locus-tag class description F9277_00035 PF00563 EAL domain F9277_00035 PF00990 Diguanylate cyclase, GGDEF domain F9277_00035 PF03707 Bacterial signalling protein N terminal repeat F9277_00035 PF13188 PAS domain F9277_00040 PF02954 Bacterial regulatory protein, Fis family F9277_00045 PF01207 Dihydrouridine synthase (Dus) F9277_00060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9277_00060 PF00289 Biotin carboxylase, N-terminal domain F9277_00060 PF02785 Biotin carboxylase C-terminal domain F9277_00065 PF00364 Biotin-requiring enzyme F9277_00070 PF01220 Dehydroquinase class II F9277_00075 PF13193 AMP-binding enzyme C-terminal domain F9277_00075 PF00501 AMP-binding enzyme F9277_00075 PF16177 Acetyl-coenzyme A synthetase N-terminus F9277_00090 PF12832 MFS_1 like family F9277_00095 PF01627 Hpt domain F9277_00095 PF00072 Response regulator receiver domain F9277_00095 PF00512 His Kinase A (phospho-acceptor) domain F9277_00095 PF00672 HAMP domain F9277_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_00100 PF10415 Fumarase C C-terminus F9277_00100 PF00206 Lyase F9277_00115 PF00474 Sodium:solute symporter family F9277_00125 PF01914 MarC family integral membrane protein F9277_00130 PF00196 Bacterial regulatory proteins, luxR family F9277_00130 PF00072 Response regulator receiver domain F9277_00135 PF11412 Disulphide bond corrector protein DsbC F9277_00135 PF02683 Cytochrome C biogenesis protein transmembrane region F9277_00140 PF03605 Anaerobic c4-dicarboxylate membrane transporter F9277_00145 PF10415 Fumarase C C-terminus F9277_00145 PF00206 Lyase F9277_00150 PF04186 FxsA cytoplasmic membrane protein F9277_00155 PF00588 SpoU rRNA Methylase family F9277_00160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F9277_00160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F9277_00165 PF16527 Two-component sensor protein CpxA, periplasmic domain F9277_00165 PF00672 HAMP domain F9277_00165 PF00512 His Kinase A (phospho-acceptor) domain F9277_00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_00170 PF00486 Transcriptional regulatory protein, C terminal F9277_00170 PF00072 Response regulator receiver domain F9277_00175 PF07813 LTXXQ motif family protein F9277_00180 PF01545 Cation efflux family F9277_00180 PF16916 Dimerisation domain of Zinc Transporter F9277_00185 PF00365 Phosphofructokinase F9277_00190 PF01554 MatE F9277_00195 PF00166 Chaperonin 10 Kd subunit F9277_00200 PF00118 TCP-1/cpn60 chaperonin family F9277_00210 PF02308 MgtC family F9277_00215 PF04055 Radical SAM superfamily F9277_00220 PF09285 Elongation factor P, C-terminal F9277_00220 PF08207 Elongation factor P (EF-P) KOW-like domain F9277_00220 PF01132 Elongation factor P (EF-P) OB domain F9277_00235 PF02313 Fumarate reductase subunit D F9277_00240 PF02300 Fumarate reductase subunit C F9277_00245 PF13183 4Fe-4S dicluster domain F9277_00245 PF13085 2Fe-2S iron-sulfur cluster binding domain F9277_00250 PF00890 FAD binding domain F9277_00250 PF02910 Fumarate reductase flavoprotein C-term F9277_00255 PF00152 tRNA synthetases class II (D, K and N) F9277_00265 PF00440 Bacterial regulatory proteins, tetR family F9277_00265 PF08360 QacR-like protein, C-terminal region F9277_00275 PF01551 Peptidase family M23 F9277_00280 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_00280 PF06426 Serine acetyltransferase, N-terminal F9277_00285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F9277_00285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F9277_00290 PF02556 Preprotein translocase subunit SecB F9277_00295 PF00581 Rhodanese-like domain F9277_00300 PF01676 Metalloenzyme superfamily F9277_00300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F9277_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_00310 PF00672 HAMP domain F9277_00310 PF02743 Cache domain F9277_00315 PF00939 Sodium:sulfate symporter transmembrane region F9277_00320 PF02666 Phosphatidylserine decarboxylase F9277_00325 PF03193 RsgA GTPase F9277_00330 PF00929 Exonuclease F9277_00395 PF08331 Domain of unknown function (DUF1730) F9277_00400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F9277_00405 PF01520 N-acetylmuramoyl-L-alanine amidase F9277_00410 PF08676 MutL C terminal dimerisation domain F9277_00410 PF01119 DNA mismatch repair protein, C-terminal domain F9277_00420 PF17209 Hfq protein F9277_00425 PF01926 50S ribosome-binding GTPase F9277_00425 PF13167 GTP-binding GTPase N-terminal F9277_00425 PF16360 GTP-binding GTPase Middle Region F9277_00430 PF12221 Bacterial membrane protein N terminal F9277_00430 PF01145 SPFH domain / Band 7 family F9277_00435 PF01145 SPFH domain / Band 7 family F9277_00440 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F9277_00445 PF00709 Adenylosuccinate synthetase F9277_00455 PF08238 Sel1 repeat F9277_00460 PF00970 Oxidoreductase FAD-binding domain F9277_00460 PF00175 Oxidoreductase NAD-binding domain F9277_00460 PF00042 Globin F9277_00465 PF02082 Transcriptional regulator F9277_00470 PF08461 Ribonuclease R winged-helix domain F9277_00470 PF08206 Ribonuclease B OB domain F9277_00470 PF00773 RNB domain F9277_00470 PF17876 Cold shock domain F9277_00470 PF00575 S1 RNA binding domain F9277_00475 PF00588 SpoU rRNA Methylase family F9277_00475 PF08032 RNA 2'-O ribose methyltransferase substrate binding F9277_00480 PF13419 Haloacid dehalogenase-like hydrolase F9277_00485 PF00579 tRNA synthetases class I (W and Y) F9277_00495 PF00267 Gram-negative porin F9277_00505 PF00117 Glutamine amidotransferase class-I F9277_00510 PF00202 Aminotransferase class-III F9277_00515 PF04958 Arginine N-succinyltransferase beta subunit F9277_00520 PF00171 Aldehyde dehydrogenase family F9277_00530 PF00027 Cyclic nucleotide-binding domain F9277_00530 PF13545 Crp-like helix-turn-helix domain F9277_00535 PF00485 Phosphoribulokinase / Uridine kinase family F9277_00540 PF06794 Uncharacterised protein family (UPF0270) F9277_00545 PF00561 alpha/beta hydrolase fold F9277_00555 PF12848 ABC transporter F9277_00555 PF00005 ABC transporter F9277_00565 PF02525 Flavodoxin-like fold F9277_00570 PF00999 Sodium/hydrogen exchanger family F9277_00570 PF02254 TrkA-N domain F9277_00580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_00590 PF01112 Asparaginase F9277_00595 PF04102 SlyX F9277_00605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_00605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F9277_00610 PF08348 YheO-like PAS domain F9277_00610 PF13309 HTH domain F9277_00615 PF02635 DsrE/DsrF-like family F9277_00620 PF02635 DsrE/DsrF-like family F9277_00625 PF04077 DsrH like protein F9277_00630 PF00164 Ribosomal protein S12/S23 F9277_00635 PF00177 Ribosomal protein S7p/S5e F9277_00640 PF00679 Elongation factor G C-terminus F9277_00640 PF14492 Elongation Factor G, domain II F9277_00640 PF03764 Elongation factor G, domain IV F9277_00640 PF00009 Elongation factor Tu GTP binding domain F9277_00640 PF03144 Elongation factor Tu domain 2 F9277_00645 PF00009 Elongation factor Tu GTP binding domain F9277_00645 PF03143 Elongation factor Tu C-terminal domain F9277_00645 PF03144 Elongation factor Tu domain 2 F9277_00650 PF04324 BFD-like [2Fe-2S] binding domain F9277_00655 PF00210 Ferritin-like domain F9277_00660 PF03949 Malic enzyme, NAD binding domain F9277_00660 PF00390 Malic enzyme, N-terminal domain F9277_00665 PF01340 Met Apo-repressor, MetJ F9277_00670 PF01053 Cys/Met metabolism PLP-dependent enzyme F9277_00675 PF03447 Homoserine dehydrogenase, NAD binding domain F9277_00675 PF00742 Homoserine dehydrogenase F9277_00675 PF00696 Amino acid kinase family F9277_00680 PF02219 Methylenetetrahydrofolate reductase F9277_00690 PF00311 Phosphoenolpyruvate carboxylase F9277_00695 PF01546 Peptidase family M20/M25/M40 F9277_00695 PF07687 Peptidase dimerisation domain F9277_00700 PF02774 Semialdehyde dehydrogenase, dimerisation domain F9277_00700 PF01118 Semialdehyde dehydrogenase, NAD binding domain F9277_00705 PF00696 Amino acid kinase family F9277_00710 PF00764 Arginosuccinate synthase F9277_00715 PF00206 Lyase F9277_00715 PF14698 Argininosuccinate lyase C-terminal F9277_00715 PF00583 Acetyltransferase (GNAT) family F9277_00730 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_00730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_00735 PF08534 Redoxin F9277_00735 PF00462 Glutaredoxin F9277_00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_00740 PF03466 LysR substrate binding domain F9277_00745 PF17092 Penicillin-binding protein OB-like domain F9277_00745 PF00912 Transglycosylase F9277_00745 PF00905 Penicillin binding protein transpeptidase domain F9277_00770 PF00263 Bacterial type II and III secretion system protein F9277_00770 PF11741 AMIN domain F9277_00770 PF03958 Bacterial type II/III secretion system short domain F9277_00770 PF07660 Secretin and TonB N terminus short domain F9277_00775 PF01202 Shikimate kinase F9277_00780 PF01761 3-dehydroquinate synthase F9277_00790 PF02086 D12 class N6 adenine-specific DNA methyltransferase F9277_00795 PF18755 Restriction Enzyme Adenine Methylase Associated F9277_00795 PF01555 DNA methylase F9277_00805 PF00834 Ribulose-phosphate 3 epimerase family F9277_00810 PF01250 Ribosomal protein S6 F9277_00815 PF01084 Ribosomal protein S18 F9277_00820 PF03948 Ribosomal protein L9, C-terminal domain F9277_00820 PF01281 Ribosomal protein L9, N-terminal domain F9277_00830 PF00772 DnaB-like helicase N terminal domain F9277_00830 PF03796 DnaB-like helicase C terminal domain F9277_00835 PF00842 Alanine racemase, C-terminal domain F9277_00835 PF01168 Alanine racemase, N-terminal domain F9277_00845 PF01894 Uncharacterised protein family UPF0047 F9277_00850 PF00342 Phosphoglucose isomerase F9277_00860 PF01475 Ferric uptake regulator family F9277_00890 PF00239 Resolvase, N terminal domain F9277_00890 PF02796 Helix-turn-helix domain of resolvase F9277_00895 PF00589 Phage integrase family F9277_00900 PF00589 Phage integrase family F9277_00905 PF01207 Dihydrouridine synthase (Dus) F9277_00925 PF00667 FAD binding domain F9277_00925 PF00175 Oxidoreductase NAD-binding domain F9277_00925 PF00258 Flavodoxin F9277_00930 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9277_00930 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9277_00935 PF01507 Phosphoadenosine phosphosulfate reductase family F9277_00995 PF00999 Sodium/hydrogen exchanger family F9277_01000 PF02310 B12 binding domain F9277_01000 PF02965 Vitamin B12 dependent methionine synthase, activation domain F9277_01000 PF00809 Pterin binding enzyme F9277_01000 PF02607 B12 binding domain F9277_01000 PF02574 Homocysteine S-methyltransferase F9277_01005 PF01842 ACT domain F9277_01005 PF00696 Amino acid kinase family F9277_01015 PF00266 Aminotransferase class-V F9277_01025 PF00005 ABC transporter F9277_01025 PF17760 UvrA interaction domain F9277_01025 PF17755 UvrA DNA-binding domain F9277_01030 PF00483 Nucleotidyl transferase F9277_01035 PF00196 Bacterial regulatory proteins, luxR family F9277_01040 PF00436 Single-strand binding protein family F9277_01045 PF00990 Diguanylate cyclase, GGDEF domain F9277_01045 PF00563 EAL domain F9277_01045 PF17157 Gammaproteobacterial periplasmic sensor domain F9277_01065 PF00263 Bacterial type II and III secretion system protein F9277_01065 PF03958 Bacterial type II/III secretion system short domain F9277_01070 PF13401 AAA domain F9277_01070 PF01471 Putative peptidoglycan binding domain F9277_01080 PF00437 Type II/IV secretion system protein F9277_01080 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F9277_01085 PF00482 Type II secretion system (T2SS), protein F F9277_01095 PF07963 Prokaryotic N-terminal methylation motif F9277_01095 PF08334 Type II secretion system (T2SS), protein G F9277_01135 PF04085 rod shape-determining protein MreC F9277_01140 PF04093 rod shape-determining protein MreD F9277_01145 PF02545 Maf-like protein F9277_01150 PF00575 S1 RNA binding domain F9277_01150 PF10150 Ribonuclease E/G family F9277_01155 PF13502 AsmA-like C-terminal region F9277_01155 PF13116 Protein of unknown function F9277_01160 PF00795 Carbon-nitrogen hydrolase F9277_01165 PF01523 Putative modulator of DNA gyrase F9277_01170 PF02562 PhoH-like protein F9277_01170 PF13638 PIN domain F9277_01175 PF18339 RapA N-terminal Tudor like domain 1 F9277_01175 PF18337 RapA N-terminal Tudor like domain F9277_01175 PF00271 Helicase conserved C-terminal domain F9277_01175 PF12137 RNA polymerase recycling family C-terminal F9277_01175 PF00176 SNF2 family N-terminal domain F9277_01185 PF00849 RNA pseudouridylate synthase F9277_01190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_01190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9277_01195 PF04751 Protein of unknown function (DUF615) F9277_01200 PF01523 Putative modulator of DNA gyrase F9277_01205 PF01769 Divalent cation transporter F9277_01205 PF00571 CBS domain F9277_01205 PF03448 MgtE intracellular N domain F9277_01210 PF00381 PTS HPr component phosphorylation site F9277_01215 PF03668 P-loop ATPase protein family F9277_01220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_01225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F9277_01230 PF00309 Sigma-54 factor, Activator interacting domain (AID) F9277_01230 PF04552 Sigma-54, DNA binding domain F9277_01230 PF04963 Sigma-54 factor, core binding domain F9277_01235 PF12399 Branched-chain amino acid ATP-binding cassette transporter F9277_01235 PF00005 ABC transporter F9277_01240 PF03968 OstA-like protein F9277_01250 PF01380 SIS domain F9277_01250 PF00571 CBS domain F9277_01255 PF01699 Sodium/calcium exchanger protein F9277_01260 PF00005 ABC transporter F9277_01265 PF02405 Permease MlaE F9277_01270 PF02470 MlaD protein F9277_01275 PF05494 MlaC protein F9277_01285 PF01722 BolA-like protein F9277_01290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F9277_01295 PF01553 Acyltransferase F9277_01300 PF01042 Endoribonuclease L-PSP F9277_01305 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F9277_01305 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F9277_01310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F9277_01310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F9277_01320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F9277_01320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F9277_01335 PF06877 Regulator of ribonuclease activity B F9277_01345 PF00583 Acetyltransferase (GNAT) family F9277_01355 PF10458 Valyl tRNA synthetase tRNA binding arm F9277_01355 PF08264 Anticodon-binding domain of tRNA F9277_01355 PF00133 tRNA synthetases class I (I, L, M and V) F9277_01360 PF04364 DNA polymerase III chi subunit, HolC F9277_01365 PF00883 Cytosol aminopeptidase family, catalytic domain F9277_01365 PF02789 Cytosol aminopeptidase family, N-terminal domain F9277_01370 PF03739 Lipopolysaccharide export system permease LptF/LptG F9277_01375 PF03739 Lipopolysaccharide export system permease LptF/LptG F9277_01385 PF00106 short chain dehydrogenase F9277_01405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_01410 PF02378 Phosphotransferase system, EIIC F9277_01415 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F9277_01420 PF02056 Family 4 glycosyl hydrolase F9277_01420 PF11975 Family 4 glycosyl hydrolase C-terminal domain F9277_01425 PF04794 YdjC-like protein F9277_01430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F9277_01430 PF00356 Bacterial regulatory proteins, lacI family F9277_01435 PF00072 Response regulator receiver domain F9277_01485 PF00171 Aldehyde dehydrogenase family F9277_01515 PF17200 Single Cache domain 2 F9277_01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_01515 PF00672 HAMP domain F9277_01555 PF01464 Transglycosylase SLT domain F9277_01555 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F9277_01560 PF04362 Bacterial Fe(2+) trafficking F9277_01565 PF14815 NUDIX domain F9277_01565 PF00730 HhH-GPD superfamily base excision DNA repair protein F9277_01565 PF00633 Helix-hairpin-helix motif F9277_01570 PF02390 Putative methyltransferase F9277_01575 PF02086 D12 class N6 adenine-specific DNA methyltransferase F9277_01580 PF04960 Glutaminase F9277_01585 PF06969 HemN C-terminal domain F9277_01585 PF04055 Radical SAM superfamily F9277_01590 PF01725 Ham1 family F9277_01600 PF02594 Uncharacterised ACR, YggU family COG1872 F9277_01605 PF02325 YGGT family F9277_01610 PF14748 Pyrroline-5-carboxylate reductase dimerisation F9277_01610 PF03807 NADP oxidoreductase coenzyme F420-dependent F9277_01615 PF01168 Alanine racemase, N-terminal domain F9277_01620 PF00437 Type II/IV secretion system protein F9277_01625 PF00437 Type II/IV secretion system protein F9277_01630 PF03652 Holliday junction resolvase F9277_01635 PF02622 Uncharacterized ACR, COG1678 F9277_01640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F9277_01640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F9277_01645 PF04452 RNA methyltransferase F9277_01650 PF04231 Endonuclease I F9277_01660 PF10263 SprT-like family F9277_01660 PF17283 SprT-like zinc ribbon domain F9277_01670 PF02772 S-adenosylmethionine synthetase, central domain F9277_01670 PF02773 S-adenosylmethionine synthetase, C-terminal domain F9277_01670 PF00438 S-adenosylmethionine synthetase, N-terminal domain F9277_01675 PF00456 Transketolase, thiamine diphosphate binding domain F9277_01675 PF02779 Transketolase, pyrimidine binding domain F9277_01675 PF02780 Transketolase, C-terminal domain F9277_01685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9277_01685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9277_01690 PF00162 Phosphoglycerate kinase F9277_01695 PF01116 Fructose-bisphosphate aldolase class-II F9277_01700 PF00924 Mechanosensitive ion channel F9277_01700 PF05552 Conserved TM helix F9277_01710 PF01810 LysE type translocator F9277_01715 PF03466 LysR substrate binding domain F9277_01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_01720 PF04402 Protein of unknown function (DUF541) F9277_01725 PF01842 ACT domain F9277_01725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9277_01725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_01730 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F9277_01735 PF01812 5-formyltetrahydrofolate cyclo-ligase family F9277_01745 PF05164 Cell division protein ZapA F9277_01755 PF03695 Uncharacterised protein family (UPF0149) F9277_01760 PF01494 FAD binding domain F9277_01765 PF01494 FAD binding domain F9277_01785 PF03937 Flavinator of succinate dehydrogenase F9277_01795 PF02910 Fumarate reductase flavoprotein C-term F9277_01795 PF00890 FAD binding domain F9277_01805 PF08281 Sigma-70, region 4 F9277_01805 PF04542 Sigma-70 region 2 F9277_01810 PF03872 Anti sigma-E protein RseA, N-terminal domain F9277_01810 PF03873 Anti sigma-E protein RseA, C-terminal domain F9277_01815 PF17188 MucB/RseB C-terminal domain F9277_01815 PF03888 MucB/RseB N-terminal domain F9277_01825 PF00679 Elongation factor G C-terminus F9277_01825 PF06421 GTP-binding protein LepA C-terminus F9277_01825 PF03144 Elongation factor Tu domain 2 F9277_01825 PF00009 Elongation factor Tu GTP binding domain F9277_01830 PF10502 Signal peptidase, peptidase S26 F9277_01835 PF14622 Ribonuclease-III-like F9277_01835 PF00035 Double-stranded RNA binding motif F9277_01840 PF01926 50S ribosome-binding GTPase F9277_01840 PF07650 KH domain F9277_01845 PF11967 Recombination protein O N terminal F9277_01845 PF02565 Recombination protein O C terminal F9277_01850 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F9277_01855 PF01648 4'-phosphopantetheinyl transferase superfamily F9277_01860 PF01627 Hpt domain F9277_01860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F9277_01860 PF00512 His Kinase A (phospho-acceptor) domain F9277_01860 PF00672 HAMP domain F9277_01860 PF00072 Response regulator receiver domain F9277_01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_01870 PF01938 TRAM domain F9277_01870 PF05958 tRNA (Uracil-5-)-methyltransferase F9277_01875 PF13291 ACT domain F9277_01875 PF04607 Region found in RelA / SpoT proteins F9277_01875 PF02824 TGS domain F9277_01880 PF03819 MazG nucleotide pyrophosphohydrolase domain F9277_01885 PF06418 CTP synthase N-terminus F9277_01885 PF00117 Glutamine amidotransferase class-I F9277_01890 PF00113 Enolase, C-terminal TIM barrel domain F9277_01890 PF03952 Enolase, N-terminal domain F9277_01895 PF04977 Septum formation initiator F9277_01900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F9277_01905 PF02542 YgbB family F9277_01910 PF01142 tRNA pseudouridine synthase D (TruD) F9277_01915 PF01975 Survival protein SurE F9277_01925 PF01551 Peptidase family M23 F9277_01925 PF01476 LysM domain F9277_01930 PF04545 Sigma-70, region 4 F9277_01930 PF04539 Sigma-70 region 3 F9277_01930 PF04542 Sigma-70 region 2 F9277_01930 PF00140 Sigma-70 factor, region 1.2 F9277_01935 PF05190 MutS family domain IV F9277_01935 PF00488 MutS domain V F9277_01935 PF05192 MutS domain III F9277_01935 PF05188 MutS domain II F9277_01935 PF01624 MutS domain I F9277_01940 PF02464 Competence-damaged protein F9277_01945 PF00154 recA bacterial DNA recombination protein F9277_01950 PF02631 RecX family F9277_01955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F9277_01955 PF02272 DHHA1 domain F9277_01955 PF01411 tRNA synthetases class II (A) F9277_01960 PF13840 ACT domain F9277_01960 PF00696 Amino acid kinase family F9277_01960 PF01842 ACT domain F9277_01965 PF02599 Global regulator protein family F9277_02015 PF04277 Oxaloacetate decarboxylase, gamma chain F9277_02020 PF00682 HMGL-like F9277_02020 PF00364 Biotin-requiring enzyme F9277_02020 PF02436 Conserved carboxylase domain F9277_02025 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F9277_02035 PF09335 SNARE associated Golgi protein F9277_02040 PF00675 Insulinase (Peptidase family M16) F9277_02040 PF05193 Peptidase M16 inactive domain F9277_02045 PF04262 Glutamate-cysteine ligase F9277_02055 PF02664 S-Ribosylhomocysteinase (LuxS) F9277_02060 PF03471 Transporter associated domain F9277_02060 PF01595 Cyclin M transmembrane N-terminal domain F9277_02060 PF00571 CBS domain F9277_02065 PF01578 Cytochrome C assembly protein F9277_02070 PF02978 Signal peptide binding domain F9277_02070 PF00448 SRP54-type protein, GTPase domain F9277_02070 PF02881 SRP54-type protein, helical bundle domain F9277_02075 PF00886 Ribosomal protein S16 F9277_02080 PF01782 RimM N-terminal domain F9277_02080 PF05239 PRC-barrel domain F9277_02085 PF01746 tRNA (Guanine-1)-methyltransferase F9277_02090 PF01245 Ribosomal protein L19 F9277_02095 PF03884 DNA gyrase inhibitor YacG F9277_02100 PF07072 Cell division protein F9277_02105 PF01121 Dephospho-CoA kinase F9277_02110 PF06750 Bacterial Peptidase A24 N-terminal domain F9277_02110 PF01478 Type IV leader peptidase family F9277_02115 PF00482 Type II secretion system (T2SS), protein F F9277_02120 PF00437 Type II/IV secretion system protein F9277_02120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F9277_02125 PF00114 Pilin (bacterial filament) F9277_02125 PF07963 Prokaryotic N-terminal methylation motif F9277_02135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F9277_02135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F9277_02140 PF01510 N-acetylmuramoyl-L-alanine amidase F9277_02145 PF00392 Bacterial regulatory proteins, gntR family F9277_02145 PF07729 FCD domain F9277_02150 PF00456 Transketolase, thiamine diphosphate binding domain F9277_02150 PF17831 Pyruvate dehydrogenase E1 component middle domain F9277_02155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9277_02155 PF02817 e3 binding domain F9277_02155 PF00364 Biotin-requiring enzyme F9277_02160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_02160 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_02165 PF00440 Bacterial regulatory proteins, tetR family F9277_02170 PF00156 Phosphoribosyl transferase domain F9277_02175 PF00484 Carbonic anhydrase F9277_02180 PF01740 STAS domain F9277_02180 PF00916 Sulfate permease family F9277_02185 PF00005 ABC transporter F9277_02190 PF01061 ABC-2 type transporter F9277_02195 PF03279 Bacterial lipid A biosynthesis acyltransferase F9277_02200 PF02569 Pantoate-beta-alanine ligase F9277_02205 PF02548 Ketopantoate hydroxymethyltransferase F9277_02210 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F9277_02215 PF01743 Poly A polymerase head domain F9277_02215 PF12627 Probable RNA and SrmB- binding site of polymerase A F9277_02215 PF12626 Polymerase A arginine-rich C-terminus F9277_02225 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9277_02230 PF01258 Prokaryotic dksA/traR C4-type zinc finger F9277_02235 PF03749 Sugar fermentation stimulation protein RE domain F9277_02235 PF17746 SfsA N-terminal OB domain F9277_02240 PF04408 Helicase associated domain (HA2) F9277_02240 PF00271 Helicase conserved C-terminal domain F9277_02240 PF00270 DEAD/DEAH box helicase F9277_02240 PF08482 ATP-dependent helicase C-terminal F9277_02245 PF00905 Penicillin binding protein transpeptidase domain F9277_02245 PF14814 Bifunctional transglycosylase second domain F9277_02245 PF00912 Transglycosylase F9277_02250 PF01734 Patatin-like phospholipase F9277_02255 PF06434 Aconitate hydratase 2 N-terminus F9277_02255 PF11791 Aconitate B N-terminal domain F9277_02255 PF00330 Aconitase family (aconitate hydratase) F9277_02260 PF06062 Uncharacterised protein family (UPF0231) F9277_02265 PF00543 Nitrogen regulatory protein P-II F9277_02270 PF00909 Ammonium Transporter Family F9277_02275 PF13416 Bacterial extracellular solute-binding protein F9277_02285 PF00005 ABC transporter F9277_02285 PF08402 TOBE domain F9277_02290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9277_02290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9277_02290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9277_02290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9277_02295 PF06165 Glycosyltransferase family 36 F9277_02295 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain F9277_02300 PF00728 Glycosyl hydrolase family 20, catalytic domain F9277_02300 PF02838 Glycosyl hydrolase family 20, domain 2 F9277_02305 PF01869 BadF/BadG/BcrA/BcrD ATPase family F9277_02315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_02315 PF00005 ABC transporter F9277_02320 PF00005 ABC transporter F9277_02320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_02325 PF00528 Binding-protein-dependent transport system inner membrane component F9277_02325 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_02330 PF00528 Binding-protein-dependent transport system inner membrane component F9277_02335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_02340 PF00512 His Kinase A (phospho-acceptor) domain F9277_02340 PF00072 Response regulator receiver domain F9277_02340 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_02350 PF08468 Methyltransferase small domain N-terminal F9277_02350 PF05175 Methyltransferase small domain F9277_02355 PF01594 AI-2E family transporter F9277_02360 PF00202 Aminotransferase class-III F9277_02365 PF01521 Iron-sulphur cluster biosynthesis F9277_02370 PF13533 Biotin-lipoyl like F9277_02375 PF00873 AcrB/AcrD/AcrF family F9277_02380 PF01476 LysM domain F9277_02380 PF08525 Opacity-associated protein A N-terminal motif F9277_02380 PF01551 Peptidase family M23 F9277_02385 PF00579 tRNA synthetases class I (W and Y) F9277_02395 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F9277_02400 PF13609 Gram-negative porin F9277_02405 PF01272 Transcription elongation factor, GreA/GreB, C-term F9277_02405 PF03449 Transcription elongation factor, N-terminal F9277_02410 PF01985 CRS1 / YhbY (CRM) domain F9277_02415 PF01728 FtsJ-like methyltransferase F9277_02420 PF00004 ATPase family associated with various cellular activities (AAA) F9277_02420 PF06480 FtsH Extracellular F9277_02420 PF17862 AAA+ lid domain F9277_02420 PF01434 Peptidase family M41 F9277_02425 PF00809 Pterin binding enzyme F9277_02430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9277_02430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9277_02430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9277_02430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9277_02435 PF03840 Preprotein translocase SecG subunit F9277_02450 PF17384 RimP C-terminal SH3 domain F9277_02450 PF02576 RimP N-terminal domain F9277_02455 PF13184 NusA-like KH domain F9277_02455 PF08529 NusA N-terminal domain F9277_02455 PF00575 S1 RNA binding domain F9277_02460 PF04760 Translation initiation factor IF-2, N-terminal region F9277_02460 PF00009 Elongation factor Tu GTP binding domain F9277_02460 PF11987 Translation-initiation factor 2 F9277_02460 PF08364 Bacterial translation initiation factor IF-2 associated region F9277_02465 PF02033 Ribosome-binding factor A F9277_02470 PF01509 TruB family pseudouridylate synthase (N terminal domain) F9277_02470 PF09157 Pseudouridine synthase II TruB, C-terminal F9277_02470 PF16198 tRNA pseudouridylate synthase B C-terminal domain F9277_02475 PF00312 Ribosomal protein S15 F9277_02480 PF00575 S1 RNA binding domain F9277_02480 PF03725 3' exoribonuclease family, domain 2 F9277_02480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F9277_02480 PF00013 KH domain F9277_02480 PF01138 3' exoribonuclease family, domain 1 F9277_02485 PF07719 Tetratricopeptide repeat F9277_02485 PF13181 Tetratricopeptide repeat F9277_02495 PF01554 MatE F9277_02510 PF03707 Bacterial signalling protein N terminal repeat F9277_02510 PF00990 Diguanylate cyclase, GGDEF domain F9277_02510 PF00563 EAL domain F9277_02520 PF13508 Acetyltransferase (GNAT) domain F9277_02540 PF00990 Diguanylate cyclase, GGDEF domain F9277_02540 PF05230 MASE2 domain F9277_02545 PF03144 Elongation factor Tu domain 2 F9277_02545 PF00009 Elongation factor Tu GTP binding domain F9277_02545 PF16658 Class II release factor RF3, C-terminal domain F9277_02550 PF01026 TatD related DNase F9277_02555 PF01773 Na+ dependent nucleoside transporter N-terminus F9277_02555 PF07662 Na+ dependent nucleoside transporter C-terminus F9277_02555 PF07670 Nucleoside recognition F9277_02560 PF01791 DeoC/LacD family aldolase F9277_02565 PF02885 Glycosyl transferase family, helical bundle domain F9277_02565 PF00591 Glycosyl transferase family, a/b domain F9277_02565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F9277_02570 PF01676 Metalloenzyme superfamily F9277_02575 PF01048 Phosphorylase superfamily F9277_02585 PF18429 Domain of unknown function (DUF5609) F9277_02595 PF18073 Rubredoxin metal binding domain F9277_02600 PF03764 Elongation factor G, domain IV F9277_02600 PF14492 Elongation Factor G, domain II F9277_02600 PF00679 Elongation factor G C-terminus F9277_02600 PF03144 Elongation factor Tu domain 2 F9277_02600 PF00009 Elongation factor Tu GTP binding domain F9277_02605 PF03466 LysR substrate binding domain F9277_02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_02615 PF00501 AMP-binding enzyme F9277_02620 PF12833 Helix-turn-helix domain F9277_02620 PF02805 Metal binding domain of Ada F9277_02645 PF04972 BON domain F9277_02645 PF00263 Bacterial type II and III secretion system protein F9277_02645 PF13629 Pilus formation protein N terminal region F9277_02675 PF00437 Type II/IV secretion system protein F9277_02705 PF03466 LysR substrate binding domain F9277_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_02710 PF13520 Amino acid permease F9277_02715 PF04074 YhcH/YjgK/YiaL F9277_02720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F9277_02720 PF02837 Glycosyl hydrolases family 2, sugar binding domain F9277_02720 PF00703 Glycosyl hydrolases family 2 F9277_02720 PF16353 Domain of unknown function(DUF4981) F9277_02720 PF02929 Beta galactosidase small chain F9277_02725 PF00356 Bacterial regulatory proteins, lacI family F9277_02735 PF00905 Penicillin binding protein transpeptidase domain F9277_02735 PF03717 Penicillin-binding Protein dimerisation domain F9277_02740 PF16363 GDP-mannose 4,6 dehydratase F9277_02745 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F9277_02745 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F9277_02750 PF08544 GHMP kinases C terminal F9277_02750 PF00288 GHMP kinases N terminal domain F9277_02750 PF10509 Galactokinase galactose-binding signature F9277_02755 PF01263 Aldose 1-epimerase F9277_02760 PF00356 Bacterial regulatory proteins, lacI family F9277_02765 PF00367 phosphotransferase system, EIIB F9277_02765 PF02378 Phosphotransferase system, EIIC F9277_02775 PF01588 Putative tRNA binding domain F9277_02795 PF01464 Transglycosylase SLT domain F9277_02795 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F9277_02800 PF01266 FAD dependent oxidoreductase F9277_02800 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F9277_02805 PF00455 DeoR C terminal sensor domain F9277_02805 PF08220 DeoR-like helix-turn-helix domain F9277_02810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F9277_02810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F9277_02815 PF00230 Major intrinsic protein F9277_02825 PF07690 Major Facilitator Superfamily F9277_02830 PF03009 Glycerophosphoryl diester phosphodiesterase family F9277_02835 PF14602 Hexapeptide repeat of succinyl-transferase F9277_02835 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle F9277_02850 PF07130 YebG protein F9277_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_02855 PF03466 LysR substrate binding domain F9277_02865 PF11893 Domain of unknown function (DUF3413) F9277_02865 PF00884 Sulfatase F9277_02870 PF17946 RecC C-terminal domain F9277_02875 PF13361 UvrD-like helicase C-terminal domain F9277_02875 PF00580 UvrD/REP helicase N-terminal domain F9277_02875 PF12705 PD-(D/E)XK nuclease superfamily F9277_02880 PF13538 UvrD-like helicase C-terminal domain F9277_02905 PF00583 Acetyltransferase (GNAT) family F9277_02905 PF00696 Amino acid kinase family F9277_02920 PF03562 MltA specific insert domain F9277_02920 PF06725 3D domain F9277_02925 PF00899 ThiF family F9277_02930 PF02657 Fe-S metabolism associated domain F9277_02935 PF00266 Aminotransferase class-V F9277_02940 PF01965 DJ-1/PfpI family F9277_02945 PF08546 Ketopantoate reductase PanE/ApbA C terminal F9277_02945 PF02558 Ketopantoate reductase PanE/ApbA F9277_02950 PF03502 Nucleoside-specific channel-forming protein, Tsx F9277_02970 PF04545 Sigma-70, region 4 F9277_02970 PF04542 Sigma-70 region 2 F9277_02980 PF07690 Major Facilitator Superfamily F9277_02985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F9277_02995 PF05175 Methyltransferase small domain F9277_03000 PF01722 BolA-like protein F9277_03005 PF11973 NQRA C-terminal domain F9277_03005 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) F9277_03010 PF03116 NQR2, RnfD, RnfE family F9277_03015 PF04205 FMN-binding domain F9277_03020 PF02508 Rnf-Nqr subunit, membrane protein F9277_03025 PF02508 Rnf-Nqr subunit, membrane protein F9277_03030 PF00175 Oxidoreductase NAD-binding domain F9277_03030 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_03030 PF00970 Oxidoreductase FAD-binding domain F9277_03035 PF02424 ApbE family F9277_03045 PF00072 Response regulator receiver domain F9277_03045 PF00990 Diguanylate cyclase, GGDEF domain F9277_03050 PF00817 impB/mucB/samB family F9277_03050 PF11799 impB/mucB/samB family C-terminal domain F9277_03050 PF11798 IMS family HHH motif F9277_03055 PF00570 HRDC domain F9277_03055 PF00271 Helicase conserved C-terminal domain F9277_03055 PF16124 RecQ zinc-binding F9277_03055 PF09382 RQC domain F9277_03055 PF00270 DEAD/DEAH box helicase F9277_03060 PF01272 Transcription elongation factor, GreA/GreB, C-term F9277_03060 PF03449 Transcription elongation factor, N-terminal F9277_03070 PF00041 Fibronectin type III domain F9277_03070 PF00704 Glycosyl hydrolases family 18 F9277_03075 PF00209 Sodium:neurotransmitter symporter family F9277_03085 PF06786 Uncharacterised protein family (UPF0253) F9277_03095 PF03129 Anticodon binding domain F9277_03095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9277_03095 PF04073 Aminoacyl-tRNA editing domain F9277_03100 PF18389 TrmO C-terminal domain F9277_03100 PF01980 tRNA-methyltransferase O F9277_03105 PF01197 Ribosomal protein L31 F9277_03110 PF00444 Ribosomal protein L36 F9277_03115 PF03806 AbgT putative transporter family F9277_03140 PF01370 NAD dependent epimerase/dehydratase family F9277_03150 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F9277_03180 PF04287 tRNA pseudouridine synthase C F9277_03185 PF00849 RNA pseudouridylate synthase F9277_03190 PF11944 Protein of unknown function (DUF3461) F9277_03195 PF01966 HD domain F9277_03195 PF08335 GlnD PII-uridylyltransferase F9277_03195 PF01842 ACT domain F9277_03195 PF01909 Nucleotidyltransferase domain F9277_03200 PF00557 Metallopeptidase family M24 F9277_03205 PF00318 Ribosomal protein S2 F9277_03210 PF00889 Elongation factor TS F9277_03215 PF00696 Amino acid kinase family F9277_03220 PF01765 Ribosome recycling factor F9277_03225 PF01255 Putative undecaprenyl diphosphate synthase F9277_03235 PF13288 DXP reductoisomerase C-terminal domain F9277_03235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F9277_03235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F9277_03240 PF02163 Peptidase family M50 F9277_03240 PF17820 PDZ domain F9277_03245 PF07244 Surface antigen variable number repeat F9277_03245 PF01103 Surface antigen F9277_03250 PF03938 Outer membrane protein (OmpH-like) F9277_03255 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F9277_03255 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_03260 PF07977 FabA-like domain F9277_03265 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F9277_03265 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_03270 PF02684 Lipid-A-disaccharide synthetase F9277_03275 PF01351 Ribonuclease HII F9277_03280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F9277_03280 PF14579 Helix-hairpin-helix motif F9277_03280 PF02811 PHP domain F9277_03280 PF01336 OB-fold nucleic acid binding domain F9277_03280 PF07733 Bacterial DNA polymerase III alpha NTPase domain F9277_03285 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F9277_03290 PF11734 TilS substrate C-terminal domain F9277_03290 PF09179 TilS substrate binding domain F9277_03290 PF01171 PP-loop family F9277_03295 PF00034 Cytochrome c F9277_03300 PF00543 Nitrogen regulatory protein P-II F9277_03315 PF01464 Transglycosylase SLT domain F9277_03315 PF01476 LysM domain F9277_03320 PF16123 Hydroxyacylglutathione hydrolase C-terminus F9277_03325 PF08241 Methyltransferase domain F9277_03330 PF00075 RNase H F9277_03335 PF00929 Exonuclease F9277_03355 PF02770 Acyl-CoA dehydrogenase, middle domain F9277_03355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9277_03355 PF09317 Domain of unknown function (DUF1974) F9277_03355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9277_03360 PF13580 SIS domain F9277_03365 PF13230 Glutamine amidotransferases class-II F9277_03370 PF00551 Formyl transferase F9277_03380 PF02769 AIR synthase related protein, C-terminal domain F9277_03380 PF00586 AIR synthase related protein, N-terminal domain F9277_03390 PF00860 Permease family F9277_03405 PF03358 NADPH-dependent FMN reductase F9277_03410 PF03960 ArsC family F9277_03415 PF13181 Tetratricopeptide repeat F9277_03415 PF01435 Peptidase family M48 F9277_03425 PF01594 AI-2E family transporter F9277_03430 PF00578 AhpC/TSA family F9277_03435 PF01842 ACT domain F9277_03440 PF00701 Dihydrodipicolinate synthetase family F9277_03460 PF07687 Peptidase dimerisation domain F9277_03460 PF01546 Peptidase family M20/M25/M40 F9277_03465 PF03960 ArsC family F9277_03485 PF11143 Protein of unknown function (DUF2919) F9277_03490 PF04261 Dyp-type peroxidase family F9277_03495 PF12833 Helix-turn-helix domain F9277_03500 PF11975 Family 4 glycosyl hydrolase C-terminal domain F9277_03500 PF02056 Family 4 glycosyl hydrolase F9277_03510 PF07196 Flagellin hook IN motif F9277_03510 PF00669 Bacterial flagellin N-terminal helical region F9277_03510 PF00700 Bacterial flagellin C-terminal helical region F9277_03520 PF00669 Bacterial flagellin N-terminal helical region F9277_03520 PF00700 Bacterial flagellin C-terminal helical region F9277_03520 PF07196 Flagellin hook IN motif F9277_03530 PF00700 Bacterial flagellin C-terminal helical region F9277_03530 PF07196 Flagellin hook IN motif F9277_03530 PF00669 Bacterial flagellin N-terminal helical region F9277_03535 PF03646 FlaG protein F9277_03540 PF02465 Flagellar hook-associated protein 2 N-terminus F9277_03540 PF07196 Flagellin hook IN motif F9277_03540 PF07195 Flagellar hook-associated protein 2 C-terminus F9277_03550 PF02561 Flagellar protein FliS F9277_03555 PF00158 Sigma-54 interaction domain F9277_03555 PF02954 Bacterial regulatory protein, Fis family F9277_03555 PF00072 Response regulator receiver domain F9277_03560 PF00512 His Kinase A (phospho-acceptor) domain F9277_03560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_03565 PF00158 Sigma-54 interaction domain F9277_03565 PF00072 Response regulator receiver domain F9277_03565 PF02954 Bacterial regulatory protein, Fis family F9277_03570 PF02049 Flagellar hook-basal body complex protein FliE F9277_03575 PF01514 Secretory protein of YscJ/FliF family F9277_03575 PF08345 Flagellar M-ring protein C-terminal F9277_03580 PF14842 FliG N-terminal domain F9277_03580 PF14841 FliG middle domain F9277_03580 PF01706 FliG C-terminal domain F9277_03590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_03590 PF18269 T3SS EscN ATPase C-terminal domain F9277_03615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F9277_03615 PF02154 Flagellar motor switch protein FliM F9277_03620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F9277_03625 PF04347 Flagellar biosynthesis protein, FliO F9277_03630 PF00813 FliP family F9277_03635 PF01313 Bacterial export proteins, family 3 F9277_03640 PF01311 Bacterial export proteins, family 1 F9277_03645 PF01312 FlhB HrpN YscU SpaS Family F9277_03650 PF00771 FHIPEP family F9277_03655 PF00448 SRP54-type protein, GTPase domain F9277_03660 PF10609 NUBPL iron-transfer P-loop NTPase F9277_03665 PF04545 Sigma-70, region 4 F9277_03665 PF04539 Sigma-70 region 3 F9277_03665 PF04542 Sigma-70 region 2 F9277_03670 PF00072 Response regulator receiver domain F9277_03675 PF04344 Chemotaxis phosphatase, CheZ F9277_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_03680 PF07194 P2 response regulator binding domain F9277_03680 PF01627 Hpt domain F9277_03680 PF01584 CheW-like domain F9277_03680 PF02895 Signal transducing histidine kinase, homodimeric domain F9277_03685 PF01339 CheB methylesterase F9277_03685 PF00072 Response regulator receiver domain F9277_03690 PF13614 AAA domain F9277_03700 PF01584 CheW-like domain F9277_03710 PF00005 ABC transporter F9277_03715 PF03379 CcmB protein F9277_03720 PF01578 Cytochrome C assembly protein F9277_03730 PF03100 CcmE F9277_03735 PF01578 Cytochrome C assembly protein F9277_03735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F9277_03740 PF08534 Redoxin F9277_03745 PF03918 Cytochrome C biogenesis protein F9277_03750 PF03918 Cytochrome C biogenesis protein F9277_03755 PF04333 MlaA lipoprotein F9277_03760 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F9277_03765 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F9277_03775 PF08281 Sigma-70, region 4 F9277_03775 PF04542 Sigma-70 region 2 F9277_03780 PF02803 Thiolase, C-terminal domain F9277_03780 PF00108 Thiolase, N-terminal domain F9277_03785 PF00378 Enoyl-CoA hydratase/isomerase F9277_03785 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F9277_03785 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F9277_03795 PF16187 Middle or third domain of peptidase_M16 F9277_03795 PF05193 Peptidase M16 inactive domain F9277_03795 PF00675 Insulinase (Peptidase family M16) F9277_03800 PF00300 Histidine phosphatase superfamily (branch 1) F9277_03805 PF01713 Smr domain F9277_03810 PF05175 Methyltransferase small domain F9277_03815 PF01264 Chorismate synthase F9277_03820 PF03458 UPF0126 domain F9277_03825 PF04315 Elongation factor P hydroxylase F9277_03830 PF08891 YfcL protein F9277_03840 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F9277_03840 PF01266 FAD dependent oxidoreductase F9277_03845 PF02801 Beta-ketoacyl synthase, C-terminal domain F9277_03845 PF00109 Beta-ketoacyl synthase, N-terminal domain F9277_03855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_03855 PF11890 Domain of unknown function (DUF3410) F9277_03855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9277_03860 PF02774 Semialdehyde dehydrogenase, dimerisation domain F9277_03860 PF01118 Semialdehyde dehydrogenase, NAD binding domain F9277_03870 PF01416 tRNA pseudouridine synthase F9277_03880 PF01039 Carboxyl transferase domain F9277_03880 PF17848 Acetyl-coA carboxylase zinc finger domain F9277_03885 PF08245 Mur ligase middle domain F9277_03885 PF02875 Mur ligase family, glutamate ligase domain F9277_03890 PF05036 Sporulation related domain F9277_03895 PF02674 Colicin V production protein F9277_03900 PF00156 Phosphoribosyl transferase domain F9277_03905 PF03466 LysR substrate binding domain F9277_03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_03910 PF00072 Response regulator receiver domain F9277_03920 PF04304 Protein of unknown function (DUF454) F9277_03925 PF00156 Phosphoribosyl transferase domain F9277_03930 PF12169 DNA polymerase III subunits gamma and tau domain III F9277_03930 PF12170 DNA polymerase III tau subunit V interacting with alpha F9277_03935 PF02575 YbaB/EbfC DNA-binding family F9277_03940 PF13662 Toprim domain F9277_03940 PF02132 RecR protein F9277_03945 PF00230 Major intrinsic protein F9277_03955 PF01042 Endoribonuclease L-PSP F9277_03960 PF03313 Serine dehydratase alpha chain F9277_03965 PF13309 HTH domain F9277_03965 PF08348 YheO-like PAS domain F9277_03970 PF03692 Putative zinc- or iron-chelating domain F9277_03975 PF03692 Putative zinc- or iron-chelating domain F9277_03980 PF04226 Transglycosylase associated protein F9277_03985 PF05552 Conserved TM helix F9277_03985 PF00924 Mechanosensitive ion channel F9277_03990 PF03992 Antibiotic biosynthesis monooxygenase F9277_03995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_04005 PF00245 Alkaline phosphatase F9277_04010 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_04025 PF13847 Methyltransferase domain F9277_04030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_04030 PF08447 PAS fold F9277_04030 PF13426 PAS domain F9277_04035 PF01156 Inosine-uridine preferring nucleoside hydrolase F9277_04040 PF01263 Aldose 1-epimerase F9277_04045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9277_04045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9277_04050 PF01641 SelR domain F9277_04060 PF07023 Protein of unknown function (DUF1315) F9277_04065 PF00710 Asparaginase, N-terminal F9277_04065 PF17763 Glutaminase/Asparaginase C-terminal domain F9277_04070 PF01343 Peptidase family S49 F9277_04075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9277_04075 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_04080 PF00881 Nitroreductase family F9277_04085 PF01131 DNA topoisomerase F9277_04085 PF01751 Toprim domain F9277_04095 PF00106 short chain dehydrogenase F9277_04100 PF00850 Histone deacetylase domain F9277_04110 PF00884 Sulfatase F9277_04110 PF11893 Domain of unknown function (DUF3413) F9277_04115 PF07208 Protein of unknown function (DUF1414) F9277_04120 PF04245 37-kD nucleoid-associated bacterial protein F9277_04135 PF03553 Na+/H+ antiporter family F9277_04140 PF01118 Semialdehyde dehydrogenase, NAD binding domain F9277_04140 PF02774 Semialdehyde dehydrogenase, dimerisation domain F9277_04145 PF00520 Ion transport protein F9277_04145 PF00027 Cyclic nucleotide-binding domain F9277_04150 PF01914 MarC family integral membrane protein F9277_04155 PF00465 Iron-containing alcohol dehydrogenase F9277_04155 PF00171 Aldehyde dehydrogenase family F9277_04170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F9277_04170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F9277_04175 PF00462 Glutaredoxin F9277_04185 PF03553 Na+/H+ antiporter family F9277_04185 PF13726 Na+-H+ antiporter family F9277_04190 PF00929 Exonuclease F9277_04195 PF18393 MotY N-terminal domain F9277_04195 PF00691 OmpA family F9277_04200 PF10952 Protein of unknown function (DUF2753) F9277_04205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_04210 PF00730 HhH-GPD superfamily base excision DNA repair protein F9277_04210 PF10576 Iron-sulfur binding domain of endonuclease III F9277_04210 PF00633 Helix-hairpin-helix motif F9277_04215 PF02508 Rnf-Nqr subunit, membrane protein F9277_04220 PF04205 FMN-binding domain F9277_04225 PF03116 NQR2, RnfD, RnfE family F9277_04230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F9277_04230 PF12838 4Fe-4S dicluster domain F9277_04230 PF13375 RnfC Barrel sandwich hybrid domain F9277_04230 PF10531 SLBB domain F9277_04235 PF04060 Putative Fe-S cluster F9277_04240 PF02508 Rnf-Nqr subunit, membrane protein F9277_04245 PF02901 Pyruvate formate lyase-like F9277_04245 PF01228 Glycine radical F9277_04255 PF02151 UvrB/uvrC motif F9277_04255 PF17757 UvrB interaction domain F9277_04255 PF04851 Type III restriction enzyme, res subunit F9277_04255 PF00271 Helicase conserved C-terminal domain F9277_04255 PF12344 Ultra-violet resistance protein B F9277_04260 PF00072 Response regulator receiver domain F9277_04260 PF00158 Sigma-54 interaction domain F9277_04260 PF02954 Bacterial regulatory protein, Fis family F9277_04265 PF01627 Hpt domain F9277_04270 PF01933 Uncharacterised protein family UPF0052 F9277_04275 PF04055 Radical SAM superfamily F9277_04275 PF06463 Molybdenum Cofactor Synthesis C F9277_04280 PF00994 Probable molybdopterin binding domain F9277_04285 PF01967 MoaC family F9277_04290 PF02597 ThiS family F9277_04295 PF02391 MoaE protein F9277_04300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_04305 PF00528 Binding-protein-dependent transport system inner membrane component F9277_04310 PF00528 Binding-protein-dependent transport system inner membrane component F9277_04310 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_04315 PF00005 ABC transporter F9277_04315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_04320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_04320 PF00005 ABC transporter F9277_04325 PF13409 Glutathione S-transferase, N-terminal domain F9277_04330 PF13194 Domain of unknown function (DUF4010) F9277_04335 PF07085 DRTGG domain F9277_04335 PF01515 Phosphate acetyl/butaryl transferase F9277_04340 PF00871 Acetokinase family F9277_04345 PF04217 Protein of unknown function, DUF412 F9277_04360 PF02653 Branched-chain amino acid transport system / permease component F9277_04365 PF00005 ABC transporter F9277_04370 PF02903 Alpha amylase, N-terminal ig-like domain F9277_04370 PF00128 Alpha amylase, catalytic domain F9277_04375 PF00990 Diguanylate cyclase, GGDEF domain F9277_04380 PF01207 Dihydrouridine synthase (Dus) F9277_04385 PF02810 SEC-C motif F9277_04385 PF01043 SecA preprotein cross-linking domain F9277_04385 PF07517 SecA DEAD-like domain F9277_04385 PF07516 SecA Wing and Scaffold domain F9277_04390 PF02600 Disulfide bond formation protein DsbB F9277_04395 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F9277_04400 PF07840 FadR C-terminal domain F9277_04400 PF00392 Bacterial regulatory proteins, gntR family F9277_04410 PF09334 tRNA synthetases class I (M) F9277_04410 PF01588 Putative tRNA binding domain F9277_04415 PF10609 NUBPL iron-transfer P-loop NTPase F9277_04420 PF00485 Phosphoribulokinase / Uridine kinase family F9277_04430 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F9277_04430 PF12557 Cob(I)alamin adenosyltransferase N terminal F9277_04435 PF01451 Low molecular weight phosphotyrosine protein phosphatase F9277_04440 PF01740 STAS domain F9277_04440 PF00916 Sulfate permease family F9277_04450 PF12111 Polyribonucleotide phosphorylase C terminal F9277_04450 PF10150 Ribonuclease E/G family F9277_04450 PF00575 S1 RNA binding domain F9277_04455 PF00849 RNA pseudouridylate synthase F9277_04455 PF01479 S4 domain F9277_04460 PF02545 Maf-like protein F9277_04465 PF02620 Large ribosomal RNA subunit accumulation protein YceD F9277_04470 PF01783 Ribosomal L32p protein family F9277_04475 PF02504 Fatty acid synthesis protein F9277_04480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F9277_04480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F9277_04485 PF00698 Acyl transferase domain F9277_04495 PF00550 Phosphopantetheine attachment site F9277_04500 PF02801 Beta-ketoacyl synthase, C-terminal domain F9277_04500 PF00109 Beta-ketoacyl synthase, N-terminal domain F9277_04505 PF01063 Amino-transferase class IV F9277_04510 PF02618 YceG-like family F9277_04515 PF02223 Thymidylate kinase F9277_04520 PF09115 DNA polymerase III, delta subunit, C terminal F9277_04525 PF01026 TatD related DNase F9277_04530 PF00367 phosphotransferase system, EIIB F9277_04530 PF02378 Phosphotransferase system, EIIC F9277_04545 PF00209 Sodium:neurotransmitter symporter family F9277_04560 PF01734 Patatin-like phospholipase F9277_04565 PF00224 Pyruvate kinase, barrel domain F9277_04565 PF02887 Pyruvate kinase, alpha/beta domain F9277_04570 PF00480 ROK family F9277_04575 PF00072 Response regulator receiver domain F9277_04575 PF01584 CheW-like domain F9277_04580 PF14579 Helix-hairpin-helix motif F9277_04580 PF02811 PHP domain F9277_04580 PF07733 Bacterial DNA polymerase III alpha NTPase domain F9277_04580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F9277_04580 PF01336 OB-fold nucleic acid binding domain F9277_04595 PF00106 short chain dehydrogenase F9277_04600 PF08496 Peptidase family S49 N-terminal F9277_04600 PF01343 Peptidase family S49 F9277_04605 PF02224 Cytidylate kinase F9277_04610 PF00575 S1 RNA binding domain F9277_04615 PF00216 Bacterial DNA-binding protein F9277_04620 PF06305 Lipopolysaccharide assembly protein A domain F9277_04625 PF18073 Rubredoxin metal binding domain F9277_04630 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F9277_04635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_04690 PF03886 ABC-type transport auxiliary lipoprotein component F9277_04695 PF02470 MlaD protein F9277_04700 PF04403 Paraquat-inducible protein A F9277_04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_04705 PF03466 LysR substrate binding domain F9277_04715 PF02683 Cytochrome C biogenesis protein transmembrane region F9277_04715 PF11412 Disulphide bond corrector protein DsbC F9277_04720 PF00085 Thioredoxin F9277_04730 PF01938 TRAM domain F9277_04730 PF05958 tRNA (Uracil-5-)-methyltransferase F9277_04760 PF00583 Acetyltransferase (GNAT) family F9277_04765 PF00440 Bacterial regulatory proteins, tetR family F9277_04785 PF12704 MacB-like periplasmic core domain F9277_04785 PF02687 FtsX-like permease family F9277_04790 PF12704 MacB-like periplasmic core domain F9277_04790 PF02687 FtsX-like permease family F9277_04790 PF00005 ABC transporter F9277_04795 PF12704 MacB-like periplasmic core domain F9277_04795 PF02687 FtsX-like permease family F9277_04795 PF00005 ABC transporter F9277_04825 PF01717 Cobalamin-independent synthase, Catalytic domain F9277_04825 PF08267 Cobalamin-independent synthase, N-terminal domain F9277_04840 PF01047 MarR family F9277_04850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_04850 PF00529 HlyD membrane-fusion protein of T1SS F9277_04855 PF03466 LysR substrate binding domain F9277_04855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_04875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_04875 PF00512 His Kinase A (phospho-acceptor) domain F9277_04875 PF00672 HAMP domain F9277_04880 PF00486 Transcriptional regulatory protein, C terminal F9277_04880 PF00072 Response regulator receiver domain F9277_04885 PF00535 Glycosyl transferase family 2 F9277_04890 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase F9277_04900 PF00672 HAMP domain F9277_04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_04905 PF13309 HTH domain F9277_04905 PF08348 YheO-like PAS domain F9277_04910 PF01042 Endoribonuclease L-PSP F9277_04915 PF00375 Sodium:dicarboxylate symporter family F9277_04920 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_04920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_04945 PF04055 Radical SAM superfamily F9277_04945 PF11842 Domain of unknown function (DUF3362) F9277_04945 PF08497 Radical SAM N-terminal F9277_04950 PF00563 EAL domain F9277_04950 PF00498 FHA domain F9277_04950 PF00990 Diguanylate cyclase, GGDEF domain F9277_04965 PF03466 LysR substrate binding domain F9277_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_04970 PF08267 Cobalamin-independent synthase, N-terminal domain F9277_04970 PF01717 Cobalamin-independent synthase, Catalytic domain F9277_04980 PF03795 YCII-related domain F9277_04985 PF03061 Thioesterase superfamily F9277_04990 PF04279 Intracellular septation protein A F9277_05000 PF00072 Response regulator receiver domain F9277_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_05005 PF17327 Acyl homoserine lactone synthase F9277_05010 PF00375 Sodium:dicarboxylate symporter family F9277_05015 PF00290 Tryptophan synthase alpha chain F9277_05020 PF00291 Pyridoxal-phosphate dependent enzyme F9277_05025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F9277_05025 PF00218 Indole-3-glycerol phosphate synthase F9277_05030 PF02885 Glycosyl transferase family, helical bundle domain F9277_05030 PF00591 Glycosyl transferase family, a/b domain F9277_05035 PF00117 Glutamine amidotransferase class-I F9277_05040 PF04715 Anthranilate synthase component I, N terminal region F9277_05040 PF00425 chorismate binding enzyme F9277_05045 PF08056 Tryptophan operon leader peptide F9277_05050 PF02811 PHP domain F9277_05055 PF01300 Telomere recombination F9277_05065 PF01479 S4 domain F9277_05065 PF00849 RNA pseudouridylate synthase F9277_05070 PF04269 Protein of unknown function, DUF440 F9277_05075 PF09285 Elongation factor P, C-terminal F9277_05075 PF01132 Elongation factor P (EF-P) OB domain F9277_05075 PF08207 Elongation factor P (EF-P) KOW-like domain F9277_05145 PF02796 Helix-turn-helix domain of resolvase F9277_05145 PF00239 Resolvase, N terminal domain F9277_05165 PF18255 DNA processing protein A sterile alpha motif domain F9277_05165 PF02481 DNA recombination-mediator protein A F9277_05175 PF00239 Resolvase, N terminal domain F9277_05175 PF13408 Recombinase zinc beta ribbon domain F9277_05175 PF07508 Recombinase F9277_05180 PF03104 DNA polymerase family B, exonuclease domain F9277_05180 PF00136 DNA polymerase family B F9277_05185 PF00072 Response regulator receiver domain F9277_05185 PF00196 Bacterial regulatory proteins, luxR family F9277_05190 PF02151 UvrB/uvrC motif F9277_05190 PF01541 GIY-YIG catalytic domain F9277_05190 PF08459 UvrC Helix-hairpin-helix N-terminal F9277_05195 PF01066 CDP-alcohol phosphatidyltransferase F9277_05225 PF00202 Aminotransferase class-III F9277_05230 PF03435 Saccharopine dehydrogenase NADP binding domain F9277_05230 PF16653 Saccharopine dehydrogenase C-terminal domain F9277_05235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F9277_05250 PF00994 Probable molybdopterin binding domain F9277_05260 PF00268 Ribonucleotide reductase, small chain F9277_05265 PF02867 Ribonucleotide reductase, barrel domain F9277_05265 PF00317 Ribonucleotide reductase, all-alpha domain F9277_05265 PF03477 ATP cone domain F9277_05280 PF00521 DNA gyrase/topoisomerase IV, subunit A F9277_05280 PF03989 DNA gyrase C-terminal domain, beta-propeller F9277_05295 PF02335 Cytochrome c552 F9277_05305 PF13247 4Fe-4S dicluster domain F9277_05310 PF03916 Polysulphide reductase, NrfD F9277_05315 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F9277_05315 PF01578 Cytochrome C assembly protein F9277_05320 PF08534 Redoxin F9277_05325 PF03918 Cytochrome C biogenesis protein F9277_05335 PF00925 GTP cyclohydrolase II F9277_05360 PF03734 L,D-transpeptidase catalytic domain F9277_05360 PF01471 Putative peptidoglycan binding domain F9277_05365 PF05951 Bacterial protein of unknown function (DUF882) F9277_05370 PF00753 Metallo-beta-lactamase superfamily F9277_05385 PF03480 Bacterial extracellular solute-binding protein, family 7 F9277_05395 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F9277_05400 PF07730 Histidine kinase F9277_05400 PF17200 Single Cache domain 2 F9277_05405 PF00196 Bacterial regulatory proteins, luxR family F9277_05405 PF00072 Response regulator receiver domain F9277_05410 PF01047 MarR family F9277_05415 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_05420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_05420 PF00672 HAMP domain F9277_05440 PF00155 Aminotransferase class I and II F9277_05445 PF00672 HAMP domain F9277_05445 PF01966 HD domain F9277_05460 PF00155 Aminotransferase class I and II F9277_05460 PF00392 Bacterial regulatory proteins, gntR family F9277_05475 PF01336 OB-fold nucleic acid binding domain F9277_05475 PF00152 tRNA synthetases class II (D, K and N) F9277_05480 PF17200 Single Cache domain 2 F9277_05480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_05480 PF00672 HAMP domain F9277_05485 PF01242 6-pyruvoyl tetrahydropterin synthase F9277_05490 PF00072 Response regulator receiver domain F9277_05490 PF00196 Bacterial regulatory proteins, luxR family F9277_05500 PF00563 EAL domain F9277_05500 PF00990 Diguanylate cyclase, GGDEF domain F9277_05500 PF03707 Bacterial signalling protein N terminal repeat F9277_05500 PF13188 PAS domain F9277_05505 PF03313 Serine dehydratase alpha chain F9277_05505 PF03315 Serine dehydratase beta chain F9277_05510 PF03222 Tryptophan/tyrosine permease family F9277_05515 PF00293 NUDIX domain F9277_05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_05525 PF00072 Response regulator receiver domain F9277_05525 PF09308 LuxQ, periplasmic F9277_05525 PF00512 His Kinase A (phospho-acceptor) domain F9277_05530 PF00425 chorismate binding enzyme F9277_05530 PF04715 Anthranilate synthase component I, N terminal region F9277_05545 PF04317 YcjX-like family, DUF463 F9277_05550 PF05128 Domain of unknown function (DUF697) F9277_05555 PF00158 Sigma-54 interaction domain F9277_05555 PF18024 Helix-turn-helix domain F9277_05560 PF13302 Acetyltransferase (GNAT) domain F9277_05575 PF00589 Phage integrase family F9277_05575 PF13495 Phage integrase, N-terminal SAM-like domain F9277_05600 PF03691 Uncharacterised protein family (UPF0167) F9277_05765 PF00877 NlpC/P60 family F9277_05860 PF08378 Nuclease-related domain F9277_05870 PF00293 NUDIX domain F9277_05880 PF00043 Glutathione S-transferase, C-terminal domain F9277_05880 PF02798 Glutathione S-transferase, N-terminal domain F9277_05920 PF00958 GMP synthase C terminal domain F9277_05920 PF00117 Glutamine amidotransferase class-I F9277_05920 PF03352 Methyladenine glycosylase F9277_05920 PF13673 Acetyltransferase (GNAT) domain F9277_05920 PF13302 Acetyltransferase (GNAT) domain F9277_06065 PF08378 Nuclease-related domain F9277_06270 PF00293 NUDIX domain F9277_06400 PF00583 Acetyltransferase (GNAT) family F9277_06435 PF03691 Uncharacterised protein family (UPF0167) F9277_06620 PF03575 Peptidase family S51 F9277_06690 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F9277_06845 PF00958 GMP synthase C terminal domain F9277_06845 PF03352 Methyladenine glycosylase F9277_06845 PF13302 Acetyltransferase (GNAT) domain F9277_06845 PF13673 Acetyltransferase (GNAT) domain F9277_06845 PF00117 Glutamine amidotransferase class-I F9277_06890 PF01259 SAICAR synthetase F9277_06910 PF05736 OprF membrane domain F9277_06910 PF00691 OmpA family F9277_06925 PF13183 4Fe-4S dicluster domain F9277_06925 PF01565 FAD binding domain F9277_06925 PF02913 FAD linked oxidases, C-terminal domain F9277_06940 PF00221 Aromatic amino acid lyase F9277_06945 PF01175 Urocanase Rossmann-like domain F9277_06945 PF17391 Urocanase N-terminal domain F9277_06945 PF17392 Urocanase C-terminal domain F9277_06950 PF00491 Arginase family F9277_06955 PF01979 Amidohydrolase family F9277_06960 PF07702 UTRA domain F9277_06960 PF00392 Bacterial regulatory proteins, gntR family F9277_06975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9277_06975 PF03129 Anticodon binding domain F9277_06975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F9277_06975 PF02824 TGS domain F9277_06980 PF00707 Translation initiation factor IF-3, C-terminal domain F9277_06980 PF05198 Translation initiation factor IF-3, N-terminal domain F9277_06985 PF01632 Ribosomal protein L35 F9277_06990 PF00453 Ribosomal protein L20 F9277_06995 PF01042 Endoribonuclease L-PSP F9277_07000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_07005 PF01906 Putative heavy-metal-binding F9277_07040 PF00072 Response regulator receiver domain F9277_07040 PF00990 Diguanylate cyclase, GGDEF domain F9277_07045 PF01409 tRNA synthetases class II core domain (F) F9277_07045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F9277_07050 PF03147 Ferredoxin-fold anticodon binding domain F9277_07050 PF03484 tRNA synthetase B5 domain F9277_07050 PF03483 B3/4 domain F9277_07050 PF01588 Putative tRNA binding domain F9277_07050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F9277_07090 PF00216 Bacterial DNA-binding protein F9277_07100 PF05724 Thiopurine S-methyltransferase (TPMT) F9277_07105 PF02222 ATP-grasp domain F9277_07110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9277_07110 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F9277_07115 PF04172 LrgB-like family F9277_07120 PF03788 LrgA family F9277_07125 PF00929 Exonuclease F9277_07125 PF08411 Exonuclease C-terminal F9277_07140 PF13460 NAD(P)H-binding F9277_07145 PF01613 Flavin reductase like domain F9277_07150 PF02277 Phosphoribosyltransferase F9277_07155 PF02654 Cobalamin-5-phosphate synthase F9277_07160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F9277_07165 PF00300 Histidine phosphatase superfamily (branch 1) F9277_07175 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F9277_07180 PF01032 FecCD transport family F9277_07185 PF00005 ABC transporter F9277_07235 PF07690 Major Facilitator Superfamily F9277_07240 PF03466 LysR substrate binding domain F9277_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_07265 PF07963 Prokaryotic N-terminal methylation motif F9277_07265 PF08334 Type II secretion system (T2SS), protein G F9277_07270 PF01863 Protein of unknown function DUF45 F9277_07275 PF05971 RNA methyltransferase F9277_07280 PF00990 Diguanylate cyclase, GGDEF domain F9277_07280 PF00072 Response regulator receiver domain F9277_07290 PF00392 Bacterial regulatory proteins, gntR family F9277_07295 PF00171 Aldehyde dehydrogenase family F9277_07300 PF05544 Proline racemase F9277_07305 PF01266 FAD dependent oxidoreductase F9277_07315 PF02423 Ornithine cyclodeaminase/mu-crystallin family F9277_07320 PF00701 Dihydrodipicolinate synthetase family F9277_07325 PF00005 ABC transporter F9277_07325 PF08402 TOBE domain F9277_07330 PF00528 Binding-protein-dependent transport system inner membrane component F9277_07335 PF00528 Binding-protein-dependent transport system inner membrane component F9277_07345 PF01048 Phosphorylase superfamily F9277_07365 PF00529 HlyD membrane-fusion protein of T1SS F9277_07365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_07370 PF00873 AcrB/AcrD/AcrF family F9277_07380 PF00072 Response regulator receiver domain F9277_07380 PF00486 Transcriptional regulatory protein, C terminal F9277_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_07385 PF00512 His Kinase A (phospho-acceptor) domain F9277_07400 PF01752 Collagenase F9277_07400 PF08453 Peptidase family M9 N-terminal F9277_07405 PF00041 Fibronectin type III domain F9277_07405 PF12561 ToxR activated gene A lipoprotein domain F9277_07415 PF00005 ABC transporter F9277_07415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_07420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_07420 PF00005 ABC transporter F9277_07425 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_07425 PF00528 Binding-protein-dependent transport system inner membrane component F9277_07430 PF00528 Binding-protein-dependent transport system inner membrane component F9277_07435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_07440 PF07687 Peptidase dimerisation domain F9277_07440 PF01546 Peptidase family M20/M25/M40 F9277_07450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_07455 PF04209 homogentisate 1,2-dioxygenase F9277_07465 PF02798 Glutathione S-transferase, N-terminal domain F9277_07465 PF14497 Glutathione S-transferase, C-terminal domain F9277_07515 PF02796 Helix-turn-helix domain of resolvase F9277_07515 PF00239 Resolvase, N terminal domain F9277_07530 PF00589 Phage integrase family F9277_07555 PF00293 NUDIX domain F9277_07570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_07600 PF00072 Response regulator receiver domain F9277_07600 PF12431 Transcriptional regulator F9277_07605 PF17203 Single cache domain 3 F9277_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_07610 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit F9277_07615 PF00364 Biotin-requiring enzyme F9277_07615 PF00682 HMGL-like F9277_07615 PF02436 Conserved carboxylase domain F9277_07620 PF04277 Oxaloacetate decarboxylase, gamma chain F9277_07625 PF03390 2-hydroxycarboxylate transporter family F9277_07630 PF08218 Citrate lyase ligase C-terminal domain F9277_07635 PF06857 Malonate decarboxylase delta subunit (MdcD) F9277_07640 PF03328 HpcH/HpaI aldolase/citrate lyase family F9277_07645 PF04223 Citrate lyase, alpha subunit (CitF) F9277_07650 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F9277_07655 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F9277_07685 PF01590 GAF domain F9277_07685 PF02954 Bacterial regulatory protein, Fis family F9277_07685 PF00158 Sigma-54 interaction domain F9277_07690 PF00171 Aldehyde dehydrogenase family F9277_07695 PF01235 Sodium:alanine symporter family F9277_07715 PF02311 AraC-like ligand binding domain F9277_07715 PF12833 Helix-turn-helix domain F9277_07730 PF00884 Sulfatase F9277_07735 PF01406 tRNA synthetases class I (C) catalytic domain F9277_07740 PF01554 MatE F9277_07745 PF00571 CBS domain F9277_07755 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_07760 PF00583 Acetyltransferase (GNAT) family F9277_07765 PF00202 Aminotransferase class-III F9277_07770 PF06339 Ectoine synthase F9277_07775 PF00696 Amino acid kinase family F9277_07775 PF13840 ACT domain F9277_07790 PF00034 Cytochrome c F9277_07790 PF03150 Di-haem cytochrome c peroxidase F9277_07795 PF05922 Peptidase inhibitor I9 F9277_07795 PF00082 Subtilase family F9277_07795 PF04151 Bacterial pre-peptidase C-terminal domain F9277_07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_07800 PF03466 LysR substrate binding domain F9277_07805 PF05368 NmrA-like family F9277_07815 PF01810 LysE type translocator F9277_07820 PF07729 FCD domain F9277_07820 PF00392 Bacterial regulatory proteins, gntR family F9277_07860 PF00174 Oxidoreductase molybdopterin binding domain F9277_07865 PF01794 Ferric reductase like transmembrane component F9277_07875 PF07690 Major Facilitator Superfamily F9277_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_07880 PF03466 LysR substrate binding domain F9277_07885 PF00069 Protein kinase domain F9277_07885 PF08239 Bacterial SH3 domain F9277_07905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_07920 PF00989 PAS fold F9277_07920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F9277_07920 PF17203 Single cache domain 3 F9277_07925 PF00072 Response regulator receiver domain F9277_07925 PF12431 Transcriptional regulator F9277_07930 PF00593 TonB dependent receptor F9277_07930 PF07715 TonB-dependent Receptor Plug Domain F9277_07935 PF12833 Helix-turn-helix domain F9277_07940 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F9277_07940 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F9277_07945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F9277_07950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F9277_07950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9277_07955 PF00582 Universal stress protein family F9277_07965 PF04151 Bacterial pre-peptidase C-terminal domain F9277_07965 PF01752 Collagenase F9277_07965 PF08453 Peptidase family M9 N-terminal F9277_07975 PF12833 Helix-turn-helix domain F9277_07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_07980 PF03466 LysR substrate binding domain F9277_08000 PF13629 Pilus formation protein N terminal region F9277_08000 PF00263 Bacterial type II and III secretion system protein F9277_08000 PF04972 BON domain F9277_08015 PF00437 Type II/IV secretion system protein F9277_08050 PF00691 OmpA family F9277_08050 PF05736 OprF membrane domain F9277_08060 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family F9277_08070 PF00924 Mechanosensitive ion channel F9277_08075 PF03729 Short repeat of unknown function (DUF308) F9277_08085 PF01047 MarR family F9277_08100 PF01928 CYTH domain F9277_08110 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_08110 PF12464 Maltose acetyltransferase F9277_08125 PF00672 HAMP domain F9277_08125 PF00512 His Kinase A (phospho-acceptor) domain F9277_08125 PF01627 Hpt domain F9277_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_08125 PF00072 Response regulator receiver domain F9277_08125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F9277_08130 PF13188 PAS domain F9277_08130 PF00563 EAL domain F9277_08130 PF03707 Bacterial signalling protein N terminal repeat F9277_08130 PF00990 Diguanylate cyclase, GGDEF domain F9277_08135 PF05736 OprF membrane domain F9277_08135 PF00691 OmpA family F9277_08150 PF17785 PUA-like domain F9277_08150 PF10672 S-adenosylmethionine-dependent methyltransferase F9277_08155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_08155 PF00672 HAMP domain F9277_08155 PF02743 Cache domain F9277_08160 PF00708 Acylphosphatase F9277_08165 PF04358 DsrC like protein F9277_08170 PF01027 Inhibitor of apoptosis-promoting Bax1 F9277_08175 PF00005 ABC transporter F9277_08180 PF00528 Binding-protein-dependent transport system inner membrane component F9277_08185 PF00528 Binding-protein-dependent transport system inner membrane component F9277_08190 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_08200 PF14824 Sirohaem biosynthesis protein central F9277_08200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_08200 PF10414 Sirohaem synthase dimerisation region F9277_08205 PF04461 Protein of unknown function (DUF520) F9277_08210 PF00793 DAHP synthetase I family F9277_08230 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF F9277_08230 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF F9277_08230 PF01189 16S rRNA methyltransferase RsmB/F F9277_08235 PF02470 MlaD protein F9277_08240 PF04403 Paraquat-inducible protein A F9277_08245 PF00005 ABC transporter F9277_08245 PF00664 ABC transporter transmembrane region F9277_08250 PF13185 GAF domain F9277_08255 PF04352 ProQ/FINO family F9277_08255 PF17516 ProQ C-terminal domain F9277_08260 PF00595 PDZ domain F9277_08260 PF03572 Peptidase family S41 F9277_08260 PF17804 Tail specific protease N-terminal domain F9277_08260 PF11818 C-terminal domain of tail specific protease (DUF3340) F9277_08270 PF11940 Domain of unknown function (DUF3458) Ig-like fold F9277_08270 PF01433 Peptidase family M1 domain F9277_08270 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F9277_08280 PF05088 Bacterial NAD-glutamate dehydrogenase F9277_08290 PF01180 Dihydroorotate dehydrogenase F9277_08295 PF07126 Cell-division protein ZapC F9277_08300 PF10672 S-adenosylmethionine-dependent methyltransferase F9277_08300 PF02926 THUMP domain F9277_08300 PF01170 Putative RNA methylase family UPF0020 F9277_08320 PF04957 Ribosome modulation factor F9277_08325 PF07977 FabA-like domain F9277_08330 PF13654 AAA domain F9277_08330 PF05362 Lon protease (S16) C-terminal proteolytic domain F9277_08335 PF17414 MatP C-terminal ribbon-helix-helix domain F9277_08335 PF06303 MatP N-terminal domain F9277_08360 PF09308 LuxQ, periplasmic F9277_08360 PF00512 His Kinase A (phospho-acceptor) domain F9277_08360 PF00072 Response regulator receiver domain F9277_08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_08375 PF00115 Cytochrome C and Quinol oxidase polypeptide I F9277_08390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F9277_08390 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP F9277_08400 PF00403 Heavy-metal-associated domain F9277_08415 PF13545 Crp-like helix-turn-helix domain F9277_08415 PF00027 Cyclic nucleotide-binding domain F9277_08420 PF00582 Universal stress protein family F9277_08425 PF01171 PP-loop family F9277_08435 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F9277_08445 PF08402 TOBE domain F9277_08445 PF00005 ABC transporter F9277_08450 PF00528 Binding-protein-dependent transport system inner membrane component F9277_08455 PF00528 Binding-protein-dependent transport system inner membrane component F9277_08460 PF13416 Bacterial extracellular solute-binding protein F9277_08465 PF13416 Bacterial extracellular solute-binding protein F9277_08470 PF02146 Sir2 family F9277_08490 PF13247 4Fe-4S dicluster domain F9277_08495 PF00384 Molybdopterin oxidoreductase F9277_08495 PF01568 Molydopterin dinucleotide binding domain F9277_08495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9277_08505 PF02613 Nitrate reductase delta subunit F9277_08525 PF02634 FdhD/NarQ family F9277_08530 PF00005 ABC transporter F9277_08530 PF12848 ABC transporter F9277_08550 PF00512 His Kinase A (phospho-acceptor) domain F9277_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_08555 PF02954 Bacterial regulatory protein, Fis family F9277_08555 PF00072 Response regulator receiver domain F9277_08555 PF00158 Sigma-54 interaction domain F9277_08560 PF12849 PBP superfamily domain F9277_08565 PF00528 Binding-protein-dependent transport system inner membrane component F9277_08570 PF00005 ABC transporter F9277_08570 PF08402 TOBE domain F9277_08575 PF12804 MobA-like NTP transferase domain F9277_08580 PF03454 MoeA C-terminal region (domain IV) F9277_08580 PF00994 Probable molybdopterin binding domain F9277_08580 PF03453 MoeA N-terminal region (domain I and II) F9277_08590 PF00480 ROK family F9277_08640 PF00672 HAMP domain F9277_08640 PF12729 Four helix bundle sensory module for signal transduction F9277_08640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_08645 PF00877 NlpC/P60 family F9277_08690 PF18269 T3SS EscN ATPase C-terminal domain F9277_08690 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_08690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_08710 PF00813 FliP family F9277_08725 PF00486 Transcriptional regulatory protein, C terminal F9277_08755 PF01312 FlhB HrpN YscU SpaS Family F9277_08760 PF00771 FHIPEP family F9277_08830 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) F9277_08835 PF01867 CRISPR associated protein Cas1 F9277_08840 PF08798 CRISPR associated protein F9277_08845 PF09704 CRISPR-associated protein (Cas_Cas5) F9277_08865 PF00270 DEAD/DEAH box helicase F9277_08865 PF18019 HD domain F9277_08865 PF00271 Helicase conserved C-terminal domain F9277_08905 PF03606 C4-dicarboxylate anaerobic carrier F9277_08910 PF01546 Peptidase family M20/M25/M40 F9277_08910 PF07687 Peptidase dimerisation domain F9277_08930 PF00691 OmpA family F9277_08930 PF01389 OmpA-like transmembrane domain F9277_08935 PF11999 Protein of unknown function (DUF3494) F9277_08935 PF02368 Bacterial Ig-like domain (group 2) F9277_08955 PF04002 RadC-like JAB domain F9277_09010 PF00092 von Willebrand factor type A domain F9277_09025 PF17863 AAA lid domain F9277_09025 PF07726 ATPase family associated with various cellular activities (AAA) F9277_09030 PF04055 Radical SAM superfamily F9277_09030 PF13186 Iron-sulfur cluster-binding domain F9277_09035 PF00884 Sulfatase F9277_09035 PF16385 Domain of unknown function F9277_09045 PF08240 Alcohol dehydrogenase GroES-like domain F9277_09045 PF00107 Zinc-binding dehydrogenase F9277_09050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9277_09050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_09055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F9277_09055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F9277_09060 PF01116 Fructose-bisphosphate aldolase class-II F9277_09065 PF00465 Iron-containing alcohol dehydrogenase F9277_09095 PF07434 CblD like pilus biogenesis initiator F9277_09120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_09135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_09140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F9277_09155 PF04002 RadC-like JAB domain F9277_09175 PF00816 H-NS histone family F9277_09185 PF05230 MASE2 domain F9277_09185 PF00990 Diguanylate cyclase, GGDEF domain F9277_09190 PF01339 CheB methylesterase F9277_09190 PF00072 Response regulator receiver domain F9277_09205 PF00677 Lumazine binding domain F9277_09210 PF01554 MatE F9277_09220 PF01068 ATP dependent DNA ligase domain F9277_09220 PF14743 DNA ligase OB-like domain F9277_09225 PF01740 STAS domain F9277_09235 PF10531 SLBB domain F9277_09235 PF02563 Polysaccharide biosynthesis/export protein F9277_09250 PF00158 Sigma-54 interaction domain F9277_09250 PF02954 Bacterial regulatory protein, Fis family F9277_09250 PF00072 Response regulator receiver domain F9277_09260 PF00534 Glycosyl transferases group 1 F9277_09260 PF13439 Glycosyltransferase Family 4 F9277_09290 PF13439 Glycosyltransferase Family 4 F9277_09290 PF00534 Glycosyl transferases group 1 F9277_09295 PF00535 Glycosyl transferase family 2 F9277_09300 PF02397 Bacterial sugar transferase F9277_09310 PF13322 Domain of unknown function (DUF4092) F9277_09310 PF13402 Peptidase M60, enhancin and enhancin-like F9277_09310 PF17291 N-terminal domain of M60-like peptidases F9277_09330 PF05736 OprF membrane domain F9277_09330 PF00691 OmpA family F9277_09340 PF13185 GAF domain F9277_09340 PF00990 Diguanylate cyclase, GGDEF domain F9277_09345 PF06508 Queuosine biosynthesis protein QueC F9277_09350 PF04055 Radical SAM superfamily F9277_09365 PF00089 Trypsin F9277_09375 PF13193 AMP-binding enzyme C-terminal domain F9277_09375 PF00501 AMP-binding enzyme F9277_09375 PF16177 Acetyl-coenzyme A synthetase N-terminus F9277_09380 PF04303 PrpF protein F9277_09385 PF00330 Aconitase family (aconitate hydratase) F9277_09385 PF00694 Aconitase C-terminal domain F9277_09390 PF00285 Citrate synthase, C-terminal domain F9277_09410 PF04717 Type VI secretion system, phage-baseplate injector F9277_09410 PF16671 Actin cross-linking domain F9277_09465 PF17871 AAA lid domain F9277_09465 PF07724 AAA domain (Cdc48 subfamily) F9277_09465 PF00004 ATPase family associated with various cellular activities (AAA) F9277_09465 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_09500 PF00069 Protein kinase domain F9277_09500 PF03793 PASTA domain F9277_09515 PF00583 Acetyltransferase (GNAT) family F9277_09535 PF01970 Tripartite tricarboxylate transporter TctA family F9277_09540 PF01925 Sulfite exporter TauE/SafE F9277_09545 PF16868 NMT1-like family F9277_09550 PF00873 AcrB/AcrD/AcrF family F9277_09555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_09555 PF00529 HlyD membrane-fusion protein of T1SS F9277_09565 PF01810 LysE type translocator F9277_09600 PF00196 Bacterial regulatory proteins, luxR family F9277_09600 PF00072 Response regulator receiver domain F9277_09605 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F9277_09615 PF01047 MarR family F9277_09630 PF03279 Bacterial lipid A biosynthesis acyltransferase F9277_09635 PF03466 LysR substrate binding domain F9277_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_09640 PF01810 LysE type translocator F9277_09645 PF13520 Amino acid permease F9277_09650 PF00893 Small Multidrug Resistance protein F9277_09665 PF04204 Homoserine O-succinyltransferase F9277_09695 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F9277_09695 PF00270 DEAD/DEAH box helicase F9277_09695 PF04408 Helicase associated domain (HA2) F9277_09695 PF11898 Domain of unknown function (DUF3418) F9277_09695 PF00271 Helicase conserved C-terminal domain F9277_09700 PF02525 Flavodoxin-like fold F9277_09710 PF02613 Nitrate reductase delta subunit F9277_09715 PF04976 DMSO reductase anchor subunit (DmsC) F9277_09720 PF13247 4Fe-4S dicluster domain F9277_09720 PF12800 4Fe-4S binding domain F9277_09725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9277_09725 PF00384 Molybdopterin oxidoreductase F9277_09725 PF01568 Molydopterin dinucleotide binding domain F9277_09755 PF00990 Diguanylate cyclase, GGDEF domain F9277_09765 PF00012 Hsp70 protein F9277_09770 PF00012 Hsp70 protein F9277_09785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_09785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F9277_09795 PF03466 LysR substrate binding domain F9277_09795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_09805 PF07963 Prokaryotic N-terminal methylation motif F9277_09805 PF00114 Pilin (bacterial filament) F9277_09810 PF00005 ABC transporter F9277_09810 PF00664 ABC transporter transmembrane region F9277_09815 PF00664 ABC transporter transmembrane region F9277_09815 PF00005 ABC transporter F9277_09830 PF07715 TonB-dependent Receptor Plug Domain F9277_09830 PF00593 TonB dependent receptor F9277_09835 PF01032 FecCD transport family F9277_09840 PF01497 Periplasmic binding protein F9277_09845 PF00005 ABC transporter F9277_09860 PF03222 Tryptophan/tyrosine permease family F9277_09865 PF00465 Iron-containing alcohol dehydrogenase F9277_09870 PF00106 short chain dehydrogenase F9277_09875 PF01966 HD domain F9277_09885 PF03741 Integral membrane protein TerC family F9277_09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_09890 PF03466 LysR substrate binding domain F9277_09895 PF04055 Radical SAM superfamily F9277_09900 PF11230 Protein of unknown function (DUF3029) F9277_09905 PF01810 LysE type translocator F9277_09910 PF11871 Domain of unknown function (DUF3391) F9277_09910 PF01966 HD domain F9277_09915 PF03707 Bacterial signalling protein N terminal repeat F9277_09915 PF00563 EAL domain F9277_09915 PF00990 Diguanylate cyclase, GGDEF domain F9277_09920 PF00158 Sigma-54 interaction domain F9277_09920 PF00072 Response regulator receiver domain F9277_09920 PF02954 Bacterial regulatory protein, Fis family F9277_09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_09925 PF00512 His Kinase A (phospho-acceptor) domain F9277_09925 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_09930 PF00939 Sodium:sulfate symporter transmembrane region F9277_09960 PF16655 PhoD-like phosphatase, N-terminal domain F9277_09960 PF09423 PhoD-like phosphatase F9277_09975 PF04408 Helicase associated domain (HA2) F9277_09975 PF08482 ATP-dependent helicase C-terminal F9277_09975 PF00271 Helicase conserved C-terminal domain F9277_09975 PF00270 DEAD/DEAH box helicase F9277_09980 PF03949 Malic enzyme, NAD binding domain F9277_09980 PF00390 Malic enzyme, N-terminal domain F9277_09985 PF02698 DUF218 domain F9277_09990 PF00939 Sodium:sulfate symporter transmembrane region F9277_09995 PF08448 PAS fold F9277_09995 PF00990 Diguanylate cyclase, GGDEF domain F9277_10005 PF00266 Aminotransferase class-V F9277_10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_10020 PF00005 ABC transporter F9277_10020 PF00664 ABC transporter transmembrane region F9277_10025 PF00005 ABC transporter F9277_10025 PF00664 ABC transporter transmembrane region F9277_10030 PF00291 Pyridoxal-phosphate dependent enzyme F9277_10035 PF02447 GntP family permease F9277_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_10040 PF03466 LysR substrate binding domain F9277_10060 PF00990 Diguanylate cyclase, GGDEF domain F9277_10060 PF07694 5TMR of 5TMR-LYT F9277_10070 PF00266 Aminotransferase class-V F9277_10080 PF00512 His Kinase A (phospho-acceptor) domain F9277_10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_10080 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_10095 PF04993 TfoX N-terminal domain F9277_10095 PF04994 TfoX C-terminal domain F9277_10110 PF03956 Lysine exporter LysO F9277_10120 PF00282 Pyridoxal-dependent decarboxylase conserved domain F9277_10125 PF01418 Helix-turn-helix domain, rpiR family F9277_10125 PF01380 SIS domain F9277_10130 PF00465 Iron-containing alcohol dehydrogenase F9277_10135 PF00462 Glutaredoxin F9277_10140 PF06826 Predicted Permease Membrane Region F9277_10140 PF02080 TrkA-C domain F9277_10145 PF07055 Enoyl reductase FAD binding domain F9277_10145 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F9277_10145 PF12241 Trans-2-enoyl-CoA reductase catalytic region F9277_10150 PF09317 Domain of unknown function (DUF1974) F9277_10150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9277_10150 PF02770 Acyl-CoA dehydrogenase, middle domain F9277_10150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9277_10155 PF00440 Bacterial regulatory proteins, tetR family F9277_10155 PF16295 Tetracyclin repressor-like, C-terminal domain F9277_10160 PF06965 Na+/H+ antiporter 1 F9277_10175 PF00005 ABC transporter F9277_10180 PF01554 MatE F9277_10185 PF13460 NAD(P)H-binding F9277_10185 PF11066 Protein of unknown function (DUF2867) F9277_10190 PF00356 Bacterial regulatory proteins, lacI family F9277_10195 PF16874 Glycosyl hydrolase family 36 C-terminal domain F9277_10195 PF16875 Glycosyl hydrolase family 36 N-terminal domain F9277_10200 PF00474 Sodium:solute symporter family F9277_10210 PF07690 Major Facilitator Superfamily F9277_10215 PF01479 S4 domain F9277_10215 PF00849 RNA pseudouridylate synthase F9277_10220 PF04851 Type III restriction enzyme, res subunit F9277_10220 PF00271 Helicase conserved C-terminal domain F9277_10230 PF00072 Response regulator receiver domain F9277_10230 PF00486 Transcriptional regulatory protein, C terminal F9277_10235 PF16527 Two-component sensor protein CpxA, periplasmic domain F9277_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_10235 PF00512 His Kinase A (phospho-acceptor) domain F9277_10235 PF00672 HAMP domain F9277_10245 PF00535 Glycosyl transferase family 2 F9277_10245 PF02709 N-terminal domain of galactosyltransferase F9277_10250 PF01386 Ribosomal L25p family F9277_10265 PF00149 Calcineurin-like phosphoesterase F9277_10265 PF02872 5'-nucleotidase, C-terminal domain F9277_10275 PF06945 Protein of unknown function (DUF1289) F9277_10285 PF00916 Sulfate permease family F9277_10285 PF01740 STAS domain F9277_10295 PF00072 Response regulator receiver domain F9277_10295 PF00196 Bacterial regulatory proteins, luxR family F9277_10300 PF00512 His Kinase A (phospho-acceptor) domain F9277_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_10310 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_10310 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F9277_10320 PF09335 SNARE associated Golgi protein F9277_10325 PF13416 Bacterial extracellular solute-binding protein F9277_10330 PF00528 Binding-protein-dependent transport system inner membrane component F9277_10335 PF00005 ABC transporter F9277_10340 PF01066 CDP-alcohol phosphatidyltransferase F9277_10345 PF01590 GAF domain F9277_10345 PF00158 Sigma-54 interaction domain F9277_10350 PF03063 Prismane/CO dehydrogenase family F9277_10355 PF00970 Oxidoreductase FAD-binding domain F9277_10355 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_10355 PF00175 Oxidoreductase NAD-binding domain F9277_10365 PF00849 RNA pseudouridylate synthase F9277_10370 PF12729 Four helix bundle sensory module for signal transduction F9277_10370 PF00672 HAMP domain F9277_10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_10375 PF00209 Sodium:neurotransmitter symporter family F9277_10380 PF13091 PLD-like domain F9277_10380 PF13396 Phospholipase_D-nuclease N-terminal F9277_10385 PF01053 Cys/Met metabolism PLP-dependent enzyme F9277_10390 PF00561 alpha/beta hydrolase fold F9277_10395 PF03280 Proteobacterial lipase chaperone protein F9277_10400 PF03352 Methyladenine glycosylase F9277_10405 PF00873 AcrB/AcrD/AcrF family F9277_10410 PF13533 Biotin-lipoyl like F9277_10425 PF06667 Phage shock protein B F9277_10430 PF04012 PspA/IM30 family F9277_10435 PF00158 Sigma-54 interaction domain F9277_10435 PF02954 Bacterial regulatory protein, Fis family F9277_10440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_10445 PF00528 Binding-protein-dependent transport system inner membrane component F9277_10450 PF00528 Binding-protein-dependent transport system inner membrane component F9277_10450 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_10455 PF00005 ABC transporter F9277_10455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_10460 PF00005 ABC transporter F9277_10470 PF01368 DHH family F9277_10470 PF02833 DHHA2 domain F9277_10475 PF00950 ABC 3 transport family F9277_10480 PF00950 ABC 3 transport family F9277_10485 PF00005 ABC transporter F9277_10490 PF01297 Zinc-uptake complex component A periplasmic F9277_10495 PF16875 Glycosyl hydrolase family 36 N-terminal domain F9277_10495 PF16874 Glycosyl hydrolase family 36 C-terminal domain F9277_10500 PF00384 Molybdopterin oxidoreductase F9277_10500 PF18364 Molybdopterin oxidoreductase N-terminal domain F9277_10500 PF01568 Molydopterin dinucleotide binding domain F9277_10505 PF03264 NapC/NirT cytochrome c family, N-terminal region F9277_10510 PF06796 Periplasmic nitrate reductase protein NapE F9277_10515 PF03649 Uncharacterised protein family (UPF0014) F9277_10520 PF01226 Formate/nitrite transporter F9277_10545 PF02698 DUF218 domain F9277_10550 PF00265 Thymidine kinase F9277_10555 PF01406 tRNA synthetases class I (C) catalytic domain F9277_10555 PF09190 DALR domain F9277_10560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F9277_10565 PF00149 Calcineurin-like phosphoesterase F9277_10570 PF08668 HDOD domain F9277_10570 PF00563 EAL domain F9277_10575 PF02810 SEC-C motif F9277_10580 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F9277_10580 PF01502 Phosphoribosyl-AMP cyclohydrolase F9277_10585 PF00977 Histidine biosynthesis protein F9277_10590 PF00977 Histidine biosynthesis protein F9277_10595 PF00117 Glutamine amidotransferase class-I F9277_10600 PF00475 Imidazoleglycerol-phosphate dehydratase F9277_10600 PF08645 Polynucleotide kinase 3 phosphatase F9277_10605 PF00155 Aminotransferase class I and II F9277_10610 PF00815 Histidinol dehydrogenase F9277_10615 PF08029 HisG, C-terminal domain F9277_10615 PF01634 ATP phosphoribosyltransferase F9277_10620 PF02954 Bacterial regulatory protein, Fis family F9277_10620 PF00158 Sigma-54 interaction domain F9277_10620 PF00072 Response regulator receiver domain F9277_10625 PF03553 Na+/H+ antiporter family F9277_10630 PF00816 H-NS histone family F9277_10635 PF00294 pfkB family carbohydrate kinase F9277_10650 PF04356 Protein of unknown function (DUF489) F9277_10655 PF00206 Lyase F9277_10655 PF08328 Adenylosuccinate lyase C-terminal F9277_10665 PF16036 Chalcone isomerase-like F9277_10690 PF00106 short chain dehydrogenase F9277_10700 PF01435 Peptidase family M48 F9277_10715 PF08241 Methyltransferase domain F9277_10720 PF00155 Aminotransferase class I and II F9277_10725 PF06968 Biotin and Thiamin Synthesis associated domain F9277_10725 PF04055 Radical SAM superfamily F9277_10735 PF01258 Prokaryotic dksA/traR C4-type zinc finger F9277_10750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F9277_10750 PF02403 Seryl-tRNA synthetase N-terminal domain F9277_10755 PF16193 AAA C-terminal domain F9277_10755 PF00004 ATPase family associated with various cellular activities (AAA) F9277_10755 PF12002 MgsA AAA+ ATPase C terminal F9277_10760 PF03548 Outer membrane lipoprotein carrier protein LolA F9277_10765 PF09397 Ftsk gamma domain F9277_10765 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F9277_10765 PF01580 FtsK/SpoIIIE family F9277_10765 PF17854 FtsK alpha domain F9277_10770 PF01037 Lrp/AsnC ligand binding domain F9277_10775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F9277_10775 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F9277_10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_10785 PF03466 LysR substrate binding domain F9277_10795 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F9277_10810 PF04151 Bacterial pre-peptidase C-terminal domain F9277_10810 PF08453 Peptidase family M9 N-terminal F9277_10810 PF01752 Collagenase F9277_10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_10815 PF00672 HAMP domain F9277_10815 PF02743 Cache domain F9277_10820 PF03372 Endonuclease/Exonuclease/phosphatase family F9277_10835 PF00579 tRNA synthetases class I (W and Y) F9277_10840 PF00141 Peroxidase F9277_10845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9277_10845 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F9277_10860 PF00474 Sodium:solute symporter family F9277_10865 PF01081 KDPG and KHG aldolase F9277_10870 PF00294 pfkB family carbohydrate kinase F9277_10875 PF07883 Cupin domain F9277_10880 PF07940 Heparinase II/III-like protein F9277_10880 PF05426 Alginate lyase F9277_10885 PF07940 Heparinase II/III-like protein F9277_10885 PF05426 Alginate lyase F9277_10895 PF00392 Bacterial regulatory proteins, gntR family F9277_10895 PF07729 FCD domain F9277_10905 PF00392 Bacterial regulatory proteins, gntR family F9277_10905 PF07729 FCD domain F9277_10910 PF00571 CBS domain F9277_10915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F9277_10915 PF07733 Bacterial DNA polymerase III alpha NTPase domain F9277_10915 PF00929 Exonuclease F9277_10915 PF02811 PHP domain F9277_10915 PF14579 Helix-hairpin-helix motif F9277_10935 PF00474 Sodium:solute symporter family F9277_10950 PF01557 Fumarylacetoacetate (FAA) hydrolase family F9277_10960 PF03606 C4-dicarboxylate anaerobic carrier F9277_10965 PF07687 Peptidase dimerisation domain F9277_10965 PF01546 Peptidase family M20/M25/M40 F9277_10970 PF00392 Bacterial regulatory proteins, gntR family F9277_10970 PF07729 FCD domain F9277_10980 PF00873 AcrB/AcrD/AcrF family F9277_10985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_10985 PF00529 HlyD membrane-fusion protein of T1SS F9277_11000 PF02743 Cache domain F9277_11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_11000 PF00672 HAMP domain F9277_11020 PF00027 Cyclic nucleotide-binding domain F9277_11020 PF13545 Crp-like helix-turn-helix domain F9277_11025 PF00593 TonB dependent receptor F9277_11025 PF07715 TonB-dependent Receptor Plug Domain F9277_11035 PF08274 PhnA Zinc-Ribbon F9277_11035 PF03831 PhnA domain F9277_11040 PF08244 Glycosyl hydrolases family 32 C terminal F9277_11040 PF00251 Glycosyl hydrolases family 32 N-terminal domain F9277_11045 PF00294 pfkB family carbohydrate kinase F9277_11050 PF02378 Phosphotransferase system, EIIC F9277_11050 PF00367 phosphotransferase system, EIIB F9277_11055 PF00356 Bacterial regulatory proteins, lacI family F9277_11060 PF11471 Maltoporin periplasmic N-terminal extension F9277_11060 PF02264 LamB porin F9277_11065 PF02627 Carboxymuconolactone decarboxylase family F9277_11070 PF13411 MerR HTH family regulatory protein F9277_11075 PF05844 YopD protein F9277_11085 PF07720 Tetratricopeptide repeat F9277_11100 PF09621 Type III secretion system regulator (LcrR) F9277_11105 PF00771 FHIPEP family F9277_11125 PF09059 TyeA F9277_11130 PF07201 HrpJ-like domain F9277_11135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_11135 PF18269 T3SS EscN ATPase C-terminal domain F9277_11135 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_11150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F9277_11155 PF00813 FliP family F9277_11160 PF01313 Bacterial export proteins, family 3 F9277_11165 PF01311 Bacterial export proteins, family 1 F9277_11170 PF01312 FlhB HrpN YscU SpaS Family F9277_11205 PF02108 Flagellar assembly protein FliH F9277_11215 PF01514 Secretory protein of YscJ/FliF family F9277_11220 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI F9277_11235 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF F9277_11265 PF12833 Helix-turn-helix domain F9277_11290 PF06610 L-alanine exporter F9277_11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_11295 PF00512 His Kinase A (phospho-acceptor) domain F9277_11295 PF09308 LuxQ, periplasmic F9277_11295 PF00072 Response regulator receiver domain F9277_11305 PF03738 Glutathionylspermidine synthase preATP-grasp F9277_11315 PF03994 Domain of Unknown Function (DUF350) F9277_11325 PF02445 Quinolinate synthetase A protein F9277_11330 PF01238 Phosphomannose isomerase type I F9277_11335 PF13419 Haloacid dehalogenase-like hydrolase F9277_11340 PF00465 Iron-containing alcohol dehydrogenase F9277_11345 PF12833 Helix-turn-helix domain F9277_11350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_11355 PF00923 Transaldolase/Fructose-6-phosphate aldolase F9277_11360 PF01370 NAD dependent epimerase/dehydratase family F9277_11365 PF04055 Radical SAM superfamily F9277_11375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_11385 PF00381 PTS HPr component phosphorylation site F9277_11385 PF02896 PEP-utilising enzyme, TIM barrel domain F9277_11385 PF00391 PEP-utilising enzyme, mobile domain F9277_11385 PF05524 PEP-utilising enzyme, N-terminal F9277_11385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_11390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F9277_11390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_11395 PF03928 Haem-degrading F9277_11400 PF00571 CBS domain F9277_11400 PF01380 SIS domain F9277_11405 PF13174 Tetratricopeptide repeat F9277_11405 PF16331 TolA binding protein trimerisation F9277_11410 PF00691 OmpA family F9277_11415 PF04052 TolB amino-terminal domain F9277_11415 PF07676 WD40-like Beta Propeller Repeat F9277_11425 PF02472 Biopolymer transport protein ExbD/TolR F9277_11430 PF01618 MotA/TolQ/ExbB proton channel family F9277_11435 PF03061 Thioesterase superfamily F9277_11445 PF08173 Membrane bound YbgT-like protein F9277_11450 PF02322 Cytochrome bd terminal oxidase subunit II F9277_11455 PF01654 Cytochrome bd terminal oxidase subunit I F9277_11460 PF17864 RuvB AAA lid domain F9277_11460 PF05491 RuvB C-terminal winged helix domain F9277_11460 PF05496 Holliday junction DNA helicase RuvB P-loop domain F9277_11465 PF07499 RuvA, C-terminal domain F9277_11465 PF01330 RuvA N terminal domain F9277_11470 PF00672 HAMP domain F9277_11470 PF02203 Tar ligand binding domain homologue F9277_11470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_11475 PF02075 Crossover junction endodeoxyribonuclease RuvC F9277_11480 PF02938 GAD domain F9277_11480 PF00152 tRNA synthetases class II (D, K and N) F9277_11480 PF01336 OB-fold nucleic acid binding domain F9277_11485 PF01904 Protein of unknown function DUF72 F9277_11490 PF13649 Methyltransferase domain F9277_11495 PF08003 Protein of unknown function (DUF1698) F9277_11505 PF08443 RimK-like ATP-grasp domain F9277_11505 PF18030 RimK PreATP-grasp domain F9277_11515 PF18030 RimK PreATP-grasp domain F9277_11515 PF08443 RimK-like ATP-grasp domain F9277_11525 PF04310 MukB N-terminal F9277_11525 PF16330 MukB hinge domain F9277_11530 PF04288 MukE-like family F9277_11535 PF17193 MukF C-terminal domain F9277_11535 PF03882 MukF winged-helix domain F9277_11535 PF17192 MukF middle domain F9277_11545 PF02698 DUF218 domain F9277_11550 PF00486 Transcriptional regulatory protein, C terminal F9277_11550 PF00072 Response regulator receiver domain F9277_11555 PF02613 Nitrate reductase delta subunit F9277_11560 PF00356 Bacterial regulatory proteins, lacI family F9277_11565 PF04993 TfoX N-terminal domain F9277_11565 PF04994 TfoX C-terminal domain F9277_11585 PF00534 Glycosyl transferases group 1 F9277_11585 PF08323 Starch synthase catalytic domain F9277_11590 PF00483 Nucleotidyl transferase F9277_11595 PF08272 Topoisomerase I zinc-ribbon-like F9277_11595 PF01751 Toprim domain F9277_11595 PF01396 Topoisomerase DNA binding C4 zinc finger F9277_11595 PF01131 DNA topoisomerase F9277_11600 PF10692 Protein of unknown function (DUF2498) F9277_11605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F9277_11615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F9277_11620 PF04377 Arginine-tRNA-protein transferase, C terminus F9277_11620 PF04376 Arginine-tRNA-protein transferase, N terminus F9277_11625 PF01176 Translation initiation factor 1A / IF-1 F9277_11630 PF17871 AAA lid domain F9277_11630 PF00004 ATPase family associated with various cellular activities (AAA) F9277_11630 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_11630 PF07724 AAA domain (Cdc48 subfamily) F9277_11630 PF02861 Clp amino terminal domain, pathogenicity island component F9277_11635 PF02617 ATP-dependent Clp protease adaptor protein ClpS F9277_11640 PF00313 'Cold-shock' DNA-binding domain F9277_11645 PF03971 Monomeric isocitrate dehydrogenase F9277_11650 PF00849 RNA pseudouridylate synthase F9277_11655 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F9277_11665 PF13307 Helicase C-terminal domain F9277_11665 PF06733 DEAD_2 F9277_11670 PF01925 Sulfite exporter TauE/SafE F9277_11680 PF10689 Protein of unknown function (DUF2496) F9277_11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_11685 PF00672 HAMP domain F9277_11690 PF03372 Endonuclease/Exonuclease/phosphatase family F9277_11695 PF00528 Binding-protein-dependent transport system inner membrane component F9277_11700 PF00528 Binding-protein-dependent transport system inner membrane component F9277_11705 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_11710 PF00005 ABC transporter F9277_11730 PF01228 Glycine radical F9277_11730 PF02901 Pyruvate formate lyase-like F9277_11740 PF04055 Radical SAM superfamily F9277_11750 PF03887 YfbU domain F9277_11760 PF06798 PrkA serine protein kinase C-terminal domain F9277_11760 PF08298 PrkA AAA domain F9277_11765 PF04285 Protein of unknown function (DUF444) F9277_11770 PF04293 SpoVR like protein F9277_11775 PF02348 Cytidylyltransferase F9277_11780 PF03966 Trm112p-like protein F9277_11785 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F9277_11790 PF00664 ABC transporter transmembrane region F9277_11790 PF00005 ABC transporter F9277_11795 PF03772 Competence protein F9277_11795 PF00753 Metallo-beta-lactamase superfamily F9277_11805 PF12704 MacB-like periplasmic core domain F9277_11805 PF02687 FtsX-like permease family F9277_11810 PF00005 ABC transporter F9277_11815 PF02687 FtsX-like permease family F9277_11815 PF12704 MacB-like periplasmic core domain F9277_11825 PF03461 TRCF domain F9277_11825 PF00271 Helicase conserved C-terminal domain F9277_11825 PF17757 UvrB interaction domain F9277_11825 PF02559 CarD-like/TRCF domain F9277_11825 PF00270 DEAD/DEAH box helicase F9277_11840 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_11845 PF05728 Uncharacterised protein family (UPF0227) F9277_11855 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F9277_11855 PF13036 Peptidoglycan-synthase activator LpoB F9277_11870 PF01230 HIT domain F9277_11875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_11875 PF00672 HAMP domain F9277_11885 PF01048 Phosphorylase superfamily F9277_11890 PF00403 Heavy-metal-associated domain F9277_11895 PF01554 MatE F9277_11900 PF00571 CBS domain F9277_11900 PF00478 IMP dehydrogenase / GMP reductase domain F9277_11910 PF00037 4Fe-4S binding domain F9277_11910 PF11953 Domain of unknown function (DUF3470) F9277_11915 PF08032 RNA 2'-O ribose methyltransferase substrate binding F9277_11915 PF00588 SpoU rRNA Methylase family F9277_11920 PF00689 Cation transporting ATPase, C-terminus F9277_11920 PF00690 Cation transporter/ATPase, N-terminus F9277_11930 PF00990 Diguanylate cyclase, GGDEF domain F9277_11930 PF05230 MASE2 domain F9277_11940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F9277_11945 PF09619 Type III secretion system lipoprotein chaperone (YscW) F9277_11960 PF13404 AsnC-type helix-turn-helix domain F9277_11960 PF01037 Lrp/AsnC ligand binding domain F9277_11965 PF00291 Pyridoxal-phosphate dependent enzyme F9277_11985 PF00873 AcrB/AcrD/AcrF family F9277_11990 PF13533 Biotin-lipoyl like F9277_12035 PF07690 Major Facilitator Superfamily F9277_12040 PF03601 Conserved hypothetical protein 698 F9277_12055 PF03466 LysR substrate binding domain F9277_12055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_12060 PF02378 Phosphotransferase system, EIIC F9277_12060 PF00367 phosphotransferase system, EIIB F9277_12060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F9277_12065 PF13193 AMP-binding enzyme C-terminal domain F9277_12065 PF00501 AMP-binding enzyme F9277_12070 PF13378 Enolase C-terminal domain-like F9277_12075 PF00378 Enoyl-CoA hydratase/isomerase F9277_12080 PF12697 Alpha/beta hydrolase family F9277_12085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F9277_12085 PF16582 Middle domain of thiamine pyrophosphate F9277_12085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F9277_12090 PF00425 chorismate binding enzyme F9277_12095 PF00155 Aminotransferase class I and II F9277_12105 PF13286 Phosphohydrolase-associated domain F9277_12105 PF01966 HD domain F9277_12125 PF13145 PPIC-type PPIASE domain F9277_12130 PF00216 Bacterial DNA-binding protein F9277_12135 PF00004 ATPase family associated with various cellular activities (AAA) F9277_12135 PF02190 ATP-dependent protease La (LON) substrate-binding domain F9277_12135 PF05362 Lon protease (S16) C-terminal proteolytic domain F9277_12140 PF07724 AAA domain (Cdc48 subfamily) F9277_12140 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_12140 PF06689 ClpX C4-type zinc finger F9277_12145 PF00574 Clp protease F9277_12150 PF05697 Bacterial trigger factor protein (TF) F9277_12150 PF05698 Bacterial trigger factor protein (TF) C-terminus F9277_12150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_12160 PF02743 Cache domain F9277_12160 PF00512 His Kinase A (phospho-acceptor) domain F9277_12165 PF02954 Bacterial regulatory protein, Fis family F9277_12165 PF00072 Response regulator receiver domain F9277_12165 PF00158 Sigma-54 interaction domain F9277_12175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F9277_12180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F9277_12185 PF03480 Bacterial extracellular solute-binding protein, family 7 F9277_12190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F9277_12200 PF02386 Cation transport protein F9277_12205 PF02254 TrkA-N domain F9277_12205 PF02080 TrkA-C domain F9277_12210 PF00270 DEAD/DEAH box helicase F9277_12210 PF00271 Helicase conserved C-terminal domain F9277_12215 PF01595 Cyclin M transmembrane N-terminal domain F9277_12215 PF03471 Transporter associated domain F9277_12215 PF00571 CBS domain F9277_12220 PF00593 TonB dependent receptor F9277_12220 PF07715 TonB-dependent Receptor Plug Domain F9277_12235 PF00501 AMP-binding enzyme F9277_12235 PF13193 AMP-binding enzyme C-terminal domain F9277_12235 PF00975 Thioesterase domain F9277_12235 PF00550 Phosphopantetheine attachment site F9277_12235 PF00668 Condensation domain F9277_12235 PF00501 AMP-binding enzyme F9277_12235 PF13193 AMP-binding enzyme C-terminal domain F9277_12235 PF00975 Thioesterase domain F9277_12235 PF00668 Condensation domain F9277_12235 PF00550 Phosphopantetheine attachment site F9277_12240 PF00550 Phosphopantetheine attachment site F9277_12240 PF00857 Isochorismatase family F9277_12245 PF00501 AMP-binding enzyme F9277_12245 PF13193 AMP-binding enzyme C-terminal domain F9277_12250 PF00425 chorismate binding enzyme F9277_12275 PF04820 Tryptophan halogenase F9277_12300 PF00550 Phosphopantetheine attachment site F9277_12305 PF00550 Phosphopantetheine attachment site F9277_12315 PF00501 AMP-binding enzyme F9277_12315 PF13193 AMP-binding enzyme C-terminal domain F9277_12320 PF07977 FabA-like domain F9277_12325 PF00535 Glycosyl transferase family 2 F9277_12330 PF00221 Aromatic amino acid lyase F9277_12355 PF02801 Beta-ketoacyl synthase, C-terminal domain F9277_12355 PF00109 Beta-ketoacyl synthase, N-terminal domain F9277_12360 PF07977 FabA-like domain F9277_12370 PF00109 Beta-ketoacyl synthase, N-terminal domain F9277_12370 PF02801 Beta-ketoacyl synthase, C-terminal domain F9277_12385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F9277_12385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F9277_12395 PF00145 C-5 cytosine-specific DNA methylase F9277_12400 PF07670 Nucleoside recognition F9277_12400 PF07662 Na+ dependent nucleoside transporter C-terminus F9277_12400 PF01773 Na+ dependent nucleoside transporter N-terminus F9277_12405 PF03466 LysR substrate binding domain F9277_12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_12410 PF13406 Transglycosylase SLT domain F9277_12415 PF05166 YcgL domain F9277_12420 PF03775 Septum formation inhibitor MinC, C-terminal domain F9277_12420 PF05209 Septum formation inhibitor MinC, N-terminal domain F9277_12425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F9277_12430 PF03776 Septum formation topological specificity factor MinE F9277_12435 PF01612 3'-5' exonuclease F9277_12435 PF00570 HRDC domain F9277_12440 PF00501 AMP-binding enzyme F9277_12440 PF13193 AMP-binding enzyme C-terminal domain F9277_12445 PF00561 alpha/beta hydrolase fold F9277_12450 PF03843 Outer membrane lipoprotein Slp family F9277_12460 PF00814 Glycoprotease family F9277_12465 PF13307 Helicase C-terminal domain F9277_12465 PF04851 Type III restriction enzyme, res subunit F9277_12470 PF00551 Formyl transferase F9277_12470 PF01842 ACT domain F9277_12475 PF06185 YecM protein F9277_12485 PF05746 DALR anticodon binding domain F9277_12485 PF00750 tRNA synthetases class I (R) F9277_12485 PF03485 Arginyl tRNA synthetase N terminal domain F9277_12505 PF07670 Nucleoside recognition F9277_12505 PF02421 Ferrous iron transport protein B F9277_12505 PF17910 FeoB cytosolic helical domain F9277_12505 PF07664 Ferrous iron transport protein B C terminus F9277_12510 PF04023 FeoA domain F9277_12515 PF02311 AraC-like ligand binding domain F9277_12515 PF12833 Helix-turn-helix domain F9277_12520 PF01297 Zinc-uptake complex component A periplasmic F9277_12525 PF00005 ABC transporter F9277_12530 PF00950 ABC 3 transport family F9277_12535 PF00549 CoA-ligase F9277_12535 PF02629 CoA binding domain F9277_12540 PF00549 CoA-ligase F9277_12540 PF08442 ATP-grasp domain F9277_12545 PF02817 e3 binding domain F9277_12545 PF00364 Biotin-requiring enzyme F9277_12545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9277_12550 PF02779 Transketolase, pyrimidine binding domain F9277_12550 PF16078 2-oxoglutarate dehydrogenase N-terminus F9277_12550 PF00676 Dehydrogenase E1 component F9277_12550 PF16870 2-oxoglutarate dehydrogenase C-terminal F9277_12555 PF13085 2Fe-2S iron-sulfur cluster binding domain F9277_12560 PF02910 Fumarate reductase flavoprotein C-term F9277_12560 PF00890 FAD binding domain F9277_12565 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F9277_12570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F9277_12575 PF00285 Citrate synthase, C-terminal domain F9277_12580 PF01784 NIF3 (NGG1p interacting factor 3) F9277_12595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9277_12595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9277_12595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9277_12595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9277_12605 PF00561 alpha/beta hydrolase fold F9277_12615 PF00258 Flavodoxin F9277_12625 PF01475 Ferric uptake regulator family F9277_12630 PF08334 Type II secretion system (T2SS), protein G F9277_12630 PF07963 Prokaryotic N-terminal methylation motif F9277_12635 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9277_12635 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F9277_12640 PF02378 Phosphotransferase system, EIIC F9277_12640 PF00367 phosphotransferase system, EIIB F9277_12640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F9277_12650 PF01979 Amidohydrolase family F9277_12655 PF01047 MarR family F9277_12655 PF00480 ROK family F9277_12660 PF02254 TrkA-N domain F9277_12660 PF00999 Sodium/hydrogen exchanger family F9277_12665 PF00733 Asparagine synthase F9277_12665 PF13537 Glutamine amidotransferase domain F9277_12670 PF02357 Transcription termination factor nusG F9277_12675 PF00854 POT family F9277_12680 PF00762 Ferrochelatase F9277_12685 PF05191 Adenylate kinase, active site lid F9277_12690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_12690 PF00183 Hsp90 protein F9277_12695 PF00486 Transcriptional regulatory protein, C terminal F9277_12700 PF17323 Trans-membrane regulatory protein ToxS F9277_12715 PF12850 Calcineurin-like phosphoesterase superfamily domain F9277_12735 PF07556 Protein of unknown function (DUF1538) F9277_12740 PF07556 Protein of unknown function (DUF1538) F9277_12745 PF01370 NAD dependent epimerase/dehydratase family F9277_12745 PF08338 Domain of unknown function (DUF1731) F9277_12750 PF00106 short chain dehydrogenase F9277_12760 PF00085 Thioredoxin F9277_12765 PF01145 SPFH domain / Band 7 family F9277_12765 PF16200 C-terminal region of band_7 F9277_12785 PF03573 outer membrane porin, OprD family F9277_12790 PF00533 BRCA1 C Terminus (BRCT) domain F9277_12790 PF01653 NAD-dependent DNA ligase adenylation domain F9277_12790 PF03120 NAD-dependent DNA ligase OB-fold domain F9277_12790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F9277_12790 PF12826 Helix-hairpin-helix motif F9277_12795 PF04354 ZipA, C-terminal FtsZ-binding domain F9277_12805 PF00291 Pyridoxal-phosphate dependent enzyme F9277_12815 PF00381 PTS HPr component phosphorylation site F9277_12820 PF05524 PEP-utilising enzyme, N-terminal F9277_12820 PF00391 PEP-utilising enzyme, mobile domain F9277_12820 PF02896 PEP-utilising enzyme, TIM barrel domain F9277_12825 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F9277_12830 PF07196 Flagellin hook IN motif F9277_12830 PF00669 Bacterial flagellin N-terminal helical region F9277_12830 PF00700 Bacterial flagellin C-terminal helical region F9277_12835 PF00669 Bacterial flagellin N-terminal helical region F9277_12835 PF00700 Bacterial flagellin C-terminal helical region F9277_12835 PF07196 Flagellin hook IN motif F9277_12840 PF00700 Bacterial flagellin C-terminal helical region F9277_12840 PF00669 Bacterial flagellin N-terminal helical region F9277_12840 PF07196 Flagellin hook IN motif F9277_12850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_12850 PF07196 Flagellin hook IN motif F9277_12855 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F9277_12855 PF10135 Rod binding protein F9277_12860 PF02119 Flagellar P-ring protein F9277_12865 PF02107 Flagellar L-ring protein F9277_12870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_12870 PF00460 Flagella basal body rod protein F9277_12875 PF00460 Flagella basal body rod protein F9277_12875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_12885 PF07559 Flagellar basal body protein FlaE F9277_12885 PF00460 Flagella basal body rod protein F9277_12885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_12890 PF13861 FlgD Tudor-like domain F9277_12890 PF13860 FlgD Ig-like domain F9277_12890 PF03963 Flagellar hook capping protein - N-terminal region F9277_12895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_12895 PF00460 Flagella basal body rod protein F9277_12900 PF00460 Flagella basal body rod protein F9277_12905 PF01739 CheR methyltransferase, SAM binding domain F9277_12905 PF03705 CheR methyltransferase, all-alpha domain F9277_12910 PF01584 CheW-like domain F9277_12910 PF00072 Response regulator receiver domain F9277_12955 PF00691 OmpA family F9277_12955 PF01389 OmpA-like transmembrane domain F9277_12960 PF00749 tRNA synthetases class I (E and Q), catalytic domain F9277_12965 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F9277_12970 PF13609 Gram-negative porin F9277_12980 PF00403 Heavy-metal-associated domain F9277_12995 PF03173 Putative carbohydrate binding domain F9277_12995 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain F9277_12995 PF00728 Glycosyl hydrolase family 20, catalytic domain F9277_12995 PF02838 Glycosyl hydrolase family 20, domain 2 F9277_13025 PF01713 Smr domain F9277_13030 PF01479 S4 domain F9277_13030 PF00849 RNA pseudouridylate synthase F9277_13035 PF04073 Aminoacyl-tRNA editing domain F9277_13040 PF02872 5'-nucleotidase, C-terminal domain F9277_13040 PF00149 Calcineurin-like phosphoesterase F9277_13045 PF00793 DAHP synthetase I family F9277_13050 PF13369 Transglutaminase-like superfamily F9277_13055 PF04247 Invasion gene expression up-regulator, SirB F9277_13060 PF13847 Methyltransferase domain F9277_13060 PF17827 PrmC N-terminal domain F9277_13065 PF03462 PCRF domain F9277_13065 PF00472 RF-1 domain F9277_13070 PF01488 Shikimate / quinate 5-dehydrogenase F9277_13070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F9277_13070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F9277_13075 PF03550 Outer membrane lipoprotein LolB F9277_13080 PF08544 GHMP kinases C terminal F9277_13080 PF00288 GHMP kinases N terminal domain F9277_13085 PF14572 Phosphoribosyl synthetase-associated domain F9277_13085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F9277_13090 PF01195 Peptidyl-tRNA hydrolase F9277_13095 PF01926 50S ribosome-binding GTPase F9277_13095 PF06071 Protein of unknown function (DUF933) F9277_13210 PF01494 FAD binding domain F9277_13220 PF00919 Uncharacterized protein family UPF0004 F9277_13220 PF01938 TRAM domain F9277_13220 PF04055 Radical SAM superfamily F9277_13225 PF02562 PhoH-like protein F9277_13230 PF02130 Uncharacterized protein family UPF0054 F9277_13235 PF00571 CBS domain F9277_13235 PF03471 Transporter associated domain F9277_13240 PF00795 Carbon-nitrogen hydrolase F9277_13245 PF07295 Zinc-ribbon containing domain F9277_13250 PF00133 tRNA synthetases class I (I, L, M and V) F9277_13250 PF08264 Anticodon-binding domain of tRNA F9277_13250 PF13603 Leucyl-tRNA synthetase, Domain 2 F9277_13255 PF04390 Lipopolysaccharide-assembly F9277_13260 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F9277_13260 PF06144 DNA polymerase III, delta subunit F9277_13270 PF02590 Predicted SPOUT methyltransferase F9277_13275 PF03717 Penicillin-binding Protein dimerisation domain F9277_13275 PF00905 Penicillin binding protein transpeptidase domain F9277_13280 PF01098 Cell cycle protein F9277_13285 PF05036 Sporulation related domain F9277_13285 PF03330 Lytic transglycolase F9277_13290 PF07943 Penicillin-binding protein 5, C-terminal domain F9277_13290 PF00768 D-alanyl-D-alanine carboxypeptidase F9277_13295 PF04359 Protein of unknown function (DUF493) F9277_13300 PF03099 Biotin/lipoate A/B protein ligase family F9277_13305 PF04055 Radical SAM superfamily F9277_13305 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F9277_13310 PF00464 Serine hydroxymethyltransferase F9277_13315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) F9277_13315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F9277_13330 PF16657 Maltogenic Amylase, C-terminal domain F9277_13330 PF00128 Alpha amylase, catalytic domain F9277_13335 PF02378 Phosphotransferase system, EIIC F9277_13335 PF00367 phosphotransferase system, EIIB F9277_13340 PF00356 Bacterial regulatory proteins, lacI family F9277_13350 PF00005 ABC transporter F9277_13350 PF09383 NIL domain F9277_13355 PF00528 Binding-protein-dependent transport system inner membrane component F9277_13360 PF03180 NLPA lipoprotein F9277_13370 PF00149 Calcineurin-like phosphoesterase F9277_13370 PF02872 5'-nucleotidase, C-terminal domain F9277_13375 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) F9277_13380 PF07348 Syd protein (SUKH-2) F9277_13385 PF14489 QueF-like protein F9277_13385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F9277_13395 PF00990 Diguanylate cyclase, GGDEF domain F9277_13400 PF11892 Domain of unknown function (DUF3412) F9277_13400 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F9277_13400 PF03641 Possible lysine decarboxylase F9277_13405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F9277_13405 PF01367 5'-3' exonuclease, C-terminal SAM fold F9277_13410 PF01223 DNA/RNA non-specific endonuclease F9277_13415 PF18125 RlmM ferredoxin-like domain F9277_13415 PF01728 FtsJ-like methyltransferase F9277_13420 PF04241 Protein of unknown function (DUF423) F9277_13430 PF03466 LysR substrate binding domain F9277_13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_13435 PF02926 THUMP domain F9277_13435 PF02568 Thiamine biosynthesis protein (ThiI) F9277_13440 PF13677 Membrane MotB of proton-channel complex MotA/MotB F9277_13440 PF00691 OmpA family F9277_13440 PF00691 OmpA family F9277_13440 PF13677 Membrane MotB of proton-channel complex MotA/MotB F9277_13445 PF01618 MotA/TolQ/ExbB proton channel family F9277_13450 PF02609 Exonuclease VII small subunit F9277_13455 PF00348 Polyprenyl synthetase F9277_13460 PF02779 Transketolase, pyrimidine binding domain F9277_13460 PF02780 Transketolase, C-terminal domain F9277_13460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F9277_13465 PF04608 Phosphatidylglycerophosphatase A F9277_13470 PF02769 AIR synthase related protein, C-terminal domain F9277_13470 PF00586 AIR synthase related protein, N-terminal domain F9277_13475 PF01029 NusB family F9277_13480 PF00885 6,7-dimethyl-8-ribityllumazine synthase F9277_13485 PF00925 GTP cyclohydrolase II F9277_13485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F9277_13490 PF00677 Lumazine binding domain F9277_13495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9277_13495 PF01872 RibD C-terminal domain F9277_13500 PF03477 ATP cone domain F9277_13505 PF00171 Aldehyde dehydrogenase family F9277_13510 PF00696 Amino acid kinase family F9277_13510 PF01472 PUA domain F9277_13515 PF07417 Sigma factor-binding transcriptional regulator Crl F9277_13525 PF00156 Phosphoribosyl transferase domain F9277_13530 PF00860 Permease family F9277_13535 PF07687 Peptidase dimerisation domain F9277_13535 PF01546 Peptidase family M20/M25/M40 F9277_13550 PF07715 TonB-dependent Receptor Plug Domain F9277_13550 PF00593 TonB dependent receptor F9277_13565 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F9277_13565 PF02769 AIR synthase related protein, C-terminal domain F9277_13565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F9277_13575 PF01464 Transglycosylase SLT domain F9277_13575 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_13585 PF14437 MafB19-like deaminase F9277_13590 PF03806 AbgT putative transporter family F9277_13610 PF07963 Prokaryotic N-terminal methylation motif F9277_13610 PF00114 Pilin (bacterial filament) F9277_13615 PF00114 Pilin (bacterial filament) F9277_13615 PF07963 Prokaryotic N-terminal methylation motif F9277_13620 PF00684 DnaJ central domain F9277_13620 PF00226 DnaJ domain F9277_13620 PF01556 DnaJ C terminal domain F9277_13625 PF00012 Hsp70 protein F9277_13635 PF00375 Sodium:dicarboxylate symporter family F9277_13640 PF01025 GrpE F9277_13645 PF01513 ATP-NAD kinase F9277_13655 PF02463 RecF/RecN/SMC N terminal domain F9277_13660 PF04355 SmpA / OmlA family F9277_13665 PF03658 RnfH family Ubiquitin F9277_13670 PF03364 Polyketide cyclase / dehydrase and lipid transport F9277_13675 PF01668 SmpB protein F9277_13685 PF03466 LysR substrate binding domain F9277_13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_13690 PF12805 FUSC-like inner membrane protein yccS F9277_13710 PF00202 Aminotransferase class-III F9277_13720 PF02657 Fe-S metabolism associated domain F9277_13725 PF00266 Aminotransferase class-V F9277_13730 PF01458 Uncharacterized protein family (UPF0051) F9277_13735 PF00005 ABC transporter F9277_13740 PF01458 Uncharacterized protein family (UPF0051) F9277_13745 PF01521 Iron-sulphur cluster biosynthesis F9277_13750 PF01053 Cys/Met metabolism PLP-dependent enzyme F9277_13765 PF03466 LysR substrate binding domain F9277_13765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_13770 PF01266 FAD dependent oxidoreductase F9277_13775 PF01235 Sodium:alanine symporter family F9277_13780 PF01184 GPR1/FUN34/yaaH family F9277_13785 PF06483 Chitinase C F9277_13785 PF00704 Glycosyl hydrolases family 18 F9277_13790 PF03553 Na+/H+ antiporter family F9277_13795 PF00958 GMP synthase C terminal domain F9277_13795 PF00117 Glutamine amidotransferase class-I F9277_13795 PF02540 NAD synthase F9277_13800 PF00571 CBS domain F9277_13800 PF00478 IMP dehydrogenase / GMP reductase domain F9277_13805 PF13742 OB-fold nucleic acid binding domain F9277_13805 PF02601 Exonuclease VII, large subunit F9277_13815 PF00990 Diguanylate cyclase, GGDEF domain F9277_13815 PF13185 GAF domain F9277_13825 PF01926 50S ribosome-binding GTPase F9277_13825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F9277_13830 PF13360 PQQ-like domain F9277_13835 PF09976 Tetratricopeptide repeat-like domain F9277_13840 PF13393 Histidyl-tRNA synthetase F9277_13840 PF03129 Anticodon binding domain F9277_13845 PF04551 GcpE protein F9277_13850 PF13464 Domain of unknown function (DUF4115) F9277_13855 PF04055 Radical SAM superfamily F9277_13860 PF00334 Nucleoside diphosphate kinase F9277_13865 PF00883 Cytosol aminopeptidase family, catalytic domain F9277_13865 PF12404 Peptidase F9277_13870 PF04384 Iron-sulphur cluster assembly F9277_13875 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_13880 PF00012 Hsp70 protein F9277_13885 PF00226 DnaJ domain F9277_13885 PF07743 HSCB C-terminal oligomerisation domain F9277_13890 PF01521 Iron-sulphur cluster biosynthesis F9277_13895 PF01592 NifU-like N terminal domain F9277_13900 PF00266 Aminotransferase class-V F9277_13905 PF02082 Transcriptional regulator F9277_13910 PF00588 SpoU rRNA Methylase family F9277_13915 PF00459 Inositol monophosphatase family F9277_13930 PF07549 SecD/SecF GG Motif F9277_13930 PF02355 Protein export membrane protein F9277_13935 PF02355 Protein export membrane protein F9277_13935 PF13721 SecD export protein N-terminal TM region F9277_13935 PF07549 SecD/SecF GG Motif F9277_13940 PF02699 Preprotein translocase subunit F9277_13945 PF01702 Queuine tRNA-ribosyltransferase F9277_13950 PF02547 Queuosine biosynthesis protein F9277_13965 PF00571 CBS domain F9277_13970 PF00463 Isocitrate lyase family F9277_13975 PF01274 Malate synthase F9277_13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_13980 PF03466 LysR substrate binding domain F9277_13985 PF00578 AhpC/TSA family F9277_13985 PF10417 C-terminal domain of 1-Cys peroxiredoxin F9277_13990 PF03932 CutC family F9277_13995 PF03976 Polyphosphate kinase 2 (PPK2) F9277_14000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_14000 PF03466 LysR substrate binding domain F9277_14015 PF01895 PhoU domain F9277_14020 PF00005 ABC transporter F9277_14025 PF00528 Binding-protein-dependent transport system inner membrane component F9277_14030 PF00528 Binding-protein-dependent transport system inner membrane component F9277_14035 PF02503 Polyphosphate kinase middle domain F9277_14035 PF13089 Polyphosphate kinase N-terminal domain F9277_14035 PF13090 Polyphosphate kinase C-terminal domain 2 F9277_14035 PF17941 Polyphosphate kinase C-terminal domain 1 F9277_14040 PF02541 Ppx/GppA phosphatase family F9277_14045 PF12849 PBP superfamily domain F9277_14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_14050 PF11808 Phosphate regulon sensor protein PhoR F9277_14050 PF00512 His Kinase A (phospho-acceptor) domain F9277_14050 PF00989 PAS fold F9277_14055 PF00486 Transcriptional regulatory protein, C terminal F9277_14055 PF00072 Response regulator receiver domain F9277_14060 PF04381 Putative exonuclease, RdgC F9277_14070 PF00037 4Fe-4S binding domain F9277_14080 PF03411 Penicillin-insensitive murein endopeptidase F9277_14135 PF00004 ATPase family associated with various cellular activities (AAA) F9277_14135 PF02861 Clp amino terminal domain, pathogenicity island component F9277_14135 PF07724 AAA domain (Cdc48 subfamily) F9277_14135 PF17871 AAA lid domain F9277_14135 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_14145 PF00849 RNA pseudouridylate synthase F9277_14145 PF01479 S4 domain F9277_14150 PF13525 Outer membrane lipoprotein F9277_14155 PF01464 Transglycosylase SLT domain F9277_14160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F9277_14165 PF01817 Chorismate mutase type II F9277_14165 PF00800 Prephenate dehydratase F9277_14170 PF01931 Protein of unknown function DUF84 F9277_14175 PF01371 Trp repressor protein F9277_14180 PF14718 Soluble lytic murein transglycosylase L domain F9277_14180 PF01464 Transglycosylase SLT domain F9277_14185 PF00005 ABC transporter F9277_14185 PF12848 ABC transporter F9277_14190 PF07238 PilZ domain F9277_14195 PF01551 Peptidase family M23 F9277_14195 PF04225 Opacity-associated protein A LysM-like domain F9277_14200 PF01817 Chorismate mutase type II F9277_14200 PF02153 Prephenate dehydrogenase F9277_14205 PF00793 DAHP synthetase I family F9277_14210 PF00933 Glycosyl hydrolase family 3 N terminal domain F9277_14215 PF03702 Anhydro-N-acetylmuramic acid kinase F9277_14220 PF01380 SIS domain F9277_14235 PF02554 Carbon starvation protein CstA F9277_14240 PF07694 5TMR of 5TMR-LYT F9277_14240 PF06580 Histidine kinase F9277_14245 PF00072 Response regulator receiver domain F9277_14245 PF04397 LytTr DNA-binding domain F9277_14250 PF02401 LytB protein F9277_14255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_14260 PF01252 Signal peptidase (SPase) II F9277_14265 PF08264 Anticodon-binding domain of tRNA F9277_14265 PF00133 tRNA synthetases class I (I, L, M and V) F9277_14265 PF06827 Zinc finger found in FPG and IleRS F9277_14270 PF01687 Riboflavin kinase F9277_14270 PF06574 FAD synthetase F9277_14275 PF03023 Lipid II flippase MurJ F9277_14280 PF01649 Ribosomal protein S20 F9277_14285 PF01022 Bacterial regulatory protein, arsR family F9277_14290 PF03466 LysR substrate binding domain F9277_14290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_14295 PF02690 Na+/Pi-cotransporter F9277_14300 PF00303 Thymidylate synthase F9277_14305 PF01790 Prolipoprotein diacylglyceryl transferase F9277_14310 PF01925 Sulfite exporter TauE/SafE F9277_14315 PF05524 PEP-utilising enzyme, N-terminal F9277_14315 PF01590 GAF domain F9277_14315 PF00391 PEP-utilising enzyme, mobile domain F9277_14315 PF02896 PEP-utilising enzyme, TIM barrel domain F9277_14320 PF00293 NUDIX domain F9277_14325 PF02976 DNA mismatch repair enzyme MutH F9277_14335 PF00248 Aldo/keto reductase family F9277_14345 PF00072 Response regulator receiver domain F9277_14345 PF00158 Sigma-54 interaction domain F9277_14345 PF02954 Bacterial regulatory protein, Fis family F9277_14350 PF01336 OB-fold nucleic acid binding domain F9277_14350 PF00152 tRNA synthetases class II (D, K and N) F9277_14360 PF17768 RecJ OB domain F9277_14360 PF02272 DHHA1 domain F9277_14360 PF01368 DHH family F9277_14365 PF13098 Thioredoxin-like domain F9277_14365 PF10411 Disulfide bond isomerase protein N-terminus F9277_14370 PF02899 Phage integrase, N-terminal SAM-like domain F9277_14370 PF00589 Phage integrase family F9277_14375 PF00258 Flavodoxin F9277_14380 PF05525 Branched-chain amino acid transport protein F9277_14385 PF05175 Methyltransferase small domain F9277_14390 PF00270 DEAD/DEAH box helicase F9277_14390 PF00271 Helicase conserved C-terminal domain F9277_14400 PF03883 Peroxide stress protein YaaA F9277_14465 PF01844 HNH endonuclease F9277_14505 PF01235 Sodium:alanine symporter family F9277_14520 PF03167 Uracil DNA glycosylase superfamily F9277_14530 PF01261 Xylose isomerase-like TIM barrel F9277_14535 PF01228 Glycine radical F9277_14540 PF03358 NADPH-dependent FMN reductase F9277_14545 PF14821 Threonine synthase N terminus F9277_14545 PF00291 Pyridoxal-phosphate dependent enzyme F9277_14550 PF08544 GHMP kinases C terminal F9277_14550 PF00288 GHMP kinases N terminal domain F9277_14555 PF03447 Homoserine dehydrogenase, NAD binding domain F9277_14555 PF00742 Homoserine dehydrogenase F9277_14555 PF13840 ACT domain F9277_14555 PF01842 ACT domain F9277_14555 PF00696 Amino acid kinase family F9277_14565 PF03737 Aldolase/RraA F9277_14580 PF00072 Response regulator receiver domain F9277_14580 PF00486 Transcriptional regulatory protein, C terminal F9277_14590 PF18415 Histidine kinase receptor ArcB trans-membrane domain F9277_14590 PF01627 Hpt domain F9277_14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_14590 PF00072 Response regulator receiver domain F9277_14590 PF00512 His Kinase A (phospho-acceptor) domain F9277_14590 PF00989 PAS fold F9277_14600 PF00990 Diguanylate cyclase, GGDEF domain F9277_14600 PF01590 GAF domain F9277_14600 PF00563 EAL domain F9277_14600 PF00360 Phytochrome region F9277_14605 PF04055 Radical SAM superfamily F9277_14605 PF16199 Radical_SAM C-terminal domain F9277_14610 PF04898 Glutamate synthase central domain F9277_14610 PF00310 Glutamine amidotransferases class-II F9277_14610 PF01493 GXGXG motif F9277_14610 PF01645 Conserved region in glutamate synthase F9277_14615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F9277_14615 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_14620 PF01645 Conserved region in glutamate synthase F9277_14620 PF01493 GXGXG motif F9277_14620 PF00310 Glutamine amidotransferases class-II F9277_14620 PF04898 Glutamate synthase central domain F9277_14625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F9277_14625 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_14635 PF01048 Phosphorylase superfamily F9277_14645 PF01497 Periplasmic binding protein F9277_14650 PF03458 UPF0126 domain F9277_14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_14655 PF03466 LysR substrate binding domain F9277_14660 PF01925 Sulfite exporter TauE/SafE F9277_14675 PF02142 MGS-like domain F9277_14675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F9277_14675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F9277_14680 PF00117 Glutamine amidotransferase class-I F9277_14680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F9277_14685 PF05173 Dihydrodipicolinate reductase, C-terminus F9277_14685 PF01113 Dihydrodipicolinate reductase, N-terminus F9277_14690 PF00293 NUDIX domain F9277_14695 PF07516 SecA Wing and Scaffold domain F9277_14695 PF02810 SEC-C motif F9277_14695 PF01043 SecA preprotein cross-linking domain F9277_14695 PF07517 SecA DEAD-like domain F9277_14700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F9277_14705 PF12327 FtsZ family, C-terminal domain F9277_14705 PF00091 Tubulin/FtsZ family, GTPase domain F9277_14710 PF02491 SHS2 domain inserted in FTSA F9277_14715 PF08478 POTRA domain, FtsQ-type F9277_14715 PF03799 Cell division protein FtsQ F9277_14720 PF01225 Mur ligase family, catalytic domain F9277_14720 PF08245 Mur ligase middle domain F9277_14720 PF02875 Mur ligase family, glutamate ligase domain F9277_14725 PF03033 Glycosyltransferase family 28 N-terminal domain F9277_14725 PF04101 Glycosyltransferase family 28 C-terminal domain F9277_14730 PF01098 Cell cycle protein F9277_14735 PF08245 Mur ligase middle domain F9277_14735 PF02875 Mur ligase family, glutamate ligase domain F9277_14740 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F9277_14740 PF00953 Glycosyl transferase family 4 F9277_14745 PF01225 Mur ligase family, catalytic domain F9277_14745 PF02875 Mur ligase family, glutamate ligase domain F9277_14745 PF08245 Mur ligase middle domain F9277_14750 PF01225 Mur ligase family, catalytic domain F9277_14750 PF08245 Mur ligase middle domain F9277_14750 PF02875 Mur ligase family, glutamate ligase domain F9277_14755 PF00905 Penicillin binding protein transpeptidase domain F9277_14755 PF03717 Penicillin-binding Protein dimerisation domain F9277_14760 PF04999 Cell division protein FtsL F9277_14765 PF01795 MraW methylase family F9277_14780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_14785 PF04348 LppC putative lipoprotein F9277_14790 PF02021 Uncharacterised protein family UPF0102 F9277_14795 PF13580 SIS domain F9277_14800 PF04972 BON domain F9277_14805 PF04386 Stringent starvation protein B F9277_14810 PF02798 Glutathione S-transferase, N-terminal domain F9277_14810 PF00043 Glutathione S-transferase, C-terminal domain F9277_14815 PF02167 Cytochrome C1 family F9277_14820 PF00032 Cytochrome b(C-terminal)/b6/petD F9277_14820 PF00033 Cytochrome b/b6/petB F9277_14825 PF00355 Rieske [2Fe-2S] domain F9277_14825 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F9277_14830 PF00380 Ribosomal protein S9/S16 F9277_14835 PF00572 Ribosomal protein L13 F9277_14845 PF03969 AFG1-like ATPase F9277_14855 PF06295 Protein of unknown function (DUF1043) F9277_14865 PF00595 PDZ domain F9277_14870 PF13180 PDZ domain F9277_14875 PF03989 DNA gyrase C-terminal domain, beta-propeller F9277_14875 PF00521 DNA gyrase/topoisomerase IV, subunit A F9277_14880 PF00204 DNA gyrase B F9277_14880 PF00986 DNA gyrase B subunit, carboxyl terminus F9277_14880 PF01751 Toprim domain F9277_14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_14885 PF05728 Uncharacterised protein family (UPF0227) F9277_14890 PF00149 Calcineurin-like phosphoesterase F9277_14895 PF06853 Protein of unknown function (DUF1249) F9277_14900 PF00293 NUDIX domain F9277_14905 PF02321 Outer membrane efflux protein F9277_14910 PF01467 Cytidylyltransferase-like F9277_14910 PF00294 pfkB family carbohydrate kinase F9277_14915 PF08335 GlnD PII-uridylyltransferase F9277_14915 PF03710 Glutamate-ammonia ligase adenylyltransferase F9277_14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_14920 PF00672 HAMP domain F9277_14920 PF02743 Cache domain F9277_14925 PF07885 Ion channel F9277_14930 PF01928 CYTH domain F9277_14935 PF01865 Protein of unknown function DUF47 F9277_14940 PF01384 Phosphate transporter family F9277_14945 PF08239 Bacterial SH3 domain F9277_14955 PF01471 Putative peptidoglycan binding domain F9277_14955 PF13401 AAA domain F9277_14960 PF12627 Probable RNA and SrmB- binding site of polymerase A F9277_14960 PF01743 Poly A polymerase head domain F9277_14960 PF01966 HD domain F9277_14965 PF02673 Bacitracin resistance protein BacA F9277_14970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F9277_14975 PF02152 Dihydroneopterin aldolase F9277_14980 PF02660 Glycerol-3-phosphate acyltransferase F9277_14985 PF00561 alpha/beta hydrolase fold F9277_14990 PF00814 Glycoprotease family F9277_14995 PF01165 Ribosomal protein S21 F9277_15000 PF09424 Yqey-like protein F9277_15005 PF01807 CHC2 zinc finger F9277_15005 PF08278 DNA primase DnaG DnaB-binding F9277_15005 PF10410 DnaB-helicase binding domain of primase F9277_15005 PF08275 DNA primase catalytic core, N-terminal domain F9277_15010 PF04542 Sigma-70 region 2 F9277_15010 PF04546 Sigma-70, non-essential region F9277_15010 PF03979 Sigma-70 factor, region 1.1 F9277_15010 PF00140 Sigma-70 factor, region 1.2 F9277_15010 PF04545 Sigma-70, region 4 F9277_15010 PF04539 Sigma-70 region 3 F9277_15020 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) F9277_15025 PF13476 AAA domain F9277_15080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_15080 PF02378 Phosphotransferase system, EIIC F9277_15080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_15085 PF08125 Mannitol dehydrogenase C-terminal domain F9277_15085 PF01232 Mannitol dehydrogenase Rossmann domain F9277_15090 PF05068 Mannitol repressor F9277_15095 PF13419 Haloacid dehalogenase-like hydrolase F9277_15100 PF00512 His Kinase A (phospho-acceptor) domain F9277_15100 PF00672 HAMP domain F9277_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_15105 PF00486 Transcriptional regulatory protein, C terminal F9277_15105 PF00072 Response regulator receiver domain F9277_15120 PF01380 SIS domain F9277_15125 PF00455 DeoR C terminal sensor domain F9277_15125 PF08220 DeoR-like helix-turn-helix domain F9277_15135 PF00224 Pyruvate kinase, barrel domain F9277_15135 PF02887 Pyruvate kinase, alpha/beta domain F9277_15145 PF17158 Membrane-associated sensor, integral membrane domain F9277_15145 PF00990 Diguanylate cyclase, GGDEF domain F9277_15150 PF10369 Small subunit of acetolactate synthase F9277_15155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F9277_15155 PF00205 Thiamine pyrophosphate enzyme, central domain F9277_15155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F9277_15160 PF00501 AMP-binding enzyme F9277_15165 PF03466 LysR substrate binding domain F9277_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_15175 PF01569 PAP2 superfamily F9277_15190 PF00682 HMGL-like F9277_15190 PF08502 LeuA allosteric (dimerisation) domain F9277_15195 PF00180 Isocitrate/isopropylmalate dehydrogenase F9277_15200 PF00330 Aconitase family (aconitate hydratase) F9277_15205 PF00694 Aconitase C-terminal domain F9277_15215 PF00226 DnaJ domain F9277_15215 PF05099 Tellurite resistance protein TerB F9277_15220 PF04453 LPS transport system D F9277_15220 PF03968 OstA-like protein F9277_15225 PF09312 SurA N-terminal domain F9277_15230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F9277_15235 PF00398 Ribosomal RNA adenine dimethylase F9277_15240 PF04379 ApaG domain F9277_15245 PF00149 Calcineurin-like phosphoesterase F9277_15250 PF00186 Dihydrofolate reductase F9277_15255 PF12821 Threonine/Serine exporter, ThrE F9277_15260 PF06738 Putative threonine/serine exporter F9277_15265 PF01926 50S ribosome-binding GTPase F9277_15265 PF01018 GTP1/OBG F9277_15270 PF01016 Ribosomal L27 protein F9277_15275 PF00829 Ribosomal prokaryotic L21 protein F9277_15280 PF00348 Polyprenyl synthetase F9277_15290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F9277_15290 PF00056 lactate/malate dehydrogenase, NAD binding domain F9277_15295 PF02863 Arginine repressor, C-terminal domain F9277_15295 PF01316 Arginine repressor, DNA binding domain F9277_15320 PF00005 ABC transporter F9277_15325 PF00528 Binding-protein-dependent transport system inner membrane component F9277_15335 PF02441 Flavoprotein F9277_15340 PF08245 Mur ligase middle domain F9277_15340 PF02875 Mur ligase family, glutamate ligase domain F9277_15340 PF01225 Mur ligase family, catalytic domain F9277_15345 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F9277_15350 PF00719 Inorganic pyrophosphatase F9277_15360 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F9277_15365 PF04357 TamB, inner membrane protein subunit of TAM complex F9277_15370 PF17243 POTRA domain TamA domain 1 F9277_15370 PF07244 Surface antigen variable number repeat F9277_15370 PF01103 Surface antigen F9277_15375 PF01625 Peptide methionine sulfoxide reductase F9277_15385 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F9277_15390 PF10795 Protein of unknown function (DUF2607) F9277_15400 PF00005 ABC transporter F9277_15425 PF03600 Citrate transporter F9277_15425 PF02080 TrkA-C domain F9277_15430 PF00009 Elongation factor Tu GTP binding domain F9277_15435 PF01507 Phosphoadenosine phosphosulfate reductase family F9277_15440 PF10414 Sirohaem synthase dimerisation region F9277_15440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_15440 PF14824 Sirohaem biosynthesis protein central F9277_15445 PF00149 Calcineurin-like phosphoesterase F9277_15445 PF02872 5'-nucleotidase, C-terminal domain F9277_15455 PF03880 DbpA RNA binding domain F9277_15455 PF00270 DEAD/DEAH box helicase F9277_15455 PF00271 Helicase conserved C-terminal domain F9277_15460 PF13673 Acetyltransferase (GNAT) domain F9277_15475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F9277_15475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_15485 PF01196 Ribosomal protein L17 F9277_15490 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F9277_15490 PF01000 RNA polymerase Rpb3/RpoA insert domain F9277_15490 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F9277_15495 PF00163 Ribosomal protein S4/S9 N-terminal domain F9277_15495 PF01479 S4 domain F9277_15500 PF00411 Ribosomal protein S11 F9277_15505 PF00416 Ribosomal protein S13/S18 F9277_15510 PF00444 Ribosomal protein L36 F9277_15515 PF00344 SecY translocase F9277_15520 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F9277_15525 PF00327 Ribosomal protein L30p/L7e F9277_15530 PF03719 Ribosomal protein S5, C-terminal domain F9277_15530 PF00333 Ribosomal protein S5, N-terminal domain F9277_15535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F9277_15540 PF00347 Ribosomal protein L6 F9277_15545 PF00410 Ribosomal protein S8 F9277_15550 PF00253 Ribosomal protein S14p/S29e F9277_15555 PF00673 ribosomal L5P family C-terminus F9277_15555 PF00281 Ribosomal protein L5 F9277_15560 PF00467 KOW motif F9277_15560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F9277_15565 PF00238 Ribosomal protein L14p/L23e F9277_15570 PF00366 Ribosomal protein S17 F9277_15575 PF00831 Ribosomal L29 protein F9277_15580 PF00252 Ribosomal protein L16p/L10e F9277_15585 PF07650 KH domain F9277_15585 PF00189 Ribosomal protein S3, C-terminal domain F9277_15590 PF00237 Ribosomal protein L22p/L17e F9277_15595 PF00203 Ribosomal protein S19 F9277_15600 PF03947 Ribosomal Proteins L2, C-terminal domain F9277_15600 PF00181 Ribosomal Proteins L2, RNA binding domain F9277_15605 PF00276 Ribosomal protein L23 F9277_15610 PF00573 Ribosomal protein L4/L1 family F9277_15615 PF00297 Ribosomal protein L3 F9277_15620 PF00338 Ribosomal protein S10p/S20e F9277_15625 PF01197 Ribosomal protein L31 F9277_15635 PF17764 3′ DNA-binding domain (3′BD) F9277_15635 PF00270 DEAD/DEAH box helicase F9277_15635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F9277_15635 PF18074 Primosomal protein N C-terminal domain F9277_15635 PF00271 Helicase conserved C-terminal domain F9277_15640 PF00356 Bacterial regulatory proteins, lacI family F9277_15650 PF00227 Proteasome subunit F9277_15655 PF07724 AAA domain (Cdc48 subfamily) F9277_15655 PF00004 ATPase family associated with various cellular activities (AAA) F9277_15660 PF01040 UbiA prenyltransferase family F9277_15665 PF03737 Aldolase/RraA F9277_15670 PF06005 Cell division protein ZapB F9277_15675 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F9277_15680 PF00455 DeoR C terminal sensor domain F9277_15680 PF08220 DeoR-like helix-turn-helix domain F9277_15705 PF00121 Triosephosphate isomerase F9277_15710 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain F9277_15710 PF10996 Beta-Casp domain F9277_15710 PF00753 Metallo-beta-lactamase superfamily F9277_15715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F9277_15715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F9277_15715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F9277_15720 PF00953 Glycosyl transferase family 4 F9277_15725 PF01238 Phosphomannose isomerase type I F9277_15730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9277_15730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9277_15730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9277_15730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9277_15735 PF00483 Nucleotidyl transferase F9277_15735 PF01050 Mannose-6-phosphate isomerase F9277_15740 PF00535 Glycosyl transferase family 2 F9277_15745 PF13439 Glycosyltransferase Family 4 F9277_15745 PF00534 Glycosyl transferases group 1 F9277_15765 PF13439 Glycosyltransferase Family 4 F9277_15765 PF00534 Glycosyl transferases group 1 F9277_15810 PF06082 Exopolysaccharide biosynthesis protein YbjH F9277_15815 PF01370 NAD dependent epimerase/dehydratase family F9277_15820 PF03279 Bacterial lipid A biosynthesis acyltransferase F9277_15830 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F9277_15835 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F9277_15840 PF00535 Glycosyl transferase family 2 F9277_15850 PF00551 Formyl transferase F9277_15850 PF02911 Formyl transferase, C-terminal domain F9277_15865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F9277_15865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F9277_15875 PF00501 AMP-binding enzyme F9277_15875 PF13193 AMP-binding enzyme C-terminal domain F9277_15875 PF00668 Condensation domain F9277_15875 PF00975 Thioesterase domain F9277_15875 PF00550 Phosphopantetheine attachment site F9277_15880 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F9277_15885 PF00483 Nucleotidyl transferase F9277_15890 PF16363 GDP-mannose 4,6 dehydratase F9277_15900 PF01219 Prokaryotic diacylglycerol kinase F9277_15905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F9277_15910 PF00535 Glycosyl transferase family 2 F9277_15915 PF00535 Glycosyl transferase family 2 F9277_15920 PF05686 Glycosyl transferase family 90 F9277_15925 PF01467 Cytidylyltransferase-like F9277_15930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F9277_15930 PF06827 Zinc finger found in FPG and IleRS F9277_15930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F9277_15940 PF00884 Sulfatase F9277_15945 PF00471 Ribosomal protein L33 F9277_15950 PF00830 Ribosomal L28 family F9277_15955 PF04002 RadC-like JAB domain F9277_15960 PF00672 HAMP domain F9277_15960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_15960 PF17200 Single Cache domain 2 F9277_15970 PF02441 Flavoprotein F9277_15970 PF04127 DNA / pantothenate metabolism flavoprotein F9277_15975 PF00440 Bacterial regulatory proteins, tetR family F9277_15980 PF03279 Bacterial lipid A biosynthesis acyltransferase F9277_15990 PF03725 3' exoribonuclease family, domain 2 F9277_15990 PF01138 3' exoribonuclease family, domain 1 F9277_15995 PF08340 Domain of unknown function (DUF1732) F9277_15995 PF03755 YicC-like family, N-terminal region F9277_16000 PF00072 Response regulator receiver domain F9277_16000 PF00486 Transcriptional regulatory protein, C terminal F9277_16010 PF00892 EamA-like transporter family F9277_16025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_16025 PF00005 ABC transporter F9277_16030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_16030 PF00005 ABC transporter F9277_16035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_16040 PF00528 Binding-protein-dependent transport system inner membrane component F9277_16040 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_16045 PF00528 Binding-protein-dependent transport system inner membrane component F9277_16055 PF00593 TonB dependent receptor F9277_16055 PF07715 TonB-dependent Receptor Plug Domain F9277_16070 PF01618 MotA/TolQ/ExbB proton channel family F9277_16075 PF02472 Biopolymer transport protein ExbD/TolR F9277_16090 PF00625 Guanylate kinase F9277_16095 PF01192 RNA polymerase Rpb6 F9277_16100 PF02824 TGS domain F9277_16100 PF13291 ACT domain F9277_16100 PF04607 Region found in RelA / SpoT proteins F9277_16105 PF12105 SpoU, rRNA methylase, C-terminal F9277_16105 PF00588 SpoU rRNA Methylase family F9277_16110 PF00271 Helicase conserved C-terminal domain F9277_16110 PF00270 DEAD/DEAH box helicase F9277_16110 PF17191 RecG wedge domain F9277_16115 PF00326 Prolyl oligopeptidase family F9277_16120 PF00860 Permease family F9277_16125 PF00512 His Kinase A (phospho-acceptor) domain F9277_16125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_16125 PF00672 HAMP domain F9277_16130 PF00486 Transcriptional regulatory protein, C terminal F9277_16130 PF00072 Response regulator receiver domain F9277_16140 PF01272 Transcription elongation factor, GreA/GreB, C-term F9277_16140 PF03449 Transcription elongation factor, N-terminal F9277_16150 PF00575 S1 RNA binding domain F9277_16150 PF09371 Tex-like protein N-terminal domain F9277_16150 PF17674 HHH domain F9277_16150 PF16921 Tex protein YqgF-like domain F9277_16160 PF00561 alpha/beta hydrolase fold F9277_16165 PF00156 Phosphoribosyl transferase domain F9277_16170 PF01106 NifU-like domain F9277_16170 PF01521 Iron-sulphur cluster biosynthesis F9277_16175 PF00293 NUDIX domain F9277_16180 PF00459 Inositol monophosphatase family F9277_16185 PF01203 Type II secretion system (T2SS), protein N F9277_16190 PF04612 Type II secretion system (T2SS), protein M F9277_16195 PF05134 Type II secretion system (T2SS), protein L F9277_16195 PF12693 GspL periplasmic domain F9277_16200 PF03934 Type II secretion system (T2SS), protein K F9277_16205 PF07963 Prokaryotic N-terminal methylation motif F9277_16205 PF11612 Type II secretion system (T2SS), protein J F9277_16210 PF02501 Type II secretion system (T2SS), protein I F9277_16210 PF07963 Prokaryotic N-terminal methylation motif F9277_16215 PF12019 Type II transport protein GspH F9277_16220 PF07963 Prokaryotic N-terminal methylation motif F9277_16220 PF08334 Type II secretion system (T2SS), protein G F9277_16225 PF00482 Type II secretion system (T2SS), protein F F9277_16230 PF00437 Type II/IV secretion system protein F9277_16235 PF00263 Bacterial type II and III secretion system protein F9277_16235 PF03958 Bacterial type II/III secretion system short domain F9277_16240 PF11356 Type II secretion system protein C F9277_16245 PF01479 S4 domain F9277_16250 PF01430 Hsp33 protein F9277_16255 PF01293 Phosphoenolpyruvate carboxykinase F9277_16265 PF09500 Putative thioesterase (yiiD_Cterm) F9277_16265 PF00583 Acetyltransferase (GNAT) family F9277_16270 PF02580 D-Tyr-tRNA(Tyr) deacylase F9277_16275 PF03631 Virulence factor BrkB F9277_16300 PF03951 Glutamine synthetase, beta-Grasp domain F9277_16300 PF00120 Glutamine synthetase, catalytic domain F9277_16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_16310 PF00512 His Kinase A (phospho-acceptor) domain F9277_16310 PF00989 PAS fold F9277_16315 PF00072 Response regulator receiver domain F9277_16315 PF02954 Bacterial regulatory protein, Fis family F9277_16315 PF00158 Sigma-54 interaction domain F9277_16320 PF03707 Bacterial signalling protein N terminal repeat F9277_16320 PF00563 EAL domain F9277_16320 PF00990 Diguanylate cyclase, GGDEF domain F9277_16325 PF00962 Adenosine/AMP deaminase F9277_16330 PF04055 Radical SAM superfamily F9277_16330 PF06969 HemN C-terminal domain F9277_16340 PF04220 Der GTPase activator (YihI) F9277_16350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F9277_16355 PF01926 50S ribosome-binding GTPase F9277_16365 PF01612 3'-5' exonuclease F9277_16365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F9277_16365 PF01367 5'-3' exonuclease, C-terminal SAM fold F9277_16365 PF00476 DNA polymerase family A F9277_16380 PF00490 Delta-aminolevulinic acid dehydratase F9277_16385 PF01026 TatD related DNase F9277_16390 PF00902 Sec-independent protein translocase protein (TatC) F9277_16395 PF02416 mttA/Hcf106 family F9277_16400 PF02416 mttA/Hcf106 family F9277_16405 PF03109 ABC1 family F9277_16410 PF02036 SCP-2 sterol transfer family F9277_16415 PF01209 ubiE/COQ5 methyltransferase family F9277_16420 PF02646 RmuC family F9277_16430 PF00990 Diguanylate cyclase, GGDEF domain F9277_16430 PF03707 Bacterial signalling protein N terminal repeat F9277_16430 PF00563 EAL domain F9277_16445 PF10625 Universal stress protein B (UspB) F9277_16450 PF00210 Ferritin-like domain F9277_16460 PF00582 Universal stress protein family F9277_16465 PF00892 EamA-like transporter family F9277_16480 PF04445 Putative SAM-dependent methyltransferase F9277_16485 PF00563 EAL domain F9277_16485 PF08448 PAS fold F9277_16485 PF00990 Diguanylate cyclase, GGDEF domain F9277_16490 PF01037 Lrp/AsnC ligand binding domain F9277_16495 PF01432 Peptidase family M3 F9277_16505 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F9277_16515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_16515 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_16520 PF01081 KDPG and KHG aldolase F9277_16525 PF02447 GntP family permease F9277_16530 PF01202 Shikimate kinase F9277_16535 PF00920 Dehydratase family F9277_16545 PF00893 Small Multidrug Resistance protein F9277_16550 PF00893 Small Multidrug Resistance protein F9277_16555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_16555 PF03466 LysR substrate binding domain F9277_16560 PF00356 Bacterial regulatory proteins, lacI family F9277_16560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F9277_16565 PF00069 Protein kinase domain F9277_16595 PF12911 N-terminal TM domain of oligopeptide transport permease C F9277_16595 PF00528 Binding-protein-dependent transport system inner membrane component F9277_16605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_16610 PF00005 ABC transporter F9277_16610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_16650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F9277_16655 PF00580 UvrD/REP helicase N-terminal domain F9277_16655 PF13361 UvrD-like helicase C-terminal domain F9277_16660 PF00440 Bacterial regulatory proteins, tetR family F9277_16660 PF16295 Tetracyclin repressor-like, C-terminal domain F9277_16665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_16670 PF00873 AcrB/AcrD/AcrF family F9277_16680 PF04380 Membrane fusogenic activity F9277_16685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F9277_16685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F9277_16690 PF03466 LysR substrate binding domain F9277_16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_16740 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_16750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F9277_16750 PF01488 Shikimate / quinate 5-dehydrogenase F9277_16750 PF08501 Shikimate dehydrogenase substrate binding domain F9277_16755 PF01218 Coproporphyrinogen III oxidase F9277_16760 PF01300 Telomere recombination F9277_16765 PF00731 AIR carboxylase F9277_16770 PF02222 ATP-grasp domain F9277_16770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F9277_16775 PF01396 Topoisomerase DNA binding C4 zinc finger F9277_16780 PF04361 Protein of unknown function (DUF494) F9277_16785 PF02481 DNA recombination-mediator protein A F9277_16785 PF17782 DprA winged helix domain F9277_16795 PF01327 Polypeptide deformylase F9277_16800 PF00551 Formyl transferase F9277_16800 PF02911 Formyl transferase, C-terminal domain F9277_16805 PF01189 16S rRNA methyltransferase RsmB/F F9277_16805 PF01029 NusB family F9277_16810 PF02254 TrkA-N domain F9277_16810 PF02080 TrkA-C domain F9277_16815 PF02386 Cation transport protein F9277_16825 PF03006 Haemolysin-III related F9277_16830 PF07070 SpoOM protein F9277_16840 PF06288 Protein of unknown function (DUF1040) F9277_16845 PF13746 4Fe-4S dicluster domain F9277_16845 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase F9277_16845 PF12801 4Fe-4S binding domain F9277_16850 PF01636 Phosphotransferase enzyme family F9277_16855 PF01323 DSBA-like thioredoxin domain F9277_16860 PF01553 Acyltransferase F9277_16870 PF08448 PAS fold F9277_16870 PF00990 Diguanylate cyclase, GGDEF domain F9277_16875 PF01078 Magnesium chelatase, subunit ChlI F9277_16875 PF13335 Magnesium chelatase, subunit ChlI C-terminal F9277_16880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F9277_16880 PF00205 Thiamine pyrophosphate enzyme, central domain F9277_16880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F9277_16890 PF01063 Amino-transferase class IV F9277_16895 PF00920 Dehydratase family F9277_16900 PF00585 C-terminal regulatory domain of Threonine dehydratase F9277_16900 PF00291 Pyridoxal-phosphate dependent enzyme F9277_16905 PF03466 LysR substrate binding domain F9277_16905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_16910 PF07690 Major Facilitator Superfamily F9277_16915 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_16920 PF00528 Binding-protein-dependent transport system inner membrane component F9277_16925 PF12804 MobA-like NTP transferase domain F9277_16925 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_16930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F9277_16930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F9277_16935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_16935 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_16940 PF00231 ATP synthase F9277_16945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_16945 PF00306 ATP synthase alpha/beta chain, C terminal domain F9277_16945 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_16950 PF00213 ATP synthase delta (OSCP) subunit F9277_16955 PF00430 ATP synthase B/B' CF(0) F9277_16960 PF00137 ATP synthase subunit C F9277_16965 PF00119 ATP synthase A chain F9277_16970 PF03899 ATP synthase I chain F9277_16975 PF02195 ParB-like nuclease domain F9277_16975 PF17762 HTH domain found in ParB protein F9277_16980 PF13614 AAA domain F9277_16985 PF02527 rRNA small subunit methyltransferase G F9277_16990 PF01134 Glucose inhibited division protein A F9277_16990 PF13932 GidA associated domain F9277_16995 PF00258 Flavodoxin F9277_17000 PF01926 50S ribosome-binding GTPase F9277_17000 PF12631 MnmE helical domain F9277_17000 PF10396 GTP-binding protein TrmE N-terminus F9277_17005 PF02096 60Kd inner membrane protein F9277_17005 PF14849 YidC periplasmic domain F9277_17010 PF01809 Putative membrane protein insertion efficiency factor F9277_17015 PF00825 Ribonuclease P F9277_17020 PF00468 Ribosomal protein L34 F9277_17025 PF00005 ABC transporter F9277_17030 PF00528 Binding-protein-dependent transport system inner membrane component F9277_17035 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_17045 PF00308 Bacterial dnaA protein F9277_17045 PF08299 Bacterial dnaA protein helix-turn-helix F9277_17045 PF11638 DnaA N-terminal domain F9277_17050 PF02768 DNA polymerase III beta subunit, C-terminal domain F9277_17050 PF02767 DNA polymerase III beta subunit, central domain F9277_17050 PF00712 DNA polymerase III beta subunit, N-terminal domain F9277_17055 PF02463 RecF/RecN/SMC N terminal domain F9277_17060 PF18053 DNA gyrase B subunit insert domain F9277_17060 PF00204 DNA gyrase B F9277_17060 PF01751 Toprim domain F9277_17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_17060 PF00986 DNA gyrase B subunit, carboxyl terminus F9277_17065 PF00011 Hsp20/alpha crystallin family F9277_17070 PF00155 Aminotransferase class I and II F9277_17075 PF00128 Alpha amylase, catalytic domain F9277_17080 PF05746 DALR anticodon binding domain F9277_17080 PF02092 Glycyl-tRNA synthetase beta subunit F9277_17085 PF02091 Glycyl-tRNA synthetase alpha subunit F9277_17090 PF01169 Uncharacterized protein family UPF0016 F9277_17100 PF01206 Sulfurtransferase TusA F9277_17110 PF03466 LysR substrate binding domain F9277_17110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_17115 PF00107 Zinc-binding dehydrogenase F9277_17115 PF08240 Alcohol dehydrogenase GroES-like domain F9277_17120 PF00108 Thiolase, N-terminal domain F9277_17120 PF02803 Thiolase, C-terminal domain F9277_17125 PF00378 Enoyl-CoA hydratase/isomerase F9277_17125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F9277_17125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F9277_17130 PF09186 Domain of unknown function (DUF1949) F9277_17130 PF01205 Uncharacterized protein family UPF0029 F9277_17135 PF02386 Cation transport protein F9277_17140 PF12724 Flavodoxin domain F9277_17190 PF07732 Multicopper oxidase F9277_17190 PF07731 Multicopper oxidase F9277_17190 PF00394 Multicopper oxidase F9277_17195 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F9277_17200 PF13667 ThiC-associated domain F9277_17200 PF01964 Radical SAM ThiC family F9277_17205 PF02581 Thiamine monophosphate synthase F9277_17210 PF00899 ThiF family F9277_17215 PF02597 ThiS family F9277_17220 PF05690 Thiazole biosynthesis protein ThiG F9277_17225 PF04055 Radical SAM superfamily F9277_17225 PF06968 Biotin and Thiamin Synthesis associated domain F9277_17230 PF01321 Creatinase/Prolidase N-terminal domain F9277_17230 PF00557 Metallopeptidase family M24 F9277_17230 PF00557 Metallopeptidase family M24 F9277_17230 PF01321 Creatinase/Prolidase N-terminal domain F9277_17235 PF03466 LysR substrate binding domain F9277_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_17240 PF07690 Major Facilitator Superfamily F9277_17260 PF05114 Protein of unknown function (DUF692) F9277_17270 PF13361 UvrD-like helicase C-terminal domain F9277_17270 PF00580 UvrD/REP helicase N-terminal domain F9277_17285 PF01810 LysE type translocator F9277_17295 PF00892 EamA-like transporter family F9277_17300 PF09382 RQC domain F9277_17300 PF16124 RecQ zinc-binding F9277_17300 PF00271 Helicase conserved C-terminal domain F9277_17300 PF00570 HRDC domain F9277_17300 PF00270 DEAD/DEAH box helicase F9277_17315 PF02592 Putative vitamin uptake transporter F9277_17320 PF02541 Ppx/GppA phosphatase family F9277_17325 PF00270 DEAD/DEAH box helicase F9277_17325 PF00271 Helicase conserved C-terminal domain F9277_17330 PF00085 Thioredoxin F9277_17335 PF07497 Rho termination factor, RNA-binding domain F9277_17335 PF07498 Rho termination factor, N-terminal domain F9277_17335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_17345 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F9277_17350 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_17355 PF00175 Oxidoreductase NAD-binding domain F9277_17395 PF07219 HemY protein N-terminus F9277_17400 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F9277_17405 PF02602 Uroporphyrinogen-III synthase HemD F9277_17410 PF03900 Porphobilinogen deaminase, C-terminal domain F9277_17410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F9277_17415 PF01295 Adenylate cyclase, class-I F9277_17415 PF12633 Adenylate cyclase NT domain F9277_17420 PF01491 Frataxin-like domain F9277_17430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F9277_17430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F9277_17435 PF01678 Diaminopimelate epimerase F9277_17445 PF00589 Phage integrase family F9277_17445 PF02899 Phage integrase, N-terminal SAM-like domain F9277_17450 PF13419 Haloacid dehalogenase-like hydrolase F9277_17455 PF00563 EAL domain F9277_17455 PF08495 FIST N domain F9277_17455 PF10442 FIST C domain F9277_17455 PF00990 Diguanylate cyclase, GGDEF domain F9277_17480 PF12146 Serine aminopeptidase, S33 F9277_17485 PF01810 LysE type translocator F9277_17490 PF00563 EAL domain F9277_17490 PF08668 HDOD domain F9277_17495 PF01022 Bacterial regulatory protein, arsR family F9277_17500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9277_17500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9277_17525 PF10694 Protein of unknown function (DUF2500) F9277_17550 PF01914 MarC family integral membrane protein F9277_17565 PF02881 SRP54-type protein, helical bundle domain F9277_17565 PF00448 SRP54-type protein, GTPase domain F9277_17570 PF00005 ABC transporter F9277_17575 PF18075 FtsX extracellular domain F9277_17580 PF00140 Sigma-70 factor, region 1.2 F9277_17580 PF04545 Sigma-70, region 4 F9277_17580 PF04542 Sigma-70 region 2 F9277_17585 PF00581 Rhodanese-like domain F9277_17590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F9277_17590 PF01694 Rhomboid family F9277_17595 PF03748 Flagellar basal body-associated protein FliL F9277_17600 PF04345 Chorismate lyase F9277_17605 PF01040 UbiA prenyltransferase family F9277_17610 PF01553 Acyltransferase F9277_17620 PF01726 LexA DNA binding domain F9277_17620 PF00717 Peptidase S24-like F9277_17630 PF01554 MatE F9277_17635 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_17635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_17640 PF00440 Bacterial regulatory proteins, tetR family F9277_17665 PF01420 Type I restriction modification DNA specificity domain F9277_17670 PF02384 N-6 DNA Methylase F9277_17670 PF12161 HsdM N-terminal domain F9277_17675 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F9277_17675 PF04851 Type III restriction enzyme, res subunit F9277_17675 PF08463 EcoEI R protein C-terminal F9277_17675 PF00271 Helicase conserved C-terminal domain F9277_17695 PF04002 RadC-like JAB domain F9277_17710 PF06803 Protein of unknown function (DUF1232) F9277_17750 PF05958 tRNA (Uracil-5-)-methyltransferase F9277_17755 PF07715 TonB-dependent Receptor Plug Domain F9277_17755 PF00593 TonB dependent receptor F9277_17765 PF01177 Asp/Glu/Hydantoin racemase F9277_17845 PF13091 PLD-like domain F9277_17855 PF01565 FAD binding domain F9277_17855 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F9277_17860 PF08279 HTH domain F9277_17860 PF03099 Biotin/lipoate A/B protein ligase family F9277_17860 PF02237 Biotin protein ligase C terminal domain F9277_17865 PF00485 Phosphoribulokinase / Uridine kinase family F9277_17895 PF00009 Elongation factor Tu GTP binding domain F9277_17895 PF03144 Elongation factor Tu domain 2 F9277_17895 PF03143 Elongation factor Tu C-terminal domain F9277_17905 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F9277_17910 PF02357 Transcription termination factor nusG F9277_17910 PF00467 KOW motif F9277_17915 PF00298 Ribosomal protein L11, RNA binding domain F9277_17915 PF03946 Ribosomal protein L11, N-terminal domain F9277_17920 PF00687 Ribosomal protein L1p/L10e family F9277_17925 PF00466 Ribosomal protein L10 F9277_17930 PF16320 Ribosomal protein L7/L12 dimerisation domain F9277_17930 PF00542 Ribosomal protein L7/L12 C-terminal domain F9277_17935 PF04560 RNA polymerase Rpb2, domain 7 F9277_17935 PF04563 RNA polymerase beta subunit F9277_17935 PF00562 RNA polymerase Rpb2, domain 6 F9277_17935 PF04561 RNA polymerase Rpb2, domain 2 F9277_17935 PF04565 RNA polymerase Rpb2, domain 3 F9277_17935 PF10385 RNA polymerase beta subunit external 1 domain F9277_17940 PF04983 RNA polymerase Rpb1, domain 3 F9277_17940 PF04998 RNA polymerase Rpb1, domain 5 F9277_17940 PF05000 RNA polymerase Rpb1, domain 4 F9277_17940 PF04997 RNA polymerase Rpb1, domain 1 F9277_17940 PF00623 RNA polymerase Rpb1, domain 2 F9277_17945 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F9277_17950 PF09297 NADH pyrophosphatase zinc ribbon domain F9277_17950 PF00293 NUDIX domain F9277_17965 PF01208 Uroporphyrinogen decarboxylase (URO-D) F9277_17970 PF03167 Uracil DNA glycosylase superfamily F9277_17975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_17980 PF04222 Protein of unknown function (DUF416) F9277_17985 PF00571 CBS domain F9277_17985 PF01595 Cyclin M transmembrane N-terminal domain F9277_17990 PF00216 Bacterial DNA-binding protein F9277_18000 PF02844 Phosphoribosylglycinamide synthetase, N domain F9277_18000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F9277_18000 PF02843 Phosphoribosylglycinamide synthetase, C domain F9277_18005 PF02142 MGS-like domain F9277_18005 PF01808 AICARFT/IMPCHase bienzyme F9277_18010 PF13411 MerR HTH family regulatory protein F9277_18015 PF18500 CadC C-terminal domain 1 F9277_18015 PF00486 Transcriptional regulatory protein, C terminal F9277_18025 PF13520 Amino acid permease F9277_18030 PF01276 Orn/Lys/Arg decarboxylase, major domain F9277_18030 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F9277_18030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F9277_18035 PF00107 Zinc-binding dehydrogenase F9277_18035 PF08240 Alcohol dehydrogenase GroES-like domain F9277_18075 PF00440 Bacterial regulatory proteins, tetR family F9277_18075 PF13977 BetI-type transcriptional repressor, C-terminal F9277_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18080 PF03466 LysR substrate binding domain F9277_18095 PF12848 ABC transporter F9277_18095 PF00005 ABC transporter F9277_18100 PF13409 Glutathione S-transferase, N-terminal domain F9277_18105 PF03358 NADPH-dependent FMN reductase F9277_18110 PF03466 LysR substrate binding domain F9277_18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18115 PF09905 DNA-binding protein VF530 F9277_18120 PF00005 ABC transporter F9277_18120 PF12848 ABC transporter F9277_18135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_18140 PF02567 Phenazine biosynthesis-like protein F9277_18155 PF05114 Protein of unknown function (DUF692) F9277_18170 PF01654 Cytochrome bd terminal oxidase subunit I F9277_18175 PF02322 Cytochrome bd terminal oxidase subunit II F9277_18195 PF13344 Haloacid dehalogenase-like hydrolase F9277_18195 PF00293 NUDIX domain F9277_18210 PF00561 alpha/beta hydrolase fold F9277_18215 PF12833 Helix-turn-helix domain F9277_18215 PF12852 Cupin F9277_18220 PF12833 Helix-turn-helix domain F9277_18220 PF17853 GGDEF-like domain F9277_18235 PF04055 Radical SAM superfamily F9277_18240 PF00923 Transaldolase/Fructose-6-phosphate aldolase F9277_18255 PF00672 HAMP domain F9277_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_18255 PF00512 His Kinase A (phospho-acceptor) domain F9277_18260 PF00072 Response regulator receiver domain F9277_18260 PF00486 Transcriptional regulatory protein, C terminal F9277_18270 PF00583 Acetyltransferase (GNAT) family F9277_18280 PF07690 Major Facilitator Superfamily F9277_18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18285 PF03466 LysR substrate binding domain F9277_18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18295 PF03466 LysR substrate binding domain F9277_18300 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F9277_18310 PF00892 EamA-like transporter family F9277_18330 PF13533 Biotin-lipoyl like F9277_18340 PF01594 AI-2E family transporter F9277_18345 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F9277_18360 PF00970 Oxidoreductase FAD-binding domain F9277_18360 PF00175 Oxidoreductase NAD-binding domain F9277_18370 PF09905 DNA-binding protein VF530 F9277_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18375 PF03466 LysR substrate binding domain F9277_18385 PF00881 Nitroreductase family F9277_18395 PF00686 Starch binding domain F9277_18395 PF00128 Alpha amylase, catalytic domain F9277_18400 PF07943 Penicillin-binding protein 5, C-terminal domain F9277_18400 PF00768 D-alanyl-D-alanine carboxypeptidase F9277_18405 PF00561 alpha/beta hydrolase fold F9277_18415 PF01809 Putative membrane protein insertion efficiency factor F9277_18435 PF00268 Ribonucleotide reductase, small chain F9277_18440 PF00317 Ribonucleotide reductase, all-alpha domain F9277_18440 PF02867 Ribonucleotide reductase, barrel domain F9277_18440 PF03477 ATP cone domain F9277_18455 PF03441 FAD binding domain of DNA photolyase F9277_18455 PF00875 DNA photolyase F9277_18460 PF02469 Fasciclin domain F9277_18470 PF01734 Patatin-like phospholipase F9277_18475 PF01914 MarC family integral membrane protein F9277_18480 PF00881 Nitroreductase family F9277_18485 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F9277_18485 PF10531 SLBB domain F9277_18485 PF02563 Polysaccharide biosynthesis/export protein F9277_18490 PF01451 Low molecular weight phosphotyrosine protein phosphatase F9277_18495 PF13807 G-rich domain on putative tyrosine kinase F9277_18495 PF13614 AAA domain F9277_18495 PF02706 Chain length determinant protein F9277_18505 PF08803 Putative mono-oxygenase ydhR F9277_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18510 PF03466 LysR substrate binding domain F9277_18540 PF00375 Sodium:dicarboxylate symporter family F9277_18555 PF06803 Protein of unknown function (DUF1232) F9277_18560 PF01546 Peptidase family M20/M25/M40 F9277_18560 PF07687 Peptidase dimerisation domain F9277_18565 PF07670 Nucleoside recognition F9277_18570 PF07670 Nucleoside recognition F9277_18585 PF00128 Alpha amylase, catalytic domain F9277_18590 PF00912 Transglycosylase F9277_18595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F9277_18595 PF02806 Alpha amylase, C-terminal all-beta domain F9277_18595 PF00128 Alpha amylase, catalytic domain F9277_18600 PF02446 4-alpha-glucanotransferase F9277_18610 PF00343 Carbohydrate phosphorylase F9277_18620 PF00196 Bacterial regulatory proteins, luxR family F9277_18620 PF17874 MalT-like TPR region F9277_18635 PF02630 SCO1/SenC F9277_18645 PF02378 Phosphotransferase system, EIIC F9277_18645 PF00367 phosphotransferase system, EIIB F9277_18650 PF03193 RsgA GTPase F9277_18655 PF00375 Sodium:dicarboxylate symporter family F9277_18660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_18660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F9277_18675 PF01116 Fructose-bisphosphate aldolase class-II F9277_18685 PF00294 pfkB family carbohydrate kinase F9277_18690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_18690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F9277_18695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F9277_18695 PF00205 Thiamine pyrophosphate enzyme, central domain F9277_18695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F9277_18700 PF01261 Xylose isomerase-like TIM barrel F9277_18705 PF00083 Sugar (and other) transporter F9277_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18710 PF03466 LysR substrate binding domain F9277_18720 PF01261 Xylose isomerase-like TIM barrel F9277_18725 PF00108 Thiolase, N-terminal domain F9277_18725 PF02803 Thiolase, C-terminal domain F9277_18730 PF01144 Coenzyme A transferase F9277_18735 PF01144 Coenzyme A transferase F9277_18745 PF08543 Phosphomethylpyrimidine kinase F9277_18755 PF13520 Amino acid permease F9277_18760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F9277_18760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F9277_18760 PF01276 Orn/Lys/Arg decarboxylase, major domain F9277_18775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F9277_18775 PF03714 Bacterial pullanase-associated domain F9277_18775 PF11852 Domain of unknown function (DUF3372) F9277_18775 PF18494 Pullulanase Ins domain F9277_18775 PF17967 Pullulanase N2 domain F9277_18780 PF02595 Glycerate kinase family F9277_18785 PF05651 Putative sugar diacid recognition F9277_18785 PF17853 GGDEF-like domain F9277_18785 PF13556 PucR C-terminal helix-turn-helix domain F9277_18795 PF01979 Amidohydrolase family F9277_18840 PF03466 LysR substrate binding domain F9277_18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_18855 PF00005 ABC transporter F9277_18855 PF00664 ABC transporter transmembrane region F9277_18860 PF00005 ABC transporter F9277_18860 PF00664 ABC transporter transmembrane region F9277_18865 PF00593 TonB dependent receptor F9277_18865 PF07715 TonB-dependent Receptor Plug Domain F9277_18875 PF12833 Helix-turn-helix domain F9277_18880 PF03974 Ecotin F9277_18890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_18905 PF01204 Trehalase F9277_18925 PF07690 Major Facilitator Superfamily F9277_18930 PF13533 Biotin-lipoyl like F9277_18940 PF16868 NMT1-like family F9277_18945 PF03922 OmpW family F9277_18950 PF13599 Pentapeptide repeats (9 copies) F9277_18975 PF00893 Small Multidrug Resistance protein F9277_18985 PF18416 N-acetylglucosamine binding protein domain 2 F9277_18985 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading F9277_18990 PF01037 Lrp/AsnC ligand binding domain F9277_18995 PF01810 LysE type translocator F9277_19000 PF00326 Prolyl oligopeptidase family F9277_19005 PF04954 Siderophore-interacting protein F9277_19005 PF08021 Siderophore-interacting FAD-binding domain F9277_19010 PF03466 LysR substrate binding domain F9277_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_19020 PF00797 N-acetyltransferase F9277_19025 PF00107 Zinc-binding dehydrogenase F9277_19025 PF08240 Alcohol dehydrogenase GroES-like domain F9277_19030 PF00756 Putative esterase F9277_19040 PF05656 Protein of unknown function (DUF805) F9277_19050 PF00990 Diguanylate cyclase, GGDEF domain F9277_19050 PF17152 Periplasmic sensor domain F9277_19070 PF01809 Putative membrane protein insertion efficiency factor F9277_19075 PF00849 RNA pseudouridylate synthase F9277_19080 PF01554 MatE F9277_19085 PF00356 Bacterial regulatory proteins, lacI family F9277_19090 PF17912 MalK OB fold domain F9277_19090 PF00005 ABC transporter F9277_19095 PF00232 Glycosyl hydrolase family 1 F9277_19100 PF00528 Binding-protein-dependent transport system inner membrane component F9277_19105 PF00528 Binding-protein-dependent transport system inner membrane component F9277_19115 PF00356 Bacterial regulatory proteins, lacI family F9277_19120 PF02264 LamB porin F9277_19125 PF00990 Diguanylate cyclase, GGDEF domain F9277_19125 PF00563 EAL domain F9277_19135 PF06865 Pyrimidine/purine nucleoside phosphorylase F9277_19145 PF00704 Glycosyl hydrolases family 18 F9277_19145 PF08329 Chitinase A, N-terminal domain F9277_19165 PF03600 Citrate transporter F9277_19190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 F9277_19210 PF01116 Fructose-bisphosphate aldolase class-II F9277_19215 PF01979 Amidohydrolase family F9277_19220 PF03610 PTS system fructose IIA component F9277_19225 PF03613 PTS system mannose/fructose/sorbose family IID component F9277_19230 PF03609 PTS system sorbose-specific iic component F9277_19235 PF03830 PTS system sorbose subfamily IIB component F9277_19240 PF01380 SIS domain F9277_19245 PF08013 Tagatose 6 phosphate kinase F9277_19250 PF00455 DeoR C terminal sensor domain F9277_19250 PF08220 DeoR-like helix-turn-helix domain F9277_19255 PF08220 DeoR-like helix-turn-helix domain F9277_19255 PF00455 DeoR C terminal sensor domain F9277_19265 PF00005 ABC transporter F9277_19300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F9277_19300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F9277_19305 PF00730 HhH-GPD superfamily base excision DNA repair protein F9277_19305 PF06029 AlkA N-terminal domain F9277_19315 PF07681 DoxX F9277_19320 PF03466 LysR substrate binding domain F9277_19320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_19335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F9277_19355 PF01261 Xylose isomerase-like TIM barrel F9277_19360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F9277_19370 PF00596 Class II Aldolase and Adducin N-terminal domain F9277_19375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_19380 PF03611 PTS system sugar-specific permease component F9277_19385 PF08220 DeoR-like helix-turn-helix domain F9277_19385 PF00455 DeoR C terminal sensor domain F9277_19395 PF00194 Eukaryotic-type carbonic anhydrase F9277_19405 PF02492 CobW/HypB/UreG, nucleotide-binding domain F9277_19410 PF12833 Helix-turn-helix domain F9277_19415 PF01272 Transcription elongation factor, GreA/GreB, C-term F9277_19415 PF14760 Rnk N-terminus F9277_19420 PF01042 Endoribonuclease L-PSP F9277_19440 PF01032 FecCD transport family F9277_19450 PF00005 ABC transporter F9277_19455 PF12833 Helix-turn-helix domain F9277_19465 PF02492 CobW/HypB/UreG, nucleotide-binding domain F9277_19510 PF02386 Cation transport protein F9277_19515 PF12833 Helix-turn-helix domain F9277_19535 PF03616 Sodium/glutamate symporter F9277_19540 PF00155 Aminotransferase class I and II F9277_19540 PF00392 Bacterial regulatory proteins, gntR family F9277_19545 PF00005 ABC transporter F9277_19560 PF03616 Sodium/glutamate symporter F9277_19565 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_19580 PF00672 HAMP domain F9277_19580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_19580 PF17200 Single Cache domain 2 F9277_19585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F9277_19595 PF00072 Response regulator receiver domain F9277_19595 PF04397 LytTr DNA-binding domain F9277_19600 PF13492 GAF domain F9277_19600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_19600 PF07694 5TMR of 5TMR-LYT F9277_19600 PF06580 Histidine kinase F9277_19620 PF00005 ABC transporter F9277_19630 PF03466 LysR substrate binding domain F9277_19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_19635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_19650 PF01098 Cell cycle protein F9277_19655 PF01709 Transcriptional regulator F9277_19665 PF00512 His Kinase A (phospho-acceptor) domain F9277_19665 PF17149 Periplasmic sensor domain found in signal transduction proteins F9277_19665 PF01627 Hpt domain F9277_19665 PF00072 Response regulator receiver domain F9277_19665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_19665 PF00672 HAMP domain F9277_19675 PF00925 GTP cyclohydrolase II F9277_19675 PF08719 Domain of unknown function (DUF1768) F9277_19685 PF00005 ABC transporter F9277_19685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_19690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_19690 PF00005 ABC transporter F9277_19705 PF18607 ParA helix turn helix domain F9277_19705 PF13614 AAA domain F9277_19710 PF02195 ParB-like nuclease domain F9277_19710 PF08775 ParB family F9277_19715 PF13718 GNAT acetyltransferase 2 F9277_19715 PF05127 Helicase F9277_19720 PF03544 Gram-negative bacterial TonB protein C-terminal F9277_19725 PF02472 Biopolymer transport protein ExbD/TolR F9277_19730 PF01618 MotA/TolQ/ExbB proton channel family F9277_19765 PF08281 Sigma-70, region 4 F9277_19765 PF04542 Sigma-70 region 2 F9277_19775 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_19780 PF03466 LysR substrate binding domain F9277_19790 PF00246 Zinc carboxypeptidase F9277_19795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_19800 PF03358 NADPH-dependent FMN reductase F9277_19810 PF00005 ABC transporter F9277_19810 PF00664 ABC transporter transmembrane region F9277_19810 PF03412 Peptidase C39 family F9277_19825 PF00529 HlyD membrane-fusion protein of T1SS F9277_19830 PF00072 Response regulator receiver domain F9277_19830 PF02954 Bacterial regulatory protein, Fis family F9277_19830 PF00158 Sigma-54 interaction domain F9277_19835 PF00512 His Kinase A (phospho-acceptor) domain F9277_19835 PF02743 Cache domain F9277_19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_19840 PF01243 Pyridoxamine 5'-phosphate oxidase F9277_19840 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F9277_19850 PF12833 Helix-turn-helix domain F9277_19855 PF00171 Aldehyde dehydrogenase family F9277_19855 PF01619 Proline dehydrogenase F9277_19855 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F9277_19855 PF14850 DNA-binding domain of Proline dehydrogenase F9277_19865 PF00474 Sodium:solute symporter family F9277_19910 PF01037 Lrp/AsnC ligand binding domain F9277_19920 PF00664 ABC transporter transmembrane region F9277_19920 PF00005 ABC transporter F9277_19935 PF00478 IMP dehydrogenase / GMP reductase domain F9277_19935 PF00571 CBS domain F9277_19945 PF13186 Iron-sulfur cluster-binding domain F9277_19945 PF04055 Radical SAM superfamily F9277_19950 PF02264 LamB porin F9277_19955 PF07470 Glycosyl Hydrolase Family 88 F9277_19960 PF00474 Sodium:solute symporter family F9277_19965 PF04962 KduI/IolB family F9277_19975 PF00294 pfkB family carbohydrate kinase F9277_19980 PF01081 KDPG and KHG aldolase F9277_19995 PF00884 Sulfatase F9277_20000 PF02656 Domain of unknown function (DUF202) F9277_20015 PF01042 Endoribonuclease L-PSP F9277_20020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F9277_20020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F9277_20025 PF04371 Porphyromonas-type peptidyl-arginine deiminase F9277_20030 PF13520 Amino acid permease F9277_20035 PF00696 Amino acid kinase family F9277_20040 PF00440 Bacterial regulatory proteins, tetR family F9277_20045 PF10688 Bacterial inner membrane protein F9277_20050 PF01081 KDPG and KHG aldolase F9277_20055 PF00294 pfkB family carbohydrate kinase F9277_20060 PF02614 Glucuronate isomerase F9277_20065 PF01232 Mannitol dehydrogenase Rossmann domain F9277_20065 PF08125 Mannitol dehydrogenase C-terminal domain F9277_20070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F9277_20075 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component F9277_20080 PF03480 Bacterial extracellular solute-binding protein, family 7 F9277_20085 PF07729 FCD domain F9277_20085 PF00392 Bacterial regulatory proteins, gntR family F9277_20090 PF03786 D-mannonate dehydratase (UxuA) F9277_20095 PF13443 Cro/C1-type HTH DNA-binding domain F9277_20110 PF00155 Aminotransferase class I and II F9277_20115 PF04542 Sigma-70 region 2 F9277_20115 PF08281 Sigma-70, region 4 F9277_20125 PF00271 Helicase conserved C-terminal domain F9277_20125 PF00270 DEAD/DEAH box helicase F9277_20130 PF06629 MltA-interacting protein MipA F9277_20140 PF13673 Acetyltransferase (GNAT) domain F9277_20145 PF03475 3-alpha domain F9277_20145 PF03473 MOSC domain F9277_20160 PF01037 Lrp/AsnC ligand binding domain F9277_20160 PF13404 AsnC-type helix-turn-helix domain F9277_20165 PF01810 LysE type translocator F9277_20175 PF00672 HAMP domain F9277_20175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_20175 PF02743 Cache domain F9277_20180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_20215 PF01547 Bacterial extracellular solute-binding protein F9277_20220 PF02903 Alpha amylase, N-terminal ig-like domain F9277_20220 PF16657 Maltogenic Amylase, C-terminal domain F9277_20220 PF00128 Alpha amylase, catalytic domain F9277_20225 PF00128 Alpha amylase, catalytic domain F9277_20225 PF16657 Maltogenic Amylase, C-terminal domain F9277_20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_20230 PF03466 LysR substrate binding domain F9277_20265 PF13192 Thioredoxin domain F9277_20265 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_20270 PF10417 C-terminal domain of 1-Cys peroxiredoxin F9277_20270 PF00578 AhpC/TSA family F9277_20280 PF01047 MarR family F9277_20285 PF02566 OsmC-like protein F9277_20300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_20300 PF17200 Single Cache domain 2 F9277_20300 PF00672 HAMP domain F9277_20305 PF05193 Peptidase M16 inactive domain F9277_20305 PF00675 Insulinase (Peptidase family M16) F9277_20330 PF04225 Opacity-associated protein A LysM-like domain F9277_20330 PF01551 Peptidase family M23 F9277_20340 PF13533 Biotin-lipoyl like F9277_20350 PF00440 Bacterial regulatory proteins, tetR family F9277_20350 PF08360 QacR-like protein, C-terminal region F9277_20355 PF00005 ABC transporter F9277_20360 PF01032 FecCD transport family F9277_20365 PF01032 FecCD transport family F9277_20375 PF01497 Periplasmic binding protein F9277_20380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_20380 PF03466 LysR substrate binding domain F9277_20385 PF07715 TonB-dependent Receptor Plug Domain F9277_20385 PF00593 TonB dependent receptor F9277_20390 PF00892 EamA-like transporter family F9277_20405 PF07690 Major Facilitator Superfamily F9277_20430 PF17179 4Fe-4S dicluster domain F9277_20435 PF14824 Sirohaem biosynthesis protein central F9277_20435 PF10414 Sirohaem synthase dimerisation region F9277_20435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_20440 PF00990 Diguanylate cyclase, GGDEF domain F9277_20445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F9277_20445 PF00128 Alpha amylase, catalytic domain F9277_20450 PF02264 LamB porin F9277_20465 PF16657 Maltogenic Amylase, C-terminal domain F9277_20465 PF02903 Alpha amylase, N-terminal ig-like domain F9277_20465 PF00128 Alpha amylase, catalytic domain F9277_20470 PF04231 Endonuclease I F9277_20475 PF00155 Aminotransferase class I and II F9277_20475 PF00392 Bacterial regulatory proteins, gntR family F9277_20520 PF00583 Acetyltransferase (GNAT) family F9277_20550 PF03264 NapC/NirT cytochrome c family, N-terminal region F9277_20555 PF01568 Molydopterin dinucleotide binding domain F9277_20555 PF18364 Molybdopterin oxidoreductase N-terminal domain F9277_20555 PF00384 Molybdopterin oxidoreductase F9277_20560 PF01569 PAP2 superfamily F9277_20565 PF02581 Thiamine monophosphate synthase F9277_20570 PF02110 Hydroxyethylthiazole kinase family F9277_20575 PF03070 TENA/THI-4/PQQC family F9277_20580 PF09084 NMT1/THI5 like F9277_20585 PF00528 Binding-protein-dependent transport system inner membrane component F9277_20590 PF00005 ABC transporter F9277_20595 PF08543 Phosphomethylpyrimidine kinase F9277_20600 PF01523 Putative modulator of DNA gyrase F9277_20605 PF01523 Putative modulator of DNA gyrase F9277_20610 PF04013 Putative SAM-dependent RNA methyltransferase F9277_20665 PF10928 Protein of unknown function (DUF2810) F9277_20670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F9277_20670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F9277_20680 PF03009 Glycerophosphoryl diester phosphodiesterase family F9277_20690 PF00486 Transcriptional regulatory protein, C terminal F9277_20690 PF00072 Response regulator receiver domain F9277_20695 PF00512 His Kinase A (phospho-acceptor) domain F9277_20695 PF00672 HAMP domain F9277_20695 PF16750 Sensor domain of 2-component histidine kinase F9277_20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_20700 PF07715 TonB-dependent Receptor Plug Domain F9277_20700 PF00593 TonB dependent receptor F9277_20710 PF01618 MotA/TolQ/ExbB proton channel family F9277_20715 PF01618 MotA/TolQ/ExbB proton channel family F9277_20720 PF02472 Biopolymer transport protein ExbD/TolR F9277_20765 PF01297 Zinc-uptake complex component A periplasmic F9277_20770 PF00005 ABC transporter F9277_20775 PF00950 ABC 3 transport family F9277_20790 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F9277_20790 PF00326 Prolyl oligopeptidase family F9277_20795 PF07690 Major Facilitator Superfamily F9277_20800 PF00491 Arginase family F9277_20805 PF17810 Arginine decarboxylase helical bundle domain F9277_20805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F9277_20805 PF17944 Arginine decarboxylase C-terminal helical extension F9277_20810 PF00753 Metallo-beta-lactamase superfamily F9277_20815 PF08443 RimK-like ATP-grasp domain F9277_20815 PF18030 RimK PreATP-grasp domain F9277_20820 PF08443 RimK-like ATP-grasp domain F9277_20820 PF18030 RimK PreATP-grasp domain F9277_20835 PF12706 Beta-lactamase superfamily domain F9277_20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_20845 PF03466 LysR substrate binding domain F9277_20870 PF00232 Glycosyl hydrolase family 1 F9277_20875 PF02743 Cache domain F9277_20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_20875 PF00512 His Kinase A (phospho-acceptor) domain F9277_20880 PF00158 Sigma-54 interaction domain F9277_20880 PF02954 Bacterial regulatory protein, Fis family F9277_20880 PF00072 Response regulator receiver domain F9277_20885 PF05525 Branched-chain amino acid transport protein F9277_20910 PF01266 FAD dependent oxidoreductase F9277_20920 PF03116 NQR2, RnfD, RnfE family F9277_20925 PF01212 Beta-eliminating lyase F9277_20945 PF01773 Na+ dependent nucleoside transporter N-terminus F9277_20945 PF07662 Na+ dependent nucleoside transporter C-terminus F9277_20945 PF07670 Nucleoside recognition F9277_20950 PF00483 Nucleotidyl transferase F9277_20970 PF00990 Diguanylate cyclase, GGDEF domain F9277_20970 PF05230 MASE2 domain F9277_20985 PF00990 Diguanylate cyclase, GGDEF domain F9277_20990 PF00875 DNA photolyase F9277_20990 PF03441 FAD binding domain of DNA photolyase F9277_20995 PF04244 Deoxyribodipyrimidine photo-lyase-related protein F9277_21010 PF01625 Peptide methionine sulfoxide reductase F9277_21010 PF01641 SelR domain F9277_21015 PF02566 OsmC-like protein F9277_21020 PF14602 Hexapeptide repeat of succinyl-transferase F9277_21020 PF12464 Maltose acetyltransferase F9277_21060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21060 PF03466 LysR substrate binding domain F9277_21065 PF13419 Haloacid dehalogenase-like hydrolase F9277_21100 PF00657 GDSL-like Lipase/Acylhydrolase F9277_21115 PF03611 PTS system sugar-specific permease component F9277_21125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_21130 PF00356 Bacterial regulatory proteins, lacI family F9277_21135 PF13419 Haloacid dehalogenase-like hydrolase F9277_21145 PF00266 Aminotransferase class-V F9277_21155 PF00005 ABC transporter F9277_21160 PF00528 Binding-protein-dependent transport system inner membrane component F9277_21165 PF00392 Bacterial regulatory proteins, gntR family F9277_21165 PF07702 UTRA domain F9277_21180 PF04393 Protein of unknown function (DUF535) F9277_21190 PF01266 FAD dependent oxidoreductase F9277_21195 PF18027 Cytosolic carboxypeptidase N-terminal domain F9277_21195 PF00246 Zinc carboxypeptidase F9277_21200 PF01389 OmpA-like transmembrane domain F9277_21200 PF00691 OmpA family F9277_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21205 PF03466 LysR substrate binding domain F9277_21215 PF03466 LysR substrate binding domain F9277_21215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21225 PF01566 Natural resistance-associated macrophage protein F9277_21230 PF00854 POT family F9277_21235 PF03315 Serine dehydratase beta chain F9277_21235 PF03313 Serine dehydratase alpha chain F9277_21260 PF01476 LysM domain F9277_21260 PF01464 Transglycosylase SLT domain F9277_21280 PF00460 Flagella basal body rod protein F9277_21285 PF00460 Flagella basal body rod protein F9277_21285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_21290 PF03963 Flagellar hook capping protein - N-terminal region F9277_21290 PF13860 FlgD Ig-like domain F9277_21290 PF13861 FlgD Tudor-like domain F9277_21295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_21295 PF07559 Flagellar basal body protein FlaE F9277_21295 PF00460 Flagella basal body rod protein F9277_21300 PF00460 Flagella basal body rod protein F9277_21300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_21305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_21305 PF00460 Flagella basal body rod protein F9277_21310 PF02107 Flagellar L-ring protein F9277_21315 PF02119 Flagellar P-ring protein F9277_21320 PF10135 Rod binding protein F9277_21320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F9277_21325 PF00460 Flagella basal body rod protein F9277_21325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F9277_21330 PF00669 Bacterial flagellin N-terminal helical region F9277_21350 PF01070 FMN-dependent dehydrogenase F9277_21365 PF08241 Methyltransferase domain F9277_21385 PF03239 Iron permease FTR1 family F9277_21390 PF10634 Fe2+ transport protein F9277_21410 PF00005 ABC transporter F9277_21415 PF00578 AhpC/TSA family F9277_21425 PF04205 FMN-binding domain F9277_21440 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_21450 PF08000 Bacterial PH domain F9277_21475 PF13677 Membrane MotB of proton-channel complex MotA/MotB F9277_21475 PF00691 OmpA family F9277_21480 PF01618 MotA/TolQ/ExbB proton channel family F9277_21485 PF04542 Sigma-70 region 2 F9277_21485 PF04545 Sigma-70, region 4 F9277_21490 PF03748 Flagellar basal body-associated protein FliL F9277_21505 PF02561 Flagellar protein FliS F9277_21510 PF02465 Flagellar hook-associated protein 2 N-terminus F9277_21510 PF07195 Flagellar hook-associated protein 2 C-terminus F9277_21510 PF07196 Flagellin hook IN motif F9277_21520 PF00669 Bacterial flagellin N-terminal helical region F9277_21520 PF00700 Bacterial flagellin C-terminal helical region F9277_21530 PF00771 FHIPEP family F9277_21535 PF01312 FlhB HrpN YscU SpaS Family F9277_21540 PF01311 Bacterial export proteins, family 1 F9277_21545 PF01313 Bacterial export proteins, family 3 F9277_21550 PF00813 FliP family F9277_21555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F9277_21570 PF00072 Response regulator receiver domain F9277_21570 PF00158 Sigma-54 interaction domain F9277_21570 PF02954 Bacterial regulatory protein, Fis family F9277_21575 PF02049 Flagellar hook-basal body complex protein FliE F9277_21580 PF08345 Flagellar M-ring protein C-terminal F9277_21580 PF01514 Secretory protein of YscJ/FliF family F9277_21585 PF14841 FliG middle domain F9277_21585 PF01706 FliG C-terminal domain F9277_21585 PF14842 FliG N-terminal domain F9277_21595 PF18269 T3SS EscN ATPase C-terminal domain F9277_21595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_21605 PF00563 EAL domain F9277_21605 PF05231 MASE1 F9277_21615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21615 PF03466 LysR substrate binding domain F9277_21650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21655 PF03466 LysR substrate binding domain F9277_21675 PF00072 Response regulator receiver domain F9277_21675 PF00486 Transcriptional regulatory protein, C terminal F9277_21680 PF00512 His Kinase A (phospho-acceptor) domain F9277_21680 PF08448 PAS fold F9277_21680 PF13426 PAS domain F9277_21680 PF00072 Response regulator receiver domain F9277_21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_21685 PF00266 Aminotransferase class-V F9277_21690 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_21695 PF00990 Diguanylate cyclase, GGDEF domain F9277_21695 PF00563 EAL domain F9277_21695 PF03707 Bacterial signalling protein N terminal repeat F9277_21700 PF00155 Aminotransferase class I and II F9277_21705 PF08240 Alcohol dehydrogenase GroES-like domain F9277_21705 PF00107 Zinc-binding dehydrogenase F9277_21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21720 PF03466 LysR substrate binding domain F9277_21745 PF00293 NUDIX domain F9277_21755 PF11008 Protein of unknown function (DUF2846) F9277_21760 PF00194 Eukaryotic-type carbonic anhydrase F9277_21765 PF09278 MerR, DNA binding F9277_21765 PF00376 MerR family regulatory protein F9277_21790 PF13091 PLD-like domain F9277_21795 PF13533 Biotin-lipoyl like F9277_21800 PF00873 AcrB/AcrD/AcrF family F9277_21810 PF00873 AcrB/AcrD/AcrF family F9277_21850 PF13193 AMP-binding enzyme C-terminal domain F9277_21850 PF00501 AMP-binding enzyme F9277_21855 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_21860 PF00703 Glycosyl hydrolases family 2 F9277_21860 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 F9277_21860 PF02837 Glycosyl hydrolases family 2, sugar binding domain F9277_21860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F9277_21865 PF00196 Bacterial regulatory proteins, luxR family F9277_21875 PF00563 EAL domain F9277_21875 PF00990 Diguanylate cyclase, GGDEF domain F9277_21875 PF03707 Bacterial signalling protein N terminal repeat F9277_21890 PF03616 Sodium/glutamate symporter F9277_21895 PF02600 Disulfide bond formation protein DsbB F9277_21900 PF02321 Outer membrane efflux protein F9277_21905 PF00873 AcrB/AcrD/AcrF family F9277_21910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_21915 PF03466 LysR substrate binding domain F9277_21915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21930 PF00579 tRNA synthetases class I (W and Y) F9277_21935 PF00196 Bacterial regulatory proteins, luxR family F9277_21935 PF00072 Response regulator receiver domain F9277_21945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F9277_21945 PF00391 PEP-utilising enzyme, mobile domain F9277_21945 PF02896 PEP-utilising enzyme, TIM barrel domain F9277_21950 PF03618 Kinase/pyrophosphorylase F9277_21955 PF00710 Asparaginase, N-terminal F9277_21955 PF17763 Glutaminase/Asparaginase C-terminal domain F9277_21960 PF00563 EAL domain F9277_21960 PF00990 Diguanylate cyclase, GGDEF domain F9277_21960 PF13185 GAF domain F9277_21970 PF03466 LysR substrate binding domain F9277_21970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_21990 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) F9277_22005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9277_22015 PF07690 Major Facilitator Superfamily F9277_22025 PF03466 LysR substrate binding domain F9277_22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22045 PF03466 LysR substrate binding domain F9277_22055 PF00271 Helicase conserved C-terminal domain F9277_22055 PF00270 DEAD/DEAH box helicase F9277_22065 PF00535 Glycosyl transferase family 2 F9277_22075 PF03099 Biotin/lipoate A/B protein ligase family F9277_22095 PF00155 Aminotransferase class I and II F9277_22100 PF12833 Helix-turn-helix domain F9277_22100 PF01497 Periplasmic binding protein F9277_22105 PF03466 LysR substrate binding domain F9277_22105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22115 PF13419 Haloacid dehalogenase-like hydrolase F9277_22120 PF00158 Sigma-54 interaction domain F9277_22120 PF01590 GAF domain F9277_22125 PF00301 Rubredoxin F9277_22125 PF00753 Metallo-beta-lactamase superfamily F9277_22125 PF00258 Flavodoxin F9277_22130 PF18113 Rubredoxin binding C-terminal domain F9277_22130 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_22145 PF11742 Protein of unknown function (DUF3302) F9277_22150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_22150 PF00529 HlyD membrane-fusion protein of T1SS F9277_22155 PF03466 LysR substrate binding domain F9277_22155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22165 PF01238 Phosphomannose isomerase type I F9277_22170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_22170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_22175 PF12833 Helix-turn-helix domain F9277_22185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_22195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22195 PF03466 LysR substrate binding domain F9277_22205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9277_22205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9277_22210 PF06628 Catalase-related immune-responsive F9277_22210 PF00199 Catalase F9277_22220 PF00107 Zinc-binding dehydrogenase F9277_22220 PF16884 N-terminal domain of oxidoreductase F9277_22225 PF16925 Tetracyclin repressor-like, C-terminal domain F9277_22225 PF00440 Bacterial regulatory proteins, tetR family F9277_22260 PF00534 Glycosyl transferases group 1 F9277_22260 PF13439 Glycosyltransferase Family 4 F9277_22270 PF02706 Chain length determinant protein F9277_22270 PF13807 G-rich domain on putative tyrosine kinase F9277_22270 PF13614 AAA domain F9277_22285 PF02397 Bacterial sugar transferase F9277_22290 PF00005 ABC transporter F9277_22290 PF08402 TOBE domain F9277_22300 PF01547 Bacterial extracellular solute-binding protein F9277_22305 PF14785 Maltose transport system permease protein MalF P2 domain F9277_22305 PF00528 Binding-protein-dependent transport system inner membrane component F9277_22310 PF00528 Binding-protein-dependent transport system inner membrane component F9277_22355 PF01464 Transglycosylase SLT domain F9277_22355 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F9277_22380 PF05661 Protein of unknown function (DUF808) F9277_22385 PF01979 Amidohydrolase family F9277_22395 PF01679 Proteolipid membrane potential modulator F9277_22400 PF03473 MOSC domain F9277_22400 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_22400 PF03476 MOSC N-terminal beta barrel domain F9277_22400 PF03473 MOSC domain F9277_22400 PF00111 2Fe-2S iron-sulfur cluster binding domain F9277_22400 PF03476 MOSC N-terminal beta barrel domain F9277_22405 PF02540 NAD synthase F9277_22410 PF01467 Cytidylyltransferase-like F9277_22450 PF03466 LysR substrate binding domain F9277_22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22480 PF00857 Isochorismatase family F9277_22485 PF01965 DJ-1/PfpI family F9277_22485 PF12833 Helix-turn-helix domain F9277_22490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_22495 PF00884 Sulfatase F9277_22495 PF08019 Phosphoethanolamine transferase EptA/EptB F9277_22500 PF01219 Prokaryotic diacylglycerol kinase F9277_22510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_22510 PF00672 HAMP domain F9277_22510 PF00512 His Kinase A (phospho-acceptor) domain F9277_22515 PF00486 Transcriptional regulatory protein, C terminal F9277_22515 PF00072 Response regulator receiver domain F9277_22520 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_22525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F9277_22525 PF13378 Enolase C-terminal domain-like F9277_22530 PF04205 FMN-binding domain F9277_22530 PF00890 FAD binding domain F9277_22535 PF00392 Bacterial regulatory proteins, gntR family F9277_22535 PF07729 FCD domain F9277_22540 PF07963 Prokaryotic N-terminal methylation motif F9277_22540 PF00114 Pilin (bacterial filament) F9277_22545 PF00106 short chain dehydrogenase F9277_22560 PF01323 DSBA-like thioredoxin domain F9277_22575 PF00255 Glutathione peroxidase F9277_22580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F9277_22590 PF07690 Major Facilitator Superfamily F9277_22605 PF01966 HD domain F9277_22620 PF07969 Amidohydrolase family F9277_22625 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F9277_22630 PF01769 Divalent cation transporter F9277_22630 PF03448 MgtE intracellular N domain F9277_22630 PF00571 CBS domain F9277_22635 PF03109 ABC1 family F9277_22640 PF00529 HlyD membrane-fusion protein of T1SS F9277_22640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_22665 PF00486 Transcriptional regulatory protein, C terminal F9277_22665 PF00072 Response regulator receiver domain F9277_22670 PF00512 His Kinase A (phospho-acceptor) domain F9277_22670 PF00672 HAMP domain F9277_22670 PF16527 Two-component sensor protein CpxA, periplasmic domain F9277_22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_22680 PF00392 Bacterial regulatory proteins, gntR family F9277_22680 PF00155 Aminotransferase class I and II F9277_22685 PF13520 Amino acid permease F9277_22690 PF13404 AsnC-type helix-turn-helix domain F9277_22690 PF01037 Lrp/AsnC ligand binding domain F9277_22700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_22700 PF03466 LysR substrate binding domain F9277_22715 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F9277_22715 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F9277_22720 PF00512 His Kinase A (phospho-acceptor) domain F9277_22720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F9277_22720 PF01627 Hpt domain F9277_22720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_22720 PF00072 Response regulator receiver domain F9277_22720 PF00672 HAMP domain F9277_22725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F9277_22730 PF01554 MatE F9277_22735 PF04363 Protein of unknown function (DUF496) F9277_22745 PF04337 Protein of unknown function, DUF480 F9277_22750 PF01541 GIY-YIG catalytic domain F9277_22755 PF13407 Periplasmic binding protein domain F9277_22760 PF09308 LuxQ, periplasmic F9277_22760 PF00512 His Kinase A (phospho-acceptor) domain F9277_22760 PF00072 Response regulator receiver domain F9277_22760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_22775 PF01037 Lrp/AsnC ligand binding domain F9277_22805 PF13721 SecD export protein N-terminal TM region F9277_22805 PF07549 SecD/SecF GG Motif F9277_22805 PF02355 Protein export membrane protein F9277_22810 PF02355 Protein export membrane protein F9277_22810 PF07549 SecD/SecF GG Motif F9277_22820 PF01810 LysE type translocator F9277_22825 PF00106 short chain dehydrogenase F9277_22830 PF00108 Thiolase, N-terminal domain F9277_22830 PF02803 Thiolase, C-terminal domain F9277_22840 PF00561 alpha/beta hydrolase fold F9277_22840 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus F9277_22855 PF03264 NapC/NirT cytochrome c family, N-terminal region F9277_22860 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F9277_22865 PF01568 Molydopterin dinucleotide binding domain F9277_22865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9277_22865 PF00384 Molybdopterin oxidoreductase F9277_22875 PF13187 4Fe-4S dicluster domain F9277_22875 PF12838 4Fe-4S dicluster domain F9277_22880 PF00672 HAMP domain F9277_22880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F9277_22880 PF07730 Histidine kinase F9277_22880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_22885 PF00072 Response regulator receiver domain F9277_22885 PF00196 Bacterial regulatory proteins, luxR family F9277_22900 PF01546 Peptidase family M20/M25/M40 F9277_22900 PF07687 Peptidase dimerisation domain F9277_22905 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9277_22910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_22915 PF00873 AcrB/AcrD/AcrF family F9277_22920 PF00672 HAMP domain F9277_22920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_22920 PF12729 Four helix bundle sensory module for signal transduction F9277_22925 PF00472 RF-1 domain F9277_22930 PF13419 Haloacid dehalogenase-like hydrolase F9277_22935 PF00072 Response regulator receiver domain F9277_22935 PF00196 Bacterial regulatory proteins, luxR family F9277_22960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F9277_22960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_22970 PF00691 OmpA family F9277_22970 PF13488 Glycine zipper F9277_22990 PF00313 'Cold-shock' DNA-binding domain F9277_22995 PF03889 Alternative ribosome-rescue factor A F9277_23005 PF00990 Diguanylate cyclase, GGDEF domain F9277_23020 PF00005 ABC transporter F9277_23020 PF02687 FtsX-like permease family F9277_23020 PF12704 MacB-like periplasmic core domain F9277_23025 PF00005 ABC transporter F9277_23025 PF02687 FtsX-like permease family F9277_23025 PF12704 MacB-like periplasmic core domain F9277_23035 PF04542 Sigma-70 region 2 F9277_23035 PF00140 Sigma-70 factor, region 1.2 F9277_23035 PF04539 Sigma-70 region 3 F9277_23035 PF04545 Sigma-70, region 4 F9277_23045 PF00005 ABC transporter F9277_23050 PF00005 ABC transporter F9277_23050 PF00664 ABC transporter transmembrane region F9277_23055 PF02321 Outer membrane efflux protein F9277_23060 PF00072 Response regulator receiver domain F9277_23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_23065 PF13533 Biotin-lipoyl like F9277_23085 PF00672 HAMP domain F9277_23085 PF17200 Single Cache domain 2 F9277_23085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_23090 PF00210 Ferritin-like domain F9277_23100 PF02016 LD-carboxypeptidase N-terminal domain F9277_23100 PF17676 LD-carboxypeptidase C-terminal domain F9277_23105 PF07995 Glucose / Sorbosone dehydrogenase F9277_23110 PF00465 Iron-containing alcohol dehydrogenase F9277_23125 PF00892 EamA-like transporter family F9277_23135 PF03466 LysR substrate binding domain F9277_23135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_23145 PF00501 AMP-binding enzyme F9277_23145 PF13193 AMP-binding enzyme C-terminal domain F9277_23155 PF00351 Biopterin-dependent aromatic amino acid hydroxylase F9277_23160 PF01329 Pterin 4 alpha carbinolamine dehydratase F9277_23190 PF12843 Putative quorum-sensing-regulated virulence factor F9277_23225 PF12805 FUSC-like inner membrane protein yccS F9277_23230 PF00580 UvrD/REP helicase N-terminal domain F9277_23230 PF13361 UvrD-like helicase C-terminal domain F9277_23230 PF12462 DNA helicase IV / RNA helicase N terminal F9277_23235 PF02142 MGS-like domain F9277_23240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F9277_23245 PF00072 Response regulator receiver domain F9277_23245 PF01627 Hpt domain F9277_23245 PF00512 His Kinase A (phospho-acceptor) domain F9277_23245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_23245 PF00672 HAMP domain F9277_23265 PF00672 HAMP domain F9277_23265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_23265 PF00512 His Kinase A (phospho-acceptor) domain F9277_23265 PF16750 Sensor domain of 2-component histidine kinase F9277_23270 PF00486 Transcriptional regulatory protein, C terminal F9277_23270 PF00072 Response regulator receiver domain F9277_23275 PF00884 Sulfatase F9277_23280 PF00884 Sulfatase F9277_23290 PF17863 AAA lid domain F9277_23290 PF07726 ATPase family associated with various cellular activities (AAA) F9277_23305 PF00092 von Willebrand factor type A domain F9277_23325 PF00119 ATP synthase A chain F9277_23330 PF00137 ATP synthase subunit C F9277_23335 PF00430 ATP synthase B/B' CF(0) F9277_23340 PF00213 ATP synthase delta (OSCP) subunit F9277_23345 PF00306 ATP synthase alpha/beta chain, C terminal domain F9277_23345 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_23345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_23350 PF00231 ATP synthase F9277_23355 PF02874 ATP synthase alpha/beta family, beta-barrel domain F9277_23355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F9277_23360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F9277_23360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F9277_23365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F9277_23365 PF01872 RibD C-terminal domain F9277_23370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_23370 PF03466 LysR substrate binding domain F9277_23375 PF00781 Diacylglycerol kinase catalytic domain F9277_23380 PF04076 Bacterial OB fold (BOF) protein F9277_23395 PF03781 Sulfatase-modifying factor enzyme 1 F9277_23400 PF04055 Radical SAM superfamily F9277_23400 PF13186 Iron-sulfur cluster-binding domain F9277_23410 PF18081 Fanconi anemia-associated nuclease SAP domain F9277_23410 PF08774 VRR-NUC domain F9277_23425 PF01435 Peptidase family M48 F9277_23430 PF04011 LemA family F9277_23435 PF03606 C4-dicarboxylate anaerobic carrier F9277_23455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_23455 PF00072 Response regulator receiver domain F9277_23460 PF00155 Aminotransferase class I and II F9277_23465 PF01926 50S ribosome-binding GTPase F9277_23470 PF01476 LysM domain F9277_23470 PF08525 Opacity-associated protein A N-terminal motif F9277_23470 PF01551 Peptidase family M23 F9277_23490 PF00691 OmpA family F9277_23495 PF01590 GAF domain F9277_23495 PF02954 Bacterial regulatory protein, Fis family F9277_23495 PF00158 Sigma-54 interaction domain F9277_23500 PF17871 AAA lid domain F9277_23500 PF07724 AAA domain (Cdc48 subfamily) F9277_23500 PF00004 ATPase family associated with various cellular activities (AAA) F9277_23500 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_23505 PF05638 Type VI secretion system effector, Hcp F9277_23510 PF04717 Type VI secretion system, phage-baseplate injector F9277_23535 PF00069 Protein kinase domain F9277_23570 PF01037 Lrp/AsnC ligand binding domain F9277_23630 PF13181 Tetratricopeptide repeat F9277_23630 PF17128 Domain of unknown function (DUF5107) F9277_23635 PF00083 Sugar (and other) transporter F9277_23640 PF00480 ROK family F9277_23645 PF01263 Aldose 1-epimerase F9277_23650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F9277_23650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F9277_23655 PF06276 Ferric iron reductase FhuF-like transporter F9277_23655 PF04183 IucA / IucC family F9277_23670 PF02655 ATP-grasp domain F9277_23670 PF00206 Lyase F9277_23675 PF07715 TonB-dependent Receptor Plug Domain F9277_23675 PF00593 TonB dependent receptor F9277_23680 PF07660 Secretin and TonB N terminus short domain F9277_23680 PF07715 TonB-dependent Receptor Plug Domain F9277_23680 PF00593 TonB dependent receptor F9277_23685 PF01497 Periplasmic binding protein F9277_23690 PF01032 FecCD transport family F9277_23695 PF01032 FecCD transport family F9277_23700 PF00005 ABC transporter F9277_23705 PF07715 TonB-dependent Receptor Plug Domain F9277_23705 PF00593 TonB dependent receptor F9277_23715 PF00563 EAL domain F9277_23715 PF00990 Diguanylate cyclase, GGDEF domain F9277_23715 PF03707 Bacterial signalling protein N terminal repeat F9277_23720 PF09456 RcsC Alpha-Beta-Loop (ABL) F9277_23720 PF00512 His Kinase A (phospho-acceptor) domain F9277_23720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_23720 PF00072 Response regulator receiver domain F9277_23725 PF00563 EAL domain F9277_23725 PF00990 Diguanylate cyclase, GGDEF domain F9277_23725 PF03707 Bacterial signalling protein N terminal repeat F9277_23725 PF13188 PAS domain F9277_23730 PF00072 Response regulator receiver domain F9277_23730 PF00196 Bacterial regulatory proteins, luxR family F9277_23735 PF00990 Diguanylate cyclase, GGDEF domain F9277_23740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_23740 PF03466 LysR substrate binding domain F9277_23745 PF00196 Bacterial regulatory proteins, luxR family F9277_23745 PF00072 Response regulator receiver domain F9277_23750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_23750 PF00672 HAMP domain F9277_23755 PF00881 Nitroreductase family F9277_23765 PF00072 Response regulator receiver domain F9277_23765 PF01584 CheW-like domain F9277_23770 PF07963 Prokaryotic N-terminal methylation motif F9277_23770 PF08334 Type II secretion system (T2SS), protein G F9277_23780 PF00892 EamA-like transporter family F9277_23795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F9277_23795 PF00034 Cytochrome c F9277_23805 PF00115 Cytochrome C and Quinol oxidase polypeptide I F9277_23810 PF00034 Cytochrome c F9277_23820 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_23840 PF00682 HMGL-like F9277_23845 PF00378 Enoyl-CoA hydratase/isomerase F9277_23850 PF01039 Carboxyl transferase domain F9277_23855 PF02770 Acyl-CoA dehydrogenase, middle domain F9277_23855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F9277_23855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F9277_23865 PF09278 MerR, DNA binding F9277_23865 PF00376 MerR family regulatory protein F9277_23870 PF00108 Thiolase, N-terminal domain F9277_23870 PF02803 Thiolase, C-terminal domain F9277_23875 PF00171 Aldehyde dehydrogenase family F9277_23885 PF00378 Enoyl-CoA hydratase/isomerase F9277_23890 PF00378 Enoyl-CoA hydratase/isomerase F9277_23895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F9277_23895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F9277_23910 PF06481 COX Aromatic Rich Motif F9277_23910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F9277_23915 PF00115 Cytochrome C and Quinol oxidase polypeptide I F9277_23920 PF00510 Cytochrome c oxidase subunit III F9277_23925 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F9277_23930 PF01040 UbiA prenyltransferase family F9277_23940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9277_23940 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_23945 PF01569 PAP2 superfamily F9277_23960 PF04151 Bacterial pre-peptidase C-terminal domain F9277_23960 PF07504 Fungalysin/Thermolysin Propeptide Motif F9277_23960 PF02868 Thermolysin metallopeptidase, alpha-helical domain F9277_23960 PF01447 Thermolysin metallopeptidase, catalytic domain F9277_23960 PF03413 Peptidase propeptide and YPEB domain F9277_23965 PF00893 Small Multidrug Resistance protein F9277_23970 PF00892 EamA-like transporter family F9277_23990 PF00171 Aldehyde dehydrogenase family F9277_23995 PF00005 ABC transporter F9277_23995 PF00664 ABC transporter transmembrane region F9277_24010 PF01638 HxlR-like helix-turn-helix F9277_24020 PF00929 Exonuclease F9277_24020 PF11490 DNA polymerase III polC-type N-terminus II F9277_24020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F9277_24020 PF02811 PHP domain F9277_24020 PF14579 Helix-hairpin-helix motif F9277_24020 PF07733 Bacterial DNA polymerase III alpha NTPase domain F9277_24185 PF02151 UvrB/uvrC motif F9277_24185 PF12344 Ultra-violet resistance protein B F9277_24185 PF00271 Helicase conserved C-terminal domain F9277_24185 PF17757 UvrB interaction domain F9277_24185 PF04851 Type III restriction enzyme, res subunit F9277_24190 PF02347 Glycine cleavage system P-protein F9277_24195 PF01597 Glycine cleavage H-protein F9277_24200 PF00464 Serine hydroxymethyltransferase F9277_24210 PF01571 Aminomethyltransferase folate-binding domain F9277_24210 PF08669 Glycine cleavage T-protein C-terminal barrel domain F9277_24220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_24225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_24230 PF00873 AcrB/AcrD/AcrF family F9277_24255 PF02378 Phosphotransferase system, EIIC F9277_24255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_24260 PF00294 pfkB family carbohydrate kinase F9277_24265 PF00381 PTS HPr component phosphorylation site F9277_24265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_24270 PF00356 Bacterial regulatory proteins, lacI family F9277_24270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F9277_24285 PF01590 GAF domain F9277_24285 PF00989 PAS fold F9277_24285 PF00563 EAL domain F9277_24285 PF00990 Diguanylate cyclase, GGDEF domain F9277_24290 PF00528 Binding-protein-dependent transport system inner membrane component F9277_24295 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_24300 PF00528 Binding-protein-dependent transport system inner membrane component F9277_24305 PF00005 ABC transporter F9277_24315 PF00465 Iron-containing alcohol dehydrogenase F9277_24320 PF06719 AraC-type transcriptional regulator N-terminus F9277_24320 PF12833 Helix-turn-helix domain F9277_24325 PF06483 Chitinase C F9277_24325 PF00704 Glycosyl hydrolases family 18 F9277_24330 PF00483 Nucleotidyl transferase F9277_24335 PF01268 Formate--tetrahydrofolate ligase F9277_24340 PF00294 pfkB family carbohydrate kinase F9277_24355 PF11849 Domain of unknown function (DUF3369) F9277_24360 PF13419 Haloacid dehalogenase-like hydrolase F9277_24370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_24370 PF00672 HAMP domain F9277_24380 PF04336 Acyl carrier protein phosphodiesterase F9277_24385 PF00270 DEAD/DEAH box helicase F9277_24385 PF00271 Helicase conserved C-terminal domain F9277_24390 PF12792 CSS motif domain associated with EAL F9277_24390 PF00563 EAL domain F9277_24405 PF01292 Prokaryotic cytochrome b561 F9277_24410 PF04264 YceI-like domain F9277_24415 PF01226 Formate/nitrite transporter F9277_24425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_24425 PF03466 LysR substrate binding domain F9277_24430 PF06496 Protein of unknown function (DUF1097) F9277_24435 PF11398 Protein of unknown function (DUF2813) F9277_24440 PF00149 Calcineurin-like phosphoesterase F9277_24440 PF02872 5'-nucleotidase, C-terminal domain F9277_24445 PF03741 Integral membrane protein TerC family F9277_24460 PF02574 Homocysteine S-methyltransferase F9277_24460 PF02607 B12 binding domain F9277_24460 PF00809 Pterin binding enzyme F9277_24460 PF02965 Vitamin B12 dependent methionine synthase, activation domain F9277_24460 PF02310 B12 binding domain F9277_24475 PF12262 Bacterial virulence factor lipase N-terminal F9277_24480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F9277_24495 PF03061 Thioesterase superfamily F9277_24505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_24505 PF12793 Sugar transport-related sRNA regulator N-term F9277_24530 PF00684 DnaJ central domain F9277_24530 PF00226 DnaJ domain F9277_24530 PF01556 DnaJ C terminal domain F9277_24540 PF13188 PAS domain F9277_24540 PF03707 Bacterial signalling protein N terminal repeat F9277_24540 PF00990 Diguanylate cyclase, GGDEF domain F9277_24540 PF00563 EAL domain F9277_24545 PF12241 Trans-2-enoyl-CoA reductase catalytic region F9277_24545 PF07055 Enoyl reductase FAD binding domain F9277_24545 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F9277_24550 PF13472 GDSL-like Lipase/Acylhydrolase family F9277_24555 PF00005 ABC transporter F9277_24570 PF02626 Carboxyltransferase domain, subdomain A and B F9277_24575 PF02682 Carboxyltransferase domain, subdomain C and D F9277_24580 PF03746 LamB/YcsF family F9277_24585 PF08448 PAS fold F9277_24585 PF08447 PAS fold F9277_24585 PF13426 PAS domain F9277_24585 PF00990 Diguanylate cyclase, GGDEF domain F9277_24585 PF00563 EAL domain F9277_24585 PF05231 MASE1 F9277_24590 PF16363 GDP-mannose 4,6 dehydratase F9277_24600 PF07715 TonB-dependent Receptor Plug Domain F9277_24600 PF00593 TonB dependent receptor F9277_24600 PF04886 PT repeat F9277_24605 PF03466 LysR substrate binding domain F9277_24605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_24610 PF00593 TonB dependent receptor F9277_24610 PF04886 PT repeat F9277_24610 PF07715 TonB-dependent Receptor Plug Domain F9277_24615 PF00583 Acetyltransferase (GNAT) family F9277_24615 PF13380 CoA binding domain F9277_24615 PF13607 Succinyl-CoA ligase like flavodoxin domain F9277_24620 PF05036 Sporulation related domain F9277_24625 PF01820 D-ala D-ala ligase N-terminus F9277_24625 PF07478 D-ala D-ala ligase C-terminus F9277_24635 PF01253 Translation initiation factor SUI1 F9277_24645 PF05697 Bacterial trigger factor protein (TF) F9277_24645 PF05698 Bacterial trigger factor protein (TF) C-terminus F9277_24645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F9277_24660 PF03701 Uncharacterised protein family (UPF0181) F9277_24675 PF00486 Transcriptional regulatory protein, C terminal F9277_24675 PF00072 Response regulator receiver domain F9277_24685 PF02233 NAD(P) transhydrogenase beta subunit F9277_24690 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F9277_24690 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F9277_24690 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F9277_24705 PF00990 Diguanylate cyclase, GGDEF domain F9277_24705 PF17158 Membrane-associated sensor, integral membrane domain F9277_24720 PF00563 EAL domain F9277_24720 PF01590 GAF domain F9277_24720 PF00990 Diguanylate cyclase, GGDEF domain F9277_24720 PF00360 Phytochrome region F9277_24730 PF00005 ABC transporter F9277_24730 PF03459 TOBE domain F9277_24735 PF00528 Binding-protein-dependent transport system inner membrane component F9277_24745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F9277_24745 PF07685 CobB/CobQ-like glutamine amidotransferase domain F9277_24750 PF04076 Bacterial OB fold (BOF) protein F9277_24760 PF18030 RimK PreATP-grasp domain F9277_24760 PF08443 RimK-like ATP-grasp domain F9277_24765 PF00155 Aminotransferase class I and II F9277_24770 PF12833 Helix-turn-helix domain F9277_24775 PF01554 MatE F9277_24785 PF13597 Anaerobic ribonucleoside-triphosphate reductase F9277_24785 PF03477 ATP cone domain F9277_24800 PF04143 Sulphur transport F9277_24810 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_24810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F9277_24840 PF07690 Major Facilitator Superfamily F9277_24845 PF00072 Response regulator receiver domain F9277_24845 PF00196 Bacterial regulatory proteins, luxR family F9277_24850 PF05231 MASE1 F9277_24850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_24850 PF07730 Histidine kinase F9277_24855 PF07690 Major Facilitator Superfamily F9277_24860 PF01238 Phosphomannose isomerase type I F9277_24870 PF01594 AI-2E family transporter F9277_24880 PF00529 HlyD membrane-fusion protein of T1SS F9277_24880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_24905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F9277_24905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F9277_24910 PF00085 Thioredoxin F9277_24915 PF07690 Major Facilitator Superfamily F9277_24930 PF11756 Nitrous oxide-stimulated promoter F9277_24945 PF00593 TonB dependent receptor F9277_24945 PF07715 TonB-dependent Receptor Plug Domain F9277_24955 PF03605 Anaerobic c4-dicarboxylate membrane transporter F9277_24970 PF10414 Sirohaem synthase dimerisation region F9277_24970 PF14824 Sirohaem biosynthesis protein central F9277_24970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_24975 PF01226 Formate/nitrite transporter F9277_24980 PF13806 Rieske-like [2Fe-2S] domain F9277_24985 PF04324 BFD-like [2Fe-2S] binding domain F9277_24985 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9277_24985 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_24985 PF18267 Rubredoxin NAD+ reductase C-terminal domain F9277_24985 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9277_24990 PF00990 Diguanylate cyclase, GGDEF domain F9277_24990 PF17152 Periplasmic sensor domain F9277_25045 PF00128 Alpha amylase, catalytic domain F9277_25045 PF09154 Domain of unknown function (DUF1939) F9277_25070 PF13462 Thioredoxin F9277_25080 PF09330 D-lactate dehydrogenase, membrane binding F9277_25080 PF01565 FAD binding domain F9277_25085 PF03466 LysR substrate binding domain F9277_25085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_25095 PF05762 VWA domain containing CoxE-like protein F9277_25100 PF17868 AAA lid domain F9277_25100 PF12592 Protein of unknown function (DUF3763) F9277_25100 PF07728 AAA domain (dynein-related subfamily) F9277_25110 PF01212 Beta-eliminating lyase F9277_25115 PF00034 Cytochrome c F9277_25120 PF03606 C4-dicarboxylate anaerobic carrier F9277_25130 PF07690 Major Facilitator Superfamily F9277_25140 PF08212 Lipocalin-like domain F9277_25175 PF00704 Glycosyl hydrolases family 18 F9277_25185 PF13476 AAA domain F9277_25190 PF12320 Type 5 capsule protein repressor C-terminal domain F9277_25190 PF00149 Calcineurin-like phosphoesterase F9277_25215 PF03527 RHS protein F9277_25230 PF04717 Type VI secretion system, phage-baseplate injector F9277_25240 PF17871 AAA lid domain F9277_25240 PF00004 ATPase family associated with various cellular activities (AAA) F9277_25240 PF07724 AAA domain (Cdc48 subfamily) F9277_25240 PF10431 C-terminal, D2-small domain, of ClpB protein F9277_25300 PF13677 Membrane MotB of proton-channel complex MotA/MotB F9277_25300 PF00691 OmpA family F9277_25320 PF00069 Protein kinase domain F9277_25320 PF03793 PASTA domain F9277_25345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_25350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F9277_25360 PF01757 Acyltransferase family F9277_25375 PF13187 4Fe-4S dicluster domain F9277_25375 PF01645 Conserved region in glutamate synthase F9277_25385 PF00753 Metallo-beta-lactamase superfamily F9277_25390 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F9277_25465 PF00072 Response regulator receiver domain F9277_25465 PF00990 Diguanylate cyclase, GGDEF domain F9277_25470 PF00378 Enoyl-CoA hydratase/isomerase F9277_25475 PF01594 AI-2E family transporter F9277_25480 PF12464 Maltose acetyltransferase F9277_25480 PF14602 Hexapeptide repeat of succinyl-transferase F9277_25490 PF02743 Cache domain F9277_25490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_25490 PF00672 HAMP domain F9277_25500 PF01292 Prokaryotic cytochrome b561 F9277_25510 PF01476 LysM domain F9277_25510 PF08525 Opacity-associated protein A N-terminal motif F9277_25510 PF01551 Peptidase family M23 F9277_25515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_25515 PF03466 LysR substrate binding domain F9277_25530 PF00072 Response regulator receiver domain F9277_25530 PF00211 Adenylate and Guanylate cyclase catalytic domain F9277_25560 PF13806 Rieske-like [2Fe-2S] domain F9277_25560 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_25560 PF04324 BFD-like [2Fe-2S] binding domain F9277_25560 PF18267 Rubredoxin NAD+ reductase C-terminal domain F9277_25560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F9277_25560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F9277_25565 PF00005 ABC transporter F9277_25570 PF00528 Binding-protein-dependent transport system inner membrane component F9277_25575 PF00005 ABC transporter F9277_25585 PF03861 ANTAR domain F9277_25585 PF08376 Nitrate and nitrite sensing F9277_25590 PF01738 Dienelactone hydrolase family F9277_25595 PF00591 Glycosyl transferase family, a/b domain F9277_25595 PF02885 Glycosyl transferase family, helical bundle domain F9277_25600 PF10414 Sirohaem synthase dimerisation region F9277_25600 PF14824 Sirohaem biosynthesis protein central F9277_25600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F9277_25605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9277_25605 PF00384 Molybdopterin oxidoreductase F9277_25605 PF01568 Molydopterin dinucleotide binding domain F9277_25610 PF00583 Acetyltransferase (GNAT) family F9277_25615 PF00563 EAL domain F9277_25615 PF00990 Diguanylate cyclase, GGDEF domain F9277_25615 PF08448 PAS fold F9277_25620 PF03222 Tryptophan/tyrosine permease family F9277_25630 PF00990 Diguanylate cyclase, GGDEF domain F9277_25630 PF08448 PAS fold F9277_25640 PF01483 Proprotein convertase P-domain F9277_25640 PF00082 Subtilase family F9277_25650 PF00245 Alkaline phosphatase F9277_25665 PF00486 Transcriptional regulatory protein, C terminal F9277_25665 PF00072 Response regulator receiver domain F9277_25695 PF04314 Copper chaperone PCu(A)C F9277_25700 PF00012 Hsp70 protein F9277_25715 PF00676 Dehydrogenase E1 component F9277_25720 PF02780 Transketolase, C-terminal domain F9277_25720 PF02779 Transketolase, pyrimidine binding domain F9277_25725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F9277_25725 PF00364 Biotin-requiring enzyme F9277_25725 PF02817 e3 binding domain F9277_25730 PF00766 Electron transfer flavoprotein FAD-binding domain F9277_25730 PF01012 Electron transfer flavoprotein domain F9277_25735 PF01012 Electron transfer flavoprotein domain F9277_25745 PF02424 ApbE family F9277_25750 PF04205 FMN-binding domain F9277_25750 PF00890 FAD binding domain F9277_25750 PF03358 NADPH-dependent FMN reductase F9277_25760 PF13417 Glutathione S-transferase, N-terminal domain F9277_25760 PF00043 Glutathione S-transferase, C-terminal domain F9277_25765 PF03466 LysR substrate binding domain F9277_25765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_25775 PF00528 Binding-protein-dependent transport system inner membrane component F9277_25780 PF00528 Binding-protein-dependent transport system inner membrane component F9277_25785 PF00497 Bacterial extracellular solute-binding proteins, family 3 F9277_25790 PF00005 ABC transporter F9277_25795 PF02743 Cache domain F9277_25795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_25795 PF00672 HAMP domain F9277_25825 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_25835 PF00171 Aldehyde dehydrogenase family F9277_25845 PF03466 LysR substrate binding domain F9277_25845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_25850 PF00871 Acetokinase family F9277_25855 PF03707 Bacterial signalling protein N terminal repeat F9277_25855 PF00990 Diguanylate cyclase, GGDEF domain F9277_25855 PF00563 EAL domain F9277_25860 PF03880 DbpA RNA binding domain F9277_25860 PF00270 DEAD/DEAH box helicase F9277_25860 PF00271 Helicase conserved C-terminal domain F9277_25885 PF07825 Excisionase-like protein F9277_25895 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain F9277_25895 PF00589 Phage integrase family F9277_25920 PF12102 Domain of unknown function (DUF3578) F9277_25920 PF07728 AAA domain (dynein-related subfamily) F9277_25945 PF01420 Type I restriction modification DNA specificity domain F9277_25950 PF02384 N-6 DNA Methylase F9277_25955 PF08463 EcoEI R protein C-terminal F9277_25955 PF04851 Type III restriction enzyme, res subunit F9277_25955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F9277_25955 PF00271 Helicase conserved C-terminal domain F9277_26005 PF13086 AAA domain F9277_26005 PF13195 Protein of unknown function (DUF4011) F9277_26005 PF13087 AAA domain F9277_26025 PF00773 RNB domain F9277_26025 PF00575 S1 RNA binding domain F9277_26025 PF08206 Ribonuclease B OB domain F9277_26030 PF12833 Helix-turn-helix domain F9277_26040 PF12849 PBP superfamily domain F9277_26045 PF01575 MaoC like domain F9277_26055 PF00512 His Kinase A (phospho-acceptor) domain F9277_26055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_26055 PF00672 HAMP domain F9277_26055 PF16527 Two-component sensor protein CpxA, periplasmic domain F9277_26060 PF00072 Response regulator receiver domain F9277_26060 PF00486 Transcriptional regulatory protein, C terminal F9277_26065 PF08534 Redoxin F9277_26070 PF08534 Redoxin F9277_26075 PF00892 EamA-like transporter family F9277_26080 PF00005 ABC transporter F9277_26085 PF00563 EAL domain F9277_26085 PF00196 Bacterial regulatory proteins, luxR family F9277_26105 PF00270 DEAD/DEAH box helicase F9277_26105 PF00271 Helicase conserved C-terminal domain F9277_26110 PF00990 Diguanylate cyclase, GGDEF domain F9277_26110 PF05231 MASE1 F9277_26110 PF00563 EAL domain F9277_26110 PF08447 PAS fold F9277_26110 PF08448 PAS fold F9277_26110 PF13426 PAS domain F9277_26115 PF07683 Cobalamin synthesis protein cobW C-terminal domain F9277_26115 PF02492 CobW/HypB/UreG, nucleotide-binding domain F9277_26125 PF01470 Pyroglutamyl peptidase F9277_26140 PF00593 TonB dependent receptor F9277_26140 PF07715 TonB-dependent Receptor Plug Domain F9277_26150 PF13411 MerR HTH family regulatory protein F9277_26155 PF00005 ABC transporter F9277_26160 PF01032 FecCD transport family F9277_26165 PF01032 FecCD transport family F9277_26170 PF01497 Periplasmic binding protein F9277_26185 PF01048 Phosphorylase superfamily F9277_26190 PF04973 Nicotinamide mononucleotide transporter F9277_26200 PF00356 Bacterial regulatory proteins, lacI family F9277_26205 PF00294 pfkB family carbohydrate kinase F9277_26210 PF13407 Periplasmic binding protein domain F9277_26215 PF02653 Branched-chain amino acid transport system / permease component F9277_26220 PF00005 ABC transporter F9277_26225 PF05025 RbsD / FucU transport protein family F9277_26230 PF00563 EAL domain F9277_26230 PF00990 Diguanylate cyclase, GGDEF domain F9277_26235 PF01048 Phosphorylase superfamily F9277_26240 PF01177 Asp/Glu/Hydantoin racemase F9277_26265 PF09335 SNARE associated Golgi protein F9277_26290 PF04116 Fatty acid hydroxylase superfamily F9277_26305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_26305 PF00512 His Kinase A (phospho-acceptor) domain F9277_26305 PF09308 LuxQ, periplasmic F9277_26305 PF00072 Response regulator receiver domain F9277_26310 PF03150 Di-haem cytochrome c peroxidase F9277_26310 PF00034 Cytochrome c F9277_26315 PF00072 Response regulator receiver domain F9277_26315 PF09308 LuxQ, periplasmic F9277_26315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_26315 PF00512 His Kinase A (phospho-acceptor) domain F9277_26320 PF03707 Bacterial signalling protein N terminal repeat F9277_26320 PF00990 Diguanylate cyclase, GGDEF domain F9277_26320 PF00563 EAL domain F9277_26335 PF01145 SPFH domain / Band 7 family F9277_26335 PF16200 C-terminal region of band_7 F9277_26345 PF00881 Nitroreductase family F9277_26350 PF00571 CBS domain F9277_26350 PF00005 ABC transporter F9277_26355 PF00528 Binding-protein-dependent transport system inner membrane component F9277_26360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F9277_26365 PF00732 GMC oxidoreductase F9277_26365 PF05199 GMC oxidoreductase F9277_26370 PF00171 Aldehyde dehydrogenase family F9277_26375 PF00440 Bacterial regulatory proteins, tetR family F9277_26375 PF13977 BetI-type transcriptional repressor, C-terminal F9277_26385 PF07694 5TMR of 5TMR-LYT F9277_26385 PF00990 Diguanylate cyclase, GGDEF domain F9277_26410 PF01553 Acyltransferase F9277_26440 PF13488 Glycine zipper F9277_26440 PF00691 OmpA family F9277_26475 PF00437 Type II/IV secretion system protein F9277_26480 PF10609 NUBPL iron-transfer P-loop NTPase F9277_26490 PF00263 Bacterial type II and III secretion system protein F9277_26490 PF04972 BON domain F9277_26490 PF13629 Pilus formation protein N terminal region F9277_26510 PF03466 LysR substrate binding domain F9277_26510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_26515 PF12146 Serine aminopeptidase, S33 F9277_26525 PF00478 IMP dehydrogenase / GMP reductase domain F9277_26530 PF03853 YjeF-related protein N-terminus F9277_26530 PF01256 Carbohydrate kinase F9277_26540 PF00072 Response regulator receiver domain F9277_26545 PF00248 Aldo/keto reductase family F9277_26560 PF00654 Voltage gated chloride channel F9277_26570 PF01566 Natural resistance-associated macrophage protein F9277_26580 PF01227 GTP cyclohydrolase I F9277_26590 PF03454 MoeA C-terminal region (domain IV) F9277_26590 PF00994 Probable molybdopterin binding domain F9277_26590 PF03453 MoeA N-terminal region (domain I and II) F9277_26595 PF00899 ThiF family F9277_26615 PF00581 Rhodanese-like domain F9277_26620 PF00990 Diguanylate cyclase, GGDEF domain F9277_26620 PF03707 Bacterial signalling protein N terminal repeat F9277_26620 PF00563 EAL domain F9277_26625 PF08329 Chitinase A, N-terminal domain F9277_26625 PF00704 Glycosyl hydrolases family 18 F9277_26640 PF00923 Transaldolase/Fructose-6-phosphate aldolase F9277_26645 PF02779 Transketolase, pyrimidine binding domain F9277_26645 PF02780 Transketolase, C-terminal domain F9277_26645 PF00456 Transketolase, thiamine diphosphate binding domain F9277_26650 PF00672 HAMP domain F9277_26650 PF12729 Four helix bundle sensory module for signal transduction F9277_26650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_26655 PF07690 Major Facilitator Superfamily F9277_26660 PF00793 DAHP synthetase I family F9277_26665 PF00691 OmpA family F9277_26665 PF01389 OmpA-like transmembrane domain F9277_26675 PF01040 UbiA prenyltransferase family F9277_26680 PF02628 Cytochrome oxidase assembly protein F9277_26700 PF00510 Cytochrome c oxidase subunit III F9277_26705 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 F9277_26710 PF00115 Cytochrome C and Quinol oxidase polypeptide I F9277_26715 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F9277_26715 PF02790 Cytochrome C oxidase subunit II, transmembrane domain F9277_26720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F9277_26720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F9277_26720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F9277_26720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F9277_26730 PF01810 LysE type translocator F9277_26750 PF01557 Fumarylacetoacetate (FAA) hydrolase family F9277_26765 PF00892 EamA-like transporter family F9277_26770 PF00462 Glutaredoxin F9277_26785 PF07690 Major Facilitator Superfamily F9277_26790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_26790 PF03466 LysR substrate binding domain F9277_26795 PF08448 PAS fold F9277_26795 PF00563 EAL domain F9277_26795 PF00990 Diguanylate cyclase, GGDEF domain F9277_26795 PF08447 PAS fold F9277_26800 PF01476 LysM domain F9277_26800 PF08525 Opacity-associated protein A N-terminal motif F9277_26800 PF01551 Peptidase family M23 F9277_26830 PF02743 Cache domain F9277_26830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_26830 PF00672 HAMP domain F9277_26840 PF03222 Tryptophan/tyrosine permease family F9277_26875 PF08240 Alcohol dehydrogenase GroES-like domain F9277_26875 PF00107 Zinc-binding dehydrogenase F9277_26880 PF02378 Phosphotransferase system, EIIC F9277_26880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_26885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_26890 PF07702 UTRA domain F9277_26890 PF00392 Bacterial regulatory proteins, gntR family F9277_26895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F9277_26895 PF02378 Phosphotransferase system, EIIC F9277_26895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F9277_26900 PF09261 Alpha mannosidase middle domain F9277_26900 PF07748 Glycosyl hydrolases family 38 C-terminal domain F9277_26900 PF01074 Glycosyl hydrolases family 38 N-terminal domain F9277_26905 PF01238 Phosphomannose isomerase type I F9277_26910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F9277_26920 PF01638 HxlR-like helix-turn-helix F9277_26935 PF01758 Sodium Bile acid symporter family F9277_26950 PF01161 Phosphatidylethanolamine-binding protein F9277_26955 PF02567 Phenazine biosynthesis-like protein F9277_26960 PF02525 Flavodoxin-like fold F9277_26965 PF02254 TrkA-N domain F9277_26965 PF00999 Sodium/hydrogen exchanger family F9277_26975 PF03466 LysR substrate binding domain F9277_26975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_27005 PF03466 LysR substrate binding domain F9277_27005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_27025 PF02801 Beta-ketoacyl synthase, C-terminal domain F9277_27025 PF14765 Polyketide synthase dehydratase F9277_27025 PF00550 Phosphopantetheine attachment site F9277_27025 PF00698 Acyl transferase domain F9277_27025 PF08240 Alcohol dehydrogenase GroES-like domain F9277_27025 PF00109 Beta-ketoacyl synthase, N-terminal domain F9277_27025 PF00107 Zinc-binding dehydrogenase F9277_27025 PF08659 KR domain F9277_27025 PF16197 Ketoacyl-synthetase C-terminal extension F9277_27030 PF00128 Alpha amylase, catalytic domain F9277_27050 PF01584 CheW-like domain F9277_27050 PF00072 Response regulator receiver domain F9277_27060 PF01243 Pyridoxamine 5'-phosphate oxidase F9277_27065 PF06228 Haem utilisation ChuX/HutX F9277_27070 PF04055 Radical SAM superfamily F9277_27075 PF03544 Gram-negative bacterial TonB protein C-terminal F9277_27080 PF01618 MotA/TolQ/ExbB proton channel family F9277_27085 PF02472 Biopolymer transport protein ExbD/TolR F9277_27095 PF01032 FecCD transport family F9277_27100 PF00005 ABC transporter F9277_27105 PF17200 Single Cache domain 2 F9277_27105 PF00672 HAMP domain F9277_27105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_27115 PF00005 ABC transporter F9277_27125 PF01042 Endoribonuclease L-PSP F9277_27135 PF00728 Glycosyl hydrolase family 20, catalytic domain F9277_27135 PF02838 Glycosyl hydrolase family 20, domain 2 F9277_27140 PF01081 KDPG and KHG aldolase F9277_27145 PF00294 pfkB family carbohydrate kinase F9277_27150 PF00474 Sodium:solute symporter family F9277_27160 PF07969 Amidohydrolase family F9277_27170 PF01380 SIS domain F9277_27170 PF01418 Helix-turn-helix domain, rpiR family F9277_27170 PF02685 Glucokinase F9277_27185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F9277_27185 PF12838 4Fe-4S dicluster domain F9277_27185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F9277_27185 PF00384 Molybdopterin oxidoreductase F9277_27185 PF01568 Molydopterin dinucleotide binding domain F9277_27205 PF00873 AcrB/AcrD/AcrF family F9277_27225 PF00583 Acetyltransferase (GNAT) family F9277_27225 PF13673 Acetyltransferase (GNAT) domain F9277_27245 PF00675 Insulinase (Peptidase family M16) F9277_27245 PF05193 Peptidase M16 inactive domain F9277_27250 PF00005 ABC transporter F9277_27250 PF06472 ABC transporter transmembrane region 2 F9277_27255 PF07715 TonB-dependent Receptor Plug Domain F9277_27265 PF01618 MotA/TolQ/ExbB proton channel family F9277_27270 PF01618 MotA/TolQ/ExbB proton channel family F9277_27275 PF02472 Biopolymer transport protein ExbD/TolR F9277_27290 PF00293 NUDIX domain F9277_27300 PF03150 Di-haem cytochrome c peroxidase F9277_27300 PF00034 Cytochrome c F9277_27300 PF14376 Haem-binding domain F9277_27310 PF13302 Acetyltransferase (GNAT) domain F9277_27320 PF00326 Prolyl oligopeptidase family F9277_27320 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F9277_27325 PF00005 ABC transporter F9277_27325 PF16326 ABC transporter C-terminal domain F9277_27325 PF12848 ABC transporter F9277_27330 PF01980 tRNA-methyltransferase O F9277_27350 PF07690 Major Facilitator Superfamily F9277_27365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_27365 PF03466 LysR substrate binding domain F9277_27370 PF00582 Universal stress protein family F9277_27380 PF00455 DeoR C terminal sensor domain F9277_27380 PF08220 DeoR-like helix-turn-helix domain F9277_27385 PF03009 Glycerophosphoryl diester phosphodiesterase family F9277_27390 PF13416 Bacterial extracellular solute-binding protein F9277_27395 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27400 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27405 PF17912 MalK OB fold domain F9277_27405 PF00005 ABC transporter F9277_27420 PF01047 MarR family F9277_27435 PF02492 CobW/HypB/UreG, nucleotide-binding domain F9277_27435 PF07683 Cobalamin synthesis protein cobW C-terminal domain F9277_27440 PF00132 Bacterial transferase hexapeptide (six repeats) F9277_27445 PF01979 Amidohydrolase family F9277_27455 PF01734 Patatin-like phospholipase F9277_27465 PF05726 Pirin C-terminal cupin domain F9277_27465 PF02678 Pirin F9277_27470 PF00313 'Cold-shock' DNA-binding domain F9277_27485 PF00962 Adenosine/AMP deaminase F9277_27490 PF00990 Diguanylate cyclase, GGDEF domain F9277_27490 PF17151 Periplasmic sensor domain F9277_27495 PF03466 LysR substrate binding domain F9277_27495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_27510 PF08534 Redoxin F9277_27510 PF00462 Glutaredoxin F9277_27515 PF08241 Methyltransferase domain F9277_27525 PF08448 PAS fold F9277_27525 PF00990 Diguanylate cyclase, GGDEF domain F9277_27530 PF00768 D-alanyl-D-alanine carboxypeptidase F9277_27530 PF07943 Penicillin-binding protein 5, C-terminal domain F9277_27540 PF02028 BCCT, betaine/carnitine/choline family transporter F9277_27545 PF02525 Flavodoxin-like fold F9277_27550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_27550 PF03466 LysR substrate binding domain F9277_27555 PF02798 Glutathione S-transferase, N-terminal domain F9277_27560 PF02909 Tetracyclin repressor-like, C-terminal domain F9277_27560 PF00440 Bacterial regulatory proteins, tetR family F9277_27565 PF01872 RibD C-terminal domain F9277_27575 PF00291 Pyridoxal-phosphate dependent enzyme F9277_27650 PF00106 short chain dehydrogenase F9277_27660 PF00375 Sodium:dicarboxylate symporter family F9277_27665 PF07992 Pyridine nucleotide-disulphide oxidoreductase F9277_27675 PF00127 Copper binding proteins, plastocyanin/azurin family F9277_27680 PF02378 Phosphotransferase system, EIIC F9277_27685 PF03707 Bacterial signalling protein N terminal repeat F9277_27685 PF00990 Diguanylate cyclase, GGDEF domain F9277_27685 PF00563 EAL domain F9277_27695 PF00691 OmpA family F9277_27720 PF00005 ABC transporter F9277_27725 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27730 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27735 PF12849 PBP superfamily domain F9277_27740 PF02743 Cache domain F9277_27740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F9277_27740 PF00512 His Kinase A (phospho-acceptor) domain F9277_27745 PF01966 HD domain F9277_27745 PF00072 Response regulator receiver domain F9277_27750 PF14602 Hexapeptide repeat of succinyl-transferase F9277_27750 PF12464 Maltose acetyltransferase F9277_27755 PF00529 HlyD membrane-fusion protein of T1SS F9277_27760 PF00005 ABC transporter F9277_27760 PF00664 ABC transporter transmembrane region F9277_27770 PF00196 Bacterial regulatory proteins, luxR family F9277_27775 PF00196 Bacterial regulatory proteins, luxR family F9277_27785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_27785 PF00672 HAMP domain F9277_27785 PF02743 Cache domain F9277_27790 PF17863 AAA lid domain F9277_27790 PF07726 ATPase family associated with various cellular activities (AAA) F9277_27795 PF01882 Protein of unknown function DUF58 F9277_27805 PF13519 von Willebrand factor type A domain F9277_27810 PF13519 von Willebrand factor type A domain F9277_27825 PF00005 ABC transporter F9277_27830 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27835 PF00528 Binding-protein-dependent transport system inner membrane component F9277_27840 PF12849 PBP superfamily domain F9277_27845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_27845 PF00672 HAMP domain F9277_27845 PF02743 Cache domain F9277_27865 PF07715 TonB-dependent Receptor Plug Domain F9277_27865 PF00593 TonB dependent receptor F9277_27870 PF00326 Prolyl oligopeptidase family F9277_27870 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F9277_27880 PF00270 DEAD/DEAH box helicase F9277_27880 PF00271 Helicase conserved C-terminal domain F9277_27890 PF17969 L,D-transpeptidase C-terminal domain F9277_27890 PF03734 L,D-transpeptidase catalytic domain F9277_27890 PF01476 LysM domain F9277_27895 PF00875 DNA photolyase F9277_27895 PF03441 FAD binding domain of DNA photolyase F9277_27900 PF13411 MerR HTH family regulatory protein F9277_27905 PF08349 Protein of unknown function (DUF1722) F9277_27915 PF01048 Phosphorylase superfamily F9277_27930 PF00990 Diguanylate cyclase, GGDEF domain F9277_27940 PF11742 Protein of unknown function (DUF3302) F9277_27945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F9277_27945 PF00529 HlyD membrane-fusion protein of T1SS F9277_27950 PF07155 ECF-type riboflavin transporter, S component F9277_27955 PF00005 ABC transporter F9277_27955 PF12558 ATP-binding cassette cobalt transporter F9277_27970 PF01022 Bacterial regulatory protein, arsR family F9277_27975 PF12837 4Fe-4S binding domain F9277_27975 PF12801 4Fe-4S binding domain F9277_27980 PF12800 4Fe-4S binding domain F9277_27980 PF12838 4Fe-4S dicluster domain F9277_27985 PF13302 Acetyltransferase (GNAT) domain F9277_28000 PF12945 Flagellar protein YcgR F9277_28000 PF07238 PilZ domain F9277_28005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_28005 PF12729 Four helix bundle sensory module for signal transduction F9277_28005 PF00672 HAMP domain F9277_28010 PF12729 Four helix bundle sensory module for signal transduction F9277_28010 PF00672 HAMP domain F9277_28010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F9277_28015 PF13654 AAA domain F9277_28015 PF05362 Lon protease (S16) C-terminal proteolytic domain F9277_28025 PF00005 ABC transporter F9277_28025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F9277_28030 PF00326 Prolyl oligopeptidase family F9277_28030 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F9277_28035 PF03466 LysR substrate binding domain F9277_28035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28040 PF02652 L-lactate permease F9277_28045 PF01070 FMN-dependent dehydrogenase F9277_28055 PF00924 Mechanosensitive ion channel F9277_28060 PF03466 LysR substrate binding domain F9277_28060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F9277_28070 PF13378 Enolase C-terminal domain-like F9277_28080 PF03764 Elongation factor G, domain IV F9277_28080 PF03144 Elongation factor Tu domain 2 F9277_28080 PF14492 Elongation Factor G, domain II F9277_28080 PF00679 Elongation factor G C-terminus F9277_28080 PF00009 Elongation factor Tu GTP binding domain F9277_28100 PF02001 Protein of unknown function DUF134 F9277_28110 PF00528 Binding-protein-dependent transport system inner membrane component F9277_28115 PF00571 CBS domain F9277_28115 PF00005 ABC transporter F9277_28130 PF01048 Phosphorylase superfamily F9277_28135 PF00582 Universal stress protein family F9277_28140 PF03466 LysR substrate binding domain F9277_28140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28165 PF06942 GlpM protein F9277_28180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F9277_28180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F9277_28190 PF00857 Isochorismatase family F9277_28195 PF00080 Copper/zinc superoxide dismutase (SODC) F9277_28205 PF06628 Catalase-related immune-responsive F9277_28205 PF00199 Catalase F9277_28225 PF01238 Phosphomannose isomerase type I F9277_28230 PF00155 Aminotransferase class I and II F9277_28235 PF00367 phosphotransferase system, EIIB F9277_28235 PF02378 Phosphotransferase system, EIIC F9277_28240 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F9277_28240 PF00356 Bacterial regulatory proteins, lacI family F9277_28245 PF00455 DeoR C terminal sensor domain F9277_28245 PF08220 DeoR-like helix-turn-helix domain F9277_28250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F9277_28255 PF01625 Peptide methionine sulfoxide reductase F9277_28255 PF01641 SelR domain F9277_28265 PF00367 phosphotransferase system, EIIB F9277_28265 PF02378 Phosphotransferase system, EIIC F9277_28270 PF01546 Peptidase family M20/M25/M40 F9277_28275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F9277_28280 PF00456 Transketolase, thiamine diphosphate binding domain F9277_28280 PF02779 Transketolase, pyrimidine binding domain F9277_28280 PF02780 Transketolase, C-terminal domain F9277_28285 PF00923 Transaldolase/Fructose-6-phosphate aldolase F9277_28290 PF13419 Haloacid dehalogenase-like hydrolase F9277_28295 PF00465 Iron-containing alcohol dehydrogenase F9277_28310 PF00455 DeoR C terminal sensor domain F9277_28310 PF08220 DeoR-like helix-turn-helix domain F9277_28325 PF07971 Glycosyl hydrolase family 92 F9277_28325 PF17678 Glycosyl hydrolase family 92 N-terminal domain F9277_28330 PF17678 Glycosyl hydrolase family 92 N-terminal domain F9277_28330 PF07971 Glycosyl hydrolase family 92 F9277_28340 PF07971 Glycosyl hydrolase family 92 F9277_28340 PF17678 Glycosyl hydrolase family 92 N-terminal domain F9277_28345 PF07971 Glycosyl hydrolase family 92 F9277_28345 PF17678 Glycosyl hydrolase family 92 N-terminal domain F9277_28355 PF03466 LysR substrate binding domain F9277_28355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28360 PF01810 LysE type translocator F9277_28365 PF00581 Rhodanese-like domain F9277_28380 PF13977 BetI-type transcriptional repressor, C-terminal F9277_28380 PF00440 Bacterial regulatory proteins, tetR family F9277_28385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28385 PF03466 LysR substrate binding domain F9277_28400 PF12848 ABC transporter F9277_28400 PF00005 ABC transporter F9277_28405 PF13409 Glutathione S-transferase, N-terminal domain F9277_28410 PF03358 NADPH-dependent FMN reductase F9277_28415 PF03466 LysR substrate binding domain F9277_28415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F9277_28420 PF09905 DNA-binding protein VF530 F9277_28425 PF00005 ABC transporter F9277_28425 PF12848 ABC transporter F9277_28440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily