23565 PF03448 MgtE intracellular N domain BG259_23570 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BG259_23575 PF07969 Amidohydrolase family BG259_23590 PF01966 HD domain BG259_23615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BG259_23620 PF00255 Glutathione peroxidase BG259_23635 PF01323 DSBA-like thioredoxin domain BG259_23650 PF00106 short chain dehydrogenase BG259_23655 PF00114 Pilin (bacterial filament) BG259_23655 PF07963 Prokaryotic N-terminal methylation motif BG259_23660 PF07729 FCD domain BG259_23660 PF00392 Bacterial regulatory proteins, gntR family BG259_23665 PF04205 FMN-binding domain BG259_23665 PF00890 FAD binding domain BG259_23670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BG259_23670 PF13378 Enolase C-terminal domain-like BG259_23675 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_23680 PF00072 Response regulator receiver domain BG259_23680 PF00486 Transcriptional regulatory protein, C terminal BG259_23685 PF00672 HAMP domain BG259_23685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_23685 PF00512 His Kinase A (phospho-acceptor) domain BG259_23695 PF01219 Prokaryotic diacylglycerol kinase BG259_23700 PF00884 Sulfatase BG259_23700 PF08019 Phosphoethanolamine transferase EptA/EptB BG259_23705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_23710 PF01965 DJ-1/PfpI family BG259_23710 PF12833 Helix-turn-helix domain BG259_23715 PF00857 Isochorismatase family BG259_23725 PF07690 Major Facilitator Superfamily BG259_23745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_23745 PF03466 LysR substrate binding domain BG259_23785 PF01467 Cytidylyltransferase-like BG259_23790 PF02540 NAD synthase BG259_23795 PF03473 MOSC domain BG259_23795 PF03476 MOSC N-terminal beta barrel domain BG259_23795 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_23795 PF03476 MOSC N-terminal beta barrel domain BG259_23795 PF03473 MOSC domain BG259_23795 PF00111 2Fe-2S iron-sulfur cluster binding domain BG259_23800 PF01679 Proteolipid membrane potential modulator BG259_23805 PF01979 Amidohydrolase family BG259_23810 PF05661 Protein of unknown function (DUF808) BG259_23835 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BG259_23835 PF01464 Transglycosylase SLT domain BG259_23880 PF00528 Binding-protein-dependent transport system inner membrane component BG259_23885 PF14785 Maltose transport system permease protein MalF P2 domain BG259_23885 PF00528 Binding-protein-dependent transport system inner membrane component BG259_23890 PF01547 Bacterial extracellular solute-binding protein BG259_23900 PF08402 TOBE domain BG259_23900 PF00005 ABC transporter BG259_23905 PF02397 Bacterial sugar transferase BG259_23920 PF13614 AAA domain BG259_23920 PF13807 G-rich domain on putative tyrosine kinase BG259_23920 PF02706 Chain length determinant protein BG259_23930 PF00534 Glycosyl transferases group 1 BG259_23930 PF13439 Glycosyltransferase Family 4 BG259_23965 PF16925 Tetracyclin repressor-like, C-terminal domain BG259_23965 PF00440 Bacterial regulatory proteins, tetR family BG259_23970 PF16884 N-terminal domain of oxidoreductase BG259_23970 PF00107 Zinc-binding dehydrogenase BG259_23980 PF00199 Catalase BG259_23980 PF06628 Catalase-related immune-responsive BG259_23985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BG259_23985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BG259_23995 PF03466 LysR substrate binding domain BG259_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_24020 PF12833 Helix-turn-helix domain BG259_24025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_24025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BG259_24030 PF01238 Phosphomannose isomerase type I BG259_24040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24040 PF03466 LysR substrate binding domain BG259_24045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_24045 PF00529 HlyD membrane-fusion protein of T1SS BG259_24050 PF11742 Protein of unknown function (DUF3302) BG259_24065 PF18113 Rubredoxin binding C-terminal domain BG259_24065 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_24070 PF00258 Flavodoxin BG259_24070 PF00301 Rubredoxin BG259_24070 PF00753 Metallo-beta-lactamase superfamily BG259_24075 PF01590 GAF domain BG259_24075 PF00158 Sigma-54 interaction domain BG259_24080 PF13419 Haloacid dehalogenase-like hydrolase BG259_24090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24090 PF03466 LysR substrate binding domain BG259_24095 PF01497 Periplasmic binding protein BG259_24095 PF12833 Helix-turn-helix domain BG259_24100 PF00155 Aminotransferase class I and II BG259_24120 PF03099 Biotin/lipoate A/B protein ligase family BG259_24130 PF00535 Glycosyl transferase family 2 BG259_24140 PF00271 Helicase conserved C-terminal domain BG259_24140 PF00270 DEAD/DEAH box helicase BG259_24150 PF03466 LysR substrate binding domain BG259_24150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24170 PF03466 LysR substrate binding domain BG259_24170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24180 PF07690 Major Facilitator Superfamily BG259_24190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BG259_24205 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BG259_24225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24225 PF03466 LysR substrate binding domain BG259_24235 PF00990 Diguanylate cyclase, GGDEF domain BG259_24235 PF13185 GAF domain BG259_24235 PF00563 EAL domain BG259_24240 PF00710 Asparaginase, N-terminal BG259_24240 PF17763 Glutaminase/Asparaginase C-terminal domain BG259_24245 PF03618 Kinase/pyrophosphorylase BG259_24250 PF00391 PEP-utilising enzyme, mobile domain BG259_24250 PF02896 PEP-utilising enzyme, TIM barrel domain BG259_24250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BG259_24260 PF00196 Bacterial regulatory proteins, luxR family BG259_24260 PF00072 Response regulator receiver domain BG259_24265 PF00579 tRNA synthetases class I (W and Y) BG259_24280 PF03466 LysR substrate binding domain BG259_24280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_24290 PF00873 AcrB/AcrD/AcrF family BG259_24295 PF02321 Outer membrane efflux protein BG259_24300 PF02600 Disulfide bond formation protein DsbB BG259_24305 PF03616 Sodium/glutamate symporter BG259_24320 PF00563 EAL domain BG259_24320 PF03707 Bacterial signalling protein N terminal repeat BG259_24320 PF00990 Diguanylate cyclase, GGDEF domain BG259_24330 PF00196 Bacterial regulatory proteins, luxR family BG259_24335 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BG259_24335 PF00703 Glycosyl hydrolases family 2 BG259_24335 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BG259_24335 PF02837 Glycosyl hydrolases family 2, sugar binding domain BG259_24340 PF02028 BCCT, betaine/carnitine/choline family transporter BG259_24345 PF13193 AMP-binding enzyme C-terminal domain BG259_24345 PF00501 AMP-binding enzyme BG259_24355 PF08218 Citrate lyase ligase C-terminal domain BG259_24380 PF00873 AcrB/AcrD/AcrF family BG259_24395 PF00873 AcrB/AcrD/AcrF family BG259_24400 PF13533 Biotin-lipoyl like BG259_24405 PF13091 PLD-like domain BG259_24430 PF09278 MerR, DNA binding BG259_24430 PF00376 MerR family regulatory protein BG259_24435 PF00194 Eukaryotic-type carbonic anhydrase BG259_24440 PF11008 Protein of unknown function (DUF2846) BG259_24450 PF00293 NUDIX domain BG259_24465 PF08240 Alcohol dehydrogenase GroES-like domain BG259_24465 PF00107 Zinc-binding dehydrogenase BG259_24470 PF00155 Aminotransferase class I and II BG259_24475 PF00563 EAL domain BG259_24475 PF03707 Bacterial signalling protein N terminal repeat BG259_24475 PF00990 Diguanylate cyclase, GGDEF domain BG259_24480 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_24485 PF00266 Aminotransferase class-V BG259_24490 PF00072 Response regulator receiver domain BG259_24490 PF13426 PAS domain BG259_24490 PF00512 His Kinase A (phospho-acceptor) domain BG259_24490 PF08448 PAS fold BG259_24490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_24495 PF00072 Response regulator receiver domain BG259_24495 PF00486 Transcriptional regulatory protein, C terminal BG259_24515 PF03466 LysR substrate binding domain BG259_24515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_24555 PF03466 LysR substrate binding domain BG259_24555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24570 PF00563 EAL domain BG259_24570 PF05231 MASE1 BG259_24580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BG259_24580 PF18269 T3SS EscN ATPase C-terminal domain BG259_24590 PF14842 FliG N-terminal domain BG259_24590 PF14841 FliG middle domain BG259_24590 PF01706 FliG C-terminal domain BG259_24595 PF08345 Flagellar M-ring protein C-terminal BG259_24595 PF01514 Secretory protein of YscJ/FliF family BG259_24600 PF02049 Flagellar hook-basal body complex protein FliE BG259_24605 PF00158 Sigma-54 interaction domain BG259_24605 PF00072 Response regulator receiver domain BG259_24605 PF02954 Bacterial regulatory protein, Fis family BG259_24620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BG259_24625 PF00813 FliP family BG259_24630 PF01313 Bacterial export proteins, family 3 BG259_24635 PF01311 Bacterial export proteins, family 1 BG259_24640 PF01312 FlhB HrpN YscU SpaS Family BG259_24645 PF00771 FHIPEP family BG259_24655 PF00669 Bacterial flagellin N-terminal helical region BG259_24655 PF00700 Bacterial flagellin C-terminal helical region BG259_24665 PF02465 Flagellar hook-associated protein 2 N-terminus BG259_24665 PF07196 Flagellin hook IN motif BG259_24665 PF07195 Flagellar hook-associated protein 2 C-terminus BG259_24670 PF02561 Flagellar protein FliS BG259_24685 PF03748 Flagellar basal body-associated protein FliL BG259_24690 PF04542 Sigma-70 region 2 BG259_24690 PF04545 Sigma-70, region 4 BG259_24695 PF01618 MotA/TolQ/ExbB proton channel family BG259_24700 PF00691 OmpA family BG259_24700 PF13677 Membrane MotB of proton-channel complex MotA/MotB BG259_24725 PF08000 Bacterial PH domain BG259_24735 PF00497 Bacterial extracellular solute-binding proteins, family 3 BG259_24750 PF04205 FMN-binding domain BG259_24760 PF00578 AhpC/TSA family BG259_24765 PF00005 ABC transporter BG259_24785 PF10634 Fe2+ transport protein BG259_24790 PF03239 Iron permease FTR1 family BG259_24810 PF08241 Methyltransferase domain BG259_24825 PF01070 FMN-dependent dehydrogenase BG259_24845 PF00669 Bacterial flagellin N-terminal helical region BG259_24850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_24850 PF00460 Flagella basal body rod protein BG259_24855 PF10135 Rod binding protein BG259_24855 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BG259_24860 PF02119 Flagellar P-ring protein BG259_24865 PF02107 Flagellar L-ring protein BG259_24870 PF00460 Flagella basal body rod protein BG259_24870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_24875 PF00460 Flagella basal body rod protein BG259_24875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_24880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_24880 PF00460 Flagella basal body rod protein BG259_24880 PF07559 Flagellar basal body protein FlaE BG259_24885 PF13860 FlgD Ig-like domain BG259_24885 PF03963 Flagellar hook capping protein - N-terminal region BG259_24885 PF13861 FlgD Tudor-like domain BG259_24890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BG259_24890 PF00460 Flagella basal body rod protein BG259_24895 PF00460 Flagella basal body rod protein BG259_24915 PF01464 Transglycosylase SLT domain BG259_24915 PF01476 LysM domain BG259_24940 PF03315 Serine dehydratase beta chain BG259_24940 PF03313 Serine dehydratase alpha chain BG259_24945 PF00854 POT family BG259_24950 PF01566 Natural resistance-associated macrophage protein BG259_24960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24960 PF03466 LysR substrate binding domain BG259_24970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_24970 PF03466 LysR substrate binding domain BG259_24975 PF00691 OmpA family BG259_24975 PF01389 OmpA-like transmembrane domain BG259_24980 PF18027 Cytosolic carboxypeptidase N-terminal domain BG259_24980 PF00246 Zinc carboxypeptidase BG259_24985 PF01266 FAD dependent oxidoreductase BG259_24995 PF04393 Protein of unknown function (DUF535) BG259_25010 PF00392 Bacterial regulatory proteins, gntR family BG259_25010 PF07702 UTRA domain BG259_25015 PF00528 Binding-protein-dependent transport system inner membrane component BG259_25020 PF00005 ABC transporter BG259_25030 PF00266 Aminotransferase class-V BG259_25040 PF13419 Haloacid dehalogenase-like hydrolase BG259_25045 PF00356 Bacterial regulatory proteins, lacI family BG259_25050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_25060 PF03611 PTS system sugar-specific permease component BG259_25075 PF00657 GDSL-like Lipase/Acylhydrolase BG259_25110 PF13419 Haloacid dehalogenase-like hydrolase BG259_25115 PF03466 LysR substrate binding domain BG259_25115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_25155 PF14602 Hexapeptide repeat of succinyl-transferase BG259_25155 PF12464 Maltose acetyltransferase BG259_25160 PF02566 OsmC-like protein BG259_25165 PF01641 SelR domain BG259_25165 PF01625 Peptide methionine sulfoxide reductase BG259_25180 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BG259_25185 PF00875 DNA photolyase BG259_25185 PF03441 FAD binding domain of DNA photolyase BG259_25190 PF00990 Diguanylate cyclase, GGDEF domain BG259_25205 PF00990 Diguanylate cyclase, GGDEF domain BG259_25205 PF05230 MASE2 domain BG259_25225 PF00483 Nucleotidyl transferase BG259_25230 PF01773 Na+ dependent nucleoside transporter N-terminus BG259_25230 PF07670 Nucleoside recognition BG259_25230 PF07662 Na+ dependent nucleoside transporter C-terminus BG259_25250 PF01212 Beta-eliminating lyase BG259_25255 PF03116 NQR2, RnfD, RnfE family BG259_25265 PF01266 FAD dependent oxidoreductase BG259_25280 PF05525 Branched-chain amino acid transport protein BG259_25285 PF00158 Sigma-54 interaction domain BG259_25285 PF00072 Response regulator receiver domain BG259_25285 PF02954 Bacterial regulatory protein, Fis family BG259_25290 PF02743 Cache domain BG259_25290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_25290 PF00512 His Kinase A (phospho-acceptor) domain BG259_25295 PF00232 Glycosyl hydrolase family 1 BG259_25320 PF03466 LysR substrate binding domain BG259_25320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_25330 PF12706 Beta-lactamase superfamily domain BG259_25345 PF08443 RimK-like ATP-grasp domain BG259_25345 PF18030 RimK PreATP-grasp domain BG259_25350 PF08443 RimK-like ATP-grasp domain BG259_25350 PF18030 RimK PreATP-grasp domain BG259_25355 PF00753 Metallo-beta-lactamase superfamily BG259_25360 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BG259_25360 PF17810 Arginine decarboxylase helical bundle domain BG259_25360 PF17944 Arginine decarboxylase C-terminal helical extension BG259_25365 PF00491 Arginase family BG259_25370 PF07690 Major Facilitator Superfamily BG259_25375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BG259_25375 PF00326 Prolyl oligopeptidase family BG259_25390 PF00950 ABC 3 transport family BG259_25395 PF00005 ABC transporter BG259_25400 PF01297 Zinc-uptake complex component A periplasmic BG259_25445 PF02472 Biopolymer transport protein ExbD/TolR BG259_25450 PF01618 MotA/TolQ/ExbB proton channel family BG259_25455 PF01618 MotA/TolQ/ExbB proton channel family BG259_25465 PF07715 TonB-dependent Receptor Plug Domain BG259_25465 PF00593 TonB dependent receptor BG259_25470 PF16750 Sensor domain of 2-component histidine kinase BG259_25470 PF00672 HAMP domain BG259_25470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_25470 PF00512 His Kinase A (phospho-acceptor) domain BG259_25475 PF00486 Transcriptional regulatory protein, C terminal BG259_25475 PF00072 Response regulator receiver domain BG259_25485 PF03009 Glycerophosphoryl diester phosphodiesterase family BG259_25495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BG259_25495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BG259_25500 PF10928 Protein of unknown function (DUF2810) BG259_25550 PF04013 Putative SAM-dependent RNA methyltransferase BG259_25555 PF01523 Putative modulator of DNA gyrase BG259_25560 PF01523 Putative modulator of DNA gyrase BG259_25565 PF08543 Phosphomethylpyrimidine kinase BG259_25570 PF00005 ABC transporter BG259_25575 PF00528 Binding-protein-dependent transport system inner membrane component BG259_25580 PF09084 NMT1/THI5 like BG259_25585 PF03070 TENA/THI-4/PQQC family BG259_25590 PF02110 Hydroxyethylthiazole kinase family BG259_25595 PF02581 Thiamine monophosphate synthase BG259_25600 PF01569 PAP2 superfamily BG259_25605 PF18364 Molybdopterin oxidoreductase N-terminal domain BG259_25605 PF01568 Molydopterin dinucleotide binding domain BG259_25605 PF00384 Molybdopterin oxidoreductase BG259_25610 PF03264 NapC/NirT cytochrome c family, N-terminal region BG259_25640 PF00583 Acetyltransferase (GNAT) family BG259_25685 PF00392 Bacterial regulatory proteins, gntR family BG259_25685 PF00155 Aminotransferase class I and II BG259_25690 PF04231 Endonuclease I BG259_25695 PF00128 Alpha amylase, catalytic domain BG259_25695 PF02903 Alpha amylase, N-terminal ig-like domain BG259_25710 PF02264 LamB porin BG259_25715 PF00128 Alpha amylase, catalytic domain BG259_25715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG259_25720 PF00990 Diguanylate cyclase, GGDEF domain BG259_25725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BG259_25725 PF14824 Sirohaem biosynthesis protein central BG259_25725 PF10414 Sirohaem synthase dimerisation region BG259_25730 PF17179 4Fe-4S dicluster domain BG259_25735 PF00175 Oxidoreductase NAD-binding domain BG259_25735 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BG259_25740 PF13187 4Fe-4S dicluster domain BG259_25740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BG259_25740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BG259_25755 PF03313 Serine dehydratase alpha chain BG259_25755 PF03315 Serine dehydratase beta chain BG259_25760 PF00474 Sodium:solute symporter family BG259_25765 PF07690 Major Facilitator Superfamily BG259_25780 PF00356 Bacterial regulatory proteins, lacI family BG259_25790 PF07690 Major Facilitator Superfamily BG259_25805 PF00892 EamA-like transporter family BG259_25810 PF07715 TonB-dependent Receptor Plug Domain BG259_25810 PF00593 TonB dependent receptor BG259_25815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_25815 PF03466 LysR substrate binding domain BG259_25820 PF01497 Periplasmic binding protein BG259_25830 PF01032 FecCD transport family BG259_25835 PF01032 FecCD transport family BG259_25840 PF00005 ABC transporter BG259_25845 PF00440 Bacterial regulatory proteins, tetR family BG259_25845 PF08360 QacR-like protein, C-terminal region BG259_25855 PF13533 Biotin-lipoyl like BG259_25865 PF04225 Opacity-associated protein A LysM-like domain BG259_25865 PF01551 Peptidase family M23 BG259_25890 PF00675 Insulinase (Peptidase family M16) BG259_25890 PF05193 Peptidase M16 inactive domain BG259_25895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_25895 PF00672 HAMP domain BG259_25895 PF17200 Single Cache domain 2 BG259_25910 PF02566 OsmC-like protein BG259_25915 PF01047 MarR family BG259_25920 PF00578 AhpC/TSA family BG259_25920 PF10417 C-terminal domain of 1-Cys peroxiredoxin BG259_25925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BG259_25925 PF13192 Thioredoxin domain BG259_25965 PF03466 LysR substrate binding domain BG259_25965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_25970 PF16657 Maltogenic Amylase, C-terminal domain BG259_25970 PF00128 Alpha amylase, catalytic domain BG259_25975 PF00128 Alpha amylase, catalytic domain BG259_25975 PF02903 Alpha amylase, N-terminal ig-like domain BG259_25975 PF16657 Maltogenic Amylase, C-terminal domain BG259_25980 PF01547 Bacterial extracellular solute-binding protein BG259_26015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_26020 PF02743 Cache domain BG259_26020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_26020 PF00672 HAMP domain BG259_26030 PF01810 LysE type translocator BG259_26035 PF13404 AsnC-type helix-turn-helix domain BG259_26035 PF01037 Lrp/AsnC ligand binding domain BG259_26050 PF03473 MOSC domain BG259_26050 PF03475 3-alpha domain BG259_26055 PF13673 Acetyltransferase (GNAT) domain BG259_26065 PF06629 MltA-interacting protein MipA BG259_26070 PF00270 DEAD/DEAH box helicase BG259_26070 PF00271 Helicase conserved C-terminal domain BG259_26080 PF04542 Sigma-70 region 2 BG259_26080 PF08281 Sigma-70, region 4 BG259_26085 PF00155 Aminotransferase class I and II BG259_26100 PF13443 Cro/C1-type HTH DNA-binding domain BG259_26105 PF03786 D-mannonate dehydratase (UxuA) BG259_26110 PF07729 FCD domain BG259_26110 PF00392 Bacterial regulatory proteins, gntR family BG259_26115 PF03480 Bacterial extracellular solute-binding protein, family 7 BG259_26120 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BG259_26125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BG259_26130 PF08125 Mannitol dehydrogenase C-terminal domain BG259_26130 PF01232 Mannitol dehydrogenase Rossmann domain BG259_26135 PF02614 Glucuronate isomerase BG259_26140 PF00294 pfkB family carbohydrate kinase BG259_26145 PF01081 KDPG and KHG aldolase BG259_26150 PF10688 Bacterial inner membrane protein BG259_26165 PF00664 ABC transporter transmembrane region BG259_26165 PF00005 ABC transporter BG259_26175 PF01037 Lrp/AsnC ligand binding domain BG259_26220 PF00474 Sodium:solute symporter family BG259_26230 PF14850 DNA-binding domain of Proline dehydrogenase BG259_26230 PF01619 Proline dehydrogenase BG259_26230 PF00171 Aldehyde dehydrogenase family BG259_26230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BG259_26235 PF12833 Helix-turn-helix domain BG259_26245 PF01243 Pyridoxamine 5'-phosphate oxidase BG259_26245 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BG259_26250 PF00512 His Kinase A (phospho-acceptor) domain BG259_26250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_26250 PF02743 Cache domain BG259_26255 PF02954 Bacterial regulatory protein, Fis family BG259_26255 PF00072 Response regulator receiver domain BG259_26255 PF00158 Sigma-54 interaction domain BG259_26260 PF00529 HlyD membrane-fusion protein of T1SS BG259_26275 PF00005 ABC transporter BG259_26275 PF03412 Peptidase C39 family BG259_26275 PF00664 ABC transporter transmembrane region BG259_26285 PF03358 NADPH-dependent FMN reductase BG259_26290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BG259_26295 PF00246 Zinc carboxypeptidase BG259_26305 PF03466 LysR substrate binding domain BG259_26305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_26310 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_26320 PF08281 Sigma-70, region 4 BG259_26320 PF04542 Sigma-70 region 2 BG259_26355 PF01618 MotA/TolQ/ExbB proton channel family BG259_26360 PF02472 Biopolymer transport protein ExbD/TolR BG259_26365 PF03544 Gram-negative bacterial TonB protein C-terminal BG259_26370 PF13718 GNAT acetyltransferase 2 BG259_26370 PF05127 Helicase BG259_26375 PF08775 ParB family BG259_26375 PF02195 ParB-like nuclease domain BG259_26380 PF13614 AAA domain BG259_26380 PF18607 ParA helix turn helix domain BG259_26395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_26395 PF00005 ABC transporter BG259_26400 PF00005 ABC transporter BG259_26400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BG259_26410 PF00925 GTP cyclohydrolase II BG259_26410 PF08719 Domain of unknown function (DUF1768) BG259_26420 PF00512 His Kinase A (phospho-acceptor) domain BG259_26420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_26420 PF01627 Hpt domain BG259_26420 PF00072 Response regulator receiver domain BG259_26420 PF00672 HAMP domain BG259_26420 PF17149 Periplasmic sensor domain found in signal transduction proteins BG259_26430 PF01709 Transcriptional regulator BG259_26435 PF01098 Cell cycle protein BG259_26450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_26455 PF03466 LysR substrate binding domain BG259_26455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_26465 PF00005 ABC transporter BG259_26485 PF06580 Histidine kinase BG259_26485 PF07694 5TMR of 5TMR-LYT BG259_26485 PF13492 GAF domain BG259_26485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BG259_26490 PF04397 LytTr DNA-binding domain BG259_26490 PF00072 Response regulator receiver domain BG259_26500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BG259_26505 PF00672 HAMP domain BG259_26505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_26505 PF17200 Single Cache domain 2 BG259_26520 PF00132 Bacterial transferase hexapeptide (six repeats) BG259_26525 PF03616 Sodium/glutamate symporter BG259_26540 PF00005 ABC transporter BG259_26545 PF00155 Aminotransferase class I and II BG259_26545 PF00392 Bacterial regulatory proteins, gntR family BG259_26550 PF03616 Sodium/glutamate symporter BG259_26560 PF00455 DeoR C terminal sensor domain BG259_26560 PF08220 DeoR-like helix-turn-helix domain BG259_26565 PF03611 PTS system sugar-specific permease component BG259_26570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BG259_26575 PF00596 Class II Aldolase and Adducin N-terminal domain BG259_26585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BG259_26590 PF01261 Xylose isomerase-like TIM barrel BG259_26605 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BG259_26620 PF03466 LysR substrate binding domain BG259_26620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_26625 PF07681 DoxX BG259_26635 PF00730 HhH-GPD superfamily base excision DNA repair protein BG259_26635 PF06029 AlkA N-terminal domain BG259_26640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BG259_26640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BG259_26675 PF00005 ABC transporter BG259_26685 PF08220 DeoR-like helix-turn-helix domain BG259_26685 PF00455 DeoR C terminal sensor domain BG259_26690 PF08220 DeoR-like helix-turn-helix domain BG259_26690 PF00455 DeoR C terminal sensor domain BG259_26695 PF08013 Tagatose 6 phosphate kinase BG259_26700 PF01380 SIS domain BG259_26705 PF03830 PTS system sorbose subfamily IIB component BG259_26710 PF03609 PTS system sorbose-specific iic component BG259_26715 PF03613 PTS system mannose/fructose/sorbose family IID component BG259_26720 PF03610 PTS system fructose IIA component BG259_26725 PF01979 Amidohydrolase family BG259_26730 PF01116 Fructose-bisphosphate aldolase class-II BG259_26750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BG259_26775 PF03600 Citrate transporter BG259_26795 PF08329 Chitinase A, N-terminal domain BG259_26795 PF00704 Glycosyl hydrolases family 18 BG259_26805 PF06865 Pyrimidine/purine nucleoside phosphorylase BG259_26815 PF00990 Diguanylate cyclase, GGDEF domain BG259_26815 PF00563 EAL domain BG259_26815 PF03707 Bacterial signalling protein N terminal repeat BG259_26820 PF02264 LamB porin BG259_26825 PF00356 Bacterial regulatory proteins, lacI family BG259_26835 PF00528 Binding-protein-dependent transport system inner membrane component BG259_26840 PF00528 Binding-protein-dependent transport system inner membrane component BG259_26845 PF00232 Glycosyl hydrolase family 1 BG259_26850 PF00005 ABC transporter BG259_26850 PF17912 MalK OB fold domain BG259_26855 PF00356 Bacterial regulatory proteins, lacI family BG259_26860 PF01554 MatE BG259_26865 PF00849 RNA pseudouridylate synthase BG259_26890 PF00990 Diguanylate cyclase, GGDEF domain BG259_26890 PF17152 Periplasmic sensor domain BG259_26900 PF05656 Protein of unknown function (DUF805) BG259_26910 PF00756 Putative esterase BG259_26915 PF08240 Alcohol dehydrogenase GroES-like domain BG259_26915 PF00107 Zinc-binding dehydrogenase BG259_26920 PF00797 N-acetyltransferase BG259_26930 PF03466 LysR substrate binding domain BG259_26930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_26935 PF04954 Siderophore-interacting protein BG259_26935 PF08021 Siderophore-interacting FAD-binding domain BG259_26940 PF00326 Prolyl oligopeptidase family BG259_26945 PF01810 LysE type translocator BG259_26950 PF01037 Lrp/AsnC ligand binding domain BG259_26955 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BG259_26955 PF18416 N-acetylglucosamine binding protein domain 2 BG259_26965 PF00893 Small Multidrug Resistance protein BG259_26990 PF13599 Pentapeptide repeats (9 copies) BG259_26995 PF03922 OmpW family BG259_27000 PF16868 NMT1-like family BG259_27010 PF13533 Biotin-lipoyl like BG259_27015 PF07690 Major Facilitator Superfamily BG259_27025 PF12706 Beta-lactamase superfamily domain BG259_27035 PF01204 Trehalase BG259_27050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BG259_27060 PF03974 Ecotin BG259_27065 PF12833 Helix-turn-helix domain BG259_27075 PF00593 TonB dependent receptor BG259_27075 PF07715 TonB-dependent Receptor Plug Domain BG259_27080 PF00664 ABC transporter transmembrane region BG259_27080 PF00005 ABC transporter BG259_27085 PF00005 ABC transporter BG259_27085 PF00664 ABC transporter transmembrane region BG259_27100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_27100 PF03466 LysR substrate binding domain BG259_27120 PF13419 Haloacid dehalogenase-like hydrolase BG259_27150 PF01979 Amidohydrolase family BG259_27160 PF17853 GGDEF-like domain BG259_27160 PF05651 Putative sugar diacid recognition BG259_27160 PF13556 PucR C-terminal helix-turn-helix domain BG259_27165 PF02595 Glycerate kinase family BG259_27170 PF18494 Pullulanase Ins domain BG259_27170 PF03714 Bacterial pullanase-associated domain BG259_27170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG259_27170 PF11852 Domain of unknown function (DUF3372) BG259_27170 PF17967 Pullulanase N2 domain BG259_27185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BG259_27185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BG259_27185 PF01276 Orn/Lys/Arg decarboxylase, major domain BG259_27190 PF13520 Amino acid permease BG259_27200 PF08543 Phosphomethylpyrimidine kinase BG259_27210 PF01144 Coenzyme A transferase BG259_27215 PF01144 Coenzyme A transferase BG259_27220 PF00108 Thiolase, N-terminal domain BG259_27220 PF02803 Thiolase, C-terminal domain BG259_27225 PF01261 Xylose isomerase-like TIM barrel BG259_27235 PF03466 LysR substrate binding domain BG259_27235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_27240 PF00083 Sugar (and other) transporter BG259_27245 PF01261 Xylose isomerase-like TIM barrel BG259_27250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BG259_27250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BG259_27250 PF00205 Thiamine pyrophosphate enzyme, central domain BG259_27255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG259_27255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_27260 PF00294 pfkB family carbohydrate kinase BG259_27270 PF01116 Fructose-bisphosphate aldolase class-II BG259_27285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BG259_27285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BG259_27290 PF00375 Sodium:dicarboxylate symporter family BG259_27295 PF03193 RsgA GTPase BG259_27300 PF02378 Phosphotransferase system, EIIC BG259_27300 PF00367 phosphotransferase system, EIIB BG259_27310 PF02630 SCO1/SenC BG259_27325 PF17874 MalT-like TPR region BG259_27325 PF00196 Bacterial regulatory proteins, luxR family BG259_27335 PF00343 Carbohydrate phosphorylase BG259_27340 PF02446 4-alpha-glucanotransferase BG259_27345 PF00128 Alpha amylase, catalytic domain BG259_27345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BG259_27345 PF02806 Alpha amylase, C-terminal all-beta domain BG259_27350 PF00912 Transglycosylase BG259_27355 PF00128 Alpha amylase, catalytic domain BG259_27370 PF07670 Nucleoside recognition BG259_27375 PF07670 Nucleoside recognition BG259_27380 PF01546 Peptidase family M20/M25/M40 BG259_27380 PF07687 Peptidase dimerisation domain BG259_27385 PF06803 Protein of unknown function (DUF1232) BG259_27390 PF00375 Sodium:dicarboxylate symporter family BG259_27420 PF03466 LysR substrate binding domain BG259_27420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BG259_27425 PF08803 Putative mono-oxygenase ydhR BG259_27435 PF13614 AAA domain BG259_27435 PF02706 Chain length determinant protein BG259_27435 PF13807 G-rich domain on putative tyrosine kinase BG259_27440 PF01451 Low molecular weight phosphotyrosine protein phosphatase BG259_27445 PF10531 SLBB domain BG259_27445 PF02563 Polysaccharide biosynthesis/export protein BG259_27445 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BG259_27450 PF00881 Nitroreductase family BG259_27455 PF01914 MarC family integral membrane protein BG259_27460 PF08220 DeoR-like helix-turn-helix domain BG259_27460 PF00455 DeoR C terminal sensor domain BG259_27465 PF07690 Major Facilitator Superfamily BG259_27550 PF02794 RTX toxin acyltransferase family BG259_27570 PF14319 Transposase zinc-binding domain BG259_27570 PF04986 Putative transposase BG259_27580 PF02796 Helix-turn-helix domain of resolvase BG259_27580 PF00239 Resolvase, N terminal domain BG259_27600 PF14319 Transposase zinc-binding domain BG259_27600 PF04986 Putative transposase BG259_27615 PF05736 OprF membrane domain BG259_27615 PF00691 OmpA family BG259_27635 PF01527 Transposase BG259_27660 PF00672 HAMP domain BG259_27660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_27660 PF12729 Four helix bundle sensory module for signal transduction BG259_27685 PF07015 VirC1 protein BG259_27690 PF04754 Putative transposase, YhgA-like BG259_27735 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer BG259_27750 PF06834 TraU protein BG259_27765 PF06986 Type-1V conjugative transfer system mating pair stabilisation BG259_27780 PF13728 F plasmid transfer operon protein BG259_27795 PF06122 Conjugative relaxosome accessory transposon protein BG259_27820 PF10412 Type IV secretion-system coupling protein DNA-binding domain BG259_27820 PF12615 F sex factor protein N terminal BG259_27865 PF07057 DNA helicase TraI BG259_27865 PF18272 single-stranded DNA binding TraI N-terminal subdomain BG259_27865 PF08751 TrwC relaxase BG259_27865 PF18340 DNA relaxase TraI 2B/2B-like domain BG259_27910 PF17762 HTH domain found in ParB protein BG259_27910 PF02195 ParB-like nuclease domain BG259_27960 PF01848 Hok/gef family BG259_27985 PF13358 DDE superfamily endonuclease BG259_27990 PF00005 ABC transporter BG259_27990 PF03412 Peptidase C39 family BG259_27990 PF00664 ABC transporter transmembrane region BG259_28000 PF03412 Peptidase C39 family BG259_28000 PF00005 ABC transporter BG259_28000 PF00664 ABC transporter transmembrane region BG259_28005 PF01548 Transposase BG259_28005 PF02371 Transposase IS116/IS110/IS902 family BG259_28125 PF00672 HAMP domain BG259_28125 PF12729 Four helix bundle sensory module for signal transduction BG259_28125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BG259_28140 PF11871 Domain of unknown function (DUF3391) BG259_28140 PF01966 HD domain BG259_28150 PF14319 Transposase zinc-binding domain BG259_28150 PF04986 Putative transposase BG259_28155 PF14319 Transposase zinc-binding domain BG259_28155 PF04986 Putative transposase BG259_28185 PF01848 Hok/gef family BG259_28200 PF00005 ABC transporter BG259_28200 PF03412 Peptidase C39 family BG259_28200 PF00664 ABC transporter transmembrane region BG259_28205 PF00529 HlyD membrane-fusion protein of T1SS BG259_28205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BG259_28210 PF10502 Signal peptidase, peptidase S26 BG259_28220 PF00239 Resolvase, N terminal domain BG259_28220 PF02796 Helix-turn-helix domain of resolvase BG259_28235 PF13614 AAA domain BG259_28240 PF04754 Putative transposase, YhgA-like BG259_28295 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer BG259_28305 PF06834 TraU protein BG259_28325 PF06986 Type-1V conjugative transfer system mating pair stabilisation BG259_28350 PF13728 F plasmid transfer operon protein BG259_28360 PF06122 Conjugative relaxosome accessory transposon protein BG259_28380 PF01848 Hok/gef family BG259_28395 PF12615 F sex factor protein N terminal BG259_28395 PF10412 Type IV secretion-system coupling protein DNA-binding domain BG259_28425 PF18272 single-stranded DNA binding TraI N-terminal subdomain BG259_28425 PF07057 DNA helicase TraI BG259_28425 PF08751 TrwC relaxase BG259_28425 PF18340 DNA relaxase TraI 2B/2B-like domain BG259_28440 PF01464 Transglycosylase SLT domain BG259_28465 PF02195 ParB-like nuclease domain BG259_28465 PF17762 HTH domain found in ParB protein BG259_28530 PF13651 Adenine-specific methyltransferase EcoRI BG259_28600 PF13614 AAA domain BG259_28625 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BG259_28630 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BG259_28700 PF02796 Helix-turn-helix domain of resolvase BG259_28700 PF00239 Resolvase, N terminal domain BG259_28705 PF02631 RecX family BG259_28710 PF12161 HsdM N-terminal domain BG259_28710 PF02384 N-6 DNA Methylase BG259_28730 PF01464 Transglycosylase SLT domain BG259_28745 PF08751 TrwC relaxase BG259_28745 PF07057 DNA helicase TraI BG259_28745 PF18340 DNA relaxase TraI 2B/2B-like domain BG259_28745 PF18272 single-stranded DNA binding TraI N-terminal subdomain BG259_28775 PF12615 F sex factor protein N terminal BG259_28775 PF10412 Type IV secretion-system coupling protein DNA-binding domain BG259_28785 PF01848 Hok/gef family BG259_28805 PF06122 Conjugative relaxosome accessory transposon protein BG259_28815 PF13728 F plasmid transfer operon protein BG259_28835 PF06986 Type-1V conjugative transfer system mating pair stabilisation BG259_28860 PF06834 TraU protein BG259_28870 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer