locus-tag	class	description
BG259_00015	COG0735	belongs to the Fur family
BG259_00025	COG0716	FMN binding
BG259_00035	COG0596	Alpha beta hydrolase
BG259_00045	COG0033	Phosphoglucomutase
BG259_00060	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BG259_00070	COG2009	succinate dehydrogenase
BG259_00075	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BG259_00080	COG1053	succinate dehydrogenase
BG259_00090	COG0567	Dehydrogenase, E1 component
BG259_00095	COG0508	dehydrogenase complex catalyzes the overall conversion of
BG259_00110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BG259_00115	COG1121	(ABC) transporter
BG259_00120	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BG259_00125	COG4977	sequence-specific DNA binding
BG259_00130	COG1918	ferrous iron import across plasma membrane
BG259_00160	COG3102	Protein conserved in bacteria
BG259_00165	COG0788	formyltetrahydrofolate deformylase activity
BG259_00170	COG1199	ATP-dependent helicase activity
BG259_00175	COG1214	PFAM Peptidase M22, glycoprotease
BG259_00185	COG3065	identical protein binding
BG259_00190	COG2267	carboxylic ester hydrolase activity
BG259_00195	COG0318	PFAM AMP-dependent synthetase and ligase
BG259_00200	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BG259_00205	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BG259_00210	COG2894	cell division
BG259_00225	COG2951	lytic endotransglycosylase activity
BG259_00235	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BG259_00270	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_00275	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BG259_00305	COG2986	histidine ammonia-lyase
BG259_00310	COG1216	Glycosyl transferase, family 2
BG259_00330	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BG259_00335	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BG259_00365	COG2226	methyltransferase
BG259_00380	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_00390	COG1169	isochorismate synthase
BG259_00395	COG1021	2,3-dihydroxybenzoate-AMP ligase
BG259_00400	COG3433	isochorismatase activity
BG259_00400	COG1535	isochorismatase
BG259_00405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BG259_00405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BG259_00420	COG4771	TonB-dependent receptor
BG259_00425	COG1253	flavin adenine dinucleotide binding
BG259_00430	COG0513	Belongs to the DEAD box helicase family
BG259_00435	COG0569	domain protein
BG259_00440	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BG259_00455	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BG259_00460	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BG259_00465	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BG259_00505	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BG259_00510	COG0776	regulation of translation
BG259_00515	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BG259_00540	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BG259_00545	COG0436	Aminotransferase
BG259_00550	COG1169	isochorismate synthase
BG259_00560	COG0596	Alpha beta hydrolase
BG259_00565	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BG259_00570	COG1441	menaquinone biosynthetic process
BG259_00580	COG2190	(PTS) system
BG259_00580	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_00580	COG1263	PTS System
BG259_00585	COG0583	DNA-binding transcription factor activity
BG259_00600	COG2855	membrane
BG259_00655	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_00680	COG1522	sequence-specific DNA binding
BG259_00690	COG1946	Acyl-CoA thioesterase
BG259_00695	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BG259_00710	COG3706	GGDEF domain
BG259_00725	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BG259_00730	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BG259_00735	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BG259_00740	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
BG259_00745	COG0517	IMP dehydrogenase activity
BG259_00745	COG0516	GMP reductase activity
BG259_00755	COG2217	Heavy metal translocating P-type atpase
BG259_00775	COG0537	adenosine 5'-monophosphoramidase activity
BG259_00805	COG1252	NADH dehydrogenase
BG259_00820	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BG259_00830	COG4591	ABC-type transport system involved in lipoprotein release permease component
BG259_00835	COG1136	(ABC) transporter
BG259_00840	COG4591	ABC-type transport system involved in lipoprotein release permease component
BG259_00855	COG1132	(ABC) transporter
BG259_00875	COG2719	SpoVR family
BG259_00880	COG2718	Belongs to the UPF0229 family
BG259_00885	COG2766	serine protein kinase
BG259_00900	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BG259_00910	COG1882	Formate acetyltransferase
BG259_00935	COG4215	(ABC) transporter
BG259_00945	COG0708	Exodeoxyribonuclease III
BG259_00950	COG0840	transmembrane signaling receptor activity
BG259_00965	COG0730	response to heat
BG259_00970	COG1199	ATP-dependent helicase activity
BG259_00980	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BG259_00985	COG1187	pseudouridine synthase activity
BG259_00995	COG1278	Cold shock
BG259_01005	COG0542	response to heat
BG259_01010	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BG259_01040	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BG259_01045	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG259_01050	COG0297	glycogen (starch) synthase activity
BG259_01070	COG3070	regulator of competence-specific genes
BG259_01085	COG0745	RESPONSE REGULATOR receiver
BG259_01090	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BG259_01095	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BG259_01105	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BG259_01110	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BG259_01125	COG0189	ligase activity
BG259_01125	COG4067	protein conserved in archaea
BG259_01140	COG1801	Protein of unknown function DUF72
BG259_01155	COG0840	transmembrane signaling receptor activity
BG259_01160	COG0632	four-way junction helicase activity
BG259_01170	COG1271	oxidase subunit
BG259_01175	COG1294	oxidase, subunit
BG259_01180	COG4890	Cyd operon protein YbgT
BG259_01190	COG0824	Thioesterase
BG259_01195	COG0811	peptide transport
BG259_01210	COG0823	Involved in the tonB-independent uptake of proteins
BG259_01215	COG2885	chlorophyll binding
BG259_01220	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BG259_01235	COG0673	inositol 2-dehydrogenase activity
BG259_01240	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BG259_01240	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_01240	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_01245	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_01250	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_01260	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BG259_01265	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BG259_01270	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BG259_01275	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_01280	COG2207	Transcriptional regulator
BG259_01285	COG0371	Dehydrogenase
BG259_01290	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BG259_01310	COG3766	membrane
BG259_01320	COG0754	glutathionylspermidine amidase activity
BG259_01330	COG5002	protein histidine kinase activity
BG259_01330	COG0784	Response regulator, receiver
BG259_01410	COG4669	(LipO)protein
BG259_01455	COG4792	protein secretion
BG259_01460	COG4791	protein targeting
BG259_01465	COG4794	Type iii secretion
BG259_01470	COG4790	Type iii secretion
BG259_01475	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG259_01540	COG0457	Tetratricopeptide repeat
BG259_01555	COG0789	Transcriptional regulator
BG259_01560	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BG259_01575	COG1263	PTS System
BG259_01575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_01580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_01585	COG1621	beta-fructofuranosidase activity
BG259_01590	COG2824	Alkylphosphonate utilization operon protein PhnA
BG259_01605	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BG259_01630	COG0534	Mate efflux family protein
BG259_01635	COG0444	Belongs to the ABC transporter superfamily
BG259_01640	COG4608	Belongs to the ABC transporter superfamily
BG259_01645	COG0747	negative chemotaxis
BG259_01660	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BG259_01675	COG2076	Multidrug Resistance protein
BG259_01700	COG0583	DNA-binding transcription factor activity
BG259_01705	COG4771	TonB-dependent receptor
BG259_01725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_01730	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_01740	COG2186	Transcriptional regulator
BG259_01755	COG1288	antiporter activity
BG259_01785	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BG259_01800	COG2176	DNA-directed DNA polymerase activity
BG259_01805	COG0517	IMP dehydrogenase activity
BG259_01810	COG2186	Transcriptional regulator
BG259_01815	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_01820	COG2186	Transcriptional regulator
BG259_01840	COG1917	Cupin 2, conserved barrel domain protein
BG259_01845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_01850	COG0800	Aldolase
BG259_01855	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BG259_01870	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BG259_01895	COG3568	Endonuclease Exonuclease Phosphatase
BG259_01905	COG4934	collagen metabolic process
BG259_01940	COG0686	Belongs to the AlaDH PNT family
BG259_01950	COG1674	ftsk spoiiie
BG259_01960	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BG259_01980	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BG259_01985	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BG259_02020	COG0300	oxidoreductase activity
BG259_02035	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BG259_02045	COG2268	Band 7 protein
BG259_02055	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BG259_02065	COG0482	sulfurtransferase activity
BG259_02075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_02085	COG1757	Na H antiporter
BG259_02095	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BG259_02100	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BG259_02105	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BG259_02105	COG0131	Imidazoleglycerol-phosphate dehydratase
BG259_02110	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BG259_02115	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BG259_02120	COG0107	imidazoleglycerol-phosphate synthase activity
BG259_02125	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BG259_02125	COG0140	phosphoribosyl-ATP diphosphatase activity
BG259_02130	COG3012	SEC-C Motif Domain Protein
BG259_02135	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BG259_02140	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BG259_02145	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BG259_02150	COG0215	cysteine-tRNA ligase activity
BG259_02155	COG1435	thymidine kinase activity
BG259_02160	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BG259_02185	COG2116	formate transmembrane transporter activity
BG259_02190	COG0390	transport system, permease component
BG259_02195	COG4459	periplasmic nitrate reductase
BG259_02200	COG3005	denitrification pathway
BG259_02205	COG0243	molybdopterin cofactor binding
BG259_02220	COG1121	(ABC) transporter
BG259_02225	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BG259_02230	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BG259_02235	COG1227	inorganic diphosphatase activity
BG259_02245	COG4172	Belongs to the ABC transporter superfamily
BG259_02255	COG4171	peptide transport system, permease
BG259_02260	COG4168	peptide transport system, permease
BG259_02270	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BG259_02275	COG1842	Phage shock protein A
BG259_02305	COG2818	Glycosylase
BG259_02310	COG5380	lipid catabolic process
BG259_02315	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BG259_02320	COG0626	cystathionine gamma-synthase activity
BG259_02330	COG0733	neurotransmitter:sodium symporter activity
BG259_02340	COG0564	pseudouridine synthase activity
BG259_02350	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BG259_02355	COG1151	hydroxylamine reductase activity
BG259_02360	COG3604	Transcriptional regulator
BG259_02365	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BG259_02370	COG4136	ATPase activity
BG259_02375	COG4135	transport system, permease component
BG259_02380	COG4134	Bacterial extracellular solute-binding protein
BG259_02385	COG0398	Pfam SNARE associated Golgi protein
BG259_02395	COG0493	'glutamate synthase
BG259_02420	COG0659	secondary active sulfate transmembrane transporter activity
BG259_02430	COG3313	Fe-S protein
BG259_02470	COG2205	protein histidine kinase activity
BG259_02475	COG0745	RESPONSE REGULATOR receiver
BG259_02485	COG1061	Type III restriction enzyme res subunit
BG259_02490	COG1187	pseudouridine synthase activity
BG259_02495	COG2814	Major facilitator Superfamily
BG259_02505	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BG259_02515	COG1609	Transcriptional regulator
BG259_02520	COG0702	epimerase
BG259_02525	COG0534	Mate efflux family protein
BG259_02530	COG4181	ATPase activity
BG259_02560	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BG259_02570	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BG259_02580	COG1737	Transcriptional regulator
BG259_02585	COG0076	glutamate decarboxylase activity
BG259_02595	COG2431	L-lysine efflux transmembrane transporter activity
BG259_02605	COG3070	regulator of competence-specific genes
BG259_02620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_02620	COG4191	Histidine kinase
BG259_02630	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BG259_02640	COG5002	protein histidine kinase activity
BG259_02640	COG5001	Diguanylate cyclase
BG259_02640	COG3447	MASE1 domain protein
BG259_02660	COG0583	DNA-binding transcription factor activity
BG259_02665	COG2610	gluconate transmembrane transporter activity
BG259_02675	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BG259_02680	COG4988	ABC transporter
BG259_02685	COG0492	ferredoxin-NADP+ reductase activity
BG259_02705	COG3706	GGDEF domain
BG259_02710	COG0471	metal ion transport
BG259_02715	COG2949	membrane
BG259_02725	COG1643	Atp-dependent helicase
BG259_02770	COG0471	metal ion transport
BG259_02775	COG4191	Histidine kinase
BG259_02775	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_02785	COG5001	Diguanylate cyclase
BG259_02785	COG3300	MHYT domain
BG259_02795	COG1280	lysine exporter protein (LysE YggA)
BG259_02800	COG1328	CTP reductase activity
BG259_02805	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BG259_02815	COG0861	Integral membrane protein TerC family
BG259_02825	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG259_02835	COG1454	alcohol dehydrogenase
BG259_02840	COG0814	amino acid
BG259_02855	COG1120	ATPase activity
BG259_02860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BG259_02865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_02870	COG4774	siderophore transport
BG259_02885	COG1132	(ABC) transporter
BG259_02890	COG1132	(ABC) transporter
BG259_02905	COG0583	DNA-binding transcription factor activity
BG259_02930	COG0443	Heat shock 70 kDa protein
BG259_02935	COG0443	Heat shock 70 kDa protein
BG259_02945	COG3706	GGDEF domain
BG259_02975	COG0243	molybdopterin cofactor binding
BG259_02980	COG0437	4 iron, 4 sulfur cluster binding
BG259_02985	COG3302	dmso reductase anchor subunit
BG259_03000	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BG259_03005	COG1643	Atp-dependent helicase
BG259_03030	COG3063	Type IV pilus biogenesis stability protein PilW
BG259_03055	COG0531	amino acid
BG259_03060	COG1280	lysine exporter protein (LysE YggA)
BG259_03065	COG0583	DNA-binding transcription factor activity
BG259_03070	COG1560	Kdo2-lipid A biosynthetic process
BG259_03090	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BG259_03095	COG2197	response regulator
BG259_03130	COG1280	lysine exporter protein (LysE YggA)
BG259_03150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_03160	COG0730	response to heat
BG259_03185	COG0456	acetyltransferase
BG259_03195	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG259_03290	COG3501	Rhs element vgr protein
BG259_03305	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BG259_03310	COG0372	Belongs to the citrate synthase family
BG259_03320	COG2828	Protein conserved in bacteria
BG259_03355	COG0561	phosphatase activity
BG259_03360	COG0602	queuosine metabolic process
BG259_03370	COG2199	diguanylate cyclase activity
BG259_03370	COG2203	Gaf domain
BG259_03400	COG3064	Membrane
BG259_03410	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BG259_03415	COG1215	transferase activity, transferring glycosyl groups
BG259_03420	COG0297	glycogen (starch) synthase activity
BG259_03450	COG0438	transferase activity, transferring glycosyl groups
BG259_03460	COG2204	response regulator
BG259_03480	COG2885	chlorophyll binding
BG259_03490	COG1793	dna ligase
BG259_03500	COG0534	Mate efflux family protein
BG259_03505	COG0307	riboflavin synthase, alpha
BG259_03520	COG2201	protein-glutamate methylesterase activity
BG259_03525	COG3706	GGDEF domain
BG259_03535	COG0791	NLP P60 protein
BG259_03540	COG0840	transmembrane signaling receptor activity
BG259_03585	COG1940	carbohydrate kinase activity
BG259_03595	COG0303	'Molybdopterin
BG259_03605	COG3842	ATPase activity
BG259_03610	COG4662	Binding-protein-dependent transport system inner membrane component
BG259_03620	COG2204	response regulator
BG259_03625	COG4191	Histidine kinase
BG259_03640	COG0488	(ABC) transporter
BG259_03645	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BG259_03675	COG3383	formate dehydrogenase (NAD+) activity
BG259_03675	COG0243	molybdopterin cofactor binding
BG259_03680	COG0437	4 iron, 4 sulfur cluster binding
BG259_03700	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BG259_03710	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BG259_03715	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BG259_03720	COG1177	transmembrane transport
BG259_03725	COG1176	ABC-type spermidine putrescine transport system, permease component I
BG259_03730	COG3842	ATPase activity
BG259_03740	COG2992	FlgJ-related protein
BG259_03755	COG0589	response to stress
BG259_03760	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BG259_03775	COG2217	Heavy metal translocating P-type atpase
BG259_03785	COG2010	Cytochrome c
BG259_03800	COG3278	Belongs to the heme-copper respiratory oxidase family
BG259_03920	COG1067	ATP-dependent peptidase activity
BG259_03925	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BG259_03965	COG2902	Dehydrogenase
BG259_03975	COG0308	aminopeptidase N
BG259_03990	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BG259_03995	COG1956	GAF domain-containing protein
BG259_04000	COG1132	(ABC) transporter
BG259_04005	COG2995	paraquat-inducible protein a
BG259_04010	COG3008	intermembrane lipid transfer
BG259_04035	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BG259_04055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_04060	COG4597	amino acid ABC transporter
BG259_04065	COG0765	amino acid transport
BG259_04070	COG1126	abc transporter atp-binding protein
BG259_04075	COG0670	Belongs to the BI1 family
BG259_04080	COG2920	part of a sulfur-relay system
BG259_04085	COG1254	Belongs to the acylphosphatase family
BG259_04090	COG0840	transmembrane signaling receptor activity
BG259_04180	COG5001	Diguanylate cyclase
BG259_04180	COG3300	MHYT domain
BG259_04185	COG4999	Histidine kinase
BG259_04185	COG2205	protein histidine kinase activity
BG259_04185	COG3437	response regulator, receiver
BG259_04185	COG3850	Histidine kinase
BG259_04200	COG0110	maltose O-acetyltransferase activity
BG259_04225	COG1846	Transcriptional regulator
BG259_04235	COG3247	response to pH
BG259_04240	COG0668	transmembrane transport
BG259_04255	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BG259_04315	COG4964	Belongs to the GSP D family
BG259_04340	COG2207	Transcriptional regulator
BG259_04360	COG0589	response to stress
BG259_04365	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BG259_04370	COG0363	glucosamine-6-phosphate deaminase activity
BG259_04375	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BG259_04380	COG4977	sequence-specific DNA binding
BG259_04385	COG4774	siderophore transport
BG259_04390	COG4565	transcriptional regulatory protein
BG259_04395	COG3290	protein histidine kinase activity
BG259_04410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_04430	COG0583	DNA-binding transcription factor activity
BG259_04435	COG2814	Major facilitator Superfamily
BG259_04450	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BG259_04480	COG2186	Transcriptional regulator
BG259_04495	COG0702	epimerase
BG259_04500	COG0583	DNA-binding transcription factor activity
BG259_04505	COG1404	Belongs to the peptidase S8 family
BG259_04510	COG1858	cytochrome C peroxidase
BG259_04520	COG0527	aspartate kinase activity
BG259_04525	COG0662	Cupin 2, conserved barrel domain protein
BG259_04530	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BG259_04535	COG0456	acetyltransferase
BG259_04540	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_04550	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BG259_04555	COG0534	Mate efflux family protein
BG259_04570	COG1368	sulfuric ester hydrolase activity
BG259_04600	COG1115	amino acid carrier protein
BG259_04605	COG1012	belongs to the aldehyde dehydrogenase family
BG259_04610	COG3284	Transcriptional regulator
BG259_04640	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
BG259_04645	COG3697	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BG259_04650	COG3051	citrate lyase alpha subunit
BG259_04655	COG2301	Belongs to the HpcH HpaI aldolase family
BG259_04660	COG3052	prosthetic group binding
BG259_04665	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BG259_04675	COG3630	sodium ion export across plasma membrane
BG259_04680	COG0511	ligase activity, forming carbon-carbon bonds
BG259_04680	COG5016	pyruvate
BG259_04685	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BG259_04695	COG4565	transcriptional regulatory protein
BG259_04795	COG0625	glutathione transferase activity
BG259_04805	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BG259_04820	COG2195	Cleaves the N-terminal amino acid of tripeptides
BG259_04830	COG0601	transmembrane transport
BG259_04835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG259_04840	COG0444	Belongs to the ABC transporter superfamily
BG259_04865	COG3291	Pkd domain containing protein
BG259_04890	COG1177	transmembrane transport
BG259_04895	COG1176	ABC-type spermidine putrescine transport system, permease component I
BG259_04900	COG3842	ATPase activity
BG259_04905	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BG259_04910	COG2423	ornithine cyclodeaminase activity
BG259_04920	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BG259_04925	COG3938	Belongs to the proline racemase family
BG259_04945	COG0745	RESPONSE REGULATOR receiver
BG259_04945	COG3706	GGDEF domain
BG259_04955	COG1451	nucleotide metabolic process
BG259_04985	COG0583	DNA-binding transcription factor activity
BG259_05045	COG4139	cobalamin transport
BG259_05060	COG2062	phosphohistidine phosphatase, SixA
BG259_05070	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BG259_05080	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BG259_05085	COG0702	epimerase
BG259_05100	COG2925	Exonuclease
BG259_05110	COG1346	cytolysis
BG259_05175	COG0072	phenylalanine-tRNA ligase activity
BG259_05175	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BG259_05185	COG0745	RESPONSE REGULATOR receiver
BG259_05185	COG3706	GGDEF domain
BG259_05230	COG0251	oxidation-reduction process
BG259_05240	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BG259_05265	COG2188	Transcriptional regulator
BG259_05275	COG0010	Belongs to the arginase family
BG259_05285	COG2986	histidine ammonia-lyase
BG259_05305	COG0247	lactate metabolic process
BG259_05305	COG0277	FAD linked oxidase domain protein
BG259_05340	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BG259_05475	COG3340	Belongs to the peptidase S51 family
BG259_05585	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BG259_05605	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BG259_05765	COG2026	Addiction module toxin, RelE StbE family
BG259_05785	COG1192	Involved in chromosome partitioning
BG259_06085	COG0791	NLP P60 protein
BG259_06205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG259_06220	COG3106	COG3106 Predicted ATPase
BG259_06235	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BG259_06240	COG2205	protein histidine kinase activity
BG259_06240	COG0784	Response regulator, receiver
BG259_06255	COG0814	amino acid
BG259_06260	COG1760	l-serine dehydratase
BG259_06265	COG5001	Diguanylate cyclase
BG259_06265	COG3300	MHYT domain
BG259_06275	COG2197	response regulator
BG259_06280	COG0720	synthase
BG259_06285	COG0840	transmembrane signaling receptor activity
BG259_06290	COG0017	Asparaginyl-tRNA synthetase
BG259_06305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG259_06320	COG2770	Histidine kinase
BG259_06320	COG3437	response regulator, receiver
BG259_06325	COG1448	Aminotransferase
BG259_06345	COG0840	transmembrane signaling receptor activity
BG259_06350	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_06355	COG1846	Transcriptional regulator
BG259_06380	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BG259_06395	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BG259_06400	COG3108	Peptidase M15
BG259_06405	COG2989	Protein conserved in bacteria
BG259_06430	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BG259_06440	COG4235	cytochrome complex assembly
BG259_06440	COG3088	subunit of a heme lyase
BG259_06450	COG1138	Cytochrome C-type biogenesis protein
BG259_06455	COG3301	Polysulphide reductase, NrfD
BG259_06460	COG0437	4 iron, 4 sulfur cluster binding
BG259_06470	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
BG259_06490	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BG259_06500	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BG259_06505	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BG259_06530	COG0019	diaminopimelate decarboxylase activity
BG259_06580	COG0322	excinuclease ABC activity
BG259_06585	COG2197	response regulator
BG259_06590	COG0417	DNA replication proofreading
BG259_06610	COG1187	pseudouridine synthase activity
BG259_06620	COG0009	L-threonylcarbamoyladenylate synthase
BG259_06625	COG0613	PHP domain protein
BG259_06635	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BG259_06640	COG0512	Glutamine amidotransferase of anthranilate synthase
BG259_06650	COG0135	phosphoribosylanthranilate isomerase activity
BG259_06650	COG0134	indole-3-glycerol-phosphate synthase activity
BG259_06660	COG0159	tryptophan synthase activity
BG259_06665	COG1301	dicarboxylic acid transport
BG259_06690	COG1607	acyl-coa hydrolase
BG259_06695	COG2350	Protein conserved in bacteria
BG259_06710	COG0583	DNA-binding transcription factor activity
BG259_06725	COG5001	Diguanylate cyclase
BG259_06725	COG1716	ATPase activity
BG259_06730	COG1032	radical SAM domain protein
BG259_06735	COG0446	pyridine nucleotide-disulphide oxidoreductase
BG259_06750	COG2964	Protein conserved in bacteria
BG259_06755	COG0840	transmembrane signaling receptor activity
BG259_06765	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BG259_06770	COG0463	Glycosyl transferase, family 2
BG259_06775	COG0745	RESPONSE REGULATOR receiver
BG259_06780	COG5002	protein histidine kinase activity
BG259_06780	COG3850	Histidine kinase
BG259_06815	COG1846	Transcriptional regulator
BG259_06830	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BG259_06860	COG0577	efflux transmembrane transporter activity
BG259_06860	COG1136	(ABC) transporter
BG259_06870	COG0577	efflux transmembrane transporter activity
BG259_06895	COG3153	acetyltransferase
BG259_06920	COG3118	belongs to the thioredoxin family
BG259_06925	COG4232	protein-disulfide reductase activity
BG259_06940	COG2995	paraquat-inducible protein a
BG259_06945	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BG259_06945	COG3008	intermembrane lipid transfer
BG259_06950	COG3009	Protein conserved in bacteria
BG259_07005	COG4166	transmembrane transport
BG259_07015	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BG259_07020	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BG259_07030	COG0539	negative regulation of cytoplasmic translation
BG259_07040	COG0616	signal peptide processing
BG259_07045	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_07065	COG0835	chemotaxis
BG259_07065	COG0784	Response regulator, receiver
BG259_07070	COG1940	carbohydrate kinase activity
BG259_07080	COG4667	esterase of the alpha-beta hydrolase superfamily
BG259_07090	COG0733	neurotransmitter:sodium symporter activity
BG259_07100	COG1263	PTS System
BG259_07100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_07105	COG0084	hydrolase, TatD family'
BG259_07120	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BG259_07150	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BG259_07165	COG1399	metal-binding, possibly nucleic acid-binding protein
BG259_07170	COG0424	maF-like protein
BG259_07175	COG0564	pseudouridine synthase activity
BG259_07180	COG1530	ribonuclease E activity
BG259_07190	COG0659	secondary active sulfate transmembrane transporter activity
BG259_07195	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BG259_07200	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BG259_07230	COG2186	Transcriptional regulator
BG259_07240	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BG259_07245	COG0653	protein targeting
BG259_07250	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BG259_07255	COG3706	GGDEF domain
BG259_07260	COG0366	Alpha amylase catalytic
BG259_07265	COG1122	ATPase activity
BG259_07270	COG4120	Belongs to the binding-protein-dependent transport system permease family
BG259_07295	COG0280	phosphate acetyltransferase
BG259_07295	COG0857	belongs to the CobB CobQ family
BG259_07300	COG3174	membrane
BG259_07305	COG0435	Glutathione S-transferase
BG259_07315	COG0444	Belongs to the ABC transporter superfamily
BG259_07320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG259_07325	COG0601	transmembrane transport
BG259_07335	COG0314	molybdopterin synthase activity
BG259_07340	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BG259_07350	COG0521	Mo-molybdopterin cofactor biosynthetic process
BG259_07355	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BG259_07360	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BG259_07375	COG0556	nucleotide-excision repair
BG259_07385	COG1882	Formate acetyltransferase
BG259_07390	COG4657	Part of a membrane complex involved in electron transport
BG259_07400	COG4656	Part of a membrane complex involved in electron transport
BG259_07405	COG4658	electron transport chain
BG259_07410	COG4659	FMN binding
BG259_07415	COG4660	Part of a membrane complex involved in electron transport
BG259_07420	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BG259_07425	COG0346	lactoylglutathione lyase activity
BG259_07435	COG2885	chlorophyll binding
BG259_07445	COG2056	Na+-H+ antiporter family
BG259_07480	COG3451	type IV secretory pathway VirB4
BG259_07500	COG3736	Type IV secretory pathway, component VirB8
BG259_07505	COG3504	Conjugal transfer protein
BG259_07625	COG4974	Belongs to the 'phage' integrase family
BG259_07630	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BG259_07650	COG1454	alcohol dehydrogenase
BG259_07650	COG1012	belongs to the aldehyde dehydrogenase family
BG259_07655	COG2095	MarC family integral membrane protein
BG259_07660	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BG259_07665	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BG259_07670	COG1757	Na H antiporter
BG259_07695	COG3083	sulfuric ester hydrolase activity
BG259_07705	COG0123	including yeast histone deacetylase and acetoin utilization protein
BG259_07720	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BG259_07725	COG0778	Nitroreductase
BG259_07730	COG0446	pyridine nucleotide-disulphide oxidoreductase
BG259_07730	COG1902	pentaerythritol trinitrate reductase activity
BG259_07735	COG0616	signal peptide processing
BG259_07740	COG0252	asparaginase activity
BG259_07745	COG3139	Protein of unknown function (DUF1315)
BG259_07755	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_07760	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BG259_07780	COG2226	methyltransferase
BG259_07800	COG1785	Belongs to the alkaline phosphatase family
BG259_07810	COG0346	lactoylglutathione lyase activity
BG259_07815	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BG259_07820	COG0668	transmembrane transport
BG259_07825	COG2261	transglycosylase associated protein
BG259_07835	COG2983	Belongs to the UPF0260 family
BG259_07845	COG2964	Protein conserved in bacteria
BG259_07855	COG0251	oxidation-reduction process
BG259_07860	COG0814	amino acid
BG259_07865	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BG259_07870	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BG259_07880	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BG259_07890	COG2832	Protein of unknown function (DUF454)
BG259_07895	COG0745	RESPONSE REGULATOR receiver
BG259_07900	COG0583	DNA-binding transcription factor activity
BG259_07905	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BG259_07910	COG1286	toxin biosynthetic process
BG259_07915	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BG259_07920	COG0285	dihydrofolate synthase activity
BG259_07945	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BG259_07950	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BG259_07960	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BG259_07980	COG3101	peptidyl-lysine hydroxylation
BG259_07985	COG2860	membrane
BG259_07995	COG2890	protein-(glutamine-N5) methyltransferase activity
BG259_08000	COG2840	Smr protein MutS2
BG259_08005	COG2062	phosphohistidine phosphatase, SixA
BG259_08025	COG0183	Belongs to the thiolase family
BG259_08045	COG2067	long-chain fatty acid transport protein
BG259_08050	COG2853	Lipoprotein
BG259_08055	COG4235	cytochrome complex assembly
BG259_08055	COG3088	subunit of a heme lyase
BG259_08065	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BG259_08070	COG1138	Cytochrome C-type biogenesis protein
BG259_08085	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BG259_08090	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BG259_08095	COG4133	protoheme IX ABC transporter activity
BG259_08105	COG0835	chemotaxis
BG259_08115	COG1192	Involved in chromosome partitioning
BG259_08120	COG2201	protein-glutamate methylesterase activity
BG259_08125	COG2198	Histidine kinase
BG259_08125	COG0643	Histidine kinase
BG259_08130	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BG259_08145	COG0455	bacterial-type flagellum organization
BG259_08165	COG1684	flagellar biosynthetic protein fliR
BG259_08170	COG1987	bacterial-type flagellum assembly
BG259_08225	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG259_08235	COG1677	Flagellar hook-basal body complex protein FliE
BG259_08240	COG2204	response regulator
BG259_08245	COG4191	Histidine kinase
BG259_08255	COG1516	flagellar protein fliS
BG259_08265	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BG259_08270	COG1334	flagellar protein FlaG
BG259_08275	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_08280	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_08290	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_08295	COG2211	Major facilitator Superfamily
BG259_08300	COG1486	melibiose metabolic process
BG259_08305	COG2169	Transcriptional regulator
BG259_08310	COG2837	iron assimilation
BG259_08335	COG1393	Belongs to the ArsC family
BG259_08360	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BG259_08365	COG2716	regulation of RNA biosynthetic process
BG259_08370	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BG259_08385	COG4783	chaperone-mediated protein folding
BG259_08390	COG1393	Belongs to the ArsC family
BG259_08410	COG2233	PERMEase
BG259_08415	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BG259_08420	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BG259_08430	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BG259_08435	COG0121	glutamine amidotransferase
BG259_08440	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BG259_08465	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BG259_08475	COG2226	methyltransferase
BG259_08485	COG1388	LysM domain
BG259_08485	COG0741	lytic transglycosylase activity
BG259_08500	COG0347	Belongs to the P(II) protein family
BG259_08520	COG0587	DNA-directed DNA polymerase activity
BG259_08545	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BG259_08550	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BG259_08560	COG0750	zinc metalloprotease
BG259_08570	COG0575	Belongs to the CDS family
BG259_08575	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BG259_08600	COG0024	Methionine aminopeptidase
BG259_08615	COG0564	pseudouridine synthase activity
BG259_08620	COG3098	single-species biofilm formation
BG259_08660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BG259_08685	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BG259_08700	COG1720	tRNA m6t6A37 methyltransferase activity
BG259_08725	COG0733	neurotransmitter:sodium symporter activity
BG259_08740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BG259_08745	COG0514	ATP-dependent DNA helicase (RecQ)
BG259_08750	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BG259_08755	COG0745	RESPONSE REGULATOR receiver
BG259_08755	COG3706	GGDEF domain
BG259_08765	COG1477	protein flavinylation
BG259_08775	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BG259_08795	COG0271	Belongs to the BolA IbaG family
BG259_08825	COG1595	DNA-templated transcription, initiation
BG259_08840	COG3248	Nucleoside-binding outer membrane protein
BG259_08845	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BG259_08850	COG0693	protein deglycase activity
BG259_08855	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BG259_08860	COG2166	iron-sulfur cluster assembly
BG259_08865	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BG259_08870	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BG259_08885	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BG259_08885	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BG259_08895	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BG259_08900	COG1074	ATP-dependent DNA helicase activity
BG259_08905	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BG259_08925	COG3141	response to X-ray
BG259_08940	COG2171	N-acyltransferase activity
BG259_08945	COG0584	glycerophosphoryl diester phosphodiesterase
BG259_08950	COG2271	Major facilitator Superfamily
BG259_08955	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BG259_08965	COG1349	DNA-binding transcription factor activity
BG259_08970	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BG259_08995	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BG259_09005	COG2017	converts alpha-aldose to the beta-anomer
BG259_09020	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BG259_09025	COG0768	penicillin binding
BG259_09035	COG1609	Transcriptional regulator
BG259_09040	COG3250	beta-galactosidase activity
BG259_09045	COG2731	YhcH YjgK YiaL family protein
BG259_09050	COG0531	amino acid
BG259_09055	COG0583	DNA-binding transcription factor activity
BG259_09115	COG4964	Belongs to the GSP D family
BG259_09140	COG2169	Transcriptional regulator
BG259_09145	COG1022	Amp-dependent synthetase and ligase
BG259_09155	COG0583	DNA-binding transcription factor activity
BG259_09160	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BG259_09165	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BG259_09175	COG0560	Phosphoserine phosphatase
BG259_09185	COG0813	purine-nucleoside phosphorylase activity
BG259_09195	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BG259_09205	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BG259_09210	COG0084	hydrolase, TatD family'
BG259_09215	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BG259_09220	COG3706	GGDEF domain
BG259_09240	COG3153	acetyltransferase
BG259_09265	COG0534	Mate efflux family protein
BG259_09285	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BG259_09305	COG0195	Participates in both transcription termination and antitermination
BG259_09325	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BG259_09335	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BG259_09340	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BG259_09350	COG1534	Rna-binding protein
BG259_09355	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BG259_09360	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BG259_09365	COG2027	D-alanyl-D-alanine carboxypeptidase
BG259_09375	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BG259_09380	COG0739	heme binding
BG259_09395	COG0316	Belongs to the HesB IscA family
BG259_09405	COG0628	permease
BG259_09420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_09420	COG2205	protein histidine kinase activity
BG259_09420	COG0784	Response regulator, receiver
BG259_09420	COG2198	Histidine kinase
BG259_09425	COG0747	negative chemotaxis
BG259_09435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG259_09440	COG0444	Belongs to the ABC transporter superfamily
BG259_09445	COG4608	Belongs to the ABC transporter superfamily
BG259_09455	COG2971	BadF BadG BcrA BcrD
BG259_09470	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BG259_09475	COG3842	ATPase activity
BG259_09485	COG1840	ABC-type Fe3 transport system, periplasmic component
BG259_09490	COG0004	ammonium transporteR
BG259_09505	COG1049	propionate catabolic process, 2-methylcitrate cycle
BG259_09510	COG1752	Esterase of the alpha-beta hydrolase superfamily
BG259_09515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BG259_09520	COG1643	Atp-dependent helicase
BG259_09530	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BG259_09535	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BG259_09545	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BG259_09560	COG1560	Kdo2-lipid A biosynthetic process
BG259_09565	COG0842	Transport permease protein
BG259_09570	COG1131	(ABC) transporter
BG259_09575	COG0659	secondary active sulfate transmembrane transporter activity
BG259_09580	COG0288	reversible hydration of carbon dioxide
BG259_09595	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BG259_09600	COG0508	dehydrogenase complex catalyzes the overall conversion of
BG259_09605	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BG259_09610	COG2186	Transcriptional regulator
BG259_09635	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BG259_09640	COG1459	type II secretion system
BG259_09650	COG0237	dephospho-CoA kinase activity
BG259_09655	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BG259_09660	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BG259_09685	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BG259_09690	COG4137	Cytochrome C assembly protein
BG259_09695	COG4536	flavin adenine dinucleotide binding
BG259_09715	COG0612	Peptidase, M16
BG259_09720	COG1238	metal cluster binding
BG259_09730	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BG259_09735	COG0511	ligase activity, forming carbon-carbon bonds
BG259_09735	COG5016	pyruvate
BG259_09800	COG0527	aspartate kinase activity
BG259_09815	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BG259_09820	COG1546	Belongs to the CinA family
BG259_09830	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BG259_09860	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BG259_09870	COG0148	phosphopyruvate hydratase activity
BG259_09880	COG3956	TIGRFAM MazG family protein
BG259_09885	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BG259_09910	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BG259_09915	COG1381	Involved in DNA repair and RecF pathway recombination
BG259_09920	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BG259_09930	COG0681	Belongs to the peptidase S26 family
BG259_09940	COG3086	response to oxidative stress
BG259_09955	COG1595	DNA-templated transcription, initiation
BG259_09960	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BG259_09970	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BG259_09990	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BG259_09995	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BG259_10005	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BG259_10015	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BG259_10025	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BG259_10035	COG0583	DNA-binding transcription factor activity
BG259_10050	COG0668	transmembrane transport
BG259_10055	COG0191	fructose-bisphosphate aldolase activity
BG259_10075	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BG259_10100	COG2356	endonuclease I
BG259_10105	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BG259_10110	COG0189	ligase activity
BG259_10115	COG1678	Uncharacterized ACR, COG1678
BG259_10120	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BG259_10135	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BG259_10140	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BG259_10145	COG0762	integral membrane protein
BG259_10160	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BG259_10165	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BG259_10265	COG1012	belongs to the aldehyde dehydrogenase family
BG259_10310	COG3437	response regulator, receiver
BG259_10325	COG1486	melibiose metabolic process
BG259_10330	COG1447	Phosphotransferase system cellobiose-specific component IIA
BG259_10340	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BG259_10360	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_10370	COG0795	lipopolysaccharide-transporting ATPase activity
BG259_10375	COG0795	lipopolysaccharide-transporting ATPase activity
BG259_10385	COG2927	DNA polymerase III (CHI subunit)
BG259_10390	COG0525	valine-tRNA ligase activity
BG259_10400	COG0456	acetyltransferase
BG259_10440	COG0251	oxidation-reduction process
BG259_10445	COG0204	Acyl-transferase
BG259_10455	COG5007	Belongs to the BolA IbaG family
BG259_10465	COG2854	intermembrane phospholipid transfer
BG259_10470	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BG259_10475	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BG259_10480	COG1127	ABC transporter
BG259_10490	COG0517	IMP dehydrogenase activity
BG259_10490	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BG259_10500	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BG259_10505	COG1137	ATPase activity
BG259_10515	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BG259_10520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_10530	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_10535	COG2239	Acts as a magnesium transporter
BG259_10540	COG0312	modulator of DNA gyrase
BG259_10550	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BG259_10555	COG0564	pseudouridine synthase activity
BG259_10570	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BG259_10575	COG0312	modulator of DNA gyrase
BG259_10580	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BG259_10585	COG3164	Protein of unknown function
BG259_10590	COG1530	ribonuclease E activity
BG259_10595	COG0424	maF-like protein
BG259_10600	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BG259_10605	COG1792	Involved in formation and maintenance of cell shape
BG259_10610	COG1077	Cell shape determining protein MreB Mrl
BG259_10655	COG1459	type II secretion system
BG259_10660	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BG259_10670	COG3409	Peptidoglycan-binding domain 1 protein
BG259_10670	COG3267	Type II secretory pathway component ExeA
BG259_10695	COG2200	EAL domain
BG259_10695	COG2199	diguanylate cyclase activity
BG259_10700	COG0629	single-stranded DNA binding
BG259_10715	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BG259_10725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BG259_10735	COG0527	aspartate kinase activity
BG259_10740	COG0646	methionine synthase
BG259_10740	COG1410	methionine synthase
BG259_10815	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BG259_10835	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BG259_10840	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BG259_10940	COG0735	belongs to the Fur family
BG259_10955	COG0432	Pfam Uncharacterised protein family UPF0047
BG259_10965	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BG259_10970	COG0305	Participates in initiation and elongation during chromosome replication
BG259_10995	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BG259_11000	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BG259_11045	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BG259_11055	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BG259_11055	COG0678	peroxiredoxin activity
BG259_11060	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BG259_11070	COG0165	Argininosuccinate lyase
BG259_11070	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BG259_11085	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BG259_11095	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BG259_11105	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BG259_11110	COG0460	homoserine dehydrogenase
BG259_11110	COG0527	aspartate kinase activity
BG259_11115	COG0626	cystathionine gamma-synthase activity
BG259_11125	COG0281	malic enzyme
BG259_11135	COG2906	2 iron, 2 sulfur cluster binding
BG259_11145	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BG259_11160	COG2168	tRNA wobble position uridine thiolation
BG259_11165	COG2923	Belongs to the DsrF TusC family
BG259_11170	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BG259_11175	COG2964	Protein conserved in bacteria
BG259_11180	COG0545	Peptidyl-prolyl cis-trans isomerase
BG259_11195	COG1446	asparaginase
BG259_11200	COG1047	Peptidyl-prolyl cis-trans
BG259_11215	COG2249	NAD(P)H dehydrogenase (quinone) activity
BG259_11220	COG0488	(ABC) transporter
BG259_11230	COG0429	hydrolase of the alpha beta-hydrolase fold
BG259_11240	COG3954	Phosphoribulokinase
BG259_11245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BG259_11265	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BG259_11295	COG0546	phosphoglycolate phosphatase activity
BG259_11300	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BG259_11305	COG0557	exoribonuclease II activity
BG259_11315	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BG259_11315	COG1017	nitric oxide dioxygenase activity
BG259_11320	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BG259_11325	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BG259_11330	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BG259_11335	COG0330	HflC and HflK could
BG259_11340	COG0330	HflC and HflK could
BG259_11345	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BG259_11360	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BG259_11370	COG0802	atpase or kinase
BG259_11375	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BG259_11445	COG1162	GTPase activity
BG259_11455	COG0471	metal ion transport
BG259_11460	COG0840	transmembrane signaling receptor activity
BG259_11470	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BG259_11475	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BG259_11480	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BG259_11490	COG1045	serine acetyltransferase
BG259_11495	COG4942	peptidase
BG259_11520	COG1053	succinate dehydrogenase
BG259_11525	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BG259_11555	COG1509	lysine 2,3-aminomutase activity
BG259_11580	COG0534	Mate efflux family protein
BG259_11590	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BG259_11595	COG3678	ATP-independent chaperone mediated protein folding
BG259_11600	COG0745	RESPONSE REGULATOR receiver
BG259_11605	COG2205	protein histidine kinase activity
BG259_11610	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BG259_11615	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BG259_11620	COG3030	protein affecting phage T7 exclusion by the F plasmid
BG259_11625	COG1027	Aspartate ammonia-lyase
BG259_11630	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BG259_11635	COG4232	protein-disulfide reductase activity
BG259_11645	COG2095	MarC family integral membrane protein
BG259_11655	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BG259_11675	COG2198	Histidine kinase
BG259_11675	COG0784	Response regulator, receiver
BG259_11675	COG2205	protein histidine kinase activity
BG259_11680	COG2814	Major facilitator Superfamily
BG259_11695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BG259_11700	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BG259_11705	COG0511	ligase activity, forming carbon-carbon bonds
BG259_11710	COG0439	Biotin carboxylase
BG259_11720	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BG259_11725	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BG259_11730	COG5001	Diguanylate cyclase
BG259_11730	COG3300	MHYT domain
BG259_11755	COG1982	Orn Lys Arg decarboxylase major
BG259_11760	COG0531	amino acid
BG259_11770	COG3710	Transcriptional regulator
BG259_11775	COG0789	Transcriptional regulator
BG259_11790	COG0151	Belongs to the GarS family
BG259_11805	COG1253	flavin adenine dinucleotide binding
BG259_11810	COG3068	Protein conserved in bacteria
BG259_11820	COG1573	uracil-dna glycosylase
BG259_11840	COG2816	NAD+ diphosphatase activity
BG259_11845	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BG259_11865	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BG259_11880	COG0250	Participates in transcription elongation, termination and antitermination
BG259_11885	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BG259_11925	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BG259_11935	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BG259_12075	COG0534	Mate efflux family protein
BG259_12095	COG2937	Belongs to the GPAT DAPAT family
BG259_12105	COG3161	chorismate lyase activity
BG259_12110	COG1580	Controls the rotational direction of flagella during chemotaxis
BG259_12115	COG0705	Rhomboid family
BG259_12130	COG2177	Part of the ABC transporter FtsEX involved in
BG259_12135	COG2884	Cell division ATP-binding protein ftsE
BG259_12140	COG0552	protein localization to endoplasmic reticulum
BG259_12145	COG0742	ribosomal rna small subunit methyltransferase
BG259_12155	COG2095	MarC family integral membrane protein
BG259_12200	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BG259_12205	COG0640	Transcriptional regulator
BG259_12210	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BG259_12215	COG1280	lysine exporter protein (LysE YggA)
BG259_12220	COG2267	carboxylic ester hydrolase activity
BG259_12225	COG0561	phosphatase activity
BG259_12245	COG2199	diguanylate cyclase activity
BG259_12245	COG3287	FIST C domain
BG259_12245	COG2200	EAL domain
BG259_12250	COG1011	Hydrolase
BG259_12270	COG0019	diaminopimelate decarboxylase activity
BG259_12285	COG3072	Adenylate cyclase
BG259_12295	COG1587	Uroporphyrinogen-III synthase
BG259_12300	COG2959	enzyme of heme biosynthesis
BG259_12305	COG3071	HemY protein
BG259_12345	COG0633	Ferredoxin
BG259_12350	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BG259_12360	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BG259_12365	COG3118	belongs to the thioredoxin family
BG259_12380	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BG259_12390	COG0514	ATP-dependent DNA helicase (RecQ)
BG259_12395	COG2962	Rard protein
BG259_12405	COG1280	lysine exporter protein (LysE YggA)
BG259_12410	COG0405	Gamma-glutamyltransferase
BG259_12420	COG0210	DNA helicase
BG259_12430	COG3220	belongs to the UPF0276 family
BG259_12450	COG2814	Major facilitator Superfamily
BG259_12460	COG0006	proline dipeptidase activity
BG259_12460	COG0006	proline dipeptidase activity
BG259_12475	COG2104	thiamine diphosphate biosynthetic process
BG259_12480	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BG259_12500	COG2132	Multicopper oxidase
BG259_12550	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BG259_12555	COG1739	Uncharacterized protein family UPF0029
BG259_12565	COG0183	Belongs to the thiolase family
BG259_12570	COG0604	alcohol dehydrogenase
BG259_12585	COG0425	Belongs to the sulfur carrier protein TusA family
BG259_12595	COG2119	membrane
BG259_12610	COG0366	Alpha amylase catalytic
BG259_12615	COG3977	Valine--pyruvate aminotransferase
BG259_12620	COG0071	Belongs to the small heat shock protein (HSP20) family
BG259_12625	COG0187	DNA topoisomerase II activity
BG259_12635	COG0592	DNA-directed DNA polymerase activity
BG259_12655	COG1126	abc transporter atp-binding protein
BG259_12670	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BG259_12720	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
BG259_12730	COG3645	SOS response
BG259_12770	COG1395	domain, Protein
BG259_12785	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BG259_12790	COG0445	tRNA wobble uridine modification
BG259_12800	COG1192	Involved in chromosome partitioning
BG259_12805	COG1475	DNA binding
BG259_12810	COG3312	ion transport
BG259_12815	COG0356	it plays a direct role in the translocation of protons across the membrane
BG259_12840	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BG259_12850	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BG259_12860	COG0765	amino acid transport
BG259_12870	COG2814	Major facilitator Superfamily
BG259_12875	COG0583	DNA-binding transcription factor activity
BG259_12885	COG0129	dihydroxy-acid dehydratase activity
BG259_12890	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BG259_12895	COG3978	acetolactate synthase activity
BG259_12905	COG0606	chelatase, subunit chli
BG259_12910	COG3706	GGDEF domain
BG259_12920	COG0204	Acyl-transferase
BG259_12925	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BG259_12930	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BG259_12935	COG4974	Belongs to the 'phage' integrase family
BG259_13040	COG3084	Protein conserved in bacteria
BG259_13045	COG4326	sporulation control protein
BG259_13050	COG1272	protein, Hemolysin III
BG259_13060	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BG259_13065	COG0569	domain protein
BG259_13070	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BG259_13070	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BG259_13080	COG0242	peptide deformylase activity
BG259_13090	COG0758	DNA mediated transformation
BG259_13100	COG0551	DNA topoisomerase type I activity
BG259_13105	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BG259_13110	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BG259_13125	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BG259_13135	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BG259_13175	COG0583	DNA-binding transcription factor activity
BG259_13180	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BG259_13185	COG2960	long-chain fatty acid transporting porin activity
BG259_13190	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_13195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_13200	COG1309	transcriptional regulator
BG259_13250	COG4172	Belongs to the ABC transporter superfamily
BG259_13255	COG0747	negative chemotaxis
BG259_13265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG259_13300	COG1609	Transcriptional regulator
BG259_13305	COG0583	DNA-binding transcription factor activity
BG259_13310	COG2076	Multidrug Resistance protein
BG259_13320	COG0129	dihydroxy-acid dehydratase activity
BG259_13325	COG3265	gluconokinase activity
BG259_13330	COG2610	gluconate transmembrane transporter activity
BG259_13335	COG0800	Aldolase
BG259_13340	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BG259_13355	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BG259_13370	COG1522	sequence-specific DNA binding
BG259_13375	COG5002	protein histidine kinase activity
BG259_13375	COG5001	Diguanylate cyclase
BG259_13390	COG0697	spore germination
BG259_13395	COG0589	response to stress
BG259_13405	COG1528	Iron-storage protein
BG259_13415	COG2081	HI0933 family
BG259_13435	COG1322	Protein conserved in bacteria
BG259_13445	COG3165	ubiquinone biosynthetic process from chorismate
BG259_13465	COG0805	protein transport
BG259_13470	COG0084	hydrolase, TatD family'
BG259_13490	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BG259_13490	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BG259_13495	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BG259_13520	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BG259_13525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BG259_13535	COG2204	response regulator
BG259_13540	COG3852	Histidine kinase
BG259_13550	COG0174	glutamine synthetase
BG259_13580	COG1490	D-aminoacyl-tRNA deacylase activity
BG259_13585	COG0456	acetyltransferase
BG259_13605	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BG259_13610	COG3031	protein transport across the cell outer membrane
BG259_13620	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BG259_13625	COG1459	type II secretion system
BG259_13630	COG2165	general secretion pathway protein
BG259_13635	COG2165	general secretion pathway protein
BG259_13640	COG2165	general secretion pathway protein
BG259_13645	COG4795	General secretion pathway protein
BG259_13650	COG3156	type II secretion system protein K
BG259_13655	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BG259_13660	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BG259_13670	COG1218	3'(2'),5'-bisphosphate nucleotidase
BG259_13675	COG0494	nUDIX hydrolase
BG259_13685	COG1040	competence protein
BG259_13700	COG2183	response to ionizing radiation
BG259_13710	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BG259_13715	COG0745	RESPONSE REGULATOR receiver
BG259_13720	COG2205	protein histidine kinase activity
BG259_13725	COG2233	PERMEase
BG259_13735	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BG259_13740	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BG259_13745	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BG259_13750	COG1758	RNA polymerase activity
BG259_13755	COG0194	GDP metabolic process
BG259_13770	COG0848	biopolymer transport protein
BG259_13775	COG0811	peptide transport
BG259_13795	COG4174	ABC transporter (Permease)
BG259_13800	COG4239	(ABC) transporter, permease
BG259_13805	COG0747	negative chemotaxis
BG259_13810	COG0444	Belongs to the ABC transporter superfamily
BG259_13815	COG4608	Belongs to the ABC transporter superfamily
BG259_13840	COG0745	RESPONSE REGULATOR receiver
BG259_13845	COG1561	YicC-like family, N-terminal region
BG259_13850	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BG259_13860	COG1560	Kdo2-lipid A biosynthetic process
BG259_13870	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BG259_13875	COG0840	transmembrane signaling receptor activity
BG259_13895	COG2194	sulfuric ester hydrolase activity
BG259_13910	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BG259_13925	COG0463	Glycosyl transferase, family 2
BG259_13930	COG0859	PFAM glycosyl transferase family 9
BG259_13935	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BG259_13940	COG3642	lipopolysaccharide core region biosynthetic process
BG259_13960	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BG259_13970	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_13985	COG1021	2,3-dihydroxybenzoate-AMP ligase
BG259_13990	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BG259_14000	COG1086	Polysaccharide biosynthesis protein
BG259_14005	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BG259_14010	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BG259_14015	COG2089	acid synthase
BG259_14025	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG259_14040	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BG259_14050	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_14065	COG1519	Transferase
BG259_14070	COG0859	PFAM glycosyl transferase family 9
BG259_14075	COG1560	Kdo2-lipid A biosynthetic process
BG259_14085	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BG259_14150	COG1216	Glycosyl transferase, family 2
BG259_14160	COG0438	transferase activity, transferring glycosyl groups
BG259_14160	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BG259_14165	COG0438	transferase activity, transferring glycosyl groups
BG259_14170	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BG259_14175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BG259_14195	COG1482	cell wall glycoprotein biosynthetic process
BG259_14210	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BG259_14225	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BG259_14230	COG0149	triose-phosphate isomerase activity
BG259_14260	COG1494	fructose-1,6-bisphosphatase
BG259_14275	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BG259_14280	COG1575	Belongs to the MenA family. Type 1 subfamily
BG259_14300	COG1609	Transcriptional regulator
BG259_14305	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BG259_14310	COG0254	rRNA binding
BG259_14325	COG0088	Forms part of the polypeptide exit tunnel
BG259_14345	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BG259_14395	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BG259_14410	COG1841	ribosomal large subunit assembly
BG259_14415	COG0200	Binds to the 23S rRNA
BG259_14420	COG0201	protein transport
BG259_14430	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BG259_14435	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BG259_14445	COG0202	RNA polymerase activity
BG259_14450	COG0203	ribosomal protein L17
BG259_14460	COG0545	Peptidyl-prolyl cis-trans isomerase
BG259_14475	COG2153	protein acetylation
BG259_14480	COG0513	Belongs to the DEAD box helicase family
BG259_14490	COG0737	Belongs to the 5'-nucleotidase family
BG259_14495	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BG259_14495	COG1648	precorrin-2 dehydrogenase activity
BG259_14510	COG3273	potassium ion transport
BG259_14510	COG0471	metal ion transport
BG259_14515	COG0529	Catalyzes the synthesis of activated sulfate
BG259_14535	COG1136	(ABC) transporter
BG259_14550	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BG259_14560	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_14565	COG0729	surface antigen
BG259_14575	COG2105	PFAM AIG2 family protein
BG259_14585	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BG259_14595	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BG259_14600	COG0163	prenyltransferase activity
BG259_14605	COG4143	(ABC) transporter
BG259_14610	COG1178	ABC-type Fe3 transport system permease component
BG259_14615	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BG259_14650	COG0142	geranyltranstransferase activity
BG259_14655	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BG259_14665	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BG259_14670	COG2966	Psort location CytoplasmicMembrane, score
BG259_14675	COG3610	response to peptide
BG259_14695	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BG259_14700	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BG259_14705	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BG259_14710	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BG259_14715	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BG259_14735	COG0473	3-isopropylmalate dehydrogenase activity
BG259_14740	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BG259_14755	COG0671	phosphoesterase, PA-phosphatase related
BG259_14765	COG0583	DNA-binding transcription factor activity
BG259_14770	COG1022	Amp-dependent synthetase and ligase
BG259_14775	COG0028	Belongs to the TPP enzyme family
BG259_14780	COG0440	acetolactate synthase activity
BG259_14795	COG0469	pyruvate kinase activity
BG259_14800	COG1349	DNA-binding transcription factor activity
BG259_14805	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BG259_14825	COG5002	protein histidine kinase activity
BG259_14830	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BG259_14835	COG3722	fumarate hydratase activity
BG259_14845	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_14845	COG2213	PTS system mannitol-specific
BG259_14875	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BG259_14880	COG0358	DNA primase activity
BG259_14885	COG1610	YqeY-like protein
BG259_14890	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BG259_14895	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BG259_14900	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BG259_14910	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BG259_14915	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BG259_14930	COG3409	Peptidoglycan-binding domain 1 protein
BG259_14930	COG3267	Type II secretory pathway component ExeA
BG259_14940	COG4991	sh3 domain protein
BG259_14945	COG0306	phosphate transporter
BG259_14950	COG1392	Phosphate transport regulator
BG259_14955	COG3025	triphosphatase activity
BG259_14960	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BG259_14970	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BG259_14980	COG1538	Outer membrane efflux protein
BG259_14985	COG0494	nUDIX hydrolase
BG259_14990	COG3151	Protein conserved in bacteria
BG259_15000	COG3150	esterase
BG259_15005	COG0187	DNA topoisomerase II activity
BG259_15010	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BG259_15015	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BG259_15030	COG3105	Protein conserved in bacteria
BG259_15035	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BG259_15050	COG0723	plastoquinol--plastocyanin reductase activity
BG259_15055	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BG259_15060	COG2857	Cytochrome c1
BG259_15065	COG0625	glutathione transferase activity
BG259_15070	COG2969	positive regulation of protein catabolic process
BG259_15075	COG2823	Periplasmic or secreted lipoprotein
BG259_15080	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BG259_15095	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BG259_15110	COG3116	cell division
BG259_15115	COG0768	penicillin binding
BG259_15120	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BG259_15125	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BG259_15140	COG0772	Belongs to the SEDS family
BG259_15155	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BG259_15160	COG0849	cell division
BG259_15165	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BG259_15180	COG0494	nUDIX hydrolase
BG259_15190	COG0505	Belongs to the CarA family
BG259_15195	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BG259_15215	COG0730	response to heat
BG259_15220	COG0583	DNA-binding transcription factor activity
BG259_15225	COG2860	membrane
BG259_15250	COG0493	'glutamate synthase
BG259_15255	COG0069	glutamate synthase activity
BG259_15255	COG0070	glutamate synthase
BG259_15255	COG0067	glutamate synthase
BG259_15265	COG0067	glutamate synthase
BG259_15265	COG0069	glutamate synthase activity
BG259_15265	COG0070	glutamate synthase
BG259_15270	COG1242	4 iron, 4 sulfur cluster binding
BG259_15275	COG2203	Gaf domain
BG259_15275	COG3706	GGDEF domain
BG259_15275	COG4251	negative regulation of phosphorylation
BG259_15275	COG5001	Diguanylate cyclase
BG259_15285	COG0784	Response regulator, receiver
BG259_15285	COG5002	protein histidine kinase activity
BG259_15285	COG2198	Histidine kinase
BG259_15295	COG0745	RESPONSE REGULATOR receiver
BG259_15305	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BG259_15320	COG0083	homoserine kinase activity
BG259_15325	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BG259_15330	COG0431	NADPH-dependent FMN reductase
BG259_15360	COG1115	amino acid carrier protein
BG259_15365	COG3022	response to hydroperoxide
BG259_15375	COG0513	Belongs to the DEAD box helicase family
BG259_15390	COG0716	FMN binding
BG259_15400	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BG259_15405	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BG259_15430	COG0667	Aldo Keto reductase
BG259_15450	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
BG259_15455	COG0730	response to heat
BG259_15470	COG1283	sodium-dependent phosphate transmembrane transporter activity
BG259_15475	COG0583	DNA-binding transcription factor activity
BG259_15480	COG0640	Transcriptional regulator
BG259_15485	COG0268	Binds directly to 16S ribosomal RNA
BG259_15490	COG0728	peptidoglycan biosynthetic process
BG259_15495	COG0196	riboflavin kinase activity
BG259_15510	COG1047	Peptidyl-prolyl cis-trans
BG259_15515	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BG259_15520	COG3279	Response regulator of the LytR AlgR family
BG259_15525	COG3275	phosphorelay sensor kinase activity
BG259_15530	COG1966	Carbon starvation protein
BG259_15550	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BG259_15555	COG1472	Belongs to the glycosyl hydrolase 3 family
BG259_15560	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BG259_15565	COG1605	Chorismate mutase
BG259_15565	COG0287	Prephenate dehydrogenase
BG259_15570	COG0739	heme binding
BG259_15580	COG0488	(ABC) transporter
BG259_15595	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BG259_15600	COG1605	Chorismate mutase
BG259_15600	COG0077	Prephenate dehydratase
BG259_15605	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BG259_15610	COG0741	lytic transglycosylase activity
BG259_15615	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BG259_15620	COG0564	pseudouridine synthase activity
BG259_15630	COG0542	response to heat
BG259_15690	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BG259_15705	COG0745	RESPONSE REGULATOR receiver
BG259_15710	COG5002	protein histidine kinase activity
BG259_15720	COG0248	Ppx GppA phosphatase
BG259_15725	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BG259_15730	COG0573	inorganic phosphate transmembrane transporter activity
BG259_15735	COG0581	inorganic phosphate transmembrane transporter activity
BG259_15740	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BG259_15745	COG0704	Plays a role in the regulation of phosphate uptake
BG259_15775	COG0450	alkyl hydroperoxide reductase
BG259_15780	COG0583	DNA-binding transcription factor activity
BG259_15785	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BG259_15795	COG0517	IMP dehydrogenase activity
BG259_15820	COG1862	Preprotein translocase
BG259_15825	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG259_15830	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG259_15845	COG0483	inositol monophosphate 1-phosphatase activity
BG259_15850	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BG259_15865	COG0822	iron-sulfur transferase activity
BG259_15870	COG0316	Belongs to the HesB IscA family
BG259_15885	COG0633	Ferredoxin
BG259_15890	COG2975	iron-sulfur cluster assembly
BG259_15925	COG2976	Protein conserved in bacteria
BG259_15930	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BG259_15945	COG2199	diguanylate cyclase activity
BG259_15945	COG2203	Gaf domain
BG259_15960	COG0516	GMP reductase activity
BG259_15960	COG0517	IMP dehydrogenase activity
BG259_15970	COG1757	Na H antiporter
BG259_15980	COG1584	GPR1 FUN34 yaaH family protein
BG259_15985	COG1115	amino acid carrier protein
BG259_15995	COG0583	DNA-binding transcription factor activity
BG259_16000	COG0668	transmembrane transport
BG259_16005	COG2873	o-acetylhomoserine
BG259_16010	COG0316	Belongs to the HesB IscA family
BG259_16015	COG0719	Fe-S assembly protein
BG259_16020	COG0396	ATPase activity
BG259_16025	COG0719	Fe-S assembly protein
BG259_16045	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BG259_16065	COG1289	transmembrane transporter activity
BG259_16070	COG0583	DNA-binding transcription factor activity
BG259_16095	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BG259_16115	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BG259_16135	COG2867	negative regulation of translational initiation
BG259_16140	COG2914	Belongs to the UPF0125 (RnfH) family
BG259_16145	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BG259_16150	COG0497	DNA recombination
BG259_16170	COG1301	dicarboxylic acid transport
BG259_16215	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BG259_16220	COG0590	tRNA wobble adenosine to inosine editing
BG259_16230	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BG259_16230	COG0047	phosphoribosylformylglycinamidine synthase activity
BG259_16260	COG2195	Cleaves the N-terminal amino acid of tripeptides
BG259_16265	COG2252	PERMEase
BG259_16270	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BG259_16290	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BG259_16295	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BG259_16300	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BG259_16300	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BG259_16325	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BG259_16330	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BG259_16340	COG0142	geranyltranstransferase activity
BG259_16350	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BG259_16365	COG0583	DNA-binding transcription factor activity
BG259_16375	COG2363	Small membrane protein
BG259_16395	COG1611	Belongs to the LOG family
BG259_16400	COG3706	GGDEF domain
BG259_16420	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
BG259_16425	COG0737	Belongs to the 5'-nucleotidase family
BG259_16435	COG1464	Belongs to the NlpA lipoprotein family
BG259_16440	COG2011	ABC-type metal ion transport system permease component
BG259_16445	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BG259_16450	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BG259_16460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_16460	COG1263	PTS System
BG259_16465	COG0366	Alpha amylase catalytic
BG259_16480	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BG259_16485	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BG259_16505	COG1686	Belongs to the peptidase S11 family
BG259_16510	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BG259_16515	COG0772	Belongs to the SEDS family
BG259_16520	COG0768	penicillin binding
BG259_16530	COG0799	negative regulation of ribosome biogenesis
BG259_16535	COG1466	dna polymerase III delta subunit
BG259_16540	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
BG259_16550	COG2888	peptidyl-tyrosine sulfation
BG259_16555	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BG259_16560	COG4535	Mg2 and Co2 transporter CorC
BG259_16570	COG1702	phosphate starvation-inducible protein PhoH
BG259_16580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BG259_16705	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BG259_16730	COG2890	protein-(glutamine-N5) methyltransferase activity
BG259_16735	COG3094	Invasion gene expression up-regulator, SirB
BG259_16740	COG2912	Transglutaminase-like superfamily
BG259_16745	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BG259_16750	COG0737	Belongs to the 5'-nucleotidase family
BG259_16755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BG259_16760	COG1187	pseudouridine synthase activity
BG259_16765	COG2840	Smr protein MutS2
BG259_16810	COG2217	Heavy metal translocating P-type atpase
BG259_16810	COG2608	mercury ion transmembrane transporter activity
BG259_16820	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BG259_16880	COG0784	Response regulator, receiver
BG259_16880	COG0835	chemotaxis
BG259_16885	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BG259_16890	COG1815	bacterial-type flagellum-dependent cell motility
BG259_16895	COG1558	bacterial-type flagellum-dependent cell motility
BG259_16900	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BG259_16905	COG1749	Flagellar hook protein flgE
BG259_16910	COG4787	bacterial-type flagellum-dependent cell motility
BG259_16915	COG4786	Flagellar basal body rod
BG259_16920	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BG259_16925	COG1706	bacterial-type flagellum-dependent cell motility
BG259_16930	COG1705	Flagellar rod assembly protein muramidase FlgJ
BG259_16930	COG3951	Flagellar rod assembly protein muramidase FlgJ
BG259_16945	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_16950	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_16955	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_16960	COG2190	(PTS) system
BG259_16965	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BG259_16970	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_16980	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BG259_16985	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
BG259_17015	COG0330	HflC and HflK could
BG259_17020	COG3118	belongs to the thioredoxin family
BG259_17030	COG0300	oxidoreductase activity
BG259_17035	COG1090	epimerase
BG259_17065	COG0622	Phosphoesterase
BG259_17085	COG3710	Transcriptional regulator
BG259_17090	COG0326	Molecular chaperone. Has ATPase activity
BG259_17100	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BG259_17105	COG3104	oligopeptide transport
BG259_17115	COG0367	asparagine synthase
BG259_17120	COG4651	solute:proton antiporter activity
BG259_17120	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BG259_17125	COG1846	Transcriptional regulator
BG259_17125	COG1940	carbohydrate kinase activity
BG259_17130	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BG259_17135	COG2190	(PTS) system
BG259_17135	COG1263	PTS System
BG259_17135	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_17215	COG1070	Carbohydrate kinase
BG259_17220	COG4154	Belongs to the RbsD FucU family
BG259_17225	COG0235	Class ii aldolase
BG259_17230	COG1454	alcohol dehydrogenase
BG259_17235	COG4667	esterase of the alpha-beta hydrolase superfamily
BG259_17245	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BG259_17250	COG0415	Belongs to the DNA photolyase family
BG259_17265	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BG259_17270	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BG259_17290	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BG259_17305	COG1686	Belongs to the peptidase S11 family
BG259_17330	COG0583	DNA-binding transcription factor activity
BG259_17335	COG4628	conserved protein (DUF2132)
BG259_17345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BG259_17360	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BG259_17365	COG0628	permease
BG259_17405	COG2988	succinylglutamate desuccinylase activity
BG259_17410	COG0583	DNA-binding transcription factor activity
BG259_17435	COG2814	Major facilitator Superfamily
BG259_17445	COG0148	phosphopyruvate hydratase activity
BG259_17450	COG0454	-acetyltransferase
BG259_17460	COG0745	RESPONSE REGULATOR receiver
BG259_17465	COG2205	protein histidine kinase activity
BG259_17480	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BG259_17485	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BG259_17500	COG2207	Transcriptional regulator
BG259_17545	COG1294	oxidase, subunit
BG259_17550	COG1271	oxidase subunit
BG259_17565	COG3220	belongs to the UPF0276 family
BG259_17580	COG0384	phenazine biosynthesis protein PhzF
BG259_17585	COG0346	lactoylglutathione lyase activity
BG259_17600	COG0488	(ABC) transporter
BG259_17605	COG4628	conserved protein (DUF2132)
BG259_17610	COG0583	DNA-binding transcription factor activity
BG259_17615	COG0431	NADPH-dependent FMN reductase
BG259_17620	COG0435	Glutathione S-transferase
BG259_17640	COG0583	DNA-binding transcription factor activity
BG259_17645	COG3226	Transcriptional regulator
BG259_17660	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BG259_17665	COG1280	lysine exporter protein (LysE YggA)
BG259_17680	COG3537	Alpha-1,2-mannosidase
BG259_17685	COG3537	Alpha-1,2-mannosidase
BG259_17695	COG3537	Alpha-1,2-mannosidase
BG259_17700	COG3537	Alpha-1,2-mannosidase
BG259_17705	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_17715	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_17715	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_17720	COG0346	lactoylglutathione lyase activity
BG259_17725	COG1349	DNA-binding transcription factor activity
BG259_17730	COG1609	Transcriptional regulator
BG259_17735	COG1263	PTS System
BG259_17735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_17740	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BG259_17745	COG1482	cell wall glycoprotein biosynthetic process
BG259_17765	COG0753	catalase activity
BG259_17780	COG1335	isochorismatase
BG259_17830	COG0583	DNA-binding transcription factor activity
BG259_17855	COG4175	Glycine betaine
BG259_17855	COG3448	diguanylate cyclase activity
BG259_17860	COG4176	ABC-type proline glycine betaine transport system permease component
BG259_17870	COG1342	Belongs to the UPF0251 family
BG259_17890	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BG259_17900	COG4948	Mandelate Racemase Muconate Lactonizing
BG259_17915	COG0668	transmembrane transport
BG259_17925	COG1304	FMN binding
BG259_17935	COG1620	l-lactate permease
BG259_17940	COG0583	DNA-binding transcription factor activity
BG259_17945	COG1505	serine-type exopeptidase activity
BG259_17950	COG4172	Belongs to the ABC transporter superfamily
BG259_17960	COG1067	ATP-dependent peptidase activity
BG259_17990	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG259_17995	COG0437	4 iron, 4 sulfur cluster binding
BG259_18000	COG0348	domain, Protein
BG259_18020	COG1122	ATPase activity
BG259_18030	COG1566	PFAM secretion protein HlyD family protein
BG259_18045	COG3706	GGDEF domain
BG259_18060	COG0813	purine-nucleoside phosphorylase activity
BG259_18065	COG3272	Protein of unknown function (DUF1722)
BG259_18070	COG0789	Transcriptional regulator
BG259_18075	COG0415	Belongs to the DNA photolyase family
BG259_18080	COG1376	ErfK ybiS ycfS ynhG family protein
BG259_18080	COG1388	LysM domain
BG259_18090	COG0513	Belongs to the DEAD box helicase family
BG259_18100	COG0840	transmembrane signaling receptor activity
BG259_18105	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BG259_18110	COG0573	inorganic phosphate transmembrane transporter activity
BG259_18115	COG0581	inorganic phosphate transmembrane transporter activity
BG259_18120	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BG259_18135	COG2304	oxidoreductase activity
BG259_18155	COG0714	Associated with various cellular activities
BG259_18160	COG0840	transmembrane signaling receptor activity
BG259_18195	COG0110	maltose O-acetyltransferase activity
BG259_18205	COG4191	Histidine kinase
BG259_18215	COG0573	inorganic phosphate transmembrane transporter activity
BG259_18225	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BG259_18230	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_18255	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BG259_18260	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BG259_18270	COG1252	NADH dehydrogenase
BG259_18275	COG1301	dicarboxylic acid transport
BG259_18285	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_18300	COG3746	phosphate-selective porin O and P
BG259_18325	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_18350	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BG259_18360	COG0625	glutathione transferase activity
BG259_18365	COG0583	DNA-binding transcription factor activity
BG259_18370	COG2249	NAD(P)H dehydrogenase (quinone) activity
BG259_18375	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_18385	COG1686	Belongs to the peptidase S11 family
BG259_18390	COG3706	GGDEF domain
BG259_18400	COG2226	methyltransferase
BG259_18430	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BG259_18445	COG1278	Cold shock
BG259_18450	COG1741	Belongs to the pirin family
BG259_18460	COG4667	esterase of the alpha-beta hydrolase superfamily
BG259_18470	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BG259_18480	COG0523	cobalamin synthesis protein
BG259_18495	COG1846	Transcriptional regulator
BG259_18510	COG3842	ATPase activity
BG259_18515	COG0395	ABC-type sugar transport system, permease component
BG259_18520	COG1175	transmembrane transport
BG259_18545	COG0589	response to stress
BG259_18565	COG1720	tRNA m6t6A37 methyltransferase activity
BG259_18570	COG0488	(ABC) transporter
BG259_18575	COG1505	serine-type exopeptidase activity
BG259_18585	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG259_18590	COG1858	cytochrome C peroxidase
BG259_18615	COG0848	biopolymer transport protein
BG259_18620	COG0811	peptide transport
BG259_18625	COG0811	peptide transport
BG259_18635	COG4771	TonB-dependent receptor
BG259_18640	COG4178	(ABC) transporter
BG259_18645	COG0612	Peptidase, M16
BG259_18665	COG0456	acetyltransferase
BG259_18705	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_18725	COG3383	formate dehydrogenase (NAD+) activity
BG259_18750	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BG259_18760	COG4145	pantothenate transmembrane transporter activity
BG259_18765	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_18770	COG0800	Aldolase
BG259_18780	COG2706	6-phosphogluconolactonase activity
BG259_18785	COG0251	oxidation-reduction process
BG259_18790	COG0842	Transport permease protein
BG259_18795	COG1131	(ABC) transporter
BG259_18805	COG0840	transmembrane signaling receptor activity
BG259_18810	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BG259_18815	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_18825	COG0848	biopolymer transport protein
BG259_18830	COG0811	peptide transport
BG259_18835	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BG259_18845	COG3721	Heme iron utilization protein
BG259_18850	COG0748	coenzyme F420 binding
BG259_18860	COG0784	Response regulator, receiver
BG259_18860	COG0835	chemotaxis
BG259_18865	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BG259_18880	COG0366	Alpha amylase catalytic
BG259_18935	COG0583	DNA-binding transcription factor activity
BG259_18950	COG2249	NAD(P)H dehydrogenase (quinone) activity
BG259_18960	COG1881	PFAM PEBP family protein
BG259_18975	COG0798	PFAM Bile acid sodium symporter
BG259_18990	COG1733	regulation of RNA biosynthetic process
BG259_19000	COG0747	negative chemotaxis
BG259_19005	COG1482	cell wall glycoprotein biosynthetic process
BG259_19010	COG0383	alpha-mannosidase activity
BG259_19015	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_19015	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_19015	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_19020	COG2188	Transcriptional regulator
BG259_19025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_19030	COG2213	PTS system mannitol-specific
BG259_19035	COG1063	alcohol dehydrogenase
BG259_19045	COG1072	(Pantothenic acid kinase))
BG259_19050	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BG259_19070	COG0814	amino acid
BG259_19105	COG0739	heme binding
BG259_19110	COG5001	Diguanylate cyclase
BG259_19115	COG0583	DNA-binding transcription factor activity
BG259_19120	COG2814	Major facilitator Superfamily
BG259_19135	COG0697	spore germination
BG259_19150	COG0179	Fumarylacetoacetate (FAA) hydrolase
BG259_19170	COG1280	lysine exporter protein (LysE YggA)
BG259_19180	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BG259_19195	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BG259_19200	COG1845	cytochrome c oxidase, subunit III
BG259_19220	COG1612	heme a metabolic process
BG259_19235	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BG259_19240	COG2814	Major facilitator Superfamily
BG259_19250	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BG259_19280	COG2897	thiosulfate sulfurtransferase activity
BG259_19300	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BG259_19320	COG1914	H( )-stimulated, divalent metal cation uptake system
BG259_19345	COG4989	oxidoreductase activity
BG259_19360	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BG259_19360	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BG259_19375	COG1073	alpha beta
BG259_19380	COG0583	DNA-binding transcription factor activity
BG259_19400	COG4964	Belongs to the GSP D family
BG259_19410	COG0455	bacterial-type flagellum organization
BG259_19450	COG2885	chlorophyll binding
BG259_19480	COG0204	Acyl-transferase
BG259_19505	COG3706	GGDEF domain
BG259_19535	COG4176	ABC-type proline glycine betaine transport system permease component
BG259_19540	COG0517	IMP dehydrogenase activity
BG259_19540	COG4175	Glycine betaine
BG259_19555	COG0330	HflC and HflK could
BG259_19590	COG0784	Response regulator, receiver
BG259_19590	COG2205	protein histidine kinase activity
BG259_19635	COG0586	Pfam SNARE associated Golgi protein
BG259_19660	COG1794	racemase activity, acting on amino acids and derivatives
BG259_19665	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BG259_19670	COG5001	Diguanylate cyclase
BG259_19680	COG1129	ABC transporter
BG259_19685	COG1172	Belongs to the binding-protein-dependent transport system permease family
BG259_19690	COG1879	ABC-type sugar transport system periplasmic component
BG259_19695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_19700	COG1609	Transcriptional regulator
BG259_19715	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
BG259_19730	COG4607	ABC-type enterochelin transport system periplasmic component
BG259_19735	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_19740	COG4605	iron ion homeostasis
BG259_19745	COG4604	ABC transporter, ATP-binding protein
BG259_19750	COG0789	Transcriptional regulator
BG259_19760	COG4206	TonB-dependent receptor
BG259_19785	COG0523	cobalamin synthesis protein
BG259_19790	COG3447	MASE1 domain protein
BG259_19790	COG5002	protein histidine kinase activity
BG259_19790	COG5001	Diguanylate cyclase
BG259_19795	COG0513	Belongs to the DEAD box helicase family
BG259_19815	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BG259_19820	COG1119	ATPase activity
BG259_19830	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BG259_19835	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BG259_19840	COG0745	RESPONSE REGULATOR receiver
BG259_19845	COG2205	protein histidine kinase activity
BG259_19860	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BG259_19875	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
BG259_19880	COG0513	Belongs to the DEAD box helicase family
BG259_19890	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BG259_19895	COG0583	DNA-binding transcription factor activity
BG259_19905	COG1012	belongs to the aldehyde dehydrogenase family
BG259_19915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_19950	COG1126	abc transporter atp-binding protein
BG259_19955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_19960	COG4215	(ABC) transporter
BG259_19965	COG4160	amino acid transport
BG259_19995	COG0745	RESPONSE REGULATOR receiver
BG259_20000	COG5002	protein histidine kinase activity
BG259_20005	COG0431	NADPH-dependent FMN reductase
BG259_20005	COG1053	succinate dehydrogenase
BG259_20005	COG3976	FMN-binding domain protein
BG259_20055	COG0443	Heat shock 70 kDa protein
BG259_20060	COG2847	Copper chaperone PCu(A)C
BG259_20090	COG0745	RESPONSE REGULATOR receiver
BG259_20105	COG1785	Belongs to the alkaline phosphatase family
BG259_20125	COG3706	GGDEF domain
BG259_20130	COG0814	amino acid
BG259_20135	COG5002	protein histidine kinase activity
BG259_20135	COG5001	Diguanylate cyclase
BG259_20140	COG0456	acetyltransferase
BG259_20145	COG0243	molybdopterin cofactor binding
BG259_20155	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BG259_20165	COG3707	response regulator
BG259_20175	COG1116	anion transmembrane transporter activity
BG259_20175	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BG259_20180	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BG259_20185	COG1116	anion transmembrane transporter activity
BG259_20190	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BG259_20190	COG2146	nitrite reductase [NAD(P)H] activity
BG259_20240	COG0739	heme binding
BG259_20250	COG3038	cytochrome b561
BG259_20275	COG0628	permease
BG259_20280	COG1024	Enoyl-CoA hydratase
BG259_20285	COG3706	GGDEF domain
BG259_20285	COG0745	RESPONSE REGULATOR receiver
BG259_20365	COG2067	long-chain fatty acid transport protein
BG259_20370	COG1234	tRNA 3'-trailer cleavage
BG259_20380	COG0069	glutamate synthase activity
BG259_20380	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BG259_20400	COG2755	lipolytic protein G-D-S-L family
BG259_20400	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BG259_20410	COG1902	pentaerythritol trinitrate reductase activity
BG259_20415	COG0346	lactoylglutathione lyase activity
BG259_20440	COG2815	serine threonine protein kinase
BG259_20440	COG0515	serine threonine protein kinase
BG259_20475	COG0631	protein serine/threonine phosphatase activity
BG259_20530	COG3501	Rhs element vgr protein
BG259_20545	COG3209	COG3209 Rhs family protein
BG259_20570	COG0420	3'-5' exonuclease activity
BG259_20575	COG0419	ATPase involved in DNA repair
BG259_20585	COG3469	chitinase activity
BG259_20615	COG3040	lipid binding
BG259_20625	COG2814	Major facilitator Superfamily
BG259_20635	COG1288	antiporter activity
BG259_20645	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BG259_20660	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BG259_20670	COG0583	DNA-binding transcription factor activity
BG259_20675	COG0277	FAD linked oxidase domain protein
BG259_20710	COG0840	transmembrane signaling receptor activity
BG259_20740	COG5001	Diguanylate cyclase
BG259_20745	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BG259_20750	COG2146	nitrite reductase [NAD(P)H] activity
BG259_20755	COG2116	formate transmembrane transporter activity
BG259_20775	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BG259_20815	COG2814	Major facilitator Superfamily
BG259_20820	COG3118	belongs to the thioredoxin family
BG259_20825	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BG259_20850	COG1566	PFAM secretion protein HlyD family protein
BG259_20860	COG0628	permease
BG259_20870	COG1482	cell wall glycoprotein biosynthetic process
BG259_20875	COG2271	Major facilitator Superfamily
BG259_20880	COG3851	Histidine kinase
BG259_20885	COG2197	response regulator
BG259_20945	COG1328	CTP reductase activity
BG259_20950	COG0602	queuosine metabolic process
BG259_20955	COG0534	Mate efflux family protein
BG259_20970	COG0189	ligase activity
BG259_20970	COG4067	protein conserved in archaea
BG259_20980	COG3111	PFAM Bacterial OB fold (BOF) protein
BG259_20990	COG0725	ABC transporter, periplasmic molybdate-binding protein
BG259_20995	COG4149	molybdate abc transporter
BG259_21000	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BG259_21010	COG5001	Diguanylate cyclase
BG259_21010	COG4251	negative regulation of phosphorylation
BG259_21010	COG3706	GGDEF domain
BG259_21010	COG2203	Gaf domain
BG259_21025	COG3706	GGDEF domain
BG259_21040	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BG259_21045	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BG259_21070	COG3140	Belongs to the UPF0181 family
BG259_21095	COG0023	Translation Initiation Factor
BG259_21115	COG0045	succinate-CoA ligase (ADP-forming) activity
BG259_21115	COG1042	CoA-binding domain protein
BG259_21115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG259_21125	COG0583	DNA-binding transcription factor activity
BG259_21135	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BG259_21140	COG3447	MASE1 domain protein
BG259_21140	COG5001	Diguanylate cyclase
BG259_21140	COG5002	protein histidine kinase activity
BG259_21150	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BG259_21155	COG1984	allophanate hydrolase subunit 2
BG259_21165	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BG259_21170	COG4181	ATPase activity
BG259_21180	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BG259_21185	COG3300	MHYT domain
BG259_21185	COG5001	Diguanylate cyclase
BG259_21195	COG0484	heat shock protein binding
BG259_21230	COG2050	protein possibly involved in aromatic compounds catabolism
BG259_21245	COG2067	long-chain fatty acid transport protein
BG259_21250	COG2267	carboxylic ester hydrolase activity
BG259_21265	COG1410	methionine synthase
BG259_21265	COG0646	methionine synthase
BG259_21285	COG0737	Belongs to the 5'-nucleotidase family
BG259_21290	COG3593	DNA synthesis involved in DNA repair
BG259_21300	COG0583	DNA-binding transcription factor activity
BG259_21310	COG2116	formate transmembrane transporter activity
BG259_21320	COG3038	cytochrome b561
BG259_21335	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BG259_21340	COG0513	Belongs to the DEAD box helicase family
BG259_21360	COG0546	phosphoglycolate phosphatase activity
BG259_21365	COG0784	Response regulator, receiver
BG259_21365	COG3437	response regulator, receiver
BG259_21380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_21390	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG259_21400	COG2207	Transcriptional regulator
BG259_21405	COG1979	alcohol dehydrogenase
BG259_21415	COG1126	abc transporter atp-binding protein
BG259_21420	COG0765	amino acid transport
BG259_21425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BG259_21430	COG0765	amino acid transport
BG259_21435	COG2199	diguanylate cyclase activity
BG259_21435	COG2200	EAL domain
BG259_21435	COG2203	Gaf domain
BG259_21450	COG1609	Transcriptional regulator
BG259_21455	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_21455	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_21460	COG1105	Belongs to the carbohydrate kinase PfkB family
BG259_21465	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_21465	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BG259_21465	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_21495	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_21500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_21510	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BG259_21520	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BG259_21525	COG0509	glycine decarboxylation via glycine cleavage system
BG259_21560	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_21570	COG2814	Major facilitator Superfamily
BG259_21590	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BG259_21595	COG0583	DNA-binding transcription factor activity
BG259_21610	COG2176	DNA-directed DNA polymerase activity
BG259_21620	COG1733	regulation of RNA biosynthetic process
BG259_21635	COG1132	(ABC) transporter
BG259_21665	COG2076	Multidrug Resistance protein
BG259_21680	COG0671	phosphoesterase, PA-phosphatase related
BG259_21685	COG0446	pyridine nucleotide-disulphide oxidoreductase
BG259_21685	COG1902	pentaerythritol trinitrate reductase activity
BG259_21695	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BG259_21700	COG1845	cytochrome c oxidase, subunit III
BG259_21705	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BG259_21710	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BG259_21720	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_21730	COG1024	Enoyl-CoA hydratase
BG259_21735	COG1024	Enoyl-CoA hydratase
BG259_21750	COG0183	Belongs to the thiolase family
BG259_21760	COG1960	acyl-CoA dehydrogenase activity
BG259_21765	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BG259_21770	COG1024	Enoyl-CoA hydratase
BG259_21810	COG3278	Belongs to the heme-copper respiratory oxidase family
BG259_21835	COG2962	Rard protein
BG259_21850	COG0835	chemotaxis
BG259_21850	COG0784	Response regulator, receiver
BG259_21860	COG0778	Nitroreductase
BG259_21870	COG2197	response regulator
BG259_21880	COG3706	GGDEF domain
BG259_21885	COG2197	response regulator
BG259_21890	COG5001	Diguanylate cyclase
BG259_21890	COG3300	MHYT domain
BG259_21895	COG2205	protein histidine kinase activity
BG259_21895	COG0784	Response regulator, receiver
BG259_21910	COG4608	Belongs to the ABC transporter superfamily
BG259_21915	COG0444	Belongs to the ABC transporter superfamily
BG259_21920	COG4166	transmembrane transport
BG259_21925	COG4239	(ABC) transporter, permease
BG259_21930	COG4174	ABC transporter (Permease)
BG259_21935	COG5002	protein histidine kinase activity
BG259_21940	COG0745	RESPONSE REGULATOR receiver
BG259_21955	COG4771	TonB-dependent receptor
BG259_21960	COG1120	ATPase activity
BG259_21965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_21970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_21975	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BG259_21980	COG4772	TonB-dependent receptor
BG259_22005	COG4264	IucA IucC family
BG259_22010	COG0019	diaminopimelate decarboxylase activity
BG259_22015	COG2017	converts alpha-aldose to the beta-anomer
BG259_22020	COG1940	carbohydrate kinase activity
BG259_22025	COG2814	Major facilitator Superfamily
BG259_22025	COG0477	Major facilitator Superfamily
BG259_22030	COG0457	Tetratricopeptide repeat
BG259_22090	COG1522	sequence-specific DNA binding
BG259_22125	COG0515	serine threonine protein kinase
BG259_22150	COG3501	Rhs element vgr protein
BG259_22170	COG2885	chlorophyll binding
BG259_22190	COG0739	heme binding
BG259_22195	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BG259_22225	COG3069	C4-dicarboxylate transmembrane transporter activity
BG259_22230	COG1704	LemA family
BG259_22235	COG0501	Belongs to the peptidase M48B family
BG259_22260	COG0641	radical SAM
BG259_22280	COG3111	PFAM Bacterial OB fold (BOF) protein
BG259_22285	COG1597	lipid kinase activity
BG259_22290	COG0583	DNA-binding transcription factor activity
BG259_22300	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BG259_22310	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BG259_22370	COG0714	Associated with various cellular activities
BG259_22375	COG0641	radical SAM
BG259_22380	COG3119	arylsulfatase activity
BG259_22385	COG0583	DNA-binding transcription factor activity
BG259_22395	COG3119	arylsulfatase activity
BG259_22400	COG3119	arylsulfatase activity
BG259_22430	COG2205	protein histidine kinase activity
BG259_22430	COG2198	Histidine kinase
BG259_22430	COG0784	Response regulator, receiver
BG259_22435	COG1879	ABC-type sugar transport system periplasmic component
BG259_22445	COG0210	DNA helicase
BG259_22450	COG1289	transmembrane transporter activity
BG259_22485	COG3530	Putative quorum-sensing-regulated virulence factor
BG259_22520	COG3186	Phenylalanine-4-hydroxylase
BG259_22530	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BG259_22535	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BG259_22555	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BG259_22565	COG1454	alcohol dehydrogenase
BG259_22570	COG2133	pyrroloquinoline quinone binding
BG259_22575	COG1619	proteins homologs of microcin C7 resistance protein MccF
BG259_22585	COG0783	Belongs to the Dps family
BG259_22590	COG0840	transmembrane signaling receptor activity
BG259_22615	COG2205	protein histidine kinase activity
BG259_22615	COG0784	Response regulator, receiver
BG259_22620	COG1538	Outer membrane efflux protein
BG259_22650	COG1136	(ABC) transporter
BG259_22650	COG0577	efflux transmembrane transporter activity
BG259_22670	COG2199	diguanylate cyclase activity
BG259_22680	COG3036	rescue of stalled ribosome
BG259_22685	COG1278	Cold shock
BG259_22750	COG3504	Conjugal transfer protein
BG259_22780	COG2186	Transcriptional regulator
BG259_22785	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BG259_22790	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BG259_22795	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BG259_22800	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BG259_22805	COG1063	alcohol dehydrogenase
BG259_22810	COG0246	Mannitol dehydrogenase
BG259_22820	COG0800	Aldolase
BG259_22825	COG4948	Mandelate Racemase Muconate Lactonizing
BG259_22830	COG2731	YhcH YjgK YiaL family protein
BG259_22835	COG0546	phosphoglycolate phosphatase activity
BG259_22910	COG4974	Belongs to the 'phage' integrase family
BG259_22965	COG2003	Belongs to the UPF0758 family
BG259_22975	COG4608	Belongs to the ABC transporter superfamily
BG259_22980	COG0444	Belongs to the ABC transporter superfamily
BG259_22985	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG259_22990	COG0601	transmembrane transport
BG259_22995	COG0747	negative chemotaxis
BG259_23125	COG1403	HNH endonuclease
BG259_23160	COG1388	LysM domain
BG259_23160	COG1470	cell adhesion involved in biofilm formation
BG259_23170	COG3969	phosphoadenosine phosphosulfate
BG259_23175	COG1475	DNA binding
BG259_23190	COG3152	Membrane
BG259_23210	COG1742	UPF0060 membrane protein
BG259_23215	COG4974	Belongs to the 'phage' integrase family
BG259_23225	COG2885	chlorophyll binding
BG259_23235	COG0545	Peptidyl-prolyl cis-trans isomerase
BG259_23265	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BG259_23275	COG0840	transmembrane signaling receptor activity
BG259_23295	COG2195	Cleaves the N-terminal amino acid of tripeptides
BG259_23310	COG2197	response regulator
BG259_23315	COG3850	Histidine kinase
BG259_23320	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BG259_23340	COG3005	denitrification pathway
BG259_23365	COG0183	Belongs to the thiolase family
BG259_23375	COG1280	lysine exporter protein (LysE YggA)
BG259_23385	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG259_23390	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG259_23460	COG2926	Belongs to the UPF0265 family
BG259_23465	COG0534	Mate efflux family protein
BG259_23470	COG0673	inositol 2-dehydrogenase activity
BG259_23475	COG5002	protein histidine kinase activity
BG259_23475	COG0784	Response regulator, receiver
BG259_23475	COG2205	protein histidine kinase activity
BG259_23495	COG0583	DNA-binding transcription factor activity
BG259_23505	COG1522	sequence-specific DNA binding
BG259_23510	COG0531	amino acid
BG259_23515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG259_23525	COG2205	protein histidine kinase activity
BG259_23530	COG0745	RESPONSE REGULATOR receiver
BG259_23555	COG1566	PFAM secretion protein HlyD family protein
BG259_23560	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BG259_23565	COG2239	Acts as a magnesium transporter
BG259_23570	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BG259_23575	COG0402	S-adenosylhomocysteine deaminase activity
BG259_23590	COG1418	mRNA catabolic process
BG259_23615	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BG259_23635	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BG259_23650	COG4221	oxidoreductase activity
BG259_23665	COG3976	FMN-binding domain protein
BG259_23665	COG1053	succinate dehydrogenase
BG259_23670	COG4948	Mandelate Racemase Muconate Lactonizing
BG259_23675	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_23680	COG0745	RESPONSE REGULATOR receiver
BG259_23685	COG2205	protein histidine kinase activity
BG259_23695	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BG259_23700	COG2194	sulfuric ester hydrolase activity
BG259_23705	COG0673	inositol 2-dehydrogenase activity
BG259_23710	COG4977	sequence-specific DNA binding
BG259_23715	COG1335	isochorismatase
BG259_23725	COG2814	Major facilitator Superfamily
BG259_23745	COG0583	DNA-binding transcription factor activity
BG259_23785	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BG259_23795	COG3217	Mosc domain protein beta barrel domain protein
BG259_23795	COG0633	Ferredoxin
BG259_23795	COG3217	Mosc domain protein beta barrel domain protein
BG259_23795	COG0633	Ferredoxin
BG259_23800	COG0401	homolog of Blt101
BG259_23810	COG2354	Protein conserved in bacteria
BG259_23835	COG0741	lytic transglycosylase activity
BG259_23885	COG1175	transmembrane transport
BG259_23900	COG3842	ATPase activity
BG259_23920	COG0489	protein tyrosine kinase activity
BG259_23920	COG3206	protein involved in exopolysaccharide biosynthesis
BG259_23930	COG0438	transferase activity, transferring glycosyl groups
BG259_23965	COG1309	transcriptional regulator
BG259_23970	COG2130	NADP-dependent
BG259_23980	COG0753	catalase activity
BG259_23985	COG2084	Dehydrogenase
BG259_23995	COG0583	DNA-binding transcription factor activity
BG259_24005	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_24010	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_24020	COG2207	Transcriptional regulator
BG259_24025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_24025	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_24025	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BG259_24040	COG0583	DNA-binding transcription factor activity
BG259_24045	COG1566	PFAM secretion protein HlyD family protein
BG259_24080	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BG259_24090	COG0583	DNA-binding transcription factor activity
BG259_24095	COG2207	Transcriptional regulator
BG259_24095	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BG259_24100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG259_24120	COG0095	Lipoate-protein ligase
BG259_24140	COG0513	Belongs to the DEAD box helicase family
BG259_24150	COG0583	DNA-binding transcription factor activity
BG259_24175	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_24180	COG2814	Major facilitator Superfamily
BG259_24190	COG1902	pentaerythritol trinitrate reductase activity
BG259_24205	COG3122	Protein conserved in bacteria
BG259_24225	COG0583	DNA-binding transcription factor activity
BG259_24240	COG0252	asparaginase activity
BG259_24250	COG0574	Belongs to the PEP-utilizing enzyme family
BG259_24250	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BG259_24260	COG2197	response regulator
BG259_24265	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BG259_24280	COG0583	DNA-binding transcription factor activity
BG259_24285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BG259_24295	COG1538	Outer membrane efflux protein
BG259_24300	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BG259_24305	COG0786	glutamate:sodium symporter activity
BG259_24340	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BG259_24345	COG0318	PFAM AMP-dependent synthetase and ligase
BG259_24355	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BG259_24395	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BG259_24405	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BG259_24435	COG3338	carbonate dehydratase activity
BG259_24465	COG1063	alcohol dehydrogenase
BG259_24470	COG0156	8-amino-7-oxononanoate synthase activity
BG259_24495	COG0745	RESPONSE REGULATOR receiver
BG259_24520	COG0346	lactoylglutathione lyase activity
BG259_24570	COG2200	EAL domain
BG259_24590	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG259_24605	COG2204	response regulator
BG259_24630	COG1987	bacterial-type flagellum assembly
BG259_24640	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BG259_24655	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG259_24665	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BG259_24670	COG1516	flagellar protein fliS
BG259_24685	COG1580	Controls the rotational direction of flagella during chemotaxis
BG259_24690	COG1191	sigma factor activity
BG259_24695	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BG259_24700	COG1360	Flagellar Motor Protein
BG259_24765	COG1136	(ABC) transporter
BG259_24790	COG0672	)-iron permease
BG259_24810	COG2226	methyltransferase
BG259_24850	COG4786	Flagellar basal body rod
BG259_24850	COG1256	bacterial-type flagellum assembly
BG259_24860	COG1706	bacterial-type flagellum-dependent cell motility
BG259_24865	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BG259_24870	COG4786	Flagellar basal body rod
BG259_24875	COG4787	bacterial-type flagellum-dependent cell motility
BG259_24880	COG1749	Flagellar hook protein flgE
BG259_24885	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BG259_24890	COG1558	bacterial-type flagellum-dependent cell motility
BG259_24895	COG1815	bacterial-type flagellum-dependent cell motility
BG259_24915	COG1388	LysM domain
BG259_24915	COG0741	lytic transglycosylase activity
BG259_24940	COG1760	l-serine dehydratase
BG259_24970	COG0583	DNA-binding transcription factor activity
BG259_24980	COG2866	Carboxypeptidase
BG259_24985	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BG259_24995	COG2990	Protein conserved in bacteria
BG259_25020	COG3842	ATPase activity
BG259_25025	COG1840	ABC-type Fe3 transport system, periplasmic component
BG259_25045	COG1609	Transcriptional regulator
BG259_25075	COG3240	lipase activity
BG259_25110	COG1011	Hydrolase
BG259_25160	COG1765	OsmC-like protein
BG259_25165	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_25165	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BG259_25180	COG3046	protein related to deoxyribodipyrimidine photolyase
BG259_25185	COG0415	Belongs to the DNA photolyase family
BG259_25190	COG3706	GGDEF domain
BG259_25205	COG3706	GGDEF domain
BG259_25225	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG259_25230	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BG259_25250	COG3033	Beta-eliminating lyase
BG259_25265	COG0579	oxidoreductase
BG259_25280	COG1114	Component of the transport system for branched-chain amino acids
BG259_25320	COG0583	DNA-binding transcription factor activity
BG259_25345	COG0189	ligase activity
BG259_25350	COG0189	ligase activity
BG259_25350	COG4067	protein conserved in archaea
BG259_25360	COG1166	arginine decarboxylase activity
BG259_25365	COG0010	Belongs to the arginase family
BG259_25370	COG2814	Major facilitator Superfamily
BG259_25375	COG1770	oligopeptidase
BG259_25390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BG259_25395	COG1121	(ABC) transporter
BG259_25400	COG0803	Belongs to the bacterial solute-binding protein 9 family
BG259_25445	COG0848	biopolymer transport protein
BG259_25450	COG0811	peptide transport
BG259_25455	COG0811	peptide transport
BG259_25475	COG0745	RESPONSE REGULATOR receiver
BG259_25485	COG0584	glycerophosphoryl diester phosphodiesterase
BG259_25495	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BG259_25555	COG0312	modulator of DNA gyrase
BG259_25560	COG0312	modulator of DNA gyrase
BG259_25565	COG0351	phosphomethylpyrimidine kinase
BG259_25570	COG1116	anion transmembrane transporter activity
BG259_25575	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BG259_25580	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BG259_25585	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BG259_25600	COG0671	phosphoesterase, PA-phosphatase related
BG259_25605	COG0243	molybdopterin cofactor binding
BG259_25610	COG3005	denitrification pathway
BG259_25620	COG1028	Short-chain dehydrogenase reductase Sdr
BG259_25640	COG0456	acetyltransferase
BG259_25685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG259_25690	COG2356	endonuclease I
BG259_25695	COG0366	Alpha amylase catalytic
BG259_25720	COG2203	Gaf domain
BG259_25720	COG2199	diguanylate cyclase activity
BG259_25740	COG2221	Nitrite and sulphite reductase 4Fe-4S
BG259_25745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BG259_25755	COG1760	l-serine dehydratase
BG259_25780	COG1609	Transcriptional regulator
BG259_25790	COG2814	Major facilitator Superfamily
BG259_25810	COG4771	TonB-dependent receptor
BG259_25815	COG0583	DNA-binding transcription factor activity
BG259_25820	COG4607	ABC-type enterochelin transport system periplasmic component
BG259_25830	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG259_25835	COG4605	iron ion homeostasis
BG259_25840	COG4604	ABC transporter, ATP-binding protein
BG259_25865	COG0739	heme binding
BG259_25890	COG0612	Peptidase, M16
BG259_25895	COG0840	transmembrane signaling receptor activity
BG259_25910	COG1764	response to oxidative stress
BG259_25915	COG1846	Transcriptional regulator
BG259_25920	COG0450	alkyl hydroperoxide reductase
BG259_25925	COG3634	alkyl hydroperoxide reductase activity
BG259_25965	COG0583	DNA-binding transcription factor activity
BG259_25970	COG0366	Alpha amylase catalytic
BG259_26015	COG0346	lactoylglutathione lyase activity
BG259_26035	COG1522	sequence-specific DNA binding
BG259_26050	COG2258	MOSC domain
BG259_26055	COG2153	protein acetylation
BG259_26065	COG3713	MltA-interacting MipA family protein
BG259_26070	COG0513	Belongs to the DEAD box helicase family
BG259_26080	COG1595	DNA-templated transcription, initiation
BG259_26085	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BG259_26100	COG3655	Transcriptional regulator
BG259_26105	COG1312	Catalyzes the dehydration of D-mannonate
BG259_26110	COG2186	Transcriptional regulator
BG259_26120	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BG259_26130	COG0246	Mannitol dehydrogenase
BG259_26135	COG1904	glucuronate isomerase
BG259_26140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_26145	COG0800	Aldolase
BG259_26165	COG1132	(ABC) transporter
BG259_26220	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BG259_26290	COG4166	transmembrane transport
BG259_26320	COG1595	DNA-templated transcription, initiation
BG259_26355	COG0811	peptide transport
BG259_26360	COG0848	biopolymer transport protein
BG259_26365	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
BG259_26370	COG1444	tRNA N-acetyltransferase activity
BG259_26395	COG4608	Belongs to the ABC transporter superfamily
BG259_26400	COG0444	Belongs to the ABC transporter superfamily
BG259_26410	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
BG259_26410	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BG259_26435	COG0772	Belongs to the SEDS family
BG259_26450	COG1566	PFAM secretion protein HlyD family protein
BG259_26455	COG0583	DNA-binding transcription factor activity
BG259_26485	COG3275	phosphorelay sensor kinase activity
BG259_26490	COG3279	Response regulator of the LytR AlgR family
BG259_26500	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BG259_26525	COG0786	glutamate:sodium symporter activity
BG259_26540	COG1131	(ABC) transporter
BG259_26545	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG259_26550	COG0786	glutamate:sodium symporter activity
BG259_26580	COG0561	phosphatase activity
BG259_26585	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BG259_26590	COG3623	hexulose-6-phosphate isomerase
BG259_26625	COG2259	Doxx family
BG259_26635	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BG259_26640	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BG259_26675	COG1136	(ABC) transporter
BG259_26685	COG1349	DNA-binding transcription factor activity
BG259_26690	COG1349	DNA-binding transcription factor activity
BG259_26700	COG2222	sugar isomerase
BG259_26705	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_26710	COG3715	PTS system
BG259_26715	COG3716	PTS system mannose fructose sorbose family IID component
BG259_26720	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BG259_26730	COG0191	fructose-bisphosphate aldolase activity
BG259_26750	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BG259_26820	COG4580	involved in the transport of maltose and maltodextrins
BG259_26825	COG1609	Transcriptional regulator
BG259_26840	COG0395	ABC-type sugar transport system, permease component
BG259_26845	COG2723	6-phospho-beta-galactosidase activity
BG259_26850	COG3842	ATPase activity
BG259_26855	COG1609	Transcriptional regulator
BG259_26860	COG0534	Mate efflux family protein
BG259_26865	COG0564	pseudouridine synthase activity
BG259_26880	COG0561	phosphatase activity
BG259_26890	COG2199	diguanylate cyclase activity
BG259_26900	COG3152	Membrane
BG259_26915	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BG259_26930	COG0583	DNA-binding transcription factor activity
BG259_26965	COG2076	Multidrug Resistance protein
BG259_26990	COG1357	PFAM Pentapeptide repeats (8 copies)
BG259_26995	COG3047	cAMP biosynthetic process
BG259_27015	COG2814	Major facilitator Superfamily
BG259_27035	COG3408	Glycogen debranching enzyme
BG259_27035	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BG259_27075	COG4771	TonB-dependent receptor
BG259_27080	COG1132	(ABC) transporter
BG259_27085	COG1132	(ABC) transporter
BG259_27120	COG0546	phosphoglycolate phosphatase activity
BG259_27150	COG1228	amidohydrolase
BG259_27160	COG3835	regulator
BG259_27165	COG1929	Belongs to the glycerate kinase type-1 family
BG259_27185	COG1982	Orn Lys Arg decarboxylase major
BG259_27190	COG0531	amino acid
BG259_27220	COG0183	Belongs to the thiolase family
BG259_27235	COG0583	DNA-binding transcription factor activity
BG259_27240	COG0477	Major facilitator Superfamily
BG259_27240	COG2814	Major facilitator Superfamily
BG259_27250	COG3962	Belongs to the TPP enzyme family
BG259_27255	COG0673	inositol 2-dehydrogenase activity
BG259_27260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG259_27285	COG0673	inositol 2-dehydrogenase activity
BG259_27290	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BG259_27295	COG1162	GTPase activity
BG259_27300	COG1263	PTS System
BG259_27300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BG259_27335	COG0058	SHG alpha-glucan phosphorylase activity
BG259_27340	COG1640	4-alpha-glucanotransferase
BG259_27345	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BG259_27350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BG259_27355	COG0366	Alpha amylase catalytic
BG259_27370	COG3366	ferrous iron transmembrane transporter activity
BG259_27375	COG0700	Nucleoside recognition
BG259_27380	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BG259_27385	COG3339	Conserved Protein
BG259_27390	COG1301	dicarboxylic acid transport
BG259_27420	COG0583	DNA-binding transcription factor activity
BG259_27455	COG2095	MarC family integral membrane protein
BG259_27460	COG1349	DNA-binding transcription factor activity
BG259_27465	COG0738	Major facilitator superfamily
BG259_27550	COG2994	toxin metabolic process
BG259_27575	COG2801	Transposase and inactivated derivatives
BG259_27690	COG5464	transposase or invertase
BG259_27910	COG1475	DNA binding
BG259_27985	COG3335	DDE superfamily endonuclease
BG259_28125	COG0840	transmembrane signaling receptor activity
BG259_28210	COG0681	Belongs to the peptidase S26 family
BG259_28235	COG1192	Involved in chromosome partitioning
BG259_28240	COG5464	transposase or invertase
BG259_28440	COG0741	lytic transglycosylase activity
BG259_28465	COG1475	DNA binding
BG259_28600	COG1192	Involved in chromosome partitioning
BG259_28625	COG4115	mRNA cleavage
BG259_28630	COG2161	toxin-antitoxin pair type II binding
BG259_28730	COG0741	lytic transglycosylase activity