locus-tag class description LWM38_00005 PF00308 Bacterial dnaA protein LWM38_00005 PF08299 Bacterial dnaA protein helix-turn-helix LWM38_00005 PF11638 DnaA N-terminal domain LWM38_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LWM38_00010 PF02767 DNA polymerase III beta subunit, central domain LWM38_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LWM38_00015 PF02463 RecF/RecN/SMC N terminal domain LWM38_00020 PF01751 Toprim domain LWM38_00020 PF18053 DNA gyrase B subunit insert domain LWM38_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_00020 PF00204 DNA gyrase B LWM38_00020 PF00986 DNA gyrase B subunit, carboxyl terminus LWM38_00025 PF00011 Hsp20/alpha crystallin family LWM38_00030 PF00155 Aminotransferase class I and II LWM38_00035 PF00128 Alpha amylase, catalytic domain LWM38_00040 PF05746 DALR anticodon binding domain LWM38_00040 PF02092 Glycyl-tRNA synthetase beta subunit LWM38_00045 PF02091 Glycyl-tRNA synthetase alpha subunit LWM38_00050 PF01169 Uncharacterized protein family UPF0016 LWM38_00060 PF01206 Sulfurtransferase TusA LWM38_00070 PF03466 LysR substrate binding domain LWM38_00070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_00075 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_00075 PF00107 Zinc-binding dehydrogenase LWM38_00080 PF02803 Thiolase, C-terminal domain LWM38_00080 PF00108 Thiolase, N-terminal domain LWM38_00085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LWM38_00085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LWM38_00085 PF00378 Enoyl-CoA hydratase/isomerase LWM38_00090 PF09186 Domain of unknown function (DUF1949) LWM38_00090 PF01205 Uncharacterized protein family UPF0029 LWM38_00095 PF02386 Cation transport protein LWM38_00100 PF12724 Flavodoxin domain LWM38_00140 PF00394 Multicopper oxidase LWM38_00140 PF07731 Multicopper oxidase LWM38_00140 PF07732 Multicopper oxidase LWM38_00140 PF10518 TAT (twin-arginine translocation) pathway signal sequence LWM38_00145 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LWM38_00150 PF13667 ThiC-associated domain LWM38_00150 PF01964 Radical SAM ThiC family LWM38_00155 PF02581 Thiamine monophosphate synthase LWM38_00160 PF00899 ThiF family LWM38_00165 PF02597 ThiS family LWM38_00170 PF05690 Thiazole biosynthesis protein ThiG LWM38_00175 PF06968 Biotin and Thiamin Synthesis associated domain LWM38_00175 PF04055 Radical SAM superfamily LWM38_00180 PF01321 Creatinase/Prolidase N-terminal domain LWM38_00180 PF00557 Metallopeptidase family M24 LWM38_00180 PF01321 Creatinase/Prolidase N-terminal domain LWM38_00180 PF00557 Metallopeptidase family M24 LWM38_00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_00185 PF03466 LysR substrate binding domain LWM38_00190 PF07690 Major Facilitator Superfamily LWM38_00210 PF05114 Protein of unknown function (DUF692) LWM38_00220 PF00580 UvrD/REP helicase N-terminal domain LWM38_00220 PF13361 UvrD-like helicase C-terminal domain LWM38_00225 PF08534 Redoxin LWM38_00235 PF01810 LysE type translocator LWM38_00240 PF02311 AraC-like ligand binding domain LWM38_00240 PF12833 Helix-turn-helix domain LWM38_00245 PF00892 EamA-like transporter family LWM38_00250 PF09382 RQC domain LWM38_00250 PF16124 RecQ zinc-binding LWM38_00250 PF00570 HRDC domain LWM38_00250 PF00270 DEAD/DEAH box helicase LWM38_00250 PF00271 Helicase conserved C-terminal domain LWM38_00260 PF02592 Putative vitamin uptake transporter LWM38_00265 PF02541 Ppx/GppA phosphatase family LWM38_00270 PF00270 DEAD/DEAH box helicase LWM38_00270 PF00271 Helicase conserved C-terminal domain LWM38_00275 PF00085 Thioredoxin LWM38_00280 PF07497 Rho termination factor, RNA-binding domain LWM38_00280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LWM38_00280 PF07498 Rho termination factor, N-terminal domain LWM38_00290 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LWM38_00295 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_00295 PF00175 Oxidoreductase NAD-binding domain LWM38_00300 PF00175 Oxidoreductase NAD-binding domain LWM38_00365 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LWM38_00370 PF02602 Uroporphyrinogen-III synthase HemD LWM38_00375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LWM38_00375 PF03900 Porphobilinogen deaminase, C-terminal domain LWM38_00380 PF01295 Adenylate cyclase, class-I LWM38_00380 PF12633 Adenylate cyclase NT domain LWM38_00385 PF01491 Frataxin-like domain LWM38_00395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LWM38_00395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LWM38_00400 PF01678 Diaminopimelate epimerase LWM38_00410 PF02899 Phage integrase, N-terminal SAM-like domain LWM38_00410 PF00589 Phage integrase family LWM38_00415 PF13419 Haloacid dehalogenase-like hydrolase LWM38_00420 PF00563 EAL domain LWM38_00420 PF08495 FIST N domain LWM38_00420 PF10442 FIST C domain LWM38_00420 PF00990 Diguanylate cyclase, GGDEF domain LWM38_00425 PF03942 DTW domain LWM38_00445 PF12146 Serine aminopeptidase, S33 LWM38_00450 PF01810 LysE type translocator LWM38_00455 PF00563 EAL domain LWM38_00455 PF08668 HDOD domain LWM38_00460 PF01022 Bacterial regulatory protein, arsR family LWM38_00465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LWM38_00465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LWM38_00500 PF01914 MarC family integral membrane protein LWM38_00515 PF00448 SRP54-type protein, GTPase domain LWM38_00515 PF02881 SRP54-type protein, helical bundle domain LWM38_00520 PF00005 ABC transporter LWM38_00525 PF18075 FtsX extracellular domain LWM38_00530 PF04545 Sigma-70, region 4 LWM38_00530 PF04542 Sigma-70 region 2 LWM38_00530 PF00140 Sigma-70 factor, region 1.2 LWM38_00535 PF00581 Rhodanese-like domain LWM38_00540 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LWM38_00540 PF01694 Rhomboid family LWM38_00545 PF03748 Flagellar basal body-associated protein FliL LWM38_00550 PF04345 Chorismate lyase LWM38_00555 PF01040 UbiA prenyltransferase family LWM38_00560 PF01553 Acyltransferase LWM38_00565 PF01219 Prokaryotic diacylglycerol kinase LWM38_00570 PF01726 LexA DNA binding domain LWM38_00570 PF00717 Peptidase S24-like LWM38_00575 PF04072 Leucine carboxyl methyltransferase LWM38_00580 PF01554 MatE LWM38_00585 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_00585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LWM38_00590 PF00440 Bacterial regulatory proteins, tetR family LWM38_00610 PF05958 tRNA (Uracil-5-)-methyltransferase LWM38_00615 PF07715 TonB-dependent Receptor Plug Domain LWM38_00615 PF00593 TonB dependent receptor LWM38_00625 PF01177 Asp/Glu/Hydantoin racemase LWM38_00720 PF13091 PLD-like domain LWM38_00730 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LWM38_00730 PF01565 FAD binding domain LWM38_00735 PF03099 Biotin/lipoate A/B protein ligase family LWM38_00735 PF08279 HTH domain LWM38_00735 PF02237 Biotin protein ligase C terminal domain LWM38_00740 PF00485 Phosphoribulokinase / Uridine kinase family LWM38_00765 PF00009 Elongation factor Tu GTP binding domain LWM38_00765 PF03144 Elongation factor Tu domain 2 LWM38_00765 PF03143 Elongation factor Tu C-terminal domain LWM38_00770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LWM38_00775 PF02357 Transcription termination factor nusG LWM38_00775 PF00467 KOW motif LWM38_00780 PF03946 Ribosomal protein L11, N-terminal domain LWM38_00780 PF00298 Ribosomal protein L11, RNA binding domain LWM38_00785 PF00687 Ribosomal protein L1p/L10e family LWM38_00790 PF00466 Ribosomal protein L10 LWM38_00795 PF16320 Ribosomal protein L7/L12 dimerisation domain LWM38_00795 PF00542 Ribosomal protein L7/L12 C-terminal domain LWM38_00800 PF04563 RNA polymerase beta subunit LWM38_00800 PF04565 RNA polymerase Rpb2, domain 3 LWM38_00800 PF00562 RNA polymerase Rpb2, domain 6 LWM38_00800 PF04560 RNA polymerase Rpb2, domain 7 LWM38_00800 PF04561 RNA polymerase Rpb2, domain 2 LWM38_00800 PF10385 RNA polymerase beta subunit external 1 domain LWM38_00805 PF04997 RNA polymerase Rpb1, domain 1 LWM38_00805 PF00623 RNA polymerase Rpb1, domain 2 LWM38_00805 PF04983 RNA polymerase Rpb1, domain 3 LWM38_00805 PF05000 RNA polymerase Rpb1, domain 4 LWM38_00805 PF04998 RNA polymerase Rpb1, domain 5 LWM38_00810 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LWM38_00815 PF00293 NUDIX domain LWM38_00815 PF09297 NADH pyrophosphatase zinc ribbon domain LWM38_00820 PF01208 Uroporphyrinogen decarboxylase (URO-D) LWM38_00825 PF03167 Uracil DNA glycosylase superfamily LWM38_00835 PF04222 Protein of unknown function (DUF416) LWM38_00840 PF01595 Cyclin M transmembrane N-terminal domain LWM38_00840 PF00571 CBS domain LWM38_00845 PF00216 Bacterial DNA-binding protein LWM38_00855 PF02844 Phosphoribosylglycinamide synthetase, N domain LWM38_00855 PF02843 Phosphoribosylglycinamide synthetase, C domain LWM38_00855 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LWM38_00860 PF02142 MGS-like domain LWM38_00860 PF01808 AICARFT/IMPCHase bienzyme LWM38_00865 PF13411 MerR HTH family regulatory protein LWM38_00870 PF02954 Bacterial regulatory protein, Fis family LWM38_00875 PF01207 Dihydrouridine synthase (Dus) LWM38_00885 PF02785 Biotin carboxylase C-terminal domain LWM38_00885 PF00289 Biotin carboxylase, N-terminal domain LWM38_00885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LWM38_00890 PF00364 Biotin-requiring enzyme LWM38_00895 PF01220 Dehydroquinase class II LWM38_00900 PF00501 AMP-binding enzyme LWM38_00900 PF13193 AMP-binding enzyme C-terminal domain LWM38_00900 PF16177 Acetyl-coenzyme A synthetase N-terminus LWM38_00915 PF12832 MFS_1 like family LWM38_00920 PF00672 HAMP domain LWM38_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_00920 PF00512 His Kinase A (phospho-acceptor) domain LWM38_00920 PF00072 Response regulator receiver domain LWM38_00920 PF01627 Hpt domain LWM38_00925 PF00206 Lyase LWM38_00925 PF10415 Fumarase C C-terminus LWM38_00935 PF00474 Sodium:solute symporter family LWM38_00945 PF03471 Transporter associated domain LWM38_00945 PF00999 Sodium/hydrogen exchanger family LWM38_00945 PF02080 TrkA-C domain LWM38_00950 PF00196 Bacterial regulatory proteins, luxR family LWM38_00950 PF00072 Response regulator receiver domain LWM38_00955 PF02683 Cytochrome C biogenesis protein transmembrane region LWM38_00955 PF11412 Disulphide bond corrector protein DsbC LWM38_00960 PF02863 Arginine repressor, C-terminal domain LWM38_00960 PF01316 Arginine repressor, DNA binding domain LWM38_00965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LWM38_00965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LWM38_00970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LWM38_00970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LWM38_00975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LWM38_00975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LWM38_00980 PF00696 Amino acid kinase family LWM38_00990 PF03606 C4-dicarboxylate anaerobic carrier LWM38_00995 PF03605 Anaerobic c4-dicarboxylate membrane transporter LWM38_01000 PF10415 Fumarase C C-terminus LWM38_01000 PF00206 Lyase LWM38_01005 PF04186 FxsA cytoplasmic membrane protein LWM38_01010 PF00588 SpoU rRNA Methylase family LWM38_01015 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LWM38_01015 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LWM38_01020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_01020 PF00672 HAMP domain LWM38_01020 PF00512 His Kinase A (phospho-acceptor) domain LWM38_01020 PF16527 Two-component sensor protein CpxA, periplasmic domain LWM38_01025 PF00486 Transcriptional regulatory protein, C terminal LWM38_01025 PF00072 Response regulator receiver domain LWM38_01035 PF16916 Dimerisation domain of Zinc Transporter LWM38_01035 PF01545 Cation efflux family LWM38_01040 PF00365 Phosphofructokinase LWM38_01045 PF00121 Triosephosphate isomerase LWM38_01055 PF05656 Protein of unknown function (DUF805) LWM38_01060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_01075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LWM38_01080 PF06005 Cell division protein ZapB LWM38_01085 PF03737 Aldolase/RraA LWM38_01090 PF01040 UbiA prenyltransferase family LWM38_01095 PF07724 AAA domain (Cdc48 subfamily) LWM38_01095 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_01100 PF00227 Proteasome subunit LWM38_01110 PF00356 Bacterial regulatory proteins, lacI family LWM38_01115 PF00270 DEAD/DEAH box helicase LWM38_01115 PF00271 Helicase conserved C-terminal domain LWM38_01115 PF17764 3′ DNA-binding domain (3′BD) LWM38_01115 PF18074 Primosomal protein N C-terminal domain LWM38_01115 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LWM38_01120 PF01197 Ribosomal protein L31 LWM38_01125 PF03949 Malic enzyme, NAD binding domain LWM38_01125 PF00390 Malic enzyme, N-terminal domain LWM38_01130 PF01340 Met Apo-repressor, MetJ LWM38_01135 PF01053 Cys/Met metabolism PLP-dependent enzyme LWM38_01140 PF00696 Amino acid kinase family LWM38_01140 PF00742 Homoserine dehydrogenase LWM38_01140 PF03447 Homoserine dehydrogenase, NAD binding domain LWM38_01145 PF02219 Methylenetetrahydrofolate reductase LWM38_01155 PF00311 Phosphoenolpyruvate carboxylase LWM38_01160 PF01546 Peptidase family M20/M25/M40 LWM38_01160 PF07687 Peptidase dimerisation domain LWM38_01165 PF01118 Semialdehyde dehydrogenase, NAD binding domain LWM38_01165 PF02774 Semialdehyde dehydrogenase, dimerisation domain LWM38_01170 PF00696 Amino acid kinase family LWM38_01175 PF00764 Arginosuccinate synthase LWM38_01180 PF00583 Acetyltransferase (GNAT) family LWM38_01180 PF14698 Argininosuccinate lyase C-terminal LWM38_01180 PF00206 Lyase LWM38_01190 PF01042 Endoribonuclease L-PSP LWM38_01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_01195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LWM38_01200 PF08534 Redoxin LWM38_01200 PF00462 Glutaredoxin LWM38_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_01205 PF03466 LysR substrate binding domain LWM38_01210 PF17092 Penicillin-binding protein OB-like domain LWM38_01210 PF00912 Transglycosylase LWM38_01210 PF00905 Penicillin binding protein transpeptidase domain LWM38_01235 PF11741 AMIN domain LWM38_01235 PF00263 Bacterial type II and III secretion system protein LWM38_01235 PF03958 Bacterial type II/III secretion system short domain LWM38_01235 PF07660 Secretin and TonB N terminus short domain LWM38_01240 PF01202 Shikimate kinase LWM38_01245 PF01761 3-dehydroquinate synthase LWM38_01255 PF02086 D12 class N6 adenine-specific DNA methyltransferase LWM38_01260 PF00834 Ribulose-phosphate 3 epimerase family LWM38_01265 PF13419 Haloacid dehalogenase-like hydrolase LWM38_01270 PF00579 tRNA synthetases class I (W and Y) LWM38_01280 PF00117 Glutamine amidotransferase class-I LWM38_01285 PF00202 Aminotransferase class-III LWM38_01290 PF04958 Arginine N-succinyltransferase beta subunit LWM38_01295 PF00171 Aldehyde dehydrogenase family LWM38_01305 PF13545 Crp-like helix-turn-helix domain LWM38_01305 PF00027 Cyclic nucleotide-binding domain LWM38_01310 PF00485 Phosphoribulokinase / Uridine kinase family LWM38_01315 PF06794 Uncharacterised protein family (UPF0270) LWM38_01320 PF00561 alpha/beta hydrolase fold LWM38_01330 PF12848 ABC transporter LWM38_01330 PF00005 ABC transporter LWM38_01335 PF02525 Flavodoxin-like fold LWM38_01340 PF02254 TrkA-N domain LWM38_01340 PF00999 Sodium/hydrogen exchanger family LWM38_01350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_01355 PF01112 Asparaginase LWM38_01360 PF04102 SlyX LWM38_01370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LWM38_01370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_01375 PF08348 YheO-like PAS domain LWM38_01375 PF13309 HTH domain LWM38_01380 PF02635 DsrE/DsrF-like family LWM38_01385 PF02635 DsrE/DsrF-like family LWM38_01395 PF00164 Ribosomal protein S12/S23 LWM38_01400 PF00177 Ribosomal protein S7p/S5e LWM38_01405 PF00679 Elongation factor G C-terminus LWM38_01405 PF14492 Elongation Factor G, domain II LWM38_01405 PF03764 Elongation factor G, domain IV LWM38_01405 PF00009 Elongation factor Tu GTP binding domain LWM38_01405 PF03144 Elongation factor Tu domain 2 LWM38_01410 PF03144 Elongation factor Tu domain 2 LWM38_01410 PF00009 Elongation factor Tu GTP binding domain LWM38_01410 PF03143 Elongation factor Tu C-terminal domain LWM38_01415 PF00338 Ribosomal protein S10p/S20e LWM38_01420 PF00297 Ribosomal protein L3 LWM38_01425 PF00573 Ribosomal protein L4/L1 family LWM38_01430 PF00276 Ribosomal protein L23 LWM38_01435 PF00181 Ribosomal Proteins L2, RNA binding domain LWM38_01435 PF03947 Ribosomal Proteins L2, C-terminal domain LWM38_01440 PF00203 Ribosomal protein S19 LWM38_01445 PF00237 Ribosomal protein L22p/L17e LWM38_01450 PF00189 Ribosomal protein S3, C-terminal domain LWM38_01450 PF07650 KH domain LWM38_01455 PF00252 Ribosomal protein L16p/L10e LWM38_01460 PF00831 Ribosomal L29 protein LWM38_01465 PF00366 Ribosomal protein S17 LWM38_01470 PF00238 Ribosomal protein L14p/L23e LWM38_01475 PF00467 KOW motif LWM38_01475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LWM38_01480 PF00281 Ribosomal protein L5 LWM38_01480 PF00673 ribosomal L5P family C-terminus LWM38_01485 PF00253 Ribosomal protein S14p/S29e LWM38_01490 PF00410 Ribosomal protein S8 LWM38_01495 PF00347 Ribosomal protein L6 LWM38_01500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LWM38_01505 PF03719 Ribosomal protein S5, C-terminal domain LWM38_01505 PF00333 Ribosomal protein S5, N-terminal domain LWM38_01510 PF00327 Ribosomal protein L30p/L7e LWM38_01515 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LWM38_01520 PF00344 SecY translocase LWM38_01525 PF00444 Ribosomal protein L36 LWM38_01530 PF00416 Ribosomal protein S13/S18 LWM38_01535 PF00411 Ribosomal protein S11 LWM38_01540 PF00163 Ribosomal protein S4/S9 N-terminal domain LWM38_01540 PF01479 S4 domain LWM38_01545 PF01000 RNA polymerase Rpb3/RpoA insert domain LWM38_01545 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LWM38_01545 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LWM38_01550 PF01196 Ribosomal protein L17 LWM38_01560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_01560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LWM38_01565 PF08525 Opacity-associated protein A N-terminal motif LWM38_01565 PF04225 Opacity-associated protein A LysM-like domain LWM38_01575 PF13673 Acetyltransferase (GNAT) domain LWM38_01605 PF08443 RimK-like ATP-grasp domain LWM38_01605 PF08245 Mur ligase middle domain LWM38_01605 PF02875 Mur ligase family, glutamate ligase domain LWM38_01615 PF00149 Calcineurin-like phosphoesterase LWM38_01615 PF02872 5'-nucleotidase, C-terminal domain LWM38_01620 PF01507 Phosphoadenosine phosphosulfate reductase family LWM38_01625 PF00009 Elongation factor Tu GTP binding domain LWM38_01630 PF02080 TrkA-C domain LWM38_01630 PF03600 Citrate transporter LWM38_01655 PF00005 ABC transporter LWM38_01665 PF10795 Protein of unknown function (DUF2607) LWM38_01670 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LWM38_01675 PF06526 Protein of unknown function (DUF1107) LWM38_01680 PF01625 Peptide methionine sulfoxide reductase LWM38_01685 PF17243 POTRA domain TamA domain 1 LWM38_01685 PF01103 Surface antigen LWM38_01685 PF07244 Surface antigen variable number repeat LWM38_01690 PF04357 TamB, inner membrane protein subunit of TAM complex LWM38_01695 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LWM38_01700 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LWM38_01705 PF08245 Mur ligase middle domain LWM38_01705 PF01225 Mur ligase family, catalytic domain LWM38_01705 PF02875 Mur ligase family, glutamate ligase domain LWM38_01710 PF02441 Flavoprotein LWM38_01720 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_01725 PF00005 ABC transporter LWM38_01730 PF04751 Protein of unknown function (DUF615) LWM38_01735 PF01523 Putative modulator of DNA gyrase LWM38_01740 PF00571 CBS domain LWM38_01740 PF01769 Divalent cation transporter LWM38_01740 PF03448 MgtE intracellular N domain LWM38_01745 PF00381 PTS HPr component phosphorylation site LWM38_01750 PF03668 P-loop ATPase protein family LWM38_01755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LWM38_01760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LWM38_01765 PF00309 Sigma-54 factor, Activator interacting domain (AID) LWM38_01765 PF04963 Sigma-54 factor, core binding domain LWM38_01765 PF04552 Sigma-54, DNA binding domain LWM38_01770 PF00005 ABC transporter LWM38_01770 PF12399 Branched-chain amino acid ATP-binding cassette transporter LWM38_01775 PF03968 OstA-like protein LWM38_01790 PF00571 CBS domain LWM38_01790 PF01380 SIS domain LWM38_01795 PF01699 Sodium/calcium exchanger protein LWM38_01800 PF00005 ABC transporter LWM38_01805 PF02405 Permease MlaE LWM38_01810 PF02470 MlaD protein LWM38_01815 PF05494 MlaC protein LWM38_01825 PF01722 BolA-like protein LWM38_01830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LWM38_01835 PF01553 Acyltransferase LWM38_01840 PF01042 Endoribonuclease L-PSP LWM38_01845 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LWM38_01845 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LWM38_01850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LWM38_01850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LWM38_01855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LWM38_01855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LWM38_01865 PF06877 Regulator of ribonuclease activity B LWM38_01875 PF00583 Acetyltransferase (GNAT) family LWM38_01885 PF00133 tRNA synthetases class I (I, L, M and V) LWM38_01885 PF10458 Valyl tRNA synthetase tRNA binding arm LWM38_01885 PF08264 Anticodon-binding domain of tRNA LWM38_01890 PF04364 DNA polymerase III chi subunit, HolC LWM38_01895 PF00883 Cytosol aminopeptidase family, catalytic domain LWM38_01895 PF02789 Cytosol aminopeptidase family, N-terminal domain LWM38_01900 PF03739 Lipopolysaccharide export system permease LptF/LptG LWM38_01905 PF03739 Lipopolysaccharide export system permease LptF/LptG LWM38_01935 PF01548 Transposase LWM38_01935 PF02371 Transposase IS116/IS110/IS902 family LWM38_01940 PF00589 Phage integrase family LWM38_01940 PF02899 Phage integrase, N-terminal SAM-like domain LWM38_02005 PF03707 Bacterial signalling protein N terminal repeat LWM38_02005 PF00990 Diguanylate cyclase, GGDEF domain LWM38_02005 PF00563 EAL domain LWM38_02010 PF00072 Response regulator receiver domain LWM38_02010 PF00672 HAMP domain LWM38_02010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_02010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LWM38_02010 PF00512 His Kinase A (phospho-acceptor) domain LWM38_02010 PF01627 Hpt domain LWM38_02015 PF00990 Diguanylate cyclase, GGDEF domain LWM38_02015 PF00360 Phytochrome region LWM38_02015 PF00563 EAL domain LWM38_02015 PF01590 GAF domain LWM38_02040 PF00072 Response regulator receiver domain LWM38_02135 PF00672 HAMP domain LWM38_02135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_02135 PF17200 Single Cache domain 2 LWM38_02175 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LWM38_02175 PF01464 Transglycosylase SLT domain LWM38_02180 PF04362 Bacterial Fe(2+) trafficking LWM38_02185 PF00633 Helix-hairpin-helix motif LWM38_02185 PF00730 HhH-GPD superfamily base excision DNA repair protein LWM38_02185 PF14815 NUDIX domain LWM38_02190 PF02390 Putative methyltransferase LWM38_02195 PF04960 Glutaminase LWM38_02200 PF06969 HemN C-terminal domain LWM38_02200 PF04055 Radical SAM superfamily LWM38_02205 PF01725 Ham1 family LWM38_02215 PF02594 Uncharacterised ACR, YggU family COG1872 LWM38_02220 PF02325 YGGT family LWM38_02225 PF14748 Pyrroline-5-carboxylate reductase dimerisation LWM38_02225 PF03807 NADP oxidoreductase coenzyme F420-dependent LWM38_02230 PF01168 Alanine racemase, N-terminal domain LWM38_02235 PF00437 Type II/IV secretion system protein LWM38_02240 PF00437 Type II/IV secretion system protein LWM38_02245 PF03652 Holliday junction resolvase LWM38_02250 PF02622 Uncharacterized ACR, COG1678 LWM38_02255 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LWM38_02255 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LWM38_02260 PF04452 RNA methyltransferase LWM38_02265 PF04231 Endonuclease I LWM38_02270 PF10263 SprT-like family LWM38_02270 PF17283 SprT-like zinc ribbon domain LWM38_02280 PF02773 S-adenosylmethionine synthetase, C-terminal domain LWM38_02280 PF00438 S-adenosylmethionine synthetase, N-terminal domain LWM38_02280 PF02772 S-adenosylmethionine synthetase, central domain LWM38_02290 PF00456 Transketolase, thiamine diphosphate binding domain LWM38_02290 PF02780 Transketolase, C-terminal domain LWM38_02290 PF02779 Transketolase, pyrimidine binding domain LWM38_02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_02295 PF03466 LysR substrate binding domain LWM38_02300 PF00593 TonB dependent receptor LWM38_02300 PF07715 TonB-dependent Receptor Plug Domain LWM38_02305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LWM38_02305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LWM38_02310 PF00162 Phosphoglycerate kinase LWM38_02315 PF01116 Fructose-bisphosphate aldolase class-II LWM38_02320 PF05552 Conserved TM helix LWM38_02320 PF00924 Mechanosensitive ion channel LWM38_02335 PF01810 LysE type translocator LWM38_02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_02340 PF03466 LysR substrate binding domain LWM38_02350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_02350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_02350 PF01842 ACT domain LWM38_02355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LWM38_02360 PF01812 5-formyltetrahydrofolate cyclo-ligase family LWM38_02370 PF05164 Cell division protein ZapA LWM38_02375 PF03695 Uncharacterised protein family (UPF0149) LWM38_02380 PF01494 FAD binding domain LWM38_02385 PF01494 FAD binding domain LWM38_02395 PF03129 Anticodon binding domain LWM38_02395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LWM38_02395 PF04073 Aminoacyl-tRNA editing domain LWM38_02405 PF03937 Flavinator of succinate dehydrogenase LWM38_02410 PF02910 Fumarate reductase flavoprotein C-term LWM38_02410 PF00890 FAD binding domain LWM38_02415 PF08281 Sigma-70, region 4 LWM38_02415 PF04542 Sigma-70 region 2 LWM38_02420 PF03873 Anti sigma-E protein RseA, C-terminal domain LWM38_02420 PF03872 Anti sigma-E protein RseA, N-terminal domain LWM38_02425 PF03888 MucB/RseB N-terminal domain LWM38_02425 PF17188 MucB/RseB C-terminal domain LWM38_02435 PF00679 Elongation factor G C-terminus LWM38_02435 PF00009 Elongation factor Tu GTP binding domain LWM38_02435 PF03144 Elongation factor Tu domain 2 LWM38_02435 PF06421 GTP-binding protein LepA C-terminus LWM38_02440 PF10502 Signal peptidase, peptidase S26 LWM38_02445 PF00035 Double-stranded RNA binding motif LWM38_02445 PF14622 Ribonuclease-III-like LWM38_02450 PF07650 KH domain LWM38_02450 PF01926 50S ribosome-binding GTPase LWM38_02455 PF11967 Recombination protein O N terminal LWM38_02455 PF02565 Recombination protein O C terminal LWM38_02460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LWM38_02465 PF01648 4'-phosphopantetheinyl transferase superfamily LWM38_02470 PF00672 HAMP domain LWM38_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_02470 PF00512 His Kinase A (phospho-acceptor) domain LWM38_02470 PF01627 Hpt domain LWM38_02470 PF00072 Response regulator receiver domain LWM38_02470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LWM38_02475 PF05958 tRNA (Uracil-5-)-methyltransferase LWM38_02475 PF01938 TRAM domain LWM38_02480 PF13291 ACT domain LWM38_02480 PF04607 Region found in RelA / SpoT proteins LWM38_02480 PF02824 TGS domain LWM38_02485 PF03819 MazG nucleotide pyrophosphohydrolase domain LWM38_02490 PF06418 CTP synthase N-terminus LWM38_02490 PF00117 Glutamine amidotransferase class-I LWM38_02495 PF00113 Enolase, C-terminal TIM barrel domain LWM38_02495 PF03952 Enolase, N-terminal domain LWM38_02500 PF04977 Septum formation initiator LWM38_02505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LWM38_02510 PF02542 YgbB family LWM38_02515 PF01142 tRNA pseudouridine synthase D (TruD) LWM38_02520 PF01975 Survival protein SurE LWM38_02530 PF01476 LysM domain LWM38_02530 PF01551 Peptidase family M23 LWM38_02535 PF00140 Sigma-70 factor, region 1.2 LWM38_02535 PF04542 Sigma-70 region 2 LWM38_02535 PF04539 Sigma-70 region 3 LWM38_02535 PF04545 Sigma-70, region 4 LWM38_02540 PF01624 MutS domain I LWM38_02540 PF05188 MutS domain II LWM38_02540 PF05192 MutS domain III LWM38_02540 PF05190 MutS family domain IV LWM38_02540 PF00488 MutS domain V LWM38_02545 PF02464 Competence-damaged protein LWM38_02550 PF00154 recA bacterial DNA recombination protein LWM38_02555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LWM38_02555 PF02272 DHHA1 domain LWM38_02555 PF01411 tRNA synthetases class II (A) LWM38_02560 PF00696 Amino acid kinase family LWM38_02560 PF01842 ACT domain LWM38_02560 PF13840 ACT domain LWM38_02565 PF02599 Global regulator protein family LWM38_02620 PF04277 Oxaloacetate decarboxylase, gamma chain LWM38_02625 PF02436 Conserved carboxylase domain LWM38_02625 PF00364 Biotin-requiring enzyme LWM38_02625 PF00682 HMGL-like LWM38_02630 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LWM38_02635 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_02635 PF00107 Zinc-binding dehydrogenase LWM38_02640 PF09335 SNARE associated Golgi protein LWM38_02645 PF00675 Insulinase (Peptidase family M16) LWM38_02645 PF05193 Peptidase M16 inactive domain LWM38_02650 PF04262 Glutamate-cysteine ligase LWM38_02660 PF02664 S-Ribosylhomocysteinase (LuxS) LWM38_02665 PF01595 Cyclin M transmembrane N-terminal domain LWM38_02665 PF00571 CBS domain LWM38_02665 PF03471 Transporter associated domain LWM38_02670 PF01578 Cytochrome C assembly protein LWM38_02675 PF02881 SRP54-type protein, helical bundle domain LWM38_02675 PF02978 Signal peptide binding domain LWM38_02675 PF00448 SRP54-type protein, GTPase domain LWM38_02680 PF00886 Ribosomal protein S16 LWM38_02685 PF05239 PRC-barrel domain LWM38_02685 PF01782 RimM N-terminal domain LWM38_02690 PF01746 tRNA (Guanine-1)-methyltransferase LWM38_02695 PF01245 Ribosomal protein L19 LWM38_02700 PF03884 DNA gyrase inhibitor YacG LWM38_02705 PF07072 Cell division protein LWM38_02710 PF01121 Dephospho-CoA kinase LWM38_02715 PF01478 Type IV leader peptidase family LWM38_02715 PF06750 Bacterial Peptidase A24 N-terminal domain LWM38_02720 PF00482 Type II secretion system (T2SS), protein F LWM38_02725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LWM38_02725 PF00437 Type II/IV secretion system protein LWM38_02730 PF00114 Pilin (bacterial filament) LWM38_02730 PF07963 Prokaryotic N-terminal methylation motif LWM38_02735 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LWM38_02735 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LWM38_02740 PF01510 N-acetylmuramoyl-L-alanine amidase LWM38_02745 PF07729 FCD domain LWM38_02745 PF00392 Bacterial regulatory proteins, gntR family LWM38_02750 PF00456 Transketolase, thiamine diphosphate binding domain LWM38_02750 PF17831 Pyruvate dehydrogenase E1 component middle domain LWM38_02755 PF02817 e3 binding domain LWM38_02755 PF00364 Biotin-requiring enzyme LWM38_02755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LWM38_02760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LWM38_02760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_02765 PF00440 Bacterial regulatory proteins, tetR family LWM38_02770 PF00156 Phosphoribosyl transferase domain LWM38_02775 PF00484 Carbonic anhydrase LWM38_02780 PF01740 STAS domain LWM38_02780 PF00916 Sulfate permease family LWM38_02785 PF00005 ABC transporter LWM38_02790 PF01061 ABC-2 type transporter LWM38_02795 PF02569 Pantoate-beta-alanine ligase LWM38_02800 PF02548 Ketopantoate hydroxymethyltransferase LWM38_02805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LWM38_02810 PF12627 Probable RNA and SrmB- binding site of polymerase A LWM38_02810 PF12626 Polymerase A arginine-rich C-terminus LWM38_02810 PF01743 Poly A polymerase head domain LWM38_02815 PF00749 tRNA synthetases class I (E and Q), catalytic domain LWM38_02820 PF01258 Prokaryotic dksA/traR C4-type zinc finger LWM38_02825 PF17746 SfsA N-terminal OB domain LWM38_02825 PF03749 Sugar fermentation stimulation protein RE domain LWM38_02830 PF00270 DEAD/DEAH box helicase LWM38_02830 PF00271 Helicase conserved C-terminal domain LWM38_02830 PF04408 Helicase associated domain (HA2) LWM38_02830 PF08482 ATP-dependent helicase C-terminal LWM38_02835 PF00912 Transglycosylase LWM38_02835 PF14814 Bifunctional transglycosylase second domain LWM38_02835 PF00905 Penicillin binding protein transpeptidase domain LWM38_02840 PF01734 Patatin-like phospholipase LWM38_02845 PF11791 Aconitate B N-terminal domain LWM38_02845 PF06434 Aconitate hydratase 2 N-terminus LWM38_02845 PF00330 Aconitase family (aconitate hydratase) LWM38_02850 PF06062 Uncharacterised protein family (UPF0231) LWM38_02855 PF00543 Nitrogen regulatory protein P-II LWM38_02860 PF00909 Ammonium Transporter Family LWM38_02865 PF13416 Bacterial extracellular solute-binding protein LWM38_02875 PF00005 ABC transporter LWM38_02880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LWM38_02880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LWM38_02880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LWM38_02880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LWM38_02885 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LWM38_02885 PF06165 Glycosyltransferase family 36 LWM38_02890 PF00728 Glycosyl hydrolase family 20, catalytic domain LWM38_02890 PF02838 Glycosyl hydrolase family 20, domain 2 LWM38_02895 PF01869 BadF/BadG/BcrA/BcrD ATPase family LWM38_02905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_02905 PF00005 ABC transporter LWM38_02910 PF00005 ABC transporter LWM38_02910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_02915 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_02915 PF12911 N-terminal TM domain of oligopeptide transport permease C LWM38_02920 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_02925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_02930 PF17149 Periplasmic sensor domain found in signal transduction proteins LWM38_02930 PF00672 HAMP domain LWM38_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_02930 PF00512 His Kinase A (phospho-acceptor) domain LWM38_02930 PF01627 Hpt domain LWM38_02930 PF00072 Response regulator receiver domain LWM38_02935 PF08468 Methyltransferase small domain N-terminal LWM38_02935 PF05175 Methyltransferase small domain LWM38_02940 PF01594 AI-2E family transporter LWM38_02945 PF00202 Aminotransferase class-III LWM38_02950 PF01521 Iron-sulphur cluster biosynthesis LWM38_02960 PF00873 AcrB/AcrD/AcrF family LWM38_02965 PF01476 LysM domain LWM38_02965 PF01551 Peptidase family M23 LWM38_02965 PF08525 Opacity-associated protein A N-terminal motif LWM38_02970 PF00579 tRNA synthetases class I (W and Y) LWM38_02975 PF03448 MgtE intracellular N domain LWM38_02975 PF01769 Divalent cation transporter LWM38_02975 PF00571 CBS domain LWM38_02980 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LWM38_02985 PF13609 Gram-negative porin LWM38_02990 PF01272 Transcription elongation factor, GreA/GreB, C-term LWM38_02990 PF03449 Transcription elongation factor, N-terminal LWM38_02995 PF01985 CRS1 / YhbY (CRM) domain LWM38_03000 PF01728 FtsJ-like methyltransferase LWM38_03005 PF01434 Peptidase family M41 LWM38_03005 PF06480 FtsH Extracellular LWM38_03005 PF17862 AAA+ lid domain LWM38_03005 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_03010 PF00809 Pterin binding enzyme LWM38_03015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LWM38_03015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LWM38_03015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LWM38_03015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LWM38_03020 PF03840 Preprotein translocase SecG subunit LWM38_03035 PF17384 RimP C-terminal SH3 domain LWM38_03035 PF02576 RimP N-terminal domain LWM38_03040 PF13184 NusA-like KH domain LWM38_03040 PF00575 S1 RNA binding domain LWM38_03040 PF08529 NusA N-terminal domain LWM38_03045 PF04760 Translation initiation factor IF-2, N-terminal region LWM38_03045 PF08364 Bacterial translation initiation factor IF-2 associated region LWM38_03045 PF11987 Translation-initiation factor 2 LWM38_03045 PF00009 Elongation factor Tu GTP binding domain LWM38_03050 PF02033 Ribosome-binding factor A LWM38_03055 PF01509 TruB family pseudouridylate synthase (N terminal domain) LWM38_03055 PF16198 tRNA pseudouridylate synthase B C-terminal domain LWM38_03055 PF09157 Pseudouridine synthase II TruB, C-terminal LWM38_03060 PF00312 Ribosomal protein S15 LWM38_03065 PF01138 3' exoribonuclease family, domain 1 LWM38_03065 PF03725 3' exoribonuclease family, domain 2 LWM38_03065 PF00575 S1 RNA binding domain LWM38_03065 PF00013 KH domain LWM38_03065 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LWM38_03070 PF13181 Tetratricopeptide repeat LWM38_03070 PF07719 Tetratricopeptide repeat LWM38_03080 PF01554 MatE LWM38_03085 PF01136 Peptidase family U32 LWM38_03090 PF01136 Peptidase family U32 LWM38_03095 PF00563 EAL domain LWM38_03095 PF03707 Bacterial signalling protein N terminal repeat LWM38_03095 PF00990 Diguanylate cyclase, GGDEF domain LWM38_03100 PF02036 SCP-2 sterol transfer family LWM38_03105 PF13508 Acetyltransferase (GNAT) domain LWM38_03115 PF00583 Acetyltransferase (GNAT) family LWM38_03120 PF16658 Class II release factor RF3, C-terminal domain LWM38_03120 PF00009 Elongation factor Tu GTP binding domain LWM38_03120 PF03144 Elongation factor Tu domain 2 LWM38_03130 PF01026 TatD related DNase LWM38_03135 PF07662 Na+ dependent nucleoside transporter C-terminus LWM38_03135 PF07670 Nucleoside recognition LWM38_03135 PF01773 Na+ dependent nucleoside transporter N-terminus LWM38_03140 PF01791 DeoC/LacD family aldolase LWM38_03145 PF00591 Glycosyl transferase family, a/b domain LWM38_03145 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LWM38_03145 PF02885 Glycosyl transferase family, helical bundle domain LWM38_03150 PF01676 Metalloenzyme superfamily LWM38_03155 PF01048 Phosphorylase superfamily LWM38_03165 PF18429 Domain of unknown function (DUF5609) LWM38_03175 PF18073 Rubredoxin metal binding domain LWM38_03180 PF00009 Elongation factor Tu GTP binding domain LWM38_03180 PF00679 Elongation factor G C-terminus LWM38_03180 PF03144 Elongation factor Tu domain 2 LWM38_03180 PF14492 Elongation Factor G, domain II LWM38_03180 PF03764 Elongation factor G, domain IV LWM38_03185 PF09905 DNA-binding protein VF530 LWM38_03190 PF03466 LysR substrate binding domain LWM38_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_03200 PF00501 AMP-binding enzyme LWM38_03205 PF02311 AraC-like ligand binding domain LWM38_03205 PF12833 Helix-turn-helix domain LWM38_03230 PF13629 Pilus formation protein N terminal region LWM38_03230 PF00263 Bacterial type II and III secretion system protein LWM38_03230 PF04972 BON domain LWM38_03260 PF00437 Type II/IV secretion system protein LWM38_03290 PF02417 Chromate transporter LWM38_03295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_03295 PF03466 LysR substrate binding domain LWM38_03300 PF03553 Na+/H+ antiporter family LWM38_03305 PF01184 GPR1/FUN34/yaaH family LWM38_03310 PF01235 Sodium:alanine symporter family LWM38_03315 PF01553 Acyltransferase LWM38_03335 PF08443 RimK-like ATP-grasp domain LWM38_03335 PF18030 RimK PreATP-grasp domain LWM38_03345 PF01668 SmpB protein LWM38_03350 PF03364 Polyketide cyclase / dehydrase and lipid transport LWM38_03355 PF03658 RnfH family Ubiquitin LWM38_03360 PF04355 SmpA / OmlA family LWM38_03365 PF02463 RecF/RecN/SMC N terminal domain LWM38_03370 PF01513 ATP-NAD kinase LWM38_03375 PF01025 GrpE LWM38_03380 PF00375 Sodium:dicarboxylate symporter family LWM38_03385 PF00012 Hsp70 protein LWM38_03390 PF00226 DnaJ domain LWM38_03390 PF01556 DnaJ C terminal domain LWM38_03390 PF00684 DnaJ central domain LWM38_03395 PF07963 Prokaryotic N-terminal methylation motif LWM38_03395 PF00114 Pilin (bacterial filament) LWM38_03420 PF03806 AbgT putative transporter family LWM38_03425 PF14437 MafB19-like deaminase LWM38_03430 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_03430 PF01464 Transglycosylase SLT domain LWM38_03435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LWM38_03435 PF02769 AIR synthase related protein, C-terminal domain LWM38_03435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LWM38_03440 PF14602 Hexapeptide repeat of succinyl-transferase LWM38_03440 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LWM38_03445 PF01914 MarC family integral membrane protein LWM38_03450 PF07130 YebG protein LWM38_03455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_03455 PF03466 LysR substrate binding domain LWM38_03465 PF17946 RecC C-terminal domain LWM38_03470 PF13361 UvrD-like helicase C-terminal domain LWM38_03470 PF12705 PD-(D/E)XK nuclease superfamily LWM38_03470 PF00580 UvrD/REP helicase N-terminal domain LWM38_03475 PF13538 UvrD-like helicase C-terminal domain LWM38_03485 PF00583 Acetyltransferase (GNAT) family LWM38_03485 PF00696 Amino acid kinase family LWM38_03495 PF06725 3D domain LWM38_03495 PF03562 MltA specific insert domain LWM38_03500 PF00899 ThiF family LWM38_03505 PF02657 Fe-S metabolism associated domain LWM38_03510 PF00266 Aminotransferase class-V LWM38_03515 PF08546 Ketopantoate reductase PanE/ApbA C terminal LWM38_03515 PF02558 Ketopantoate reductase PanE/ApbA LWM38_03520 PF03502 Nucleoside-specific channel-forming protein, Tsx LWM38_03530 PF07690 Major Facilitator Superfamily LWM38_03535 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LWM38_03545 PF05175 Methyltransferase small domain LWM38_03550 PF01722 BolA-like protein LWM38_03555 PF11973 NQRA C-terminal domain LWM38_03555 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LWM38_03560 PF03116 NQR2, RnfD, RnfE family LWM38_03565 PF04205 FMN-binding domain LWM38_03570 PF02508 Rnf-Nqr subunit, membrane protein LWM38_03575 PF02508 Rnf-Nqr subunit, membrane protein LWM38_03580 PF00970 Oxidoreductase FAD-binding domain LWM38_03580 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_03580 PF00175 Oxidoreductase NAD-binding domain LWM38_03585 PF02424 ApbE family LWM38_03590 PF04400 (Na+)-NQR maturation NqrM LWM38_03620 PF13538 UvrD-like helicase C-terminal domain LWM38_03620 PF14490 Helix-hairpin-helix containing domain LWM38_03620 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LWM38_03640 PF11867 Domain of unknown function (DUF3387) LWM38_03640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LWM38_03640 PF18766 SWI2/SNF2 ATPase LWM38_03645 PF01966 HD domain LWM38_03645 PF13286 Phosphohydrolase-associated domain LWM38_03655 PF12161 HsdM N-terminal domain LWM38_03655 PF02384 N-6 DNA Methylase LWM38_03670 PF11798 IMS family HHH motif LWM38_03670 PF11799 impB/mucB/samB family C-terminal domain LWM38_03670 PF00817 impB/mucB/samB family LWM38_03675 PF00817 impB/mucB/samB family LWM38_03675 PF11799 impB/mucB/samB family C-terminal domain LWM38_03675 PF11798 IMS family HHH motif LWM38_03680 PF00270 DEAD/DEAH box helicase LWM38_03680 PF00271 Helicase conserved C-terminal domain LWM38_03680 PF00570 HRDC domain LWM38_03680 PF16124 RecQ zinc-binding LWM38_03680 PF09382 RQC domain LWM38_03685 PF03449 Transcription elongation factor, N-terminal LWM38_03685 PF01272 Transcription elongation factor, GreA/GreB, C-term LWM38_03695 PF00209 Sodium:neurotransmitter symporter family LWM38_03700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LWM38_03700 PF04055 Radical SAM superfamily LWM38_03705 PF03099 Biotin/lipoate A/B protein ligase family LWM38_03710 PF04359 Protein of unknown function (DUF493) LWM38_03715 PF07943 Penicillin-binding protein 5, C-terminal domain LWM38_03715 PF00768 D-alanyl-D-alanine carboxypeptidase LWM38_03720 PF03330 Lytic transglycolase LWM38_03720 PF05036 Sporulation related domain LWM38_03725 PF01098 Cell cycle protein LWM38_03730 PF03717 Penicillin-binding Protein dimerisation domain LWM38_03730 PF00905 Penicillin binding protein transpeptidase domain LWM38_03735 PF02590 Predicted SPOUT methyltransferase LWM38_03745 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LWM38_03745 PF06144 DNA polymerase III, delta subunit LWM38_03750 PF04390 Lipopolysaccharide-assembly LWM38_03755 PF13603 Leucyl-tRNA synthetase, Domain 2 LWM38_03755 PF00133 tRNA synthetases class I (I, L, M and V) LWM38_03755 PF08264 Anticodon-binding domain of tRNA LWM38_03760 PF07295 Zinc-ribbon containing domain LWM38_03765 PF00795 Carbon-nitrogen hydrolase LWM38_03770 PF03471 Transporter associated domain LWM38_03770 PF00571 CBS domain LWM38_03775 PF02130 Uncharacterized protein family UPF0054 LWM38_03780 PF02562 PhoH-like protein LWM38_03785 PF00919 Uncharacterized protein family UPF0004 LWM38_03785 PF01938 TRAM domain LWM38_03785 PF04055 Radical SAM superfamily LWM38_03790 PF01494 FAD binding domain LWM38_03795 PF10282 Lactonase, 7-bladed beta-propeller LWM38_03895 PF01926 50S ribosome-binding GTPase LWM38_03895 PF06071 Protein of unknown function (DUF933) LWM38_03900 PF01195 Peptidyl-tRNA hydrolase LWM38_03905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LWM38_03905 PF14572 Phosphoribosyl synthetase-associated domain LWM38_03910 PF08544 GHMP kinases C terminal LWM38_03910 PF00288 GHMP kinases N terminal domain LWM38_03915 PF03550 Outer membrane lipoprotein LolB LWM38_03920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LWM38_03920 PF01488 Shikimate / quinate 5-dehydrogenase LWM38_03920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LWM38_03925 PF00472 RF-1 domain LWM38_03925 PF03462 PCRF domain LWM38_03930 PF17827 PrmC N-terminal domain LWM38_03930 PF13847 Methyltransferase domain LWM38_03935 PF04247 Invasion gene expression up-regulator, SirB LWM38_03940 PF13369 Transglutaminase-like superfamily LWM38_03945 PF00793 DAHP synthetase I family LWM38_03950 PF00149 Calcineurin-like phosphoesterase LWM38_03950 PF02872 5'-nucleotidase, C-terminal domain LWM38_03955 PF04073 Aminoacyl-tRNA editing domain LWM38_03960 PF00849 RNA pseudouridylate synthase LWM38_03960 PF01479 S4 domain LWM38_03965 PF01713 Smr domain LWM38_03985 PF03173 Putative carbohydrate binding domain LWM38_03985 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LWM38_03985 PF00728 Glycosyl hydrolase family 20, catalytic domain LWM38_03985 PF02838 Glycosyl hydrolase family 20, domain 2 LWM38_03995 PF01032 FecCD transport family LWM38_04000 PF00005 ABC transporter LWM38_04010 PF00403 Heavy-metal-associated domain LWM38_04015 PF00749 tRNA synthetases class I (E and Q), catalytic domain LWM38_04020 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_04020 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_04035 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_04035 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_04060 PF00221 Aromatic amino acid lyase LWM38_04065 PF00535 Glycosyl transferase family 2 LWM38_04075 PF13193 AMP-binding enzyme C-terminal domain LWM38_04075 PF00501 AMP-binding enzyme LWM38_04085 PF00550 Phosphopantetheine attachment site LWM38_04090 PF00550 Phosphopantetheine attachment site LWM38_04115 PF04820 Tryptophan halogenase LWM38_04155 PF01584 CheW-like domain LWM38_04155 PF00072 Response regulator receiver domain LWM38_04160 PF03705 CheR methyltransferase, all-alpha domain LWM38_04160 PF01739 CheR methyltransferase, SAM binding domain LWM38_04165 PF00460 Flagella basal body rod protein LWM38_04170 PF00460 Flagella basal body rod protein LWM38_04170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LWM38_04175 PF03963 Flagellar hook capping protein - N-terminal region LWM38_04175 PF13860 FlgD Ig-like domain LWM38_04175 PF13861 FlgD Tudor-like domain LWM38_04180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LWM38_04180 PF07559 Flagellar basal body protein FlaE LWM38_04180 PF00460 Flagella basal body rod protein LWM38_04185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LWM38_04185 PF00460 Flagella basal body rod protein LWM38_04190 PF00460 Flagella basal body rod protein LWM38_04190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LWM38_04195 PF02107 Flagellar L-ring protein LWM38_04200 PF02119 Flagellar P-ring protein LWM38_04205 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LWM38_04205 PF10135 Rod binding protein LWM38_04210 PF07196 Flagellin hook IN motif LWM38_04210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LWM38_04220 PF00700 Bacterial flagellin C-terminal helical region LWM38_04220 PF07196 Flagellin hook IN motif LWM38_04220 PF00669 Bacterial flagellin N-terminal helical region LWM38_04225 PF00700 Bacterial flagellin C-terminal helical region LWM38_04225 PF07196 Flagellin hook IN motif LWM38_04225 PF00669 Bacterial flagellin N-terminal helical region LWM38_04230 PF00700 Bacterial flagellin C-terminal helical region LWM38_04230 PF07196 Flagellin hook IN motif LWM38_04230 PF00669 Bacterial flagellin N-terminal helical region LWM38_04235 PF03646 FlaG protein LWM38_04240 PF07195 Flagellar hook-associated protein 2 C-terminus LWM38_04240 PF07196 Flagellin hook IN motif LWM38_04240 PF02465 Flagellar hook-associated protein 2 N-terminus LWM38_04250 PF02561 Flagellar protein FliS LWM38_04255 PF00158 Sigma-54 interaction domain LWM38_04255 PF06490 Flagellar regulatory protein FleQ LWM38_04255 PF02954 Bacterial regulatory protein, Fis family LWM38_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_04260 PF00512 His Kinase A (phospho-acceptor) domain LWM38_04260 PF13188 PAS domain LWM38_04265 PF00072 Response regulator receiver domain LWM38_04265 PF00158 Sigma-54 interaction domain LWM38_04265 PF02954 Bacterial regulatory protein, Fis family LWM38_04270 PF02049 Flagellar hook-basal body complex protein FliE LWM38_04275 PF08345 Flagellar M-ring protein C-terminal LWM38_04275 PF01514 Secretory protein of YscJ/FliF family LWM38_04280 PF01706 FliG C-terminal domain LWM38_04280 PF14841 FliG middle domain LWM38_04280 PF14842 FliG N-terminal domain LWM38_04290 PF18269 T3SS EscN ATPase C-terminal domain LWM38_04290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LWM38_04310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LWM38_04310 PF02154 Flagellar motor switch protein FliM LWM38_04315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LWM38_04320 PF04347 Flagellar biosynthesis protein, FliO LWM38_04325 PF00813 FliP family LWM38_04330 PF01313 Bacterial export proteins, family 3 LWM38_04335 PF01311 Bacterial export proteins, family 1 LWM38_04340 PF01312 FlhB HrpN YscU SpaS Family LWM38_04345 PF00771 FHIPEP family LWM38_04350 PF00448 SRP54-type protein, GTPase domain LWM38_04355 PF10609 NUBPL iron-transfer P-loop NTPase LWM38_04360 PF04542 Sigma-70 region 2 LWM38_04360 PF04539 Sigma-70 region 3 LWM38_04360 PF04545 Sigma-70, region 4 LWM38_04365 PF00072 Response regulator receiver domain LWM38_04370 PF04344 Chemotaxis phosphatase, CheZ LWM38_04375 PF02895 Signal transducing histidine kinase, homodimeric domain LWM38_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_04375 PF01627 Hpt domain LWM38_04375 PF00072 Response regulator receiver domain LWM38_04375 PF01584 CheW-like domain LWM38_04380 PF01339 CheB methylesterase LWM38_04380 PF00072 Response regulator receiver domain LWM38_04385 PF13614 AAA domain LWM38_04395 PF01584 CheW-like domain LWM38_04405 PF00005 ABC transporter LWM38_04410 PF03379 CcmB protein LWM38_04415 PF01578 Cytochrome C assembly protein LWM38_04425 PF03100 CcmE LWM38_04430 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LWM38_04430 PF01578 Cytochrome C assembly protein LWM38_04435 PF08534 Redoxin LWM38_04440 PF03918 Cytochrome C biogenesis protein LWM38_04445 PF03918 Cytochrome C biogenesis protein LWM38_04450 PF04333 MlaA lipoprotein LWM38_04455 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LWM38_04460 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LWM38_04470 PF04542 Sigma-70 region 2 LWM38_04470 PF08281 Sigma-70, region 4 LWM38_04475 PF02803 Thiolase, C-terminal domain LWM38_04475 PF00108 Thiolase, N-terminal domain LWM38_04480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LWM38_04480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LWM38_04480 PF00378 Enoyl-CoA hydratase/isomerase LWM38_04485 PF16187 Middle or third domain of peptidase_M16 LWM38_04485 PF00675 Insulinase (Peptidase family M16) LWM38_04485 PF05193 Peptidase M16 inactive domain LWM38_04490 PF00300 Histidine phosphatase superfamily (branch 1) LWM38_04495 PF01713 Smr domain LWM38_04500 PF05175 Methyltransferase small domain LWM38_04505 PF01810 LysE type translocator LWM38_04510 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LWM38_04515 PF00486 Transcriptional regulatory protein, C terminal LWM38_04515 PF00072 Response regulator receiver domain LWM38_04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_04520 PF00512 His Kinase A (phospho-acceptor) domain LWM38_04520 PF00672 HAMP domain LWM38_04525 PF01547 Bacterial extracellular solute-binding protein LWM38_04530 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_04535 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_04540 PF00005 ABC transporter LWM38_04540 PF17912 MalK OB fold domain LWM38_04540 PF03459 TOBE domain LWM38_04545 PF01926 50S ribosome-binding GTPase LWM38_04545 PF13167 GTP-binding GTPase N-terminal LWM38_04545 PF16360 GTP-binding GTPase Middle Region LWM38_04550 PF03060 Nitronate monooxygenase LWM38_04550 PF00698 Acyl transferase domain LWM38_04555 PF16197 Ketoacyl-synthetase C-terminal extension LWM38_04555 PF00698 Acyl transferase domain LWM38_04555 PF00550 Phosphopantetheine attachment site LWM38_04555 PF08659 KR domain LWM38_04555 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_04555 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_04555 PF14765 Polyketide synthase dehydratase LWM38_04565 PF00698 Acyl transferase domain LWM38_04565 PF16197 Ketoacyl-synthetase C-terminal extension LWM38_04565 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_04565 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_04565 PF00550 Phosphopantetheine attachment site LWM38_04565 PF14765 Polyketide synthase dehydratase LWM38_04565 PF08659 KR domain LWM38_04570 PF01648 4'-phosphopantetheinyl transferase superfamily LWM38_04580 PF03480 Bacterial extracellular solute-binding protein, family 7 LWM38_04585 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LWM38_04590 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LWM38_04600 PF02954 Bacterial regulatory protein, Fis family LWM38_04600 PF00072 Response regulator receiver domain LWM38_04600 PF00158 Sigma-54 interaction domain LWM38_04605 PF00512 His Kinase A (phospho-acceptor) domain LWM38_04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_04605 PF02743 Cache domain LWM38_04610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_04610 PF05698 Bacterial trigger factor protein (TF) C-terminus LWM38_04610 PF05697 Bacterial trigger factor protein (TF) LWM38_04615 PF00574 Clp protease LWM38_04620 PF06689 ClpX C4-type zinc finger LWM38_04620 PF10431 C-terminal, D2-small domain, of ClpB protein LWM38_04620 PF07724 AAA domain (Cdc48 subfamily) LWM38_04625 PF05362 Lon protease (S16) C-terminal proteolytic domain LWM38_04625 PF02190 ATP-dependent protease La (LON) substrate-binding domain LWM38_04625 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_04630 PF00216 Bacterial DNA-binding protein LWM38_04635 PF13145 PPIC-type PPIASE domain LWM38_04655 PF01966 HD domain LWM38_04655 PF13286 Phosphohydrolase-associated domain LWM38_04665 PF00155 Aminotransferase class I and II LWM38_04670 PF00425 chorismate binding enzyme LWM38_04675 PF16582 Middle domain of thiamine pyrophosphate LWM38_04675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LWM38_04675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LWM38_04680 PF00561 alpha/beta hydrolase fold LWM38_04685 PF00378 Enoyl-CoA hydratase/isomerase LWM38_04690 PF13378 Enolase C-terminal domain-like LWM38_04695 PF00501 AMP-binding enzyme LWM38_04695 PF13193 AMP-binding enzyme C-terminal domain LWM38_04705 PF03601 Conserved hypothetical protein 698 LWM38_04710 PF07690 Major Facilitator Superfamily LWM38_04750 PF13533 Biotin-lipoyl like LWM38_04755 PF00873 AcrB/AcrD/AcrF family LWM38_04765 PF00155 Aminotransferase class I and II LWM38_04765 PF00392 Bacterial regulatory proteins, gntR family LWM38_04770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LWM38_04770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_04775 PF01925 Sulfite exporter TauE/SafE LWM38_04780 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_04785 PF01037 Lrp/AsnC ligand binding domain LWM38_04785 PF13404 AsnC-type helix-turn-helix domain LWM38_04800 PF09619 Type III secretion system lipoprotein chaperone (YscW) LWM38_04805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LWM38_04825 PF00923 Transaldolase/Fructose-6-phosphate aldolase LWM38_04830 PF00571 CBS domain LWM38_04830 PF01380 SIS domain LWM38_04835 PF03608 PTS system enzyme II sorbitol-specific factor LWM38_04840 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LWM38_04840 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LWM38_04845 PF03829 PTS system glucitol/sorbitol-specific IIA component LWM38_04850 PF00106 short chain dehydrogenase LWM38_04860 PF00455 DeoR C terminal sensor domain LWM38_04860 PF08220 DeoR-like helix-turn-helix domain LWM38_04865 PF03608 PTS system enzyme II sorbitol-specific factor LWM38_04870 PF07663 Sorbitol phosphotransferase enzyme II C-terminus LWM38_04870 PF03612 Sorbitol phosphotransferase enzyme II N-terminus LWM38_04875 PF03829 PTS system glucitol/sorbitol-specific IIA component LWM38_04880 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_04900 PF01693 Caulimovirus viroplasmin LWM38_04905 PF00535 Glycosyl transferase family 2 LWM38_04915 PF00583 Acetyltransferase (GNAT) family LWM38_04915 PF00814 Glycoprotease family LWM38_04925 PF00255 Glutathione peroxidase LWM38_04930 PF03109 ABC1 family LWM38_04945 PF00072 Response regulator receiver domain LWM38_04945 PF00158 Sigma-54 interaction domain LWM38_04945 PF02954 Bacterial regulatory protein, Fis family LWM38_04955 PF01645 Conserved region in glutamate synthase LWM38_04965 PF00376 MerR family regulatory protein LWM38_04965 PF09278 MerR, DNA binding LWM38_04985 PF01037 Lrp/AsnC ligand binding domain LWM38_04990 PF01810 LysE type translocator LWM38_04995 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_04995 PF13192 Thioredoxin domain LWM38_05000 PF10417 C-terminal domain of 1-Cys peroxiredoxin LWM38_05000 PF00578 AhpC/TSA family LWM38_05010 PF05036 Sporulation related domain LWM38_05010 PF03330 Lytic transglycolase LWM38_05015 PF01979 Amidohydrolase family LWM38_05025 PF12833 Helix-turn-helix domain LWM38_05025 PF02311 AraC-like ligand binding domain LWM38_05030 PF08212 Lipocalin-like domain LWM38_05035 PF06481 COX Aromatic Rich Motif LWM38_05035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LWM38_05040 PF00115 Cytochrome C and Quinol oxidase polypeptide I LWM38_05045 PF00510 Cytochrome c oxidase subunit III LWM38_05050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LWM38_05055 PF01040 UbiA prenyltransferase family LWM38_05065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LWM38_05070 PF00591 Glycosyl transferase family, a/b domain LWM38_05070 PF02885 Glycosyl transferase family, helical bundle domain LWM38_05080 PF00571 CBS domain LWM38_05080 PF01743 Poly A polymerase head domain LWM38_05085 PF01554 MatE LWM38_05090 PF00403 Heavy-metal-associated domain LWM38_05095 PF01048 Phosphorylase superfamily LWM38_05105 PF00672 HAMP domain LWM38_05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_05110 PF01230 HIT domain LWM38_05125 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LWM38_05125 PF13036 Peptidoglycan-synthase activator LpoB LWM38_05135 PF05728 Uncharacterised protein family (UPF0227) LWM38_05140 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_05155 PF02559 CarD-like/TRCF domain LWM38_05155 PF00270 DEAD/DEAH box helicase LWM38_05155 PF00271 Helicase conserved C-terminal domain LWM38_05155 PF03461 TRCF domain LWM38_05155 PF17757 UvrB interaction domain LWM38_05165 PF02687 FtsX-like permease family LWM38_05165 PF12704 MacB-like periplasmic core domain LWM38_05170 PF00005 ABC transporter LWM38_05175 PF02687 FtsX-like permease family LWM38_05175 PF12704 MacB-like periplasmic core domain LWM38_05185 PF03772 Competence protein LWM38_05185 PF00753 Metallo-beta-lactamase superfamily LWM38_05190 PF00664 ABC transporter transmembrane region LWM38_05190 PF00005 ABC transporter LWM38_05195 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LWM38_05200 PF03966 Trm112p-like protein LWM38_05205 PF02348 Cytidylyltransferase LWM38_05210 PF02224 Cytidylate kinase LWM38_05215 PF00575 S1 RNA binding domain LWM38_05220 PF00216 Bacterial DNA-binding protein LWM38_05225 PF06305 Lipopolysaccharide assembly protein A domain LWM38_05230 PF18073 Rubredoxin metal binding domain LWM38_05235 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LWM38_05240 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LWM38_05250 PF03466 LysR substrate binding domain LWM38_05250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_05260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LWM38_05260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LWM38_05265 PF01037 Lrp/AsnC ligand binding domain LWM38_05270 PF01580 FtsK/SpoIIIE family LWM38_05270 PF17854 FtsK alpha domain LWM38_05270 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LWM38_05270 PF09397 Ftsk gamma domain LWM38_05275 PF03548 Outer membrane lipoprotein carrier protein LolA LWM38_05280 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_05280 PF16193 AAA C-terminal domain LWM38_05280 PF12002 MgsA AAA+ ATPase C terminal LWM38_05285 PF02403 Seryl-tRNA synthetase N-terminal domain LWM38_05285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LWM38_05290 PF00202 Aminotransferase class-III LWM38_05295 PF04055 Radical SAM superfamily LWM38_05295 PF06968 Biotin and Thiamin Synthesis associated domain LWM38_05300 PF00155 Aminotransferase class I and II LWM38_05305 PF08241 Methyltransferase domain LWM38_05320 PF01435 Peptidase family M48 LWM38_05325 PF08328 Adenylosuccinate lyase C-terminal LWM38_05325 PF00206 Lyase LWM38_05330 PF04356 Protein of unknown function (DUF489) LWM38_05345 PF00294 pfkB family carbohydrate kinase LWM38_05350 PF00816 H-NS histone family LWM38_05355 PF03553 Na+/H+ antiporter family LWM38_05360 PF01634 ATP phosphoribosyltransferase LWM38_05360 PF08029 HisG, C-terminal domain LWM38_05365 PF00815 Histidinol dehydrogenase LWM38_05370 PF00155 Aminotransferase class I and II LWM38_05375 PF08645 Polynucleotide kinase 3 phosphatase LWM38_05375 PF00475 Imidazoleglycerol-phosphate dehydratase LWM38_05380 PF00117 Glutamine amidotransferase class-I LWM38_05385 PF00977 Histidine biosynthesis protein LWM38_05390 PF00977 Histidine biosynthesis protein LWM38_05395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LWM38_05395 PF01502 Phosphoribosyl-AMP cyclohydrolase LWM38_05400 PF02810 SEC-C motif LWM38_05405 PF08668 HDOD domain LWM38_05405 PF00563 EAL domain LWM38_05410 PF00149 Calcineurin-like phosphoesterase LWM38_05415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LWM38_05420 PF09190 DALR domain LWM38_05420 PF01406 tRNA synthetases class I (C) catalytic domain LWM38_05425 PF00265 Thymidine kinase LWM38_05430 PF02698 DUF218 domain LWM38_05450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_05455 PF03649 Uncharacterised protein family (UPF0014) LWM38_05460 PF06796 Periplasmic nitrate reductase protein NapE LWM38_05465 PF03264 NapC/NirT cytochrome c family, N-terminal region LWM38_05470 PF00384 Molybdopterin oxidoreductase LWM38_05470 PF18364 Molybdopterin oxidoreductase N-terminal domain LWM38_05470 PF01568 Molydopterin dinucleotide binding domain LWM38_05480 PF02833 DHHA2 domain LWM38_05480 PF01368 DHH family LWM38_05495 PF00005 ABC transporter LWM38_05500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_05500 PF00005 ABC transporter LWM38_05505 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_05505 PF12911 N-terminal TM domain of oligopeptide transport permease C LWM38_05510 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_05515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_05520 PF02954 Bacterial regulatory protein, Fis family LWM38_05520 PF00158 Sigma-54 interaction domain LWM38_05525 PF04012 PspA/IM30 family LWM38_05530 PF06667 Phage shock protein B LWM38_05535 PF04024 PspC domain LWM38_05540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_05540 PF00529 HlyD membrane-fusion protein of T1SS LWM38_05545 PF13533 Biotin-lipoyl like LWM38_05550 PF00873 AcrB/AcrD/AcrF family LWM38_05555 PF03352 Methyladenine glycosylase LWM38_05560 PF01053 Cys/Met metabolism PLP-dependent enzyme LWM38_05565 PF13091 PLD-like domain LWM38_05565 PF13396 Phospholipase_D-nuclease N-terminal LWM38_05570 PF00209 Sodium:neurotransmitter symporter family LWM38_05575 PF00849 RNA pseudouridylate synthase LWM38_05580 PF01170 Putative RNA methylase family UPF0020 LWM38_05580 PF02926 THUMP domain LWM38_05580 PF10672 S-adenosylmethionine-dependent methyltransferase LWM38_05585 PF01066 CDP-alcohol phosphatidyltransferase LWM38_05590 PF00005 ABC transporter LWM38_05595 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_05600 PF13416 Bacterial extracellular solute-binding protein LWM38_05610 PF06945 Protein of unknown function (DUF1289) LWM38_05620 PF01910 Thiamine-binding protein LWM38_05630 PF00270 DEAD/DEAH box helicase LWM38_05630 PF00271 Helicase conserved C-terminal domain LWM38_05640 PF18027 Cytosolic carboxypeptidase N-terminal domain LWM38_05640 PF00246 Zinc carboxypeptidase LWM38_05655 PF00005 ABC transporter LWM38_05655 PF00571 CBS domain LWM38_05660 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_05665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LWM38_05675 PF00072 Response regulator receiver domain LWM38_05710 PF00691 OmpA family LWM38_05710 PF01389 OmpA-like transmembrane domain LWM38_05755 PF00486 Transcriptional regulatory protein, C terminal LWM38_05755 PF00072 Response regulator receiver domain LWM38_05780 PF00589 Phage integrase family LWM38_05780 PF13495 Phage integrase, N-terminal SAM-like domain LWM38_05830 PF01596 O-methyltransferase LWM38_05845 PF02371 Transposase IS116/IS110/IS902 family LWM38_05845 PF01548 Transposase LWM38_05860 PF04266 ASCH domain LWM38_05870 PF01386 Ribosomal L25p family LWM38_05875 PF00512 His Kinase A (phospho-acceptor) domain LWM38_05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_05875 PF00672 HAMP domain LWM38_05880 PF00486 Transcriptional regulatory protein, C terminal LWM38_05880 PF00072 Response regulator receiver domain LWM38_05890 PF00271 Helicase conserved C-terminal domain LWM38_05890 PF04851 Type III restriction enzyme, res subunit LWM38_05895 PF01479 S4 domain LWM38_05895 PF00849 RNA pseudouridylate synthase LWM38_05900 PF07690 Major Facilitator Superfamily LWM38_05910 PF11066 Protein of unknown function (DUF2867) LWM38_05910 PF13460 NAD(P)H-binding LWM38_05915 PF01554 MatE LWM38_05920 PF00005 ABC transporter LWM38_05935 PF06965 Na+/H+ antiporter 1 LWM38_05940 PF00691 OmpA family LWM38_05940 PF05736 OprF membrane domain LWM38_05955 PF16295 Tetracyclin repressor-like, C-terminal domain LWM38_05955 PF00440 Bacterial regulatory proteins, tetR family LWM38_05960 PF09317 Domain of unknown function (DUF1974) LWM38_05960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LWM38_05960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LWM38_05960 PF02770 Acyl-CoA dehydrogenase, middle domain LWM38_05965 PF12241 Trans-2-enoyl-CoA reductase catalytic region LWM38_05965 PF07055 Enoyl reductase FAD binding domain LWM38_05965 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LWM38_05970 PF06826 Predicted Permease Membrane Region LWM38_05970 PF02080 TrkA-C domain LWM38_05975 PF00462 Glutaredoxin LWM38_05980 PF01380 SIS domain LWM38_05980 PF01418 Helix-turn-helix domain, rpiR family LWM38_05985 PF00282 Pyridoxal-dependent decarboxylase conserved domain LWM38_05995 PF03956 Lysine exporter LysO LWM38_06005 PF04994 TfoX C-terminal domain LWM38_06005 PF04993 TfoX N-terminal domain LWM38_06020 PF00512 His Kinase A (phospho-acceptor) domain LWM38_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_06030 PF00266 Aminotransferase class-V LWM38_06050 PF00155 Aminotransferase class I and II LWM38_06055 PF00672 HAMP domain LWM38_06055 PF01966 HD domain LWM38_06065 PF00155 Aminotransferase class I and II LWM38_06065 PF00392 Bacterial regulatory proteins, gntR family LWM38_06075 PF00152 tRNA synthetases class II (D, K and N) LWM38_06075 PF01336 OB-fold nucleic acid binding domain LWM38_06080 PF12729 Four helix bundle sensory module for signal transduction LWM38_06080 PF00672 HAMP domain LWM38_06080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_06085 PF01242 6-pyruvoyl tetrahydropterin synthase LWM38_06090 PF00384 Molybdopterin oxidoreductase LWM38_06090 PF01568 Molydopterin dinucleotide binding domain LWM38_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06095 PF03466 LysR substrate binding domain LWM38_06100 PF02634 FdhD/NarQ family LWM38_06105 PF03222 Tryptophan/tyrosine permease family LWM38_06110 PF03313 Serine dehydratase alpha chain LWM38_06110 PF03315 Serine dehydratase beta chain LWM38_06115 PF03222 Tryptophan/tyrosine permease family LWM38_06120 PF00293 NUDIX domain LWM38_06130 PF00072 Response regulator receiver domain LWM38_06130 PF09308 LuxQ, periplasmic LWM38_06130 PF00512 His Kinase A (phospho-acceptor) domain LWM38_06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_06135 PF04715 Anthranilate synthase component I, N terminal region LWM38_06135 PF00425 chorismate binding enzyme LWM38_06150 PF04317 YcjX-like family, DUF463 LWM38_06155 PF05128 Domain of unknown function (DUF697) LWM38_06160 PF18024 Helix-turn-helix domain LWM38_06160 PF00158 Sigma-54 interaction domain LWM38_06165 PF13302 Acetyltransferase (GNAT) domain LWM38_06175 PF13426 PAS domain LWM38_06175 PF00990 Diguanylate cyclase, GGDEF domain LWM38_06175 PF00563 EAL domain LWM38_06185 PF00012 Hsp70 protein LWM38_06190 PF00012 Hsp70 protein LWM38_06230 PF00271 Helicase conserved C-terminal domain LWM38_06230 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LWM38_06230 PF00270 DEAD/DEAH box helicase LWM38_06230 PF11898 Domain of unknown function (DUF3418) LWM38_06230 PF04408 Helicase associated domain (HA2) LWM38_06270 PF00072 Response regulator receiver domain LWM38_06270 PF00990 Diguanylate cyclase, GGDEF domain LWM38_06275 PF01409 tRNA synthetases class II core domain (F) LWM38_06275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LWM38_06280 PF01588 Putative tRNA binding domain LWM38_06280 PF03147 Ferredoxin-fold anticodon binding domain LWM38_06280 PF03484 tRNA synthetase B5 domain LWM38_06280 PF03483 B3/4 domain LWM38_06280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LWM38_06310 PF01810 LysE type translocator LWM38_06315 PF12833 Helix-turn-helix domain LWM38_06320 PF01037 Lrp/AsnC ligand binding domain LWM38_06325 PF01053 Cys/Met metabolism PLP-dependent enzyme LWM38_06335 PF01039 Carboxyl transferase domain LWM38_06335 PF17848 Acetyl-coA carboxylase zinc finger domain LWM38_06340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06340 PF03466 LysR substrate binding domain LWM38_06360 PF02001 Protein of unknown function DUF134 LWM38_06380 PF12729 Four helix bundle sensory module for signal transduction LWM38_06380 PF00672 HAMP domain LWM38_06380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_06385 PF04973 Nicotinamide mononucleotide transporter LWM38_06390 PF01048 Phosphorylase superfamily LWM38_06410 PF00216 Bacterial DNA-binding protein LWM38_06430 PF00117 Glutamine amidotransferase class-I LWM38_06435 PF12852 Cupin LWM38_06435 PF12833 Helix-turn-helix domain LWM38_06455 PF08279 HTH domain LWM38_06455 PF13280 WYL domain LWM38_06465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_06465 PF02743 Cache domain LWM38_06465 PF00672 HAMP domain LWM38_06475 PF03466 LysR substrate binding domain LWM38_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_06485 PF00072 Response regulator receiver domain LWM38_06490 PF00155 Aminotransferase class I and II LWM38_06495 PF00216 Bacterial DNA-binding protein LWM38_06505 PF05724 Thiopurine S-methyltransferase (TPMT) LWM38_06510 PF02222 ATP-grasp domain LWM38_06515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LWM38_06515 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LWM38_06520 PF04172 LrgB-like family LWM38_06525 PF03788 LrgA family LWM38_06530 PF08411 Exonuclease C-terminal LWM38_06530 PF00929 Exonuclease LWM38_06535 PF04116 Fatty acid hydroxylase superfamily LWM38_06545 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LWM38_06545 PF12833 Helix-turn-helix domain LWM38_06555 PF03372 Endonuclease/Exonuclease/phosphatase family LWM38_06560 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LWM38_06565 PF00375 Sodium:dicarboxylate symporter family LWM38_06570 PF13460 NAD(P)H-binding LWM38_06575 PF01613 Flavin reductase like domain LWM38_06580 PF02277 Phosphoribosyltransferase LWM38_06585 PF02654 Cobalamin-5-phosphate synthase LWM38_06590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LWM38_06605 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LWM38_06610 PF01032 FecCD transport family LWM38_06615 PF00005 ABC transporter LWM38_06625 PF16197 Ketoacyl-synthetase C-terminal extension LWM38_06625 PF08659 KR domain LWM38_06625 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_06625 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_06625 PF00550 Phosphopantetheine attachment site LWM38_06625 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_06625 PF00698 Acyl transferase domain LWM38_06625 PF00107 Zinc-binding dehydrogenase LWM38_06625 PF14765 Polyketide synthase dehydratase LWM38_06630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06630 PF03466 LysR substrate binding domain LWM38_06645 PF00392 Bacterial regulatory proteins, gntR family LWM38_06645 PF00155 Aminotransferase class I and II LWM38_06650 PF01654 Cytochrome bd terminal oxidase subunit I LWM38_06655 PF02322 Cytochrome bd terminal oxidase subunit II LWM38_06660 PF08173 Membrane bound YbgT-like protein LWM38_06665 PF00583 Acetyltransferase (GNAT) family LWM38_06675 PF00990 Diguanylate cyclase, GGDEF domain LWM38_06685 PF07690 Major Facilitator Superfamily LWM38_06690 PF03466 LysR substrate binding domain LWM38_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06700 PF01863 Protein of unknown function DUF45 LWM38_06705 PF05971 RNA methyltransferase LWM38_06715 PF04204 Homoserine O-succinyltransferase LWM38_06730 PF01546 Peptidase family M20/M25/M40 LWM38_06730 PF07687 Peptidase dimerisation domain LWM38_06735 PF00990 Diguanylate cyclase, GGDEF domain LWM38_06735 PF00072 Response regulator receiver domain LWM38_06760 PF00709 Adenylosuccinate synthetase LWM38_06765 PF03466 LysR substrate binding domain LWM38_06765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_06770 PF00672 HAMP domain LWM38_06770 PF12729 Four helix bundle sensory module for signal transduction LWM38_06770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_06785 PF00583 Acetyltransferase (GNAT) family LWM38_06790 PF00082 Subtilase family LWM38_06795 PF00149 Calcineurin-like phosphoesterase LWM38_06795 PF12320 Type 5 capsule protein repressor C-terminal domain LWM38_06800 PF13476 AAA domain LWM38_06815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LWM38_06820 PF00582 Universal stress protein family LWM38_06850 PF00293 NUDIX domain LWM38_06865 PF00849 RNA pseudouridylate synthase LWM38_06865 PF01479 S4 domain LWM38_06890 PF00293 NUDIX domain LWM38_06915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LWM38_06935 PF00583 Acetyltransferase (GNAT) family LWM38_06955 PF02810 SEC-C motif LWM38_06955 PF07517 SecA DEAD-like domain LWM38_06955 PF01043 SecA preprotein cross-linking domain LWM38_06955 PF07516 SecA Wing and Scaffold domain LWM38_06985 PF12392 Collagenase LWM38_06985 PF01136 Peptidase family U32 LWM38_06995 PF00005 ABC transporter LWM38_06995 PF00664 ABC transporter transmembrane region LWM38_07000 PF00005 ABC transporter LWM38_07005 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_07010 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07015 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_07050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_07085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_07085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_07105 PF00589 Phage integrase family LWM38_07125 PF16123 Hydroxyacylglutathione hydrolase C-terminus LWM38_07125 PF00753 Metallo-beta-lactamase superfamily LWM38_07130 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_07130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LWM38_07135 PF03466 LysR substrate binding domain LWM38_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_07140 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_07145 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_07150 PF02463 RecF/RecN/SMC N terminal domain LWM38_07165 PF01327 Polypeptide deformylase LWM38_07180 PF02397 Bacterial sugar transferase LWM38_07190 PF00534 Glycosyl transferases group 1 LWM38_07190 PF13579 Glycosyl transferase 4-like domain LWM38_07220 PF02954 Bacterial regulatory protein, Fis family LWM38_07220 PF00072 Response regulator receiver domain LWM38_07220 PF00158 Sigma-54 interaction domain LWM38_07240 PF00691 OmpA family LWM38_07250 PF01068 ATP dependent DNA ligase domain LWM38_07250 PF14743 DNA ligase OB-like domain LWM38_07255 PF01554 MatE LWM38_07260 PF00677 Lumazine binding domain LWM38_07270 PF03881 Fructosamine kinase LWM38_07280 PF00877 NlpC/P60 family LWM38_07285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_07285 PF12729 Four helix bundle sensory module for signal transduction LWM38_07285 PF00672 HAMP domain LWM38_07295 PF03942 DTW domain LWM38_07300 PF00480 ROK family LWM38_07310 PF00994 Probable molybdopterin binding domain LWM38_07310 PF03454 MoeA C-terminal region (domain IV) LWM38_07310 PF03453 MoeA N-terminal region (domain I and II) LWM38_07315 PF12804 MobA-like NTP transferase domain LWM38_07320 PF00005 ABC transporter LWM38_07320 PF08402 TOBE domain LWM38_07325 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07330 PF12849 PBP superfamily domain LWM38_07335 PF02954 Bacterial regulatory protein, Fis family LWM38_07335 PF00072 Response regulator receiver domain LWM38_07335 PF00158 Sigma-54 interaction domain LWM38_07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_07340 PF00512 His Kinase A (phospho-acceptor) domain LWM38_07345 PF17200 Single Cache domain 2 LWM38_07345 PF00672 HAMP domain LWM38_07345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_07360 PF00005 ABC transporter LWM38_07360 PF12848 ABC transporter LWM38_07365 PF02634 FdhD/NarQ family LWM38_07385 PF02613 Nitrate reductase delta subunit LWM38_07395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_07395 PF01568 Molydopterin dinucleotide binding domain LWM38_07395 PF00384 Molybdopterin oxidoreductase LWM38_07400 PF13247 4Fe-4S dicluster domain LWM38_07415 PF00909 Ammonium Transporter Family LWM38_07420 PF02146 Sir2 family LWM38_07425 PF00990 Diguanylate cyclase, GGDEF domain LWM38_07430 PF13416 Bacterial extracellular solute-binding protein LWM38_07435 PF13416 Bacterial extracellular solute-binding protein LWM38_07440 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07445 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07450 PF08402 TOBE domain LWM38_07450 PF00005 ABC transporter LWM38_07470 PF01171 PP-loop family LWM38_07475 PF00582 Universal stress protein family LWM38_07480 PF13545 Crp-like helix-turn-helix domain LWM38_07480 PF00027 Cyclic nucleotide-binding domain LWM38_07495 PF00403 Heavy-metal-associated domain LWM38_07505 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LWM38_07505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LWM38_07520 PF00115 Cytochrome C and Quinol oxidase polypeptide I LWM38_07565 PF17414 MatP C-terminal ribbon-helix-helix domain LWM38_07565 PF06303 MatP N-terminal domain LWM38_07570 PF05362 Lon protease (S16) C-terminal proteolytic domain LWM38_07570 PF13654 AAA domain LWM38_07575 PF07977 FabA-like domain LWM38_07580 PF04957 Ribosome modulation factor LWM38_07590 PF00005 ABC transporter LWM38_07590 PF16326 ABC transporter C-terminal domain LWM38_07590 PF12848 ABC transporter LWM38_07600 PF10672 S-adenosylmethionine-dependent methyltransferase LWM38_07600 PF02926 THUMP domain LWM38_07600 PF01170 Putative RNA methylase family UPF0020 LWM38_07605 PF07126 Cell-division protein ZapC LWM38_07610 PF01180 Dihydroorotate dehydrogenase LWM38_07615 PF05088 Bacterial NAD-glutamate dehydrogenase LWM38_07625 PF01433 Peptidase family M1 domain LWM38_07625 PF11940 Domain of unknown function (DUF3458) Ig-like fold LWM38_07625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LWM38_07635 PF03572 Peptidase family S41 LWM38_07635 PF00595 PDZ domain LWM38_07635 PF17804 Tail specific protease N-terminal domain LWM38_07635 PF11818 C-terminal domain of tail specific protease (DUF3340) LWM38_07640 PF17516 ProQ C-terminal domain LWM38_07640 PF04352 ProQ/FINO family LWM38_07645 PF13185 GAF domain LWM38_07650 PF00664 ABC transporter transmembrane region LWM38_07650 PF00005 ABC transporter LWM38_07655 PF04403 Paraquat-inducible protein A LWM38_07660 PF02470 MlaD protein LWM38_07665 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LWM38_07665 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LWM38_07665 PF01189 16S rRNA methyltransferase RsmB/F LWM38_07670 PF13509 S1 domain LWM38_07670 PF17783 CvfB-like winged helix domain LWM38_07685 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LWM38_07685 PF02896 PEP-utilising enzyme, TIM barrel domain LWM38_07685 PF00391 PEP-utilising enzyme, mobile domain LWM38_07690 PF00793 DAHP synthetase I family LWM38_07695 PF04461 Protein of unknown function (DUF520) LWM38_07700 PF10414 Sirohaem synthase dimerisation region LWM38_07700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LWM38_07700 PF14824 Sirohaem biosynthesis protein central LWM38_07705 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_07710 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07715 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_07720 PF00005 ABC transporter LWM38_07725 PF01027 Inhibitor of apoptosis-promoting Bax1 LWM38_07730 PF04358 DsrC like protein LWM38_07735 PF00708 Acylphosphatase LWM38_07740 PF00672 HAMP domain LWM38_07740 PF02743 Cache domain LWM38_07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_07745 PF10672 S-adenosylmethionine-dependent methyltransferase LWM38_07745 PF17785 PUA-like domain LWM38_07760 PF05736 OprF membrane domain LWM38_07760 PF00691 OmpA family LWM38_07770 PF17151 Periplasmic sensor domain LWM38_07770 PF00990 Diguanylate cyclase, GGDEF domain LWM38_07775 PF06508 Queuosine biosynthesis protein QueC LWM38_07780 PF04055 Radical SAM superfamily LWM38_07800 PF16177 Acetyl-coenzyme A synthetase N-terminus LWM38_07800 PF00501 AMP-binding enzyme LWM38_07800 PF13193 AMP-binding enzyme C-terminal domain LWM38_07805 PF04303 PrpF protein LWM38_07810 PF00694 Aconitase C-terminal domain LWM38_07810 PF00330 Aconitase family (aconitate hydratase) LWM38_07815 PF00285 Citrate synthase, C-terminal domain LWM38_07840 PF01970 Tripartite tricarboxylate transporter TctA family LWM38_07855 PF09905 DNA-binding protein VF530 LWM38_07860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_07860 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LWM38_07865 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LWM38_07870 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LWM38_07870 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LWM38_07875 PF12431 Transcriptional regulator LWM38_07875 PF00072 Response regulator receiver domain LWM38_07880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LWM38_07880 PF17203 Single cache domain 3 LWM38_07880 PF00989 PAS fold LWM38_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_07895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_07910 PF01235 Sodium:alanine symporter family LWM38_07925 PF01235 Sodium:alanine symporter family LWM38_07940 PF03440 Aerolysin/Pertussis toxin (APT) domain LWM38_07940 PF01117 Aerolysin toxin LWM38_07945 PF01810 LysE type translocator LWM38_07950 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LWM38_07960 PF08281 Sigma-70, region 4 LWM38_07960 PF04542 Sigma-70 region 2 LWM38_07975 PF01925 Sulfite exporter TauE/SafE LWM38_07985 PF01717 Cobalamin-independent synthase, Catalytic domain LWM38_07985 PF08267 Cobalamin-independent synthase, N-terminal domain LWM38_08020 PF01212 Beta-eliminating lyase LWM38_08035 PF01641 SelR domain LWM38_08035 PF01625 Peptide methionine sulfoxide reductase LWM38_08045 PF00491 Arginase family LWM38_08050 PF17944 Arginine decarboxylase C-terminal helical extension LWM38_08050 PF17810 Arginine decarboxylase helical bundle domain LWM38_08050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LWM38_08055 PF00171 Aldehyde dehydrogenase family LWM38_08060 PF17932 Tetracyclin repressor-like, C-terminal domain LWM38_08060 PF00440 Bacterial regulatory proteins, tetR family LWM38_08065 PF00005 ABC transporter LWM38_08065 PF16326 ABC transporter C-terminal domain LWM38_08065 PF12848 ABC transporter LWM38_08080 PF04266 ASCH domain LWM38_08085 PF00453 Ribosomal protein L20 LWM38_08090 PF01632 Ribosomal protein L35 LWM38_08095 PF00707 Translation initiation factor IF-3, C-terminal domain LWM38_08095 PF05198 Translation initiation factor IF-3, N-terminal domain LWM38_08100 PF03129 Anticodon binding domain LWM38_08100 PF02824 TGS domain LWM38_08100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LWM38_08100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LWM38_08110 PF07070 SpoOM protein LWM38_08115 PF00392 Bacterial regulatory proteins, gntR family LWM38_08115 PF07702 UTRA domain LWM38_08120 PF01979 Amidohydrolase family LWM38_08125 PF00491 Arginase family LWM38_08130 PF01175 Urocanase Rossmann-like domain LWM38_08130 PF17392 Urocanase C-terminal domain LWM38_08130 PF17391 Urocanase N-terminal domain LWM38_08135 PF00221 Aromatic amino acid lyase LWM38_08145 PF04191 Phospholipid methyltransferase LWM38_08150 PF02913 FAD linked oxidases, C-terminal domain LWM38_08150 PF01565 FAD binding domain LWM38_08150 PF13183 4Fe-4S dicluster domain LWM38_08165 PF13488 Glycine zipper LWM38_08165 PF00691 OmpA family LWM38_08190 PF01259 SAICAR synthetase LWM38_08200 PF00270 DEAD/DEAH box helicase LWM38_08200 PF00271 Helicase conserved C-terminal domain LWM38_08200 PF04408 Helicase associated domain (HA2) LWM38_08200 PF08482 ATP-dependent helicase C-terminal LWM38_08205 PF03949 Malic enzyme, NAD binding domain LWM38_08205 PF00390 Malic enzyme, N-terminal domain LWM38_08210 PF02698 DUF218 domain LWM38_08215 PF00939 Sodium:sulfate symporter transmembrane region LWM38_08220 PF00990 Diguanylate cyclase, GGDEF domain LWM38_08220 PF00072 Response regulator receiver domain LWM38_08230 PF00266 Aminotransferase class-V LWM38_08245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_08250 PF00005 ABC transporter LWM38_08250 PF00664 ABC transporter transmembrane region LWM38_08255 PF00005 ABC transporter LWM38_08255 PF00664 ABC transporter transmembrane region LWM38_08260 PF02743 Cache domain LWM38_08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_08260 PF00672 HAMP domain LWM38_08265 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_08270 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_08275 PF00196 Bacterial regulatory proteins, luxR family LWM38_08275 PF00072 Response regulator receiver domain LWM38_08280 PF07730 Histidine kinase LWM38_08280 PF17200 Single Cache domain 2 LWM38_08285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LWM38_08295 PF03480 Bacterial extracellular solute-binding protein, family 7 LWM38_08310 PF00753 Metallo-beta-lactamase superfamily LWM38_08315 PF05951 Bacterial protein of unknown function (DUF882) LWM38_08320 PF03734 L,D-transpeptidase catalytic domain LWM38_08320 PF01471 Putative peptidoglycan binding domain LWM38_08345 PF00925 GTP cyclohydrolase II LWM38_08355 PF03918 Cytochrome C biogenesis protein LWM38_08360 PF08534 Redoxin LWM38_08365 PF01578 Cytochrome C assembly protein LWM38_08365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LWM38_08370 PF03916 Polysulphide reductase, NrfD LWM38_08375 PF13247 4Fe-4S dicluster domain LWM38_08385 PF02335 Cytochrome c552 LWM38_08390 PF00581 Rhodanese-like domain LWM38_08400 PF03989 DNA gyrase C-terminal domain, beta-propeller LWM38_08400 PF00521 DNA gyrase/topoisomerase IV, subunit A LWM38_08410 PF02867 Ribonucleotide reductase, barrel domain LWM38_08410 PF03477 ATP cone domain LWM38_08410 PF00317 Ribonucleotide reductase, all-alpha domain LWM38_08415 PF00268 Ribonucleotide reductase, small chain LWM38_08420 PF00970 Oxidoreductase FAD-binding domain LWM38_08420 PF00175 Oxidoreductase NAD-binding domain LWM38_08420 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_08430 PF02613 Nitrate reductase delta subunit LWM38_08435 PF00384 Molybdopterin oxidoreductase LWM38_08435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_08435 PF01568 Molydopterin dinucleotide binding domain LWM38_08440 PF13247 4Fe-4S dicluster domain LWM38_08440 PF12800 4Fe-4S binding domain LWM38_08445 PF04976 DMSO reductase anchor subunit (DmsC) LWM38_08450 PF00994 Probable molybdopterin binding domain LWM38_08465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LWM38_08470 PF16653 Saccharopine dehydrogenase C-terminal domain LWM38_08470 PF03435 Saccharopine dehydrogenase NADP binding domain LWM38_08475 PF00202 Aminotransferase class-III LWM38_08500 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_08505 PF01066 CDP-alcohol phosphatidyltransferase LWM38_08510 PF01541 GIY-YIG catalytic domain LWM38_08510 PF02151 UvrB/uvrC motif LWM38_08510 PF08459 UvrC Helix-hairpin-helix N-terminal LWM38_08515 PF00072 Response regulator receiver domain LWM38_08515 PF00196 Bacterial regulatory proteins, luxR family LWM38_08520 PF03104 DNA polymerase family B, exonuclease domain LWM38_08520 PF00136 DNA polymerase family B LWM38_08530 PF01132 Elongation factor P (EF-P) OB domain LWM38_08530 PF08207 Elongation factor P (EF-P) KOW-like domain LWM38_08530 PF09285 Elongation factor P, C-terminal LWM38_08535 PF04269 Protein of unknown function, DUF440 LWM38_08545 PF00849 RNA pseudouridylate synthase LWM38_08545 PF01479 S4 domain LWM38_08550 PF01300 Telomere recombination LWM38_08555 PF02811 PHP domain LWM38_08560 PF08056 Tryptophan operon leader peptide LWM38_08565 PF04715 Anthranilate synthase component I, N terminal region LWM38_08565 PF00425 chorismate binding enzyme LWM38_08570 PF00117 Glutamine amidotransferase class-I LWM38_08575 PF00591 Glycosyl transferase family, a/b domain LWM38_08575 PF02885 Glycosyl transferase family, helical bundle domain LWM38_08580 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LWM38_08580 PF00218 Indole-3-glycerol phosphate synthase LWM38_08585 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_08590 PF00290 Tryptophan synthase alpha chain LWM38_08595 PF16200 C-terminal region of band_7 LWM38_08595 PF01145 SPFH domain / Band 7 family LWM38_08605 PF00375 Sodium:dicarboxylate symporter family LWM38_08610 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_08615 PF00155 Aminotransferase class I and II LWM38_08620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_08620 PF03466 LysR substrate binding domain LWM38_08625 PF04279 Intracellular septation protein A LWM38_08630 PF03061 Thioesterase superfamily LWM38_08635 PF03795 YCII-related domain LWM38_08645 PF08267 Cobalamin-independent synthase, N-terminal domain LWM38_08645 PF01717 Cobalamin-independent synthase, Catalytic domain LWM38_08650 PF03466 LysR substrate binding domain LWM38_08650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_08665 PF04055 Radical SAM superfamily LWM38_08665 PF11842 Domain of unknown function (DUF3362) LWM38_08665 PF08497 Radical SAM N-terminal LWM38_08670 PF07883 Cupin domain LWM38_08670 PF01381 Helix-turn-helix LWM38_08675 PF03594 Benzoate membrane transport protein LWM38_08685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LWM38_08690 PF00535 Glycosyl transferase family 2 LWM38_08695 PF00072 Response regulator receiver domain LWM38_08695 PF00486 Transcriptional regulatory protein, C terminal LWM38_08715 PF01266 FAD dependent oxidoreductase LWM38_08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_08720 PF03466 LysR substrate binding domain LWM38_08730 PF06610 L-alanine exporter LWM38_08735 PF00072 Response regulator receiver domain LWM38_08735 PF09308 LuxQ, periplasmic LWM38_08735 PF00512 His Kinase A (phospho-acceptor) domain LWM38_08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_08750 PF02445 Quinolinate synthetase A protein LWM38_08755 PF16331 TolA binding protein trimerisation LWM38_08755 PF13174 Tetratricopeptide repeat LWM38_08760 PF00691 OmpA family LWM38_08765 PF04052 TolB amino-terminal domain LWM38_08765 PF07676 WD40-like Beta Propeller Repeat LWM38_08775 PF02472 Biopolymer transport protein ExbD/TolR LWM38_08780 PF01618 MotA/TolQ/ExbB proton channel family LWM38_08785 PF03061 Thioesterase superfamily LWM38_08795 PF08173 Membrane bound YbgT-like protein LWM38_08800 PF02322 Cytochrome bd terminal oxidase subunit II LWM38_08805 PF01654 Cytochrome bd terminal oxidase subunit I LWM38_08810 PF17864 RuvB AAA lid domain LWM38_08810 PF05491 RuvB C-terminal winged helix domain LWM38_08810 PF05496 Holliday junction DNA helicase RuvB P-loop domain LWM38_08815 PF01330 RuvA N terminal domain LWM38_08815 PF07499 RuvA, C-terminal domain LWM38_08820 PF02075 Crossover junction endodeoxyribonuclease RuvC LWM38_08825 PF02938 GAD domain LWM38_08825 PF01336 OB-fold nucleic acid binding domain LWM38_08825 PF00152 tRNA synthetases class II (D, K and N) LWM38_08830 PF01904 Protein of unknown function DUF72 LWM38_08835 PF13649 Methyltransferase domain LWM38_08840 PF08003 Protein of unknown function (DUF1698) LWM38_08845 PF08443 RimK-like ATP-grasp domain LWM38_08845 PF18030 RimK PreATP-grasp domain LWM38_08860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_08860 PF12838 4Fe-4S dicluster domain LWM38_08860 PF01568 Molydopterin dinucleotide binding domain LWM38_08860 PF00384 Molybdopterin oxidoreductase LWM38_08860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LWM38_08865 PF16330 MukB hinge domain LWM38_08865 PF04310 MukB N-terminal LWM38_08870 PF04288 MukE-like family LWM38_08875 PF17192 MukF middle domain LWM38_08875 PF17193 MukF C-terminal domain LWM38_08875 PF03882 MukF winged-helix domain LWM38_08880 PF13847 Methyltransferase domain LWM38_08885 PF02698 DUF218 domain LWM38_08890 PF00072 Response regulator receiver domain LWM38_08890 PF00486 Transcriptional regulatory protein, C terminal LWM38_08895 PF02613 Nitrate reductase delta subunit LWM38_08900 PF00356 Bacterial regulatory proteins, lacI family LWM38_08905 PF04994 TfoX C-terminal domain LWM38_08905 PF04993 TfoX N-terminal domain LWM38_08925 PF08323 Starch synthase catalytic domain LWM38_08925 PF00534 Glycosyl transferases group 1 LWM38_08930 PF00483 Nucleotidyl transferase LWM38_08935 PF01131 DNA topoisomerase LWM38_08935 PF01396 Topoisomerase DNA binding C4 zinc finger LWM38_08935 PF08272 Topoisomerase I zinc-ribbon-like LWM38_08935 PF01751 Toprim domain LWM38_08940 PF10692 Protein of unknown function (DUF2498) LWM38_08945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LWM38_08955 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LWM38_08960 PF04377 Arginine-tRNA-protein transferase, C terminus LWM38_08960 PF04376 Arginine-tRNA-protein transferase, N terminus LWM38_08965 PF01176 Translation initiation factor 1A / IF-1 LWM38_08970 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_08970 PF07724 AAA domain (Cdc48 subfamily) LWM38_08970 PF17871 AAA lid domain LWM38_08970 PF02861 Clp amino terminal domain, pathogenicity island component LWM38_08970 PF10431 C-terminal, D2-small domain, of ClpB protein LWM38_08975 PF02617 ATP-dependent Clp protease adaptor protein ClpS LWM38_08980 PF00313 'Cold-shock' DNA-binding domain LWM38_08985 PF03971 Monomeric isocitrate dehydrogenase LWM38_08990 PF00849 RNA pseudouridylate synthase LWM38_08995 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LWM38_09005 PF13307 Helicase C-terminal domain LWM38_09005 PF06733 DEAD_2 LWM38_09010 PF01925 Sulfite exporter TauE/SafE LWM38_09020 PF10689 Protein of unknown function (DUF2496) LWM38_09025 PF08007 Cupin superfamily protein LWM38_09030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_09030 PF00672 HAMP domain LWM38_09035 PF07690 Major Facilitator Superfamily LWM38_09040 PF00326 Prolyl oligopeptidase family LWM38_09040 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LWM38_09045 PF03372 Endonuclease/Exonuclease/phosphatase family LWM38_09050 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_09055 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_09060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_09065 PF00005 ABC transporter LWM38_09075 PF02901 Pyruvate formate lyase-like LWM38_09075 PF01228 Glycine radical LWM38_09085 PF04055 Radical SAM superfamily LWM38_09090 PF03887 YfbU domain LWM38_09095 PF08298 PrkA AAA domain LWM38_09095 PF06798 PrkA serine protein kinase C-terminal domain LWM38_09100 PF04285 Protein of unknown function (DUF444) LWM38_09105 PF04293 SpoVR like protein LWM38_09110 PF01343 Peptidase family S49 LWM38_09110 PF08496 Peptidase family S49 N-terminal LWM38_09115 PF00106 short chain dehydrogenase LWM38_09130 PF01336 OB-fold nucleic acid binding domain LWM38_09130 PF02811 PHP domain LWM38_09130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LWM38_09130 PF14579 Helix-hairpin-helix motif LWM38_09130 PF07733 Bacterial DNA polymerase III alpha NTPase domain LWM38_09135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_09140 PF01584 CheW-like domain LWM38_09140 PF00072 Response regulator receiver domain LWM38_09145 PF00480 ROK family LWM38_09150 PF00224 Pyruvate kinase, barrel domain LWM38_09150 PF02887 Pyruvate kinase, alpha/beta domain LWM38_09155 PF01734 Patatin-like phospholipase LWM38_09170 PF00367 phosphotransferase system, EIIB LWM38_09170 PF02378 Phosphotransferase system, EIIC LWM38_09175 PF01026 TatD related DNase LWM38_09180 PF09115 DNA polymerase III, delta subunit, C terminal LWM38_09185 PF02223 Thymidylate kinase LWM38_09190 PF02618 YceG-like family LWM38_09195 PF01063 Amino-transferase class IV LWM38_09200 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_09200 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_09205 PF00550 Phosphopantetheine attachment site LWM38_09215 PF00698 Acyl transferase domain LWM38_09220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LWM38_09220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LWM38_09225 PF02504 Fatty acid synthesis protein LWM38_09230 PF01783 Ribosomal L32p protein family LWM38_09235 PF02620 Large ribosomal RNA subunit accumulation protein YceD LWM38_09240 PF02545 Maf-like protein LWM38_09245 PF00849 RNA pseudouridylate synthase LWM38_09245 PF01479 S4 domain LWM38_09250 PF12111 Polyribonucleotide phosphorylase C terminal LWM38_09250 PF10150 Ribonuclease E/G family LWM38_09250 PF00575 S1 RNA binding domain LWM38_09255 PF01740 STAS domain LWM38_09255 PF00916 Sulfate permease family LWM38_09260 PF01451 Low molecular weight phosphotyrosine protein phosphatase LWM38_09265 PF12557 Cob(I)alamin adenosyltransferase N terminal LWM38_09265 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LWM38_09270 PF05170 AsmA family LWM38_09275 PF00485 Phosphoribulokinase / Uridine kinase family LWM38_09280 PF10609 NUBPL iron-transfer P-loop NTPase LWM38_09285 PF09334 tRNA synthetases class I (M) LWM38_09285 PF01588 Putative tRNA binding domain LWM38_09295 PF07840 FadR C-terminal domain LWM38_09295 PF00392 Bacterial regulatory proteins, gntR family LWM38_09300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LWM38_09305 PF02600 Disulfide bond formation protein DsbB LWM38_09310 PF02810 SEC-C motif LWM38_09310 PF01043 SecA preprotein cross-linking domain LWM38_09310 PF07517 SecA DEAD-like domain LWM38_09310 PF07516 SecA Wing and Scaffold domain LWM38_09315 PF01207 Dihydrouridine synthase (Dus) LWM38_09320 PF05230 MASE2 domain LWM38_09320 PF00990 Diguanylate cyclase, GGDEF domain LWM38_09330 PF04217 Protein of unknown function, DUF412 LWM38_09335 PF00871 Acetokinase family LWM38_09340 PF07085 DRTGG domain LWM38_09340 PF01515 Phosphate acetyl/butaryl transferase LWM38_09345 PF13409 Glutathione S-transferase, N-terminal domain LWM38_09350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_09350 PF00005 ABC transporter LWM38_09355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_09355 PF00005 ABC transporter LWM38_09360 PF12911 N-terminal TM domain of oligopeptide transport permease C LWM38_09360 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_09365 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_09370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_09375 PF02391 MoaE protein LWM38_09380 PF02597 ThiS family LWM38_09385 PF01967 MoaC family LWM38_09390 PF00994 Probable molybdopterin binding domain LWM38_09395 PF04055 Radical SAM superfamily LWM38_09395 PF06463 Molybdenum Cofactor Synthesis C LWM38_09400 PF01933 Uncharacterised protein family UPF0052 LWM38_09405 PF01627 Hpt domain LWM38_09410 PF02954 Bacterial regulatory protein, Fis family LWM38_09410 PF00072 Response regulator receiver domain LWM38_09410 PF00158 Sigma-54 interaction domain LWM38_09415 PF00271 Helicase conserved C-terminal domain LWM38_09415 PF04851 Type III restriction enzyme, res subunit LWM38_09415 PF02151 UvrB/uvrC motif LWM38_09415 PF12344 Ultra-violet resistance protein B LWM38_09415 PF17757 UvrB interaction domain LWM38_09425 PF02508 Rnf-Nqr subunit, membrane protein LWM38_09430 PF04060 Putative Fe-S cluster LWM38_09435 PF10531 SLBB domain LWM38_09435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LWM38_09435 PF12838 4Fe-4S dicluster domain LWM38_09435 PF13375 RnfC Barrel sandwich hybrid domain LWM38_09440 PF03116 NQR2, RnfD, RnfE family LWM38_09445 PF04205 FMN-binding domain LWM38_09450 PF02508 Rnf-Nqr subunit, membrane protein LWM38_09455 PF00633 Helix-hairpin-helix motif LWM38_09455 PF10576 Iron-sulfur binding domain of endonuclease III LWM38_09455 PF00730 HhH-GPD superfamily base excision DNA repair protein LWM38_09460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LWM38_09465 PF10952 Protein of unknown function (DUF2753) LWM38_09470 PF00691 OmpA family LWM38_09470 PF18393 MotY N-terminal domain LWM38_09475 PF00929 Exonuclease LWM38_09480 PF03553 Na+/H+ antiporter family LWM38_09480 PF13726 Na+-H+ antiporter family LWM38_09490 PF00462 Glutaredoxin LWM38_09495 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LWM38_09495 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LWM38_09510 PF00465 Iron-containing alcohol dehydrogenase LWM38_09510 PF00171 Aldehyde dehydrogenase family LWM38_09515 PF01914 MarC family integral membrane protein LWM38_09520 PF00520 Ion transport protein LWM38_09520 PF00027 Cyclic nucleotide-binding domain LWM38_09525 PF01118 Semialdehyde dehydrogenase, NAD binding domain LWM38_09525 PF02774 Semialdehyde dehydrogenase, dimerisation domain LWM38_09530 PF03553 Na+/H+ antiporter family LWM38_09545 PF04245 37-kD nucleoid-associated bacterial protein LWM38_09550 PF07208 Protein of unknown function (DUF1414) LWM38_09555 PF11893 Domain of unknown function (DUF3413) LWM38_09555 PF00884 Sulfatase LWM38_09565 PF12729 Four helix bundle sensory module for signal transduction LWM38_09565 PF00672 HAMP domain LWM38_09565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_09570 PF00850 Histone deacetylase domain LWM38_09575 PF00106 short chain dehydrogenase LWM38_09585 PF01131 DNA topoisomerase LWM38_09585 PF01751 Toprim domain LWM38_09590 PF00881 Nitroreductase family LWM38_09595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LWM38_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_09600 PF01343 Peptidase family S49 LWM38_09605 PF00710 Asparaginase, N-terminal LWM38_09605 PF17763 Glutaminase/Asparaginase C-terminal domain LWM38_09610 PF07023 Protein of unknown function (DUF1315) LWM38_09620 PF01641 SelR domain LWM38_09625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LWM38_09625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LWM38_09630 PF01263 Aldose 1-epimerase LWM38_09635 PF01156 Inosine-uridine preferring nucleoside hydrolase LWM38_09640 PF13847 Methyltransferase domain LWM38_09655 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_09660 PF00245 Alkaline phosphatase LWM38_09665 PF02423 Ornithine cyclodeaminase/mu-crystallin family LWM38_09670 PF00360 Phytochrome region LWM38_09670 PF01590 GAF domain LWM38_09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_09670 PF00512 His Kinase A (phospho-acceptor) domain LWM38_09670 PF08446 PAS fold LWM38_09675 PF00196 Bacterial regulatory proteins, luxR family LWM38_09675 PF00072 Response regulator receiver domain LWM38_09680 PF03707 Bacterial signalling protein N terminal repeat LWM38_09680 PF00563 EAL domain LWM38_09680 PF00990 Diguanylate cyclase, GGDEF domain LWM38_09695 PF00990 Diguanylate cyclase, GGDEF domain LWM38_09695 PF17158 Membrane-associated sensor, integral membrane domain LWM38_09720 PF03692 Putative zinc- or iron-chelating domain LWM38_09725 PF03692 Putative zinc- or iron-chelating domain LWM38_09730 PF02132 RecR protein LWM38_09730 PF13662 Toprim domain LWM38_09735 PF02575 YbaB/EbfC DNA-binding family LWM38_09740 PF12170 DNA polymerase III tau subunit V interacting with alpha LWM38_09740 PF12169 DNA polymerase III subunits gamma and tau domain III LWM38_09745 PF00156 Phosphoribosyl transferase domain LWM38_09750 PF04304 Protein of unknown function (DUF454) LWM38_09760 PF00072 Response regulator receiver domain LWM38_09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_09765 PF03466 LysR substrate binding domain LWM38_09770 PF00156 Phosphoribosyl transferase domain LWM38_09775 PF02674 Colicin V production protein LWM38_09780 PF05036 Sporulation related domain LWM38_09785 PF08245 Mur ligase middle domain LWM38_09785 PF02875 Mur ligase family, glutamate ligase domain LWM38_09790 PF17848 Acetyl-coA carboxylase zinc finger domain LWM38_09790 PF01039 Carboxyl transferase domain LWM38_09795 PF01416 tRNA pseudouridine synthase LWM38_09805 PF01118 Semialdehyde dehydrogenase, NAD binding domain LWM38_09805 PF02774 Semialdehyde dehydrogenase, dimerisation domain LWM38_09810 PF11890 Domain of unknown function (DUF3410) LWM38_09810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_09810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_09815 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_09815 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_09820 PF01266 FAD dependent oxidoreductase LWM38_09820 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LWM38_09825 PF03358 NADPH-dependent FMN reductase LWM38_09830 PF08891 YfcL protein LWM38_09835 PF04315 Elongation factor P hydroxylase LWM38_09840 PF03458 UPF0126 domain LWM38_09845 PF01264 Chorismate synthase LWM38_09860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LWM38_09860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LWM38_09865 PF01773 Na+ dependent nucleoside transporter N-terminus LWM38_09865 PF07662 Na+ dependent nucleoside transporter C-terminus LWM38_09865 PF07670 Nucleoside recognition LWM38_09870 PF03466 LysR substrate binding domain LWM38_09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_09875 PF13406 Transglycosylase SLT domain LWM38_09880 PF05166 YcgL domain LWM38_09885 PF05209 Septum formation inhibitor MinC, N-terminal domain LWM38_09885 PF03775 Septum formation inhibitor MinC, C-terminal domain LWM38_09890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LWM38_09895 PF03776 Septum formation topological specificity factor MinE LWM38_09900 PF01612 3'-5' exonuclease LWM38_09900 PF00570 HRDC domain LWM38_09905 PF00501 AMP-binding enzyme LWM38_09905 PF13193 AMP-binding enzyme C-terminal domain LWM38_09910 PF00561 alpha/beta hydrolase fold LWM38_09925 PF00814 Glycoprotease family LWM38_09930 PF04851 Type III restriction enzyme, res subunit LWM38_09930 PF13307 Helicase C-terminal domain LWM38_09935 PF01842 ACT domain LWM38_09935 PF00551 Formyl transferase LWM38_09940 PF06185 YecM protein LWM38_09945 PF03485 Arginyl tRNA synthetase N terminal domain LWM38_09945 PF00750 tRNA synthetases class I (R) LWM38_09945 PF05746 DALR anticodon binding domain LWM38_09960 PF07664 Ferrous iron transport protein B C terminus LWM38_09960 PF02421 Ferrous iron transport protein B LWM38_09960 PF07670 Nucleoside recognition LWM38_09965 PF04023 FeoA domain LWM38_09970 PF12833 Helix-turn-helix domain LWM38_09975 PF01297 Zinc-uptake complex component A periplasmic LWM38_09980 PF00005 ABC transporter LWM38_09985 PF00950 ABC 3 transport family LWM38_09990 PF00549 CoA-ligase LWM38_09990 PF02629 CoA binding domain LWM38_09995 PF08442 ATP-grasp domain LWM38_09995 PF00549 CoA-ligase LWM38_10000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LWM38_10000 PF00364 Biotin-requiring enzyme LWM38_10000 PF02817 e3 binding domain LWM38_10005 PF16078 2-oxoglutarate dehydrogenase N-terminus LWM38_10005 PF02779 Transketolase, pyrimidine binding domain LWM38_10005 PF00676 Dehydrogenase E1 component LWM38_10005 PF16870 2-oxoglutarate dehydrogenase C-terminal LWM38_10010 PF13085 2Fe-2S iron-sulfur cluster binding domain LWM38_10015 PF00890 FAD binding domain LWM38_10015 PF02910 Fumarate reductase flavoprotein C-term LWM38_10020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LWM38_10025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LWM38_10030 PF00285 Citrate synthase, C-terminal domain LWM38_10035 PF01784 NIF3 (NGG1p interacting factor 3) LWM38_10045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LWM38_10045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LWM38_10045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LWM38_10045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LWM38_10050 PF03925 SeqA protein C-terminal domain LWM38_10050 PF17206 SeqA protein N-terminal domain LWM38_10055 PF12697 Alpha/beta hydrolase family LWM38_10065 PF00258 Flavodoxin LWM38_10075 PF01475 Ferric uptake regulator family LWM38_10080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LWM38_10080 PF00749 tRNA synthetases class I (E and Q), catalytic domain LWM38_10085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LWM38_10085 PF00367 phosphotransferase system, EIIB LWM38_10085 PF02378 Phosphotransferase system, EIIC LWM38_10090 PF01979 Amidohydrolase family LWM38_10095 PF01047 MarR family LWM38_10095 PF00480 ROK family LWM38_10100 PF00999 Sodium/hydrogen exchanger family LWM38_10100 PF02254 TrkA-N domain LWM38_10105 PF13537 Glutamine amidotransferase domain LWM38_10105 PF00733 Asparagine synthase LWM38_10110 PF02357 Transcription termination factor nusG LWM38_10120 PF00762 Ferrochelatase LWM38_10125 PF05191 Adenylate kinase, active site lid LWM38_10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_10130 PF00183 Hsp90 protein LWM38_10135 PF00486 Transcriptional regulatory protein, C terminal LWM38_10140 PF17323 Trans-membrane regulatory protein ToxS LWM38_10155 PF12850 Calcineurin-like phosphoesterase superfamily domain LWM38_10170 PF07556 Protein of unknown function (DUF1538) LWM38_10175 PF07556 Protein of unknown function (DUF1538) LWM38_10180 PF01370 NAD dependent epimerase/dehydratase family LWM38_10180 PF08338 Domain of unknown function (DUF1731) LWM38_10185 PF00106 short chain dehydrogenase LWM38_10190 PF00085 Thioredoxin LWM38_10195 PF16200 C-terminal region of band_7 LWM38_10195 PF01145 SPFH domain / Band 7 family LWM38_10200 PF01957 NfeD-like C-terminal, partner-binding LWM38_10205 PF13411 MerR HTH family regulatory protein LWM38_10215 PF13609 Gram-negative porin LWM38_10220 PF00533 BRCA1 C Terminus (BRCT) domain LWM38_10220 PF01653 NAD-dependent DNA ligase adenylation domain LWM38_10220 PF03120 NAD-dependent DNA ligase OB-fold domain LWM38_10220 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LWM38_10220 PF12826 Helix-hairpin-helix motif LWM38_10225 PF04354 ZipA, C-terminal FtsZ-binding domain LWM38_10235 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_10240 PF00381 PTS HPr component phosphorylation site LWM38_10245 PF00391 PEP-utilising enzyme, mobile domain LWM38_10245 PF02896 PEP-utilising enzyme, TIM barrel domain LWM38_10245 PF05524 PEP-utilising enzyme, N-terminal LWM38_10250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LWM38_10255 PF00669 Bacterial flagellin N-terminal helical region LWM38_10255 PF07196 Flagellin hook IN motif LWM38_10255 PF00700 Bacterial flagellin C-terminal helical region LWM38_10260 PF00700 Bacterial flagellin C-terminal helical region LWM38_10260 PF07196 Flagellin hook IN motif LWM38_10260 PF00669 Bacterial flagellin N-terminal helical region LWM38_10265 PF04261 Dyp-type peroxidase family LWM38_10270 PF11143 Protein of unknown function (DUF2919) LWM38_10295 PF08443 RimK-like ATP-grasp domain LWM38_10295 PF18030 RimK PreATP-grasp domain LWM38_10305 PF03960 ArsC family LWM38_10310 PF07687 Peptidase dimerisation domain LWM38_10310 PF01546 Peptidase family M20/M25/M40 LWM38_10325 PF06804 NlpB/DapX lipoprotein LWM38_10330 PF00701 Dihydrodipicolinate synthetase family LWM38_10335 PF01842 ACT domain LWM38_10340 PF00578 AhpC/TSA family LWM38_10345 PF01594 AI-2E family transporter LWM38_10355 PF01435 Peptidase family M48 LWM38_10355 PF13181 Tetratricopeptide repeat LWM38_10360 PF03960 ArsC family LWM38_10365 PF03358 NADPH-dependent FMN reductase LWM38_10380 PF00860 Permease family LWM38_10390 PF00586 AIR synthase related protein, N-terminal domain LWM38_10390 PF02769 AIR synthase related protein, C-terminal domain LWM38_10395 PF00551 Formyl transferase LWM38_10400 PF13230 Glutamine amidotransferases class-II LWM38_10405 PF13580 SIS domain LWM38_10410 PF09317 Domain of unknown function (DUF1974) LWM38_10410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LWM38_10410 PF02770 Acyl-CoA dehydrogenase, middle domain LWM38_10410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LWM38_10420 PF00929 Exonuclease LWM38_10425 PF00075 RNase H LWM38_10430 PF08241 Methyltransferase domain LWM38_10435 PF16123 Hydroxyacylglutathione hydrolase C-terminus LWM38_10435 PF00753 Metallo-beta-lactamase superfamily LWM38_10440 PF01476 LysM domain LWM38_10440 PF01464 Transglycosylase SLT domain LWM38_10450 PF03372 Endonuclease/Exonuclease/phosphatase family LWM38_10455 PF00543 Nitrogen regulatory protein P-II LWM38_10460 PF00034 Cytochrome c LWM38_10465 PF01171 PP-loop family LWM38_10465 PF09179 TilS substrate binding domain LWM38_10465 PF11734 TilS substrate C-terminal domain LWM38_10470 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LWM38_10475 PF14579 Helix-hairpin-helix motif LWM38_10475 PF07733 Bacterial DNA polymerase III alpha NTPase domain LWM38_10475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LWM38_10475 PF02811 PHP domain LWM38_10475 PF01336 OB-fold nucleic acid binding domain LWM38_10480 PF01351 Ribonuclease HII LWM38_10485 PF02684 Lipid-A-disaccharide synthetase LWM38_10490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LWM38_10490 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_10495 PF07977 FabA-like domain LWM38_10500 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_10500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LWM38_10505 PF03938 Outer membrane protein (OmpH-like) LWM38_10510 PF07244 Surface antigen variable number repeat LWM38_10510 PF01103 Surface antigen LWM38_10515 PF17820 PDZ domain LWM38_10515 PF02163 Peptidase family M50 LWM38_10520 PF13288 DXP reductoisomerase C-terminal domain LWM38_10520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LWM38_10520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LWM38_10530 PF01255 Putative undecaprenyl diphosphate synthase LWM38_10535 PF01765 Ribosome recycling factor LWM38_10540 PF00696 Amino acid kinase family LWM38_10545 PF00889 Elongation factor TS LWM38_10550 PF00318 Ribosomal protein S2 LWM38_10555 PF00557 Metallopeptidase family M24 LWM38_10560 PF01966 HD domain LWM38_10560 PF08335 GlnD PII-uridylyltransferase LWM38_10560 PF01842 ACT domain LWM38_10560 PF01909 Nucleotidyltransferase domain LWM38_10565 PF11944 Protein of unknown function (DUF3461) LWM38_10570 PF00849 RNA pseudouridylate synthase LWM38_10575 PF04287 tRNA pseudouridine synthase C LWM38_10595 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LWM38_10600 PF03806 AbgT putative transporter family LWM38_10605 PF00444 Ribosomal protein L36 LWM38_10610 PF01197 Ribosomal protein L31 LWM38_10615 PF01980 tRNA-methyltransferase O LWM38_10615 PF18389 TrmO C-terminal domain LWM38_10620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LWM38_10620 PF04073 Aminoacyl-tRNA editing domain LWM38_10620 PF03129 Anticodon binding domain LWM38_10630 PF06786 Uncharacterised protein family (UPF0253) LWM38_10645 PF00464 Serine hydroxymethyltransferase LWM38_10675 PF16657 Maltogenic Amylase, C-terminal domain LWM38_10675 PF00128 Alpha amylase, catalytic domain LWM38_10680 PF00367 phosphotransferase system, EIIB LWM38_10680 PF02378 Phosphotransferase system, EIIC LWM38_10685 PF00356 Bacterial regulatory proteins, lacI family LWM38_10700 PF09383 NIL domain LWM38_10700 PF00005 ABC transporter LWM38_10705 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_10710 PF03180 NLPA lipoprotein LWM38_10715 PF02264 LamB porin LWM38_10720 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LWM38_10725 PF07348 Syd protein (SUKH-2) LWM38_10730 PF14489 QueF-like protein LWM38_10730 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LWM38_10740 PF00990 Diguanylate cyclase, GGDEF domain LWM38_10745 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LWM38_10745 PF03641 Possible lysine decarboxylase LWM38_10745 PF11892 Domain of unknown function (DUF3412) LWM38_10750 PF01367 5'-3' exonuclease, C-terminal SAM fold LWM38_10750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LWM38_10755 PF01728 FtsJ-like methyltransferase LWM38_10755 PF18125 RlmM ferredoxin-like domain LWM38_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_10770 PF03466 LysR substrate binding domain LWM38_10775 PF02926 THUMP domain LWM38_10775 PF02568 Thiamine biosynthesis protein (ThiI) LWM38_10780 PF00691 OmpA family LWM38_10780 PF13677 Membrane MotB of proton-channel complex MotA/MotB LWM38_10785 PF01618 MotA/TolQ/ExbB proton channel family LWM38_10790 PF02609 Exonuclease VII small subunit LWM38_10795 PF00348 Polyprenyl synthetase LWM38_10800 PF02779 Transketolase, pyrimidine binding domain LWM38_10800 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LWM38_10800 PF02780 Transketolase, C-terminal domain LWM38_10810 PF04608 Phosphatidylglycerophosphatase A LWM38_10815 PF02769 AIR synthase related protein, C-terminal domain LWM38_10815 PF00586 AIR synthase related protein, N-terminal domain LWM38_10820 PF01029 NusB family LWM38_10825 PF00885 6,7-dimethyl-8-ribityllumazine synthase LWM38_10830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LWM38_10830 PF00925 GTP cyclohydrolase II LWM38_10835 PF00677 Lumazine binding domain LWM38_10840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LWM38_10840 PF01872 RibD C-terminal domain LWM38_10845 PF03477 ATP cone domain LWM38_10850 PF00171 Aldehyde dehydrogenase family LWM38_10855 PF00696 Amino acid kinase family LWM38_10855 PF01472 PUA domain LWM38_10860 PF07417 Sigma factor-binding transcriptional regulator Crl LWM38_10865 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) LWM38_10870 PF00156 Phosphoribosyl transferase domain LWM38_10875 PF00860 Permease family LWM38_10880 PF07687 Peptidase dimerisation domain LWM38_10880 PF01546 Peptidase family M20/M25/M40 LWM38_10910 PF01588 Putative tRNA binding domain LWM38_10915 PF00356 Bacterial regulatory proteins, lacI family LWM38_10920 PF01263 Aldose 1-epimerase LWM38_10925 PF10509 Galactokinase galactose-binding signature LWM38_10925 PF08544 GHMP kinases C terminal LWM38_10925 PF00288 GHMP kinases N terminal domain LWM38_10930 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LWM38_10930 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LWM38_10935 PF16363 GDP-mannose 4,6 dehydratase LWM38_10940 PF00356 Bacterial regulatory proteins, lacI family LWM38_10945 PF06483 Chitinase C LWM38_10945 PF00704 Glycosyl hydrolases family 18 LWM38_10950 PF00958 GMP synthase C terminal domain LWM38_10950 PF00117 Glutamine amidotransferase class-I LWM38_10950 PF02540 NAD synthase LWM38_10955 PF00478 IMP dehydrogenase / GMP reductase domain LWM38_10955 PF00571 CBS domain LWM38_10960 PF13742 OB-fold nucleic acid binding domain LWM38_10960 PF02601 Exonuclease VII, large subunit LWM38_10965 PF02492 CobW/HypB/UreG, nucleotide-binding domain LWM38_10970 PF01730 UreF LWM38_10980 PF05194 UreE urease accessory protein, C-terminal domain LWM38_10980 PF02814 UreE urease accessory protein, N-terminal domain LWM38_10985 PF01979 Amidohydrolase family LWM38_10985 PF00449 Urease alpha-subunit, N-terminal domain LWM38_10990 PF00699 Urease beta subunit LWM38_10995 PF00547 Urease, gamma subunit LWM38_11000 PF01774 UreD urease accessory protein LWM38_11005 PF00005 ABC transporter LWM38_11010 PF00005 ABC transporter LWM38_11010 PF12399 Branched-chain amino acid ATP-binding cassette transporter LWM38_11020 PF02653 Branched-chain amino acid transport system / permease component LWM38_11040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LWM38_11040 PF01926 50S ribosome-binding GTPase LWM38_11045 PF13360 PQQ-like domain LWM38_11050 PF09976 Tetratricopeptide repeat-like domain LWM38_11055 PF03129 Anticodon binding domain LWM38_11055 PF13393 Histidyl-tRNA synthetase LWM38_11060 PF04551 GcpE protein LWM38_11065 PF13464 Domain of unknown function (DUF4115) LWM38_11070 PF04055 Radical SAM superfamily LWM38_11075 PF00334 Nucleoside diphosphate kinase LWM38_11080 PF12404 Peptidase LWM38_11080 PF00883 Cytosol aminopeptidase family, catalytic domain LWM38_11085 PF04384 Iron-sulphur cluster assembly LWM38_11090 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_11095 PF00012 Hsp70 protein LWM38_11100 PF00226 DnaJ domain LWM38_11100 PF07743 HSCB C-terminal oligomerisation domain LWM38_11105 PF01521 Iron-sulphur cluster biosynthesis LWM38_11110 PF01592 NifU-like N terminal domain LWM38_11115 PF00266 Aminotransferase class-V LWM38_11120 PF02082 Transcriptional regulator LWM38_11125 PF00588 SpoU rRNA Methylase family LWM38_11130 PF00459 Inositol monophosphatase family LWM38_11135 PF07549 SecD/SecF GG Motif LWM38_11135 PF02355 Protein export membrane protein LWM38_11140 PF07549 SecD/SecF GG Motif LWM38_11140 PF13721 SecD export protein N-terminal TM region LWM38_11140 PF02355 Protein export membrane protein LWM38_11145 PF02699 Preprotein translocase subunit LWM38_11150 PF01702 Queuine tRNA-ribosyltransferase LWM38_11155 PF02547 Queuosine biosynthesis protein LWM38_11160 PF00571 CBS domain LWM38_11165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_11170 PF03466 LysR substrate binding domain LWM38_11175 PF00578 AhpC/TSA family LWM38_11175 PF10417 C-terminal domain of 1-Cys peroxiredoxin LWM38_11180 PF03932 CutC family LWM38_11185 PF01895 PhoU domain LWM38_11190 PF00005 ABC transporter LWM38_11195 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_11200 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_11205 PF02503 Polyphosphate kinase middle domain LWM38_11205 PF13090 Polyphosphate kinase C-terminal domain 2 LWM38_11205 PF17941 Polyphosphate kinase C-terminal domain 1 LWM38_11205 PF13089 Polyphosphate kinase N-terminal domain LWM38_11210 PF02541 Ppx/GppA phosphatase family LWM38_11215 PF12849 PBP superfamily domain LWM38_11220 PF11808 Phosphate regulon sensor protein PhoR LWM38_11220 PF00989 PAS fold LWM38_11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_11220 PF00512 His Kinase A (phospho-acceptor) domain LWM38_11225 PF00072 Response regulator receiver domain LWM38_11225 PF00486 Transcriptional regulatory protein, C terminal LWM38_11230 PF04381 Putative exonuclease, RdgC LWM38_11235 PF01136 Peptidase family U32 LWM38_11235 PF16325 Peptidase family U32 C-terminal domain LWM38_11240 PF12838 4Fe-4S dicluster domain LWM38_11245 PF03411 Penicillin-insensitive murein endopeptidase LWM38_11285 PF00004 ATPase family associated with various cellular activities (AAA) LWM38_11285 PF07724 AAA domain (Cdc48 subfamily) LWM38_11285 PF17871 AAA lid domain LWM38_11285 PF02861 Clp amino terminal domain, pathogenicity island component LWM38_11285 PF10431 C-terminal, D2-small domain, of ClpB protein LWM38_11290 PF02578 Multi-copper polyphenol oxidoreductase laccase LWM38_11295 PF01479 S4 domain LWM38_11295 PF00849 RNA pseudouridylate synthase LWM38_11300 PF13525 Outer membrane lipoprotein LWM38_11305 PF01464 Transglycosylase SLT domain LWM38_11310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LWM38_11315 PF01817 Chorismate mutase type II LWM38_11315 PF00800 Prephenate dehydratase LWM38_11320 PF00563 EAL domain LWM38_11320 PF00990 Diguanylate cyclase, GGDEF domain LWM38_11325 PF01931 Protein of unknown function DUF84 LWM38_11330 PF01371 Trp repressor protein LWM38_11335 PF01464 Transglycosylase SLT domain LWM38_11335 PF14718 Soluble lytic murein transglycosylase L domain LWM38_11340 PF00005 ABC transporter LWM38_11340 PF12848 ABC transporter LWM38_11345 PF07238 PilZ domain LWM38_11350 PF04225 Opacity-associated protein A LysM-like domain LWM38_11350 PF01551 Peptidase family M23 LWM38_11355 PF02153 Prephenate dehydrogenase LWM38_11355 PF01817 Chorismate mutase type II LWM38_11360 PF00793 DAHP synthetase I family LWM38_11365 PF00933 Glycosyl hydrolase family 3 N terminal domain LWM38_11370 PF01418 Helix-turn-helix domain, rpiR family LWM38_11370 PF01380 SIS domain LWM38_11380 PF01869 BadF/BadG/BcrA/BcrD ATPase family LWM38_11385 PF03702 Anhydro-N-acetylmuramic acid kinase LWM38_11390 PF13580 SIS domain LWM38_11400 PF02554 Carbon starvation protein CstA LWM38_11405 PF06580 Histidine kinase LWM38_11405 PF07694 5TMR of 5TMR-LYT LWM38_11410 PF04397 LytTr DNA-binding domain LWM38_11410 PF00072 Response regulator receiver domain LWM38_11415 PF02401 LytB protein LWM38_11420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_11425 PF01252 Signal peptidase (SPase) II LWM38_11430 PF08264 Anticodon-binding domain of tRNA LWM38_11430 PF00133 tRNA synthetases class I (I, L, M and V) LWM38_11430 PF06827 Zinc finger found in FPG and IleRS LWM38_11435 PF06574 FAD synthetase LWM38_11435 PF01687 Riboflavin kinase LWM38_11440 PF03023 Lipid II flippase MurJ LWM38_11445 PF01649 Ribosomal protein S20 LWM38_11450 PF01022 Bacterial regulatory protein, arsR family LWM38_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_11455 PF03466 LysR substrate binding domain LWM38_11460 PF02690 Na+/Pi-cotransporter LWM38_11465 PF00303 Thymidylate synthase LWM38_11470 PF01790 Prolipoprotein diacylglyceryl transferase LWM38_11475 PF01925 Sulfite exporter TauE/SafE LWM38_11480 PF05524 PEP-utilising enzyme, N-terminal LWM38_11480 PF01590 GAF domain LWM38_11480 PF00391 PEP-utilising enzyme, mobile domain LWM38_11480 PF02896 PEP-utilising enzyme, TIM barrel domain LWM38_11485 PF00293 NUDIX domain LWM38_11490 PF02976 DNA mismatch repair enzyme MutH LWM38_11505 PF00158 Sigma-54 interaction domain LWM38_11505 PF06505 Activator of aromatic catabolism LWM38_11505 PF02954 Bacterial regulatory protein, Fis family LWM38_11505 PF02830 V4R domain LWM38_11510 PF01336 OB-fold nucleic acid binding domain LWM38_11510 PF00152 tRNA synthetases class II (D, K and N) LWM38_11520 PF02272 DHHA1 domain LWM38_11520 PF01368 DHH family LWM38_11520 PF17768 RecJ OB domain LWM38_11525 PF13098 Thioredoxin-like domain LWM38_11525 PF10411 Disulfide bond isomerase protein N-terminus LWM38_11530 PF02899 Phage integrase, N-terminal SAM-like domain LWM38_11530 PF00589 Phage integrase family LWM38_11535 PF00258 Flavodoxin LWM38_11540 PF05525 Branched-chain amino acid transport protein LWM38_11545 PF05175 Methyltransferase small domain LWM38_11550 PF00270 DEAD/DEAH box helicase LWM38_11550 PF00271 Helicase conserved C-terminal domain LWM38_11555 PF03883 Peroxide stress protein YaaA LWM38_11560 PF01235 Sodium:alanine symporter family LWM38_11575 PF03167 Uracil DNA glycosylase superfamily LWM38_11580 PF01261 Xylose isomerase-like TIM barrel LWM38_11585 PF01228 Glycine radical LWM38_11590 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_11590 PF14821 Threonine synthase N terminus LWM38_11595 PF00288 GHMP kinases N terminal domain LWM38_11595 PF08544 GHMP kinases C terminal LWM38_11600 PF00696 Amino acid kinase family LWM38_11600 PF01842 ACT domain LWM38_11600 PF13840 ACT domain LWM38_11600 PF00742 Homoserine dehydrogenase LWM38_11600 PF03447 Homoserine dehydrogenase, NAD binding domain LWM38_11610 PF03737 Aldolase/RraA LWM38_11615 PF00072 Response regulator receiver domain LWM38_11615 PF00486 Transcriptional regulatory protein, C terminal LWM38_11625 PF00989 PAS fold LWM38_11625 PF00072 Response regulator receiver domain LWM38_11625 PF01627 Hpt domain LWM38_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_11625 PF00512 His Kinase A (phospho-acceptor) domain LWM38_11625 PF18415 Histidine kinase receptor ArcB trans-membrane domain LWM38_11630 PF00360 Phytochrome region LWM38_11630 PF00990 Diguanylate cyclase, GGDEF domain LWM38_11630 PF01590 GAF domain LWM38_11630 PF00563 EAL domain LWM38_11635 PF04055 Radical SAM superfamily LWM38_11635 PF16199 Radical_SAM C-terminal domain LWM38_11640 PF00310 Glutamine amidotransferases class-II LWM38_11640 PF04898 Glutamate synthase central domain LWM38_11640 PF01645 Conserved region in glutamate synthase LWM38_11640 PF01493 GXGXG motif LWM38_11645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LWM38_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_11650 PF00310 Glutamine amidotransferases class-II LWM38_11650 PF04898 Glutamate synthase central domain LWM38_11650 PF01645 Conserved region in glutamate synthase LWM38_11650 PF01493 GXGXG motif LWM38_11655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_11655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LWM38_11665 PF01048 Phosphorylase superfamily LWM38_11675 PF01497 Periplasmic binding protein LWM38_11680 PF03458 UPF0126 domain LWM38_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_11685 PF03466 LysR substrate binding domain LWM38_11690 PF01925 Sulfite exporter TauE/SafE LWM38_11695 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LWM38_11695 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LWM38_11695 PF02142 MGS-like domain LWM38_11700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LWM38_11700 PF00117 Glutamine amidotransferase class-I LWM38_11705 PF05173 Dihydrodipicolinate reductase, C-terminus LWM38_11705 PF01113 Dihydrodipicolinate reductase, N-terminus LWM38_11710 PF00293 NUDIX domain LWM38_11715 PF07516 SecA Wing and Scaffold domain LWM38_11715 PF01043 SecA preprotein cross-linking domain LWM38_11715 PF02810 SEC-C motif LWM38_11715 PF07517 SecA DEAD-like domain LWM38_11720 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LWM38_11725 PF12327 FtsZ family, C-terminal domain LWM38_11725 PF00091 Tubulin/FtsZ family, GTPase domain LWM38_11730 PF02491 SHS2 domain inserted in FTSA LWM38_11735 PF08478 POTRA domain, FtsQ-type LWM38_11735 PF03799 Cell division protein FtsQ LWM38_11740 PF08245 Mur ligase middle domain LWM38_11740 PF02875 Mur ligase family, glutamate ligase domain LWM38_11740 PF01225 Mur ligase family, catalytic domain LWM38_11745 PF03033 Glycosyltransferase family 28 N-terminal domain LWM38_11745 PF04101 Glycosyltransferase family 28 C-terminal domain LWM38_11750 PF01098 Cell cycle protein LWM38_11755 PF02875 Mur ligase family, glutamate ligase domain LWM38_11755 PF08245 Mur ligase middle domain LWM38_11760 PF00953 Glycosyl transferase family 4 LWM38_11760 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LWM38_11765 PF08245 Mur ligase middle domain LWM38_11765 PF01225 Mur ligase family, catalytic domain LWM38_11765 PF02875 Mur ligase family, glutamate ligase domain LWM38_11770 PF08245 Mur ligase middle domain LWM38_11770 PF01225 Mur ligase family, catalytic domain LWM38_11770 PF02875 Mur ligase family, glutamate ligase domain LWM38_11775 PF03717 Penicillin-binding Protein dimerisation domain LWM38_11775 PF00905 Penicillin binding protein transpeptidase domain LWM38_11780 PF04999 Cell division protein FtsL LWM38_11785 PF01795 MraW methylase family LWM38_11795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LWM38_11800 PF04348 LppC putative lipoprotein LWM38_11805 PF02021 Uncharacterised protein family UPF0102 LWM38_11810 PF13580 SIS domain LWM38_11815 PF04972 BON domain LWM38_11820 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_11825 PF04386 Stringent starvation protein B LWM38_11830 PF02798 Glutathione S-transferase, N-terminal domain LWM38_11830 PF00043 Glutathione S-transferase, C-terminal domain LWM38_11835 PF02167 Cytochrome C1 family LWM38_11840 PF00033 Cytochrome b/b6/petB LWM38_11840 PF00032 Cytochrome b(C-terminal)/b6/petD LWM38_11845 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LWM38_11845 PF00355 Rieske [2Fe-2S] domain LWM38_11850 PF00380 Ribosomal protein S9/S16 LWM38_11855 PF00572 Ribosomal protein L13 LWM38_11860 PF03969 AFG1-like ATPase LWM38_11865 PF06295 Protein of unknown function (DUF1043) LWM38_11870 PF00595 PDZ domain LWM38_11875 PF13180 PDZ domain LWM38_11880 PF03989 DNA gyrase C-terminal domain, beta-propeller LWM38_11880 PF00521 DNA gyrase/topoisomerase IV, subunit A LWM38_11885 PF00204 DNA gyrase B LWM38_11885 PF00986 DNA gyrase B subunit, carboxyl terminus LWM38_11885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_11885 PF01751 Toprim domain LWM38_11890 PF05728 Uncharacterised protein family (UPF0227) LWM38_11895 PF00149 Calcineurin-like phosphoesterase LWM38_11900 PF06853 Protein of unknown function (DUF1249) LWM38_11905 PF00293 NUDIX domain LWM38_11910 PF02321 Outer membrane efflux protein LWM38_11915 PF01467 Cytidylyltransferase-like LWM38_11915 PF00294 pfkB family carbohydrate kinase LWM38_11920 PF08335 GlnD PII-uridylyltransferase LWM38_11920 PF03710 Glutamate-ammonia ligase adenylyltransferase LWM38_11925 PF02743 Cache domain LWM38_11925 PF00672 HAMP domain LWM38_11925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_11930 PF07885 Ion channel LWM38_11935 PF01928 CYTH domain LWM38_11940 PF01865 Protein of unknown function DUF47 LWM38_11945 PF01384 Phosphate transporter family LWM38_11950 PF08239 Bacterial SH3 domain LWM38_11960 PF13401 AAA domain LWM38_11960 PF01471 Putative peptidoglycan binding domain LWM38_11965 PF01966 HD domain LWM38_11965 PF01743 Poly A polymerase head domain LWM38_11965 PF12627 Probable RNA and SrmB- binding site of polymerase A LWM38_11970 PF02673 Bacitracin resistance protein BacA LWM38_11975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LWM38_11980 PF02152 Dihydroneopterin aldolase LWM38_11985 PF02660 Glycerol-3-phosphate acyltransferase LWM38_11990 PF12697 Alpha/beta hydrolase family LWM38_11995 PF00814 Glycoprotease family LWM38_12000 PF01165 Ribosomal protein S21 LWM38_12005 PF09424 Yqey-like protein LWM38_12010 PF01807 CHC2 zinc finger LWM38_12010 PF08278 DNA primase DnaG DnaB-binding LWM38_12010 PF08275 DNA primase catalytic core, N-terminal domain LWM38_12010 PF10410 DnaB-helicase binding domain of primase LWM38_12015 PF04539 Sigma-70 region 3 LWM38_12015 PF04545 Sigma-70, region 4 LWM38_12015 PF04546 Sigma-70, non-essential region LWM38_12015 PF03979 Sigma-70 factor, region 1.1 LWM38_12015 PF00140 Sigma-70 factor, region 1.2 LWM38_12015 PF04542 Sigma-70 region 2 LWM38_12040 PF00589 Phage integrase family LWM38_12085 PF01053 Cys/Met metabolism PLP-dependent enzyme LWM38_12090 PF01380 SIS domain LWM38_12095 PF00455 DeoR C terminal sensor domain LWM38_12095 PF08220 DeoR-like helix-turn-helix domain LWM38_12100 PF02887 Pyruvate kinase, alpha/beta domain LWM38_12100 PF00224 Pyruvate kinase, barrel domain LWM38_12105 PF10369 Small subunit of acetolactate synthase LWM38_12110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LWM38_12110 PF00205 Thiamine pyrophosphate enzyme, central domain LWM38_12110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LWM38_12115 PF00501 AMP-binding enzyme LWM38_12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_12120 PF03466 LysR substrate binding domain LWM38_12130 PF01569 PAP2 superfamily LWM38_12135 PF00873 AcrB/AcrD/AcrF family LWM38_12150 PF00682 HMGL-like LWM38_12150 PF08502 LeuA allosteric (dimerisation) domain LWM38_12155 PF00180 Isocitrate/isopropylmalate dehydrogenase LWM38_12160 PF00330 Aconitase family (aconitate hydratase) LWM38_12165 PF00694 Aconitase C-terminal domain LWM38_12180 PF05099 Tellurite resistance protein TerB LWM38_12180 PF00226 DnaJ domain LWM38_12185 PF04453 LPS transport system D LWM38_12185 PF03968 OstA-like protein LWM38_12190 PF00639 PPIC-type PPIASE domain LWM38_12190 PF09312 SurA N-terminal domain LWM38_12195 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LWM38_12200 PF00398 Ribosomal RNA adenine dimethylase LWM38_12205 PF04379 ApaG domain LWM38_12210 PF00149 Calcineurin-like phosphoesterase LWM38_12215 PF00186 Dihydrofolate reductase LWM38_12220 PF12821 Threonine/Serine exporter, ThrE LWM38_12225 PF06738 Putative threonine/serine exporter LWM38_12230 PF01018 GTP1/OBG LWM38_12230 PF01926 50S ribosome-binding GTPase LWM38_12235 PF01016 Ribosomal L27 protein LWM38_12240 PF00829 Ribosomal prokaryotic L21 protein LWM38_12245 PF00348 Polyprenyl synthetase LWM38_12255 PF00056 lactate/malate dehydrogenase, NAD binding domain LWM38_12255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LWM38_12260 PF01316 Arginine repressor, DNA binding domain LWM38_12260 PF02863 Arginine repressor, C-terminal domain LWM38_12275 PF00582 Universal stress protein family LWM38_12280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_12280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_12285 PF00849 RNA pseudouridylate synthase LWM38_12295 PF18339 RapA N-terminal Tudor like domain 1 LWM38_12295 PF12137 RNA polymerase recycling family C-terminal LWM38_12295 PF00271 Helicase conserved C-terminal domain LWM38_12295 PF18337 RapA N-terminal Tudor like domain LWM38_12295 PF00176 SNF2 family N-terminal domain LWM38_12300 PF13638 PIN domain LWM38_12300 PF02562 PhoH-like protein LWM38_12305 PF01523 Putative modulator of DNA gyrase LWM38_12310 PF00795 Carbon-nitrogen hydrolase LWM38_12320 PF10150 Ribonuclease E/G family LWM38_12320 PF00575 S1 RNA binding domain LWM38_12325 PF02545 Maf-like protein LWM38_12330 PF04093 rod shape-determining protein MreD LWM38_12335 PF04085 rod shape-determining protein MreC LWM38_12370 PF07963 Prokaryotic N-terminal methylation motif LWM38_12375 PF07963 Prokaryotic N-terminal methylation motif LWM38_12385 PF00482 Type II secretion system (T2SS), protein F LWM38_12390 PF00437 Type II/IV secretion system protein LWM38_12390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LWM38_12400 PF01471 Putative peptidoglycan binding domain LWM38_12400 PF13401 AAA domain LWM38_12405 PF03958 Bacterial type II/III secretion system short domain LWM38_12405 PF07660 Secretin and TonB N terminus short domain LWM38_12405 PF11741 AMIN domain LWM38_12405 PF00263 Bacterial type II and III secretion system protein LWM38_12425 PF00563 EAL domain LWM38_12425 PF17157 Gammaproteobacterial periplasmic sensor domain LWM38_12425 PF00990 Diguanylate cyclase, GGDEF domain LWM38_12430 PF00436 Single-strand binding protein family LWM38_12435 PF00196 Bacterial regulatory proteins, luxR family LWM38_12440 PF00483 Nucleotidyl transferase LWM38_12445 PF17755 UvrA DNA-binding domain LWM38_12445 PF00005 ABC transporter LWM38_12445 PF17760 UvrA interaction domain LWM38_12455 PF00266 Aminotransferase class-V LWM38_12460 PF00696 Amino acid kinase family LWM38_12460 PF01842 ACT domain LWM38_12465 PF02310 B12 binding domain LWM38_12465 PF02607 B12 binding domain LWM38_12465 PF02965 Vitamin B12 dependent methionine synthase, activation domain LWM38_12465 PF00809 Pterin binding enzyme LWM38_12465 PF02574 Homocysteine S-methyltransferase LWM38_12470 PF00999 Sodium/hydrogen exchanger family LWM38_12525 PF01507 Phosphoadenosine phosphosulfate reductase family LWM38_12530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LWM38_12530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LWM38_12535 PF00667 FAD binding domain LWM38_12535 PF00258 Flavodoxin LWM38_12535 PF00175 Oxidoreductase NAD-binding domain LWM38_12555 PF01207 Dihydrouridine synthase (Dus) LWM38_12575 PF02556 Preprotein translocase subunit SecB LWM38_12665 PF05840 Bacteriophage replication gene A protein (GPA) LWM38_12695 PF01475 Ferric uptake regulator family LWM38_12705 PF00342 Phosphoglucose isomerase LWM38_12710 PF01894 Uncharacterised protein family UPF0047 LWM38_12715 PF00842 Alanine racemase, C-terminal domain LWM38_12715 PF01168 Alanine racemase, N-terminal domain LWM38_12720 PF00772 DnaB-like helicase N terminal domain LWM38_12720 PF03796 DnaB-like helicase C terminal domain LWM38_12730 PF03948 Ribosomal protein L9, C-terminal domain LWM38_12730 PF01281 Ribosomal protein L9, N-terminal domain LWM38_12735 PF01084 Ribosomal protein S18 LWM38_12740 PF01250 Ribosomal protein S6 LWM38_12745 PF00588 SpoU rRNA Methylase family LWM38_12745 PF08032 RNA 2'-O ribose methyltransferase substrate binding LWM38_12750 PF00575 S1 RNA binding domain LWM38_12750 PF00773 RNB domain LWM38_12750 PF08206 Ribonuclease B OB domain LWM38_12750 PF17876 Cold shock domain LWM38_12750 PF08461 Ribonuclease R winged-helix domain LWM38_12755 PF01979 Amidohydrolase family LWM38_12760 PF08238 Sel1 repeat LWM38_12765 PF00709 Adenylosuccinate synthetase LWM38_12770 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LWM38_12775 PF01145 SPFH domain / Band 7 family LWM38_12780 PF01145 SPFH domain / Band 7 family LWM38_12780 PF12221 Bacterial membrane protein N terminal LWM38_12785 PF01926 50S ribosome-binding GTPase LWM38_12785 PF16360 GTP-binding GTPase Middle Region LWM38_12785 PF13167 GTP-binding GTPase N-terminal LWM38_12790 PF17209 Hfq protein LWM38_12800 PF08676 MutL C terminal dimerisation domain LWM38_12800 PF01119 DNA mismatch repair protein, C-terminal domain LWM38_12805 PF01520 N-acetylmuramoyl-L-alanine amidase LWM38_12810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LWM38_12815 PF08331 Domain of unknown function (DUF1730) LWM38_12895 PF00929 Exonuclease LWM38_12900 PF03193 RsgA GTPase LWM38_12905 PF02666 Phosphatidylserine decarboxylase LWM38_12910 PF03600 Citrate transporter LWM38_12910 PF02080 TrkA-C domain LWM38_12915 PF02743 Cache domain LWM38_12915 PF00672 HAMP domain LWM38_12915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_12925 PF00152 tRNA synthetases class II (D, K and N) LWM38_12930 PF02910 Fumarate reductase flavoprotein C-term LWM38_12930 PF00890 FAD binding domain LWM38_12935 PF13183 4Fe-4S dicluster domain LWM38_12935 PF13085 2Fe-2S iron-sulfur cluster binding domain LWM38_12940 PF02300 Fumarate reductase subunit C LWM38_12945 PF02313 Fumarate reductase subunit D LWM38_12950 PF01132 Elongation factor P (EF-P) OB domain LWM38_12950 PF08207 Elongation factor P (EF-P) KOW-like domain LWM38_12950 PF09285 Elongation factor P, C-terminal LWM38_12955 PF04055 Radical SAM superfamily LWM38_12965 PF14760 Rnk N-terminus LWM38_12965 PF01272 Transcription elongation factor, GreA/GreB, C-term LWM38_12975 PF03707 Bacterial signalling protein N terminal repeat LWM38_12975 PF00990 Diguanylate cyclase, GGDEF domain LWM38_12975 PF00563 EAL domain LWM38_12980 PF00072 Response regulator receiver domain LWM38_12980 PF00196 Bacterial regulatory proteins, luxR family LWM38_12985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_12985 PF01590 GAF domain LWM38_12985 PF08446 PAS fold LWM38_12985 PF00512 His Kinase A (phospho-acceptor) domain LWM38_12985 PF00360 Phytochrome region LWM38_12990 PF00990 Diguanylate cyclase, GGDEF domain LWM38_12990 PF08448 PAS fold LWM38_12995 PF13426 PAS domain LWM38_12995 PF08447 PAS fold LWM38_12995 PF05231 MASE1 LWM38_12995 PF00990 Diguanylate cyclase, GGDEF domain LWM38_12995 PF08448 PAS fold LWM38_12995 PF00563 EAL domain LWM38_13010 PF03061 Thioesterase superfamily LWM38_13020 PF08447 PAS fold LWM38_13020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_13020 PF13426 PAS domain LWM38_13025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LWM38_13025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LWM38_13030 PF00118 TCP-1/cpn60 chaperonin family LWM38_13035 PF00166 Chaperonin 10 Kd subunit LWM38_13040 PF01554 MatE LWM38_13045 PF01676 Metalloenzyme superfamily LWM38_13045 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LWM38_13050 PF00953 Glycosyl transferase family 4 LWM38_13055 PF00583 Acetyltransferase (GNAT) family LWM38_13055 PF00795 Carbon-nitrogen hydrolase LWM38_13065 PF01370 NAD dependent epimerase/dehydratase family LWM38_13070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LWM38_13070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LWM38_13075 PF00534 Glycosyl transferases group 1 LWM38_13080 PF13439 Glycosyltransferase Family 4 LWM38_13080 PF00534 Glycosyl transferases group 1 LWM38_13085 PF08323 Starch synthase catalytic domain LWM38_13085 PF00534 Glycosyl transferases group 1 LWM38_13095 PF01943 Polysaccharide biosynthesis protein LWM38_13105 PF01370 NAD dependent epimerase/dehydratase family LWM38_13110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LWM38_13110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LWM38_13110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LWM38_13140 PF07690 Major Facilitator Superfamily LWM38_13145 PF03009 Glycerophosphoryl diester phosphodiesterase family LWM38_13150 PF13614 AAA domain LWM38_13150 PF13807 G-rich domain on putative tyrosine kinase LWM38_13150 PF02706 Chain length determinant protein LWM38_13155 PF01451 Low molecular weight phosphotyrosine protein phosphatase LWM38_13160 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LWM38_13160 PF10531 SLBB domain LWM38_13160 PF02563 Polysaccharide biosynthesis/export protein LWM38_13180 PF02397 Bacterial sugar transferase LWM38_13195 PF00009 Elongation factor Tu GTP binding domain LWM38_13210 PF01507 Phosphoadenosine phosphosulfate reductase family LWM38_13215 PF02080 TrkA-C domain LWM38_13215 PF03600 Citrate transporter LWM38_13220 PF02397 Bacterial sugar transferase LWM38_13225 PF01370 NAD dependent epimerase/dehydratase family LWM38_13230 PF02719 Polysaccharide biosynthesis protein LWM38_13245 PF00535 Glycosyl transferase family 2 LWM38_13250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LWM38_13260 PF05523 WxcM-like, C-terminal LWM38_13275 PF00005 ABC transporter LWM38_13280 PF01061 ABC-2 type transporter LWM38_13285 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LWM38_13295 PF00535 Glycosyl transferase family 2 LWM38_13305 PF04321 RmlD substrate binding domain LWM38_13310 PF00483 Nucleotidyl transferase LWM38_13315 PF16363 GDP-mannose 4,6 dehydratase LWM38_13320 PF00581 Rhodanese-like domain LWM38_13325 PF02556 Preprotein translocase subunit SecB LWM38_13330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LWM38_13330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LWM38_13335 PF06426 Serine acetyltransferase, N-terminal LWM38_13335 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_13340 PF01551 Peptidase family M23 LWM38_13345 PF08360 QacR-like protein, C-terminal region LWM38_13345 PF00440 Bacterial regulatory proteins, tetR family LWM38_13350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LWM38_13350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LWM38_13350 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LWM38_13355 PF01370 NAD dependent epimerase/dehydratase family LWM38_13360 PF03279 Bacterial lipid A biosynthesis acyltransferase LWM38_13375 PF08666 SAF domain LWM38_13375 PF03102 NeuB family LWM38_13390 PF02348 Cytidylyltransferase LWM38_13395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LWM38_13400 PF02719 Polysaccharide biosynthesis protein LWM38_13405 PF00535 Glycosyl transferase family 2 LWM38_13420 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LWM38_13430 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LWM38_13435 PF01467 Cytidylyltransferase-like LWM38_13440 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LWM38_13440 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LWM38_13440 PF06827 Zinc finger found in FPG and IleRS LWM38_13450 PF00471 Ribosomal protein L33 LWM38_13455 PF00830 Ribosomal L28 family LWM38_13460 PF04002 RadC-like JAB domain LWM38_13465 PF04127 DNA / pantothenate metabolism flavoprotein LWM38_13465 PF02441 Flavoprotein LWM38_13470 PF00440 Bacterial regulatory proteins, tetR family LWM38_13475 PF03279 Bacterial lipid A biosynthesis acyltransferase LWM38_13480 PF00156 Phosphoribosyl transferase domain LWM38_13485 PF01138 3' exoribonuclease family, domain 1 LWM38_13485 PF03725 3' exoribonuclease family, domain 2 LWM38_13490 PF08340 Domain of unknown function (DUF1732) LWM38_13490 PF03755 YicC-like family, N-terminal region LWM38_13495 PF00313 'Cold-shock' DNA-binding domain LWM38_13505 PF00860 Permease family LWM38_13510 PF00625 Guanylate kinase LWM38_13515 PF01192 RNA polymerase Rpb6 LWM38_13520 PF13291 ACT domain LWM38_13520 PF04607 Region found in RelA / SpoT proteins LWM38_13520 PF02824 TGS domain LWM38_13525 PF00270 DEAD/DEAH box helicase LWM38_13525 PF00271 Helicase conserved C-terminal domain LWM38_13525 PF17191 RecG wedge domain LWM38_13530 PF00672 HAMP domain LWM38_13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_13530 PF00512 His Kinase A (phospho-acceptor) domain LWM38_13535 PF00486 Transcriptional regulatory protein, C terminal LWM38_13535 PF00072 Response regulator receiver domain LWM38_13540 PF01272 Transcription elongation factor, GreA/GreB, C-term LWM38_13540 PF03449 Transcription elongation factor, N-terminal LWM38_13550 PF02423 Ornithine cyclodeaminase/mu-crystallin family LWM38_13555 PF03553 Na+/H+ antiporter family LWM38_13565 PF09371 Tex-like protein N-terminal domain LWM38_13565 PF16921 Tex protein YqgF-like domain LWM38_13565 PF17674 HHH domain LWM38_13565 PF00575 S1 RNA binding domain LWM38_13575 PF00561 alpha/beta hydrolase fold LWM38_13580 PF00156 Phosphoribosyl transferase domain LWM38_13585 PF01521 Iron-sulphur cluster biosynthesis LWM38_13585 PF01106 NifU-like domain LWM38_13590 PF00293 NUDIX domain LWM38_13595 PF00459 Inositol monophosphatase family LWM38_13600 PF01203 Type II secretion system (T2SS), protein N LWM38_13605 PF04612 Type II secretion system (T2SS), protein M LWM38_13610 PF12693 GspL periplasmic domain LWM38_13610 PF05134 Type II secretion system (T2SS), protein L LWM38_13615 PF03934 Type II secretion system (T2SS), protein K LWM38_13620 PF07963 Prokaryotic N-terminal methylation motif LWM38_13620 PF11612 Type II secretion system (T2SS), protein J LWM38_13625 PF07963 Prokaryotic N-terminal methylation motif LWM38_13625 PF02501 Type II secretion system (T2SS), protein I LWM38_13630 PF12019 Type II transport protein GspH LWM38_13635 PF08334 Type II secretion system (T2SS), protein G LWM38_13635 PF07963 Prokaryotic N-terminal methylation motif LWM38_13640 PF00482 Type II secretion system (T2SS), protein F LWM38_13645 PF00437 Type II/IV secretion system protein LWM38_13650 PF00263 Bacterial type II and III secretion system protein LWM38_13650 PF03958 Bacterial type II/III secretion system short domain LWM38_13655 PF11356 Type II secretion system protein C LWM38_13660 PF01479 S4 domain LWM38_13665 PF01430 Hsp33 protein LWM38_13670 PF01293 Phosphoenolpyruvate carboxykinase LWM38_13680 PF09500 Putative thioesterase (yiiD_Cterm) LWM38_13680 PF00583 Acetyltransferase (GNAT) family LWM38_13685 PF02580 D-Tyr-tRNA(Tyr) deacylase LWM38_13690 PF03631 Virulence factor BrkB LWM38_13705 PF00679 Elongation factor G C-terminus LWM38_13705 PF00009 Elongation factor Tu GTP binding domain LWM38_13705 PF03144 Elongation factor Tu domain 2 LWM38_13710 PF00120 Glutamine synthetase, catalytic domain LWM38_13710 PF03951 Glutamine synthetase, beta-Grasp domain LWM38_13720 PF00512 His Kinase A (phospho-acceptor) domain LWM38_13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_13720 PF00989 PAS fold LWM38_13725 PF02954 Bacterial regulatory protein, Fis family LWM38_13725 PF00072 Response regulator receiver domain LWM38_13725 PF00158 Sigma-54 interaction domain LWM38_13730 PF03707 Bacterial signalling protein N terminal repeat LWM38_13730 PF00563 EAL domain LWM38_13730 PF00990 Diguanylate cyclase, GGDEF domain LWM38_13735 PF06969 HemN C-terminal domain LWM38_13735 PF04055 Radical SAM superfamily LWM38_13740 PF10675 Protein of unknown function (DUF2489) LWM38_13745 PF04220 Der GTPase activator (YihI) LWM38_13755 PF00034 Cytochrome c LWM38_13760 PF01926 50S ribosome-binding GTPase LWM38_13770 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LWM38_13770 PF01367 5'-3' exonuclease, C-terminal SAM fold LWM38_13770 PF01612 3'-5' exonuclease LWM38_13770 PF00476 DNA polymerase family A LWM38_13780 PF00490 Delta-aminolevulinic acid dehydratase LWM38_13785 PF01026 TatD related DNase LWM38_13790 PF00902 Sec-independent protein translocase protein (TatC) LWM38_13795 PF02416 mttA/Hcf106 family LWM38_13800 PF02416 mttA/Hcf106 family LWM38_13805 PF03109 ABC1 family LWM38_13810 PF02036 SCP-2 sterol transfer family LWM38_13815 PF01209 ubiE/COQ5 methyltransferase family LWM38_13820 PF02646 RmuC family LWM38_13835 PF10625 Universal stress protein B (UspB) LWM38_13840 PF00210 Ferritin-like domain LWM38_13845 PF00582 Universal stress protein family LWM38_13850 PF00892 EamA-like transporter family LWM38_13860 PF04445 Putative SAM-dependent methyltransferase LWM38_13865 PF00563 EAL domain LWM38_13865 PF08448 PAS fold LWM38_13865 PF00990 Diguanylate cyclase, GGDEF domain LWM38_13870 PF13404 AsnC-type helix-turn-helix domain LWM38_13870 PF01037 Lrp/AsnC ligand binding domain LWM38_13875 PF01432 Peptidase family M3 LWM38_13880 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LWM38_13885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LWM38_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_13895 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_13895 PF12911 N-terminal TM domain of oligopeptide transport permease C LWM38_13900 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_13905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_13910 PF00005 ABC transporter LWM38_13910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_13940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LWM38_13945 PF00580 UvrD/REP helicase N-terminal domain LWM38_13945 PF13361 UvrD-like helicase C-terminal domain LWM38_13950 PF00440 Bacterial regulatory proteins, tetR family LWM38_13955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_13960 PF00873 AcrB/AcrD/AcrF family LWM38_13965 PF04380 Membrane fusogenic activity LWM38_13970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LWM38_13970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LWM38_13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_13975 PF03466 LysR substrate binding domain LWM38_14020 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_14025 PF07369 Protein of unknown function (DUF1488) LWM38_14030 PF01488 Shikimate / quinate 5-dehydrogenase LWM38_14030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LWM38_14030 PF08501 Shikimate dehydrogenase substrate binding domain LWM38_14035 PF01218 Coproporphyrinogen III oxidase LWM38_14040 PF01300 Telomere recombination LWM38_14045 PF00731 AIR carboxylase LWM38_14050 PF02222 ATP-grasp domain LWM38_14050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LWM38_14055 PF01396 Topoisomerase DNA binding C4 zinc finger LWM38_14060 PF04361 Protein of unknown function (DUF494) LWM38_14065 PF17782 DprA winged helix domain LWM38_14065 PF02481 DNA recombination-mediator protein A LWM38_14075 PF01327 Polypeptide deformylase LWM38_14080 PF00551 Formyl transferase LWM38_14080 PF02911 Formyl transferase, C-terminal domain LWM38_14085 PF01189 16S rRNA methyltransferase RsmB/F LWM38_14085 PF01029 NusB family LWM38_14090 PF02080 TrkA-C domain LWM38_14090 PF02254 TrkA-N domain LWM38_14095 PF02386 Cation transport protein LWM38_14105 PF03006 Haemolysin-III related LWM38_14110 PF07070 SpoOM protein LWM38_14120 PF06288 Protein of unknown function (DUF1040) LWM38_14125 PF13746 4Fe-4S dicluster domain LWM38_14125 PF12801 4Fe-4S binding domain LWM38_14125 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LWM38_14130 PF01636 Phosphotransferase enzyme family LWM38_14135 PF01323 DSBA-like thioredoxin domain LWM38_14145 PF01078 Magnesium chelatase, subunit ChlI LWM38_14145 PF13335 Magnesium chelatase, subunit ChlI C-terminal LWM38_14150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LWM38_14150 PF00205 Thiamine pyrophosphate enzyme, central domain LWM38_14150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LWM38_14160 PF01063 Amino-transferase class IV LWM38_14165 PF00920 Dehydratase family LWM38_14170 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_14170 PF00585 C-terminal regulatory domain of Threonine dehydratase LWM38_14175 PF03466 LysR substrate binding domain LWM38_14175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14180 PF07690 Major Facilitator Superfamily LWM38_14185 PF00990 Diguanylate cyclase, GGDEF domain LWM38_14190 PF00132 Bacterial transferase hexapeptide (six repeats) LWM38_14190 PF14602 Hexapeptide repeat of succinyl-transferase LWM38_14190 PF12804 MobA-like NTP transferase domain LWM38_14195 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LWM38_14195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LWM38_14200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LWM38_14200 PF02874 ATP synthase alpha/beta family, beta-barrel domain LWM38_14205 PF00231 ATP synthase LWM38_14210 PF02874 ATP synthase alpha/beta family, beta-barrel domain LWM38_14210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LWM38_14210 PF00306 ATP synthase alpha/beta chain, C terminal domain LWM38_14215 PF00213 ATP synthase delta (OSCP) subunit LWM38_14220 PF00430 ATP synthase B/B' CF(0) LWM38_14225 PF00137 ATP synthase subunit C LWM38_14230 PF00119 ATP synthase A chain LWM38_14235 PF03899 ATP synthase I chain LWM38_14240 PF02195 ParB-like nuclease domain LWM38_14240 PF17762 HTH domain found in ParB protein LWM38_14245 PF13614 AAA domain LWM38_14250 PF02527 rRNA small subunit methyltransferase G LWM38_14255 PF13932 GidA associated domain LWM38_14255 PF01134 Glucose inhibited division protein A LWM38_14260 PF00258 Flavodoxin LWM38_14265 PF12631 MnmE helical domain LWM38_14265 PF10396 GTP-binding protein TrmE N-terminus LWM38_14265 PF01926 50S ribosome-binding GTPase LWM38_14270 PF02096 60Kd inner membrane protein LWM38_14270 PF14849 YidC periplasmic domain LWM38_14275 PF01809 Putative membrane protein insertion efficiency factor LWM38_14280 PF00825 Ribonuclease P LWM38_14285 PF00468 Ribosomal protein L34 LWM38_14290 PF00005 ABC transporter LWM38_14295 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_14300 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_14305 PF00294 pfkB family carbohydrate kinase LWM38_14310 PF08244 Glycosyl hydrolases family 32 C terminal LWM38_14310 PF00251 Glycosyl hydrolases family 32 N-terminal domain LWM38_14325 PF13443 Cro/C1-type HTH DNA-binding domain LWM38_14330 PF14497 Glutathione S-transferase, C-terminal domain LWM38_14330 PF02798 Glutathione S-transferase, N-terminal domain LWM38_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14335 PF03466 LysR substrate binding domain LWM38_14340 PF02954 Bacterial regulatory protein, Fis family LWM38_14340 PF00158 Sigma-54 interaction domain LWM38_14340 PF01590 GAF domain LWM38_14345 PF00171 Aldehyde dehydrogenase family LWM38_14350 PF13344 Haloacid dehalogenase-like hydrolase LWM38_14350 PF00293 NUDIX domain LWM38_14360 PF00756 Putative esterase LWM38_14365 PF00107 Zinc-binding dehydrogenase LWM38_14365 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_14370 PF00893 Small Multidrug Resistance protein LWM38_14385 PF00246 Zinc carboxypeptidase LWM38_14390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_14395 PF00990 Diguanylate cyclase, GGDEF domain LWM38_14400 PF00990 Diguanylate cyclase, GGDEF domain LWM38_14400 PF03707 Bacterial signalling protein N terminal repeat LWM38_14400 PF00563 EAL domain LWM38_14415 PF00672 HAMP domain LWM38_14415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_14415 PF12729 Four helix bundle sensory module for signal transduction LWM38_14420 PF00155 Aminotransferase class I and II LWM38_14420 PF00392 Bacterial regulatory proteins, gntR family LWM38_14425 PF00892 EamA-like transporter family LWM38_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14435 PF03466 LysR substrate binding domain LWM38_14440 PF00672 HAMP domain LWM38_14440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_14440 PF17200 Single Cache domain 2 LWM38_14450 PF03466 LysR substrate binding domain LWM38_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14460 PF13378 Enolase C-terminal domain-like LWM38_14460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LWM38_14465 PF02743 Cache domain LWM38_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_14465 PF00512 His Kinase A (phospho-acceptor) domain LWM38_14470 PF02954 Bacterial regulatory protein, Fis family LWM38_14470 PF00072 Response regulator receiver domain LWM38_14470 PF00158 Sigma-54 interaction domain LWM38_14485 PF00005 ABC transporter LWM38_14490 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_14495 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_14515 PF00483 Nucleotidyl transferase LWM38_14520 PF03922 OmpW family LWM38_14530 PF00501 AMP-binding enzyme LWM38_14535 PF00668 Condensation domain LWM38_14535 PF07993 Male sterility protein LWM38_14535 PF13193 AMP-binding enzyme C-terminal domain LWM38_14535 PF00501 AMP-binding enzyme LWM38_14535 PF00550 Phosphopantetheine attachment site LWM38_14545 PF00106 short chain dehydrogenase LWM38_14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14550 PF03466 LysR substrate binding domain LWM38_14560 PF13460 NAD(P)H-binding LWM38_14565 PF03466 LysR substrate binding domain LWM38_14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_14575 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LWM38_14595 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LWM38_14600 PF04013 Putative SAM-dependent RNA methyltransferase LWM38_14650 PF00884 Sulfatase LWM38_14660 PF01554 MatE LWM38_14665 PF00391 PEP-utilising enzyme, mobile domain LWM38_14665 PF02896 PEP-utilising enzyme, TIM barrel domain LWM38_14665 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LWM38_14670 PF03618 Kinase/pyrophosphorylase LWM38_14675 PF13417 Glutathione S-transferase, N-terminal domain LWM38_14675 PF04399 Glutaredoxin 2, C terminal domain LWM38_14685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LWM38_14700 PF03009 Glycerophosphoryl diester phosphodiesterase family LWM38_14705 PF00005 ABC transporter LWM38_14705 PF17912 MalK OB fold domain LWM38_14710 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_14715 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_14720 PF13416 Bacterial extracellular solute-binding protein LWM38_14740 PF18030 RimK PreATP-grasp domain LWM38_14740 PF08443 RimK-like ATP-grasp domain LWM38_14745 PF18030 RimK PreATP-grasp domain LWM38_14745 PF08443 RimK-like ATP-grasp domain LWM38_14770 PF00005 ABC transporter LWM38_14775 PF01497 Periplasmic binding protein LWM38_14780 PF01032 FecCD transport family LWM38_14785 PF04183 IucA / IucC family LWM38_14785 PF06276 Ferric iron reductase FhuF-like transporter LWM38_14795 PF06276 Ferric iron reductase FhuF-like transporter LWM38_14795 PF04183 IucA / IucC family LWM38_14800 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LWM38_14805 PF07715 TonB-dependent Receptor Plug Domain LWM38_14805 PF00593 TonB dependent receptor LWM38_14815 PF00849 RNA pseudouridylate synthase LWM38_14825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LWM38_14825 PF01872 RibD C-terminal domain LWM38_14875 PF13629 Pilus formation protein N terminal region LWM38_14875 PF04972 BON domain LWM38_14875 PF00263 Bacterial type II and III secretion system protein LWM38_14880 PF00437 Type II/IV secretion system protein LWM38_14920 PF00005 ABC transporter LWM38_14925 PF00392 Bacterial regulatory proteins, gntR family LWM38_14925 PF07729 FCD domain LWM38_14930 PF00563 EAL domain LWM38_14930 PF00990 Diguanylate cyclase, GGDEF domain LWM38_14930 PF03707 Bacterial signalling protein N terminal repeat LWM38_14940 PF01966 HD domain LWM38_14945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LWM38_14950 PF03611 PTS system sugar-specific permease component LWM38_14955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LWM38_14970 PF07670 Nucleoside recognition LWM38_14970 PF07662 Na+ dependent nucleoside transporter C-terminus LWM38_14970 PF01773 Na+ dependent nucleoside transporter N-terminus LWM38_14990 PF03707 Bacterial signalling protein N terminal repeat LWM38_14990 PF00563 EAL domain LWM38_14990 PF00990 Diguanylate cyclase, GGDEF domain LWM38_14995 PF00271 Helicase conserved C-terminal domain LWM38_14995 PF00270 DEAD/DEAH box helicase LWM38_15010 PF00990 Diguanylate cyclase, GGDEF domain LWM38_15015 PF00313 'Cold-shock' DNA-binding domain LWM38_15030 PF00392 Bacterial regulatory proteins, gntR family LWM38_15030 PF00155 Aminotransferase class I and II LWM38_15035 PF13520 Amino acid permease LWM38_15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15040 PF03466 LysR substrate binding domain LWM38_15045 PF01810 LysE type translocator LWM38_15060 PF03063 Prismane/CO dehydrogenase family LWM38_15065 PF00970 Oxidoreductase FAD-binding domain LWM38_15065 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_15065 PF00175 Oxidoreductase NAD-binding domain LWM38_15070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LWM38_15070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LWM38_15075 PF00672 HAMP domain LWM38_15075 PF00512 His Kinase A (phospho-acceptor) domain LWM38_15075 PF01627 Hpt domain LWM38_15075 PF00072 Response regulator receiver domain LWM38_15075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LWM38_15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_15080 PF04363 Protein of unknown function (DUF496) LWM38_15090 PF04337 Protein of unknown function, DUF480 LWM38_15095 PF01541 GIY-YIG catalytic domain LWM38_15100 PF13407 Periplasmic binding protein domain LWM38_15105 PF09308 LuxQ, periplasmic LWM38_15105 PF00512 His Kinase A (phospho-acceptor) domain LWM38_15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_15105 PF00072 Response regulator receiver domain LWM38_15125 PF00012 Hsp70 protein LWM38_15135 PF01557 Fumarylacetoacetate (FAA) hydrolase family LWM38_15140 PF01810 LysE type translocator LWM38_15145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LWM38_15145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LWM38_15145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LWM38_15145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LWM38_15150 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LWM38_15150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LWM38_15155 PF00115 Cytochrome C and Quinol oxidase polypeptide I LWM38_15160 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LWM38_15165 PF00510 Cytochrome c oxidase subunit III LWM38_15185 PF02628 Cytochrome oxidase assembly protein LWM38_15190 PF01040 UbiA prenyltransferase family LWM38_15200 PF12843 Putative quorum-sensing-regulated virulence factor LWM38_15205 PF00793 DAHP synthetase I family LWM38_15210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LWM38_15210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LWM38_15210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LWM38_15210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LWM38_15215 PF01050 Mannose-6-phosphate isomerase LWM38_15215 PF00483 Nucleotidyl transferase LWM38_15220 PF00924 Mechanosensitive ion channel LWM38_15225 PF02080 TrkA-C domain LWM38_15225 PF02254 TrkA-N domain LWM38_15230 PF02386 Cation transport protein LWM38_15235 PF01625 Peptide methionine sulfoxide reductase LWM38_15235 PF01641 SelR domain LWM38_15240 PF02566 OsmC-like protein LWM38_15245 PF00691 OmpA family LWM38_15245 PF13488 Glycine zipper LWM38_15250 PF13419 Haloacid dehalogenase-like hydrolase LWM38_15255 PF00202 Aminotransferase class-III LWM38_15260 PF00266 Aminotransferase class-V LWM38_15270 PF01266 FAD dependent oxidoreductase LWM38_15280 PF00005 ABC transporter LWM38_15285 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_15290 PF00392 Bacterial regulatory proteins, gntR family LWM38_15290 PF07702 UTRA domain LWM38_15300 PF03480 Bacterial extracellular solute-binding protein, family 7 LWM38_15310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LWM38_15315 PF01202 Shikimate kinase LWM38_15320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_15320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LWM38_15325 PF00356 Bacterial regulatory proteins, lacI family LWM38_15325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LWM38_15330 PF08021 Siderophore-interacting FAD-binding domain LWM38_15330 PF04954 Siderophore-interacting protein LWM38_15335 PF03313 Serine dehydratase alpha chain LWM38_15335 PF03315 Serine dehydratase beta chain LWM38_15360 PF00664 ABC transporter transmembrane region LWM38_15360 PF00005 ABC transporter LWM38_15365 PF00664 ABC transporter transmembrane region LWM38_15365 PF00005 ABC transporter LWM38_15385 PF01906 Putative heavy-metal-binding LWM38_15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15390 PF03466 LysR substrate binding domain LWM38_15400 PF01966 HD domain LWM38_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15430 PF03466 LysR substrate binding domain LWM38_15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15435 PF03466 LysR substrate binding domain LWM38_15440 PF00155 Aminotransferase class I and II LWM38_15445 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_15445 PF00107 Zinc-binding dehydrogenase LWM38_15455 PF00465 Iron-containing alcohol dehydrogenase LWM38_15465 PF13419 Haloacid dehalogenase-like hydrolase LWM38_15470 PF00892 EamA-like transporter family LWM38_15485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15485 PF03466 LysR substrate binding domain LWM38_15495 PF11230 Protein of unknown function (DUF3029) LWM38_15500 PF04055 Radical SAM superfamily LWM38_15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15505 PF03466 LysR substrate binding domain LWM38_15525 PF12805 FUSC-like inner membrane protein yccS LWM38_15530 PF12462 DNA helicase IV / RNA helicase N terminal LWM38_15530 PF13361 UvrD-like helicase C-terminal domain LWM38_15530 PF00580 UvrD/REP helicase N-terminal domain LWM38_15540 PF02142 MGS-like domain LWM38_15545 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LWM38_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_15550 PF00512 His Kinase A (phospho-acceptor) domain LWM38_15550 PF18415 Histidine kinase receptor ArcB trans-membrane domain LWM38_15550 PF01627 Hpt domain LWM38_15550 PF00989 PAS fold LWM38_15550 PF00072 Response regulator receiver domain LWM38_15570 PF01844 HNH endonuclease LWM38_15575 PF02798 Glutathione S-transferase, N-terminal domain LWM38_15590 PF00529 HlyD membrane-fusion protein of T1SS LWM38_15590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_15595 PF00873 AcrB/AcrD/AcrF family LWM38_15605 PF02378 Phosphotransferase system, EIIC LWM38_15605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LWM38_15610 PF00294 pfkB family carbohydrate kinase LWM38_15615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LWM38_15615 PF00381 PTS HPr component phosphorylation site LWM38_15620 PF00356 Bacterial regulatory proteins, lacI family LWM38_15620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LWM38_15625 PF00069 Protein kinase domain LWM38_15625 PF03793 PASTA domain LWM38_15630 PF07690 Major Facilitator Superfamily LWM38_15640 PF18267 Rubredoxin NAD+ reductase C-terminal domain LWM38_15640 PF04324 BFD-like [2Fe-2S] binding domain LWM38_15640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LWM38_15640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LWM38_15640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_15645 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_15645 PF00384 Molybdopterin oxidoreductase LWM38_15645 PF01568 Molydopterin dinucleotide binding domain LWM38_15750 PF00356 Bacterial regulatory proteins, lacI family LWM38_15755 PF00294 pfkB family carbohydrate kinase LWM38_15760 PF13407 Periplasmic binding protein domain LWM38_15765 PF02653 Branched-chain amino acid transport system / permease component LWM38_15770 PF00005 ABC transporter LWM38_15775 PF05025 RbsD / FucU transport protein family LWM38_15790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_15795 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_15800 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_15800 PF12911 N-terminal TM domain of oligopeptide transport permease C LWM38_15805 PF00005 ABC transporter LWM38_15805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_15815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15815 PF03466 LysR substrate binding domain LWM38_15825 PF00171 Aldehyde dehydrogenase family LWM38_15835 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_15850 PF00561 alpha/beta hydrolase fold LWM38_15865 PF02567 Phenazine biosynthesis-like protein LWM38_15875 PF13673 Acetyltransferase (GNAT) domain LWM38_15880 PF02469 Fasciclin domain LWM38_15885 PF00583 Acetyltransferase (GNAT) family LWM38_15890 PF00962 Adenosine/AMP deaminase LWM38_15895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LWM38_15900 PF00072 Response regulator receiver domain LWM38_15900 PF09308 LuxQ, periplasmic LWM38_15900 PF00512 His Kinase A (phospho-acceptor) domain LWM38_15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_15905 PF00034 Cytochrome c LWM38_15905 PF03150 Di-haem cytochrome c peroxidase LWM38_15910 PF00884 Sulfatase LWM38_15915 PF00884 Sulfatase LWM38_15925 PF17863 AAA lid domain LWM38_15925 PF07726 ATPase family associated with various cellular activities (AAA) LWM38_15940 PF13519 von Willebrand factor type A domain LWM38_15955 PF03466 LysR substrate binding domain LWM38_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_15960 PF00781 Diacylglycerol kinase catalytic domain LWM38_15965 PF03781 Sulfatase-modifying factor enzyme 1 LWM38_15970 PF13186 Iron-sulfur cluster-binding domain LWM38_15970 PF04055 Radical SAM superfamily LWM38_15980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LWM38_15980 PF00072 Response regulator receiver domain LWM38_15980 PF01627 Hpt domain LWM38_15980 PF00512 His Kinase A (phospho-acceptor) domain LWM38_15980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_15980 PF00672 HAMP domain LWM38_15990 PF00005 ABC transporter LWM38_15995 PF00664 ABC transporter transmembrane region LWM38_15995 PF00005 ABC transporter LWM38_16000 PF02321 Outer membrane efflux protein LWM38_16010 PF13533 Biotin-lipoyl like LWM38_16030 PF04542 Sigma-70 region 2 LWM38_16030 PF04545 Sigma-70, region 4 LWM38_16030 PF04539 Sigma-70 region 3 LWM38_16030 PF00140 Sigma-70 factor, region 1.2 LWM38_16045 PF07690 Major Facilitator Superfamily LWM38_16050 PF13533 Biotin-lipoyl like LWM38_16055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_16055 PF03466 LysR substrate binding domain LWM38_16075 PF00072 Response regulator receiver domain LWM38_16075 PF00486 Transcriptional regulatory protein, C terminal LWM38_16085 PF01161 Phosphatidylethanolamine-binding protein LWM38_16100 PF00291 Pyridoxal-phosphate dependent enzyme LWM38_16110 PF00579 tRNA synthetases class I (W and Y) LWM38_16120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_16120 PF02743 Cache domain LWM38_16120 PF00672 HAMP domain LWM38_16270 PF13673 Acetyltransferase (GNAT) domain LWM38_16280 PF01327 Polypeptide deformylase LWM38_16290 PF00313 'Cold-shock' DNA-binding domain LWM38_16305 PF00589 Phage integrase family LWM38_16340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_16420 PF08242 Methyltransferase domain LWM38_16430 PF02347 Glycine cleavage system P-protein LWM38_16435 PF01597 Glycine cleavage H-protein LWM38_16440 PF00464 Serine hydroxymethyltransferase LWM38_16450 PF01571 Aminomethyltransferase folate-binding domain LWM38_16450 PF08669 Glycine cleavage T-protein C-terminal barrel domain LWM38_16460 PF00472 RF-1 domain LWM38_16465 PF13419 Haloacid dehalogenase-like hydrolase LWM38_16470 PF17158 Membrane-associated sensor, integral membrane domain LWM38_16470 PF00990 Diguanylate cyclase, GGDEF domain LWM38_16475 PF01268 Formate--tetrahydrofolate ligase LWM38_16480 PF00294 pfkB family carbohydrate kinase LWM38_16550 PF00672 HAMP domain LWM38_16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_16555 PF03222 Tryptophan/tyrosine permease family LWM38_16560 PF04336 Acyl carrier protein phosphodiesterase LWM38_16565 PF00270 DEAD/DEAH box helicase LWM38_16565 PF00271 Helicase conserved C-terminal domain LWM38_16570 PF00202 Aminotransferase class-III LWM38_16575 PF00171 Aldehyde dehydrogenase family LWM38_16580 PF01037 Lrp/AsnC ligand binding domain LWM38_16585 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LWM38_16590 PF01321 Creatinase/Prolidase N-terminal domain LWM38_16590 PF00557 Metallopeptidase family M24 LWM38_16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_16600 PF00529 HlyD membrane-fusion protein of T1SS LWM38_16605 PF00529 HlyD membrane-fusion protein of T1SS LWM38_16605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_16610 PF00873 AcrB/AcrD/AcrF family LWM38_16625 PF01292 Prokaryotic cytochrome b561 LWM38_16630 PF04264 YceI-like domain LWM38_16635 PF01226 Formate/nitrite transporter LWM38_16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_16640 PF03466 LysR substrate binding domain LWM38_16645 PF06496 Protein of unknown function (DUF1097) LWM38_16650 PF11398 Protein of unknown function (DUF2813) LWM38_16655 PF00149 Calcineurin-like phosphoesterase LWM38_16655 PF02872 5'-nucleotidase, C-terminal domain LWM38_16660 PF03741 Integral membrane protein TerC family LWM38_16670 PF00270 DEAD/DEAH box helicase LWM38_16670 PF00271 Helicase conserved C-terminal domain LWM38_16680 PF00529 HlyD membrane-fusion protein of T1SS LWM38_16680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_16690 PF03466 LysR substrate binding domain LWM38_16700 PF12262 Bacterial virulence factor lipase N-terminal LWM38_16705 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LWM38_16715 PF01435 Peptidase family M48 LWM38_16720 PF03061 Thioesterase superfamily LWM38_16730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_16730 PF12793 Sugar transport-related sRNA regulator N-term LWM38_16735 PF00892 EamA-like transporter family LWM38_16755 PF00226 DnaJ domain LWM38_16755 PF01556 DnaJ C terminal domain LWM38_16755 PF00684 DnaJ central domain LWM38_16760 PF00905 Penicillin binding protein transpeptidase domain LWM38_16760 PF03717 Penicillin-binding Protein dimerisation domain LWM38_16770 PF00990 Diguanylate cyclase, GGDEF domain LWM38_16770 PF00563 EAL domain LWM38_16770 PF00498 FHA domain LWM38_16775 PF07055 Enoyl reductase FAD binding domain LWM38_16775 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LWM38_16775 PF12241 Trans-2-enoyl-CoA reductase catalytic region LWM38_16780 PF13472 GDSL-like Lipase/Acylhydrolase family LWM38_16785 PF00005 ABC transporter LWM38_16800 PF02626 Carboxyltransferase domain, subdomain A and B LWM38_16805 PF02682 Carboxyltransferase domain, subdomain C and D LWM38_16810 PF03746 LamB/YcsF family LWM38_16815 PF16363 GDP-mannose 4,6 dehydratase LWM38_16820 PF07715 TonB-dependent Receptor Plug Domain LWM38_16820 PF00593 TonB dependent receptor LWM38_16825 PF03466 LysR substrate binding domain LWM38_16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_16830 PF13607 Succinyl-CoA ligase like flavodoxin domain LWM38_16830 PF00583 Acetyltransferase (GNAT) family LWM38_16830 PF13380 CoA binding domain LWM38_16835 PF05036 Sporulation related domain LWM38_16840 PF01820 D-ala D-ala ligase N-terminus LWM38_16840 PF07478 D-ala D-ala ligase C-terminus LWM38_16855 PF01253 Translation initiation factor SUI1 LWM38_16870 PF03701 Uncharacterised protein family (UPF0181) LWM38_16885 PF00072 Response regulator receiver domain LWM38_16885 PF00486 Transcriptional regulatory protein, C terminal LWM38_16895 PF02233 NAD(P) transhydrogenase beta subunit LWM38_16900 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LWM38_16900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LWM38_16900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LWM38_16915 PF17158 Membrane-associated sensor, integral membrane domain LWM38_16915 PF00990 Diguanylate cyclase, GGDEF domain LWM38_16925 PF00360 Phytochrome region LWM38_16925 PF00990 Diguanylate cyclase, GGDEF domain LWM38_16925 PF01590 GAF domain LWM38_16925 PF00563 EAL domain LWM38_16935 PF00005 ABC transporter LWM38_16935 PF03459 TOBE domain LWM38_16940 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_16950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LWM38_16950 PF07685 CobB/CobQ-like glutamine amidotransferase domain LWM38_16965 PF12848 ABC transporter LWM38_16965 PF00005 ABC transporter LWM38_16970 PF08443 RimK-like ATP-grasp domain LWM38_16970 PF18030 RimK PreATP-grasp domain LWM38_16975 PF00155 Aminotransferase class I and II LWM38_16980 PF12833 Helix-turn-helix domain LWM38_16985 PF01554 MatE LWM38_16995 PF13597 Anaerobic ribonucleoside-triphosphate reductase LWM38_16995 PF03477 ATP cone domain LWM38_17010 PF04143 Sulphur transport LWM38_17025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LWM38_17025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LWM38_17030 PF00085 Thioredoxin LWM38_17035 PF05199 GMC oxidoreductase LWM38_17035 PF00732 GMC oxidoreductase LWM38_17045 PF07690 Major Facilitator Superfamily LWM38_17055 PF01554 MatE LWM38_17060 PF11756 Nitrous oxide-stimulated promoter LWM38_17080 PF00950 ABC 3 transport family LWM38_17085 PF00005 ABC transporter LWM38_17090 PF01297 Zinc-uptake complex component A periplasmic LWM38_17135 PF02472 Biopolymer transport protein ExbD/TolR LWM38_17140 PF01618 MotA/TolQ/ExbB proton channel family LWM38_17145 PF01618 MotA/TolQ/ExbB proton channel family LWM38_17155 PF07715 TonB-dependent Receptor Plug Domain LWM38_17155 PF00593 TonB dependent receptor LWM38_17160 PF00375 Sodium:dicarboxylate symporter family LWM38_17165 PF00512 His Kinase A (phospho-acceptor) domain LWM38_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_17165 PF00672 HAMP domain LWM38_17165 PF16527 Two-component sensor protein CpxA, periplasmic domain LWM38_17170 PF00486 Transcriptional regulatory protein, C terminal LWM38_17170 PF00072 Response regulator receiver domain LWM38_17185 PF14824 Sirohaem biosynthesis protein central LWM38_17185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LWM38_17185 PF10414 Sirohaem synthase dimerisation region LWM38_17190 PF01226 Formate/nitrite transporter LWM38_17195 PF13806 Rieske-like [2Fe-2S] domain LWM38_17200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_17200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LWM38_17200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LWM38_17200 PF04324 BFD-like [2Fe-2S] binding domain LWM38_17200 PF18267 Rubredoxin NAD+ reductase C-terminal domain LWM38_17215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_17215 PF00672 HAMP domain LWM38_17220 PF00842 Alanine racemase, C-terminal domain LWM38_17220 PF01168 Alanine racemase, N-terminal domain LWM38_17255 PF00672 HAMP domain LWM38_17255 PF02743 Cache domain LWM38_17255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_17280 PF05762 VWA domain containing CoxE-like protein LWM38_17285 PF07728 AAA domain (dynein-related subfamily) LWM38_17285 PF12592 Protein of unknown function (DUF3763) LWM38_17285 PF17868 AAA lid domain LWM38_17290 PF00293 NUDIX domain LWM38_17295 PF01212 Beta-eliminating lyase LWM38_17330 PF00196 Bacterial regulatory proteins, luxR family LWM38_17335 PF01926 50S ribosome-binding GTPase LWM38_17350 PF08448 PAS fold LWM38_17350 PF00990 Diguanylate cyclase, GGDEF domain LWM38_17355 PF03606 C4-dicarboxylate anaerobic carrier LWM38_17360 PF00196 Bacterial regulatory proteins, luxR family LWM38_17360 PF00072 Response regulator receiver domain LWM38_17365 PF00672 HAMP domain LWM38_17365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LWM38_17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_17365 PF07730 Histidine kinase LWM38_17380 PF00384 Molybdopterin oxidoreductase LWM38_17380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_17380 PF01568 Molydopterin dinucleotide binding domain LWM38_17385 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LWM38_17390 PF03264 NapC/NirT cytochrome c family, N-terminal region LWM38_17400 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LWM38_17410 PF02803 Thiolase, C-terminal domain LWM38_17410 PF00108 Thiolase, N-terminal domain LWM38_17415 PF00106 short chain dehydrogenase LWM38_17435 PF01037 Lrp/AsnC ligand binding domain LWM38_17460 PF01810 LysE type translocator LWM38_17465 PF00270 DEAD/DEAH box helicase LWM38_17465 PF00271 Helicase conserved C-terminal domain LWM38_17470 PF02492 CobW/HypB/UreG, nucleotide-binding domain LWM38_17470 PF07683 Cobalamin synthesis protein cobW C-terminal domain LWM38_17475 PF00654 Voltage gated chloride channel LWM38_17485 PF00175 Oxidoreductase NAD-binding domain LWM38_17485 PF00042 Globin LWM38_17485 PF00970 Oxidoreductase FAD-binding domain LWM38_17490 PF01590 GAF domain LWM38_17490 PF00158 Sigma-54 interaction domain LWM38_17500 PF00691 OmpA family LWM38_17500 PF04972 BON domain LWM38_17510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LWM38_17510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LWM38_17515 PF00440 Bacterial regulatory proteins, tetR family LWM38_17515 PF16925 Tetracyclin repressor-like, C-terminal domain LWM38_17520 PF16884 N-terminal domain of oxidoreductase LWM38_17520 PF00107 Zinc-binding dehydrogenase LWM38_17530 PF00849 RNA pseudouridylate synthase LWM38_17540 PF00768 D-alanyl-D-alanine carboxypeptidase LWM38_17540 PF07943 Penicillin-binding protein 5, C-terminal domain LWM38_17555 PF06483 Chitinase C LWM38_17555 PF00704 Glycosyl hydrolases family 18 LWM38_17560 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_17570 PF04224 Protein of unknown function, DUF417 LWM38_17585 PF13302 Acetyltransferase (GNAT) domain LWM38_17600 PF01042 Endoribonuclease L-PSP LWM38_17605 PF06719 AraC-type transcriptional regulator N-terminus LWM38_17605 PF12833 Helix-turn-helix domain LWM38_17610 PF00465 Iron-containing alcohol dehydrogenase LWM38_17615 PF00005 ABC transporter LWM38_17620 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_17625 PF00497 Bacterial extracellular solute-binding proteins, family 3 LWM38_17630 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_17640 PF03466 LysR substrate binding domain LWM38_17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_17645 PF01810 LysE type translocator LWM38_17655 PF08274 PhnA Zinc-Ribbon LWM38_17655 PF03831 PhnA domain LWM38_17690 PF00873 AcrB/AcrD/AcrF family LWM38_17695 PF00529 HlyD membrane-fusion protein of T1SS LWM38_17695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_17710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LWM38_17710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_17715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LWM38_17715 PF00378 Enoyl-CoA hydratase/isomerase LWM38_17715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LWM38_17720 PF01032 FecCD transport family LWM38_17730 PF07715 TonB-dependent Receptor Plug Domain LWM38_17730 PF00593 TonB dependent receptor LWM38_17735 PF12833 Helix-turn-helix domain LWM38_17740 PF07690 Major Facilitator Superfamily LWM38_17745 PF07995 Glucose / Sorbosone dehydrogenase LWM38_17750 PF00313 'Cold-shock' DNA-binding domain LWM38_17755 PF07152 YaeQ protein LWM38_17765 PF01227 GTP cyclohydrolase I LWM38_17770 PF00994 Probable molybdopterin binding domain LWM38_17770 PF03454 MoeA C-terminal region (domain IV) LWM38_17770 PF03453 MoeA N-terminal region (domain I and II) LWM38_17775 PF00899 ThiF family LWM38_17785 PF00581 Rhodanese-like domain LWM38_17790 PF01590 GAF domain LWM38_17790 PF00990 Diguanylate cyclase, GGDEF domain LWM38_17790 PF00360 Phytochrome region LWM38_17790 PF00563 EAL domain LWM38_17830 PF00437 Type II/IV secretion system protein LWM38_17845 PF13629 Pilus formation protein N terminal region LWM38_17845 PF00263 Bacterial type II and III secretion system protein LWM38_17845 PF04972 BON domain LWM38_17865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_17865 PF03466 LysR substrate binding domain LWM38_17880 PF00923 Transaldolase/Fructose-6-phosphate aldolase LWM38_17885 PF00456 Transketolase, thiamine diphosphate binding domain LWM38_17885 PF02780 Transketolase, C-terminal domain LWM38_17885 PF02779 Transketolase, pyrimidine binding domain LWM38_17890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_17890 PF08447 PAS fold LWM38_17895 PF01037 Lrp/AsnC ligand binding domain LWM38_17910 PF00801 PKD domain LWM38_17910 PF05547 Immune inhibitor A peptidase M6 LWM38_17915 PF07690 Major Facilitator Superfamily LWM38_17920 PF03466 LysR substrate binding domain LWM38_17920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_17925 PF00005 ABC transporter LWM38_17930 PF01032 FecCD transport family LWM38_17935 PF01032 FecCD transport family LWM38_17940 PF01497 Periplasmic binding protein LWM38_17960 PF03466 LysR substrate binding domain LWM38_17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_17965 PF02581 Thiamine monophosphate synthase LWM38_17970 PF02743 Cache domain LWM38_17970 PF00672 HAMP domain LWM38_17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_17975 PF02110 Hydroxyethylthiazole kinase family LWM38_17980 PF03070 TENA/THI-4/PQQC family LWM38_17985 PF09084 NMT1/THI5 like LWM38_17990 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_17995 PF00005 ABC transporter LWM38_18000 PF08543 Phosphomethylpyrimidine kinase LWM38_18005 PF00892 EamA-like transporter family LWM38_18030 PF00043 Glutathione S-transferase, C-terminal domain LWM38_18030 PF13417 Glutathione S-transferase, N-terminal domain LWM38_18050 PF00478 IMP dehydrogenase / GMP reductase domain LWM38_18070 PF01554 MatE LWM38_18075 PF03466 LysR substrate binding domain LWM38_18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_18080 PF00128 Alpha amylase, catalytic domain LWM38_18085 PF00892 EamA-like transporter family LWM38_18095 PF00664 ABC transporter transmembrane region LWM38_18095 PF00005 ABC transporter LWM38_18100 PF07715 TonB-dependent Receptor Plug Domain LWM38_18100 PF00593 TonB dependent receptor LWM38_18105 PF00005 ABC transporter LWM38_18110 PF01497 Periplasmic binding protein LWM38_18115 PF01032 FecCD transport family LWM38_18125 PF00330 Aconitase family (aconitate hydratase) LWM38_18125 PF00694 Aconitase C-terminal domain LWM38_18140 PF00490 Delta-aminolevulinic acid dehydratase LWM38_18160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_18170 PF01425 Amidase LWM38_18180 PF02899 Phage integrase, N-terminal SAM-like domain LWM38_18180 PF00589 Phage integrase family LWM38_18190 PF01638 HxlR-like helix-turn-helix LWM38_18200 PF00857 Isochorismatase family LWM38_18205 PF12833 Helix-turn-helix domain LWM38_18210 PF00563 EAL domain LWM38_18210 PF03707 Bacterial signalling protein N terminal repeat LWM38_18210 PF00990 Diguanylate cyclase, GGDEF domain LWM38_18220 PF02627 Carboxymuconolactone decarboxylase family LWM38_18225 PF12833 Helix-turn-helix domain LWM38_18235 PF00107 Zinc-binding dehydrogenase LWM38_18235 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_18245 PF03466 LysR substrate binding domain LWM38_18260 PF02311 AraC-like ligand binding domain LWM38_18260 PF12833 Helix-turn-helix domain LWM38_18270 PF11762 L-arabinose isomerase C-terminal domain LWM38_18270 PF02610 L-arabinose isomerase LWM38_18275 PF00596 Class II Aldolase and Adducin N-terminal domain LWM38_18280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LWM38_18280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LWM38_18285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LWM38_18290 PF00005 ABC transporter LWM38_18295 PF02653 Branched-chain amino acid transport system / permease component LWM38_18305 PF01081 KDPG and KHG aldolase LWM38_18310 PF03180 NLPA lipoprotein LWM38_18315 PF13443 Cro/C1-type HTH DNA-binding domain LWM38_18360 PF00691 OmpA family LWM38_18360 PF05736 OprF membrane domain LWM38_18430 PF00871 Acetokinase family LWM38_18435 PF00271 Helicase conserved C-terminal domain LWM38_18435 PF00270 DEAD/DEAH box helicase LWM38_18435 PF03880 DbpA RNA binding domain LWM38_18440 PF17876 Cold shock domain LWM38_18440 PF08206 Ribonuclease B OB domain LWM38_18440 PF00773 RNB domain LWM38_18440 PF00575 S1 RNA binding domain LWM38_18445 PF12833 Helix-turn-helix domain LWM38_18455 PF12849 PBP superfamily domain LWM38_18460 PF01575 MaoC like domain LWM38_18465 PF00873 AcrB/AcrD/AcrF family LWM38_18470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LWM38_18475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LWM38_18490 PF07687 Peptidase dimerisation domain LWM38_18490 PF01546 Peptidase family M20/M25/M40 LWM38_18500 PF00248 Aldo/keto reductase family LWM38_18505 PF00588 SpoU rRNA Methylase family LWM38_18505 PF08032 RNA 2'-O ribose methyltransferase substrate binding LWM38_18510 PF11953 Domain of unknown function (DUF3470) LWM38_18510 PF00037 4Fe-4S binding domain LWM38_18520 PF00270 DEAD/DEAH box helicase LWM38_18520 PF00271 Helicase conserved C-terminal domain LWM38_18530 PF11490 DNA polymerase III polC-type N-terminus II LWM38_18530 PF07733 Bacterial DNA polymerase III alpha NTPase domain LWM38_18530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LWM38_18530 PF14579 Helix-hairpin-helix motif LWM38_18530 PF02811 PHP domain LWM38_18530 PF00929 Exonuclease LWM38_18545 PF00271 Helicase conserved C-terminal domain LWM38_18545 PF00270 DEAD/DEAH box helicase LWM38_18545 PF03880 DbpA RNA binding domain LWM38_18550 PF00248 Aldo/keto reductase family LWM38_18570 PF02321 Outer membrane efflux protein LWM38_18580 PF00664 ABC transporter transmembrane region LWM38_18580 PF00005 ABC transporter LWM38_18580 PF03412 Peptidase C39 family LWM38_18590 PF00672 HAMP domain LWM38_18590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_18590 PF12729 Four helix bundle sensory module for signal transduction LWM38_18600 PF00924 Mechanosensitive ion channel LWM38_18600 PF05552 Conserved TM helix LWM38_18610 PF11412 Disulphide bond corrector protein DsbC LWM38_18610 PF02683 Cytochrome C biogenesis protein transmembrane region LWM38_18615 PF00085 Thioredoxin LWM38_18630 PF13609 Gram-negative porin LWM38_18635 PF00892 EamA-like transporter family LWM38_18640 PF00462 Glutaredoxin LWM38_18650 PF07690 Major Facilitator Superfamily LWM38_18655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_18655 PF03466 LysR substrate binding domain LWM38_18665 PF01551 Peptidase family M23 LWM38_18665 PF08525 Opacity-associated protein A N-terminal motif LWM38_18665 PF01476 LysM domain LWM38_18690 PF07670 Nucleoside recognition LWM38_18695 PF02743 Cache domain LWM38_18695 PF00672 HAMP domain LWM38_18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_18700 PF00128 Alpha amylase, catalytic domain LWM38_18705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LWM38_18715 PF01584 CheW-like domain LWM38_18715 PF00072 Response regulator receiver domain LWM38_18720 PF01923 Cobalamin adenosyltransferase LWM38_18725 PF01243 Pyridoxamine 5'-phosphate oxidase LWM38_18730 PF06228 Haem utilisation ChuX/HutX LWM38_18735 PF03544 Gram-negative bacterial TonB protein C-terminal LWM38_18740 PF01618 MotA/TolQ/ExbB proton channel family LWM38_18745 PF02472 Biopolymer transport protein ExbD/TolR LWM38_18755 PF01032 FecCD transport family LWM38_18760 PF00005 ABC transporter LWM38_18805 PF02540 NAD synthase LWM38_18810 PF03473 MOSC domain LWM38_18810 PF03476 MOSC N-terminal beta barrel domain LWM38_18810 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_18820 PF01979 Amidohydrolase family LWM38_18830 PF02028 BCCT, betaine/carnitine/choline family transporter LWM38_18845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LWM38_18845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LWM38_18850 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LWM38_18855 PF03480 Bacterial extracellular solute-binding protein, family 7 LWM38_18860 PF01266 FAD dependent oxidoreductase LWM38_18875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LWM38_18875 PF00205 Thiamine pyrophosphate enzyme, central domain LWM38_18875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LWM38_18880 PF07728 AAA domain (dynein-related subfamily) LWM38_18880 PF08406 CbbQ/NirQ/NorQ C-terminal LWM38_18880 PF12556 Cobaltochelatase CobS subunit N terminal LWM38_18885 PF11775 Cobalamin biosynthesis protein CobT VWA domain LWM38_18885 PF06213 Cobalamin biosynthesis protein CobT LWM38_18890 PF01925 Sulfite exporter TauE/SafE LWM38_18895 PF01515 Phosphate acetyl/butaryl transferase LWM38_18900 PF09339 IclR helix-turn-helix domain LWM38_18900 PF01614 Bacterial transcriptional regulator LWM38_18905 PF00171 Aldehyde dehydrogenase family LWM38_18910 PF01274 Malate synthase LWM38_18915 PF03466 LysR substrate binding domain LWM38_18915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_18920 PF00463 Isocitrate lyase family LWM38_18935 PF01752 Collagenase LWM38_18935 PF08453 Peptidase family M9 N-terminal LWM38_18935 PF04151 Bacterial pre-peptidase C-terminal domain LWM38_18940 PF17327 Acyl homoserine lactone synthase LWM38_18945 PF00072 Response regulator receiver domain LWM38_18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_18950 PF05231 MASE1 LWM38_18950 PF08447 PAS fold LWM38_18950 PF08448 PAS fold LWM38_18950 PF13426 PAS domain LWM38_18950 PF00563 EAL domain LWM38_18950 PF00990 Diguanylate cyclase, GGDEF domain LWM38_18980 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_18985 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_18985 PF14785 Maltose transport system permease protein MalF P2 domain LWM38_18990 PF01547 Bacterial extracellular solute-binding protein LWM38_18995 PF08402 TOBE domain LWM38_18995 PF00005 ABC transporter LWM38_19005 PF02743 Cache domain LWM38_19005 PF00672 HAMP domain LWM38_19005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_19010 PF07726 ATPase family associated with various cellular activities (AAA) LWM38_19010 PF17863 AAA lid domain LWM38_19015 PF01882 Protein of unknown function DUF58 LWM38_19025 PF00092 von Willebrand factor type A domain LWM38_19025 PF07584 Aerotolerance regulator N-terminal LWM38_19030 PF00092 von Willebrand factor type A domain LWM38_19030 PF07584 Aerotolerance regulator N-terminal LWM38_19040 PF00990 Diguanylate cyclase, GGDEF domain LWM38_19045 PF00005 ABC transporter LWM38_19050 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_19055 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_19060 PF12849 PBP superfamily domain LWM38_19065 PF00672 HAMP domain LWM38_19065 PF16591 Helical bimodular sensor domain LWM38_19065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LWM38_19080 PF01483 Proprotein convertase P-domain LWM38_19080 PF00082 Subtilase family LWM38_19085 PF00593 TonB dependent receptor LWM38_19085 PF07715 TonB-dependent Receptor Plug Domain LWM38_19090 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LWM38_19090 PF00326 Prolyl oligopeptidase family LWM38_19095 PF03280 Proteobacterial lipase chaperone protein LWM38_19100 PF00561 alpha/beta hydrolase fold LWM38_19105 PF00657 GDSL-like Lipase/Acylhydrolase LWM38_19110 PF00270 DEAD/DEAH box helicase LWM38_19110 PF00271 Helicase conserved C-terminal domain LWM38_19120 PF17969 L,D-transpeptidase C-terminal domain LWM38_19120 PF01476 LysM domain LWM38_19120 PF03734 L,D-transpeptidase catalytic domain LWM38_19125 PF01048 Phosphorylase superfamily LWM38_19140 PF00990 Diguanylate cyclase, GGDEF domain LWM38_19150 PF11742 Protein of unknown function (DUF3302) LWM38_19160 PF07155 ECF-type riboflavin transporter, S component LWM38_19165 PF00005 ABC transporter LWM38_19165 PF12558 ATP-binding cassette cobalt transporter LWM38_19180 PF00128 Alpha amylase, catalytic domain LWM38_19180 PF02806 Alpha amylase, C-terminal all-beta domain LWM38_19180 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LWM38_19185 PF02446 4-alpha-glucanotransferase LWM38_19190 PF00343 Carbohydrate phosphorylase LWM38_19195 PF17874 MalT-like TPR region LWM38_19195 PF00196 Bacterial regulatory proteins, luxR family LWM38_19210 PF02630 SCO1/SenC LWM38_19225 PF00375 Sodium:dicarboxylate symporter family LWM38_19235 PF00196 Bacterial regulatory proteins, luxR family LWM38_19235 PF00072 Response regulator receiver domain LWM38_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_19240 PF00512 His Kinase A (phospho-acceptor) domain LWM38_19245 PF13247 4Fe-4S dicluster domain LWM38_19250 PF03916 Polysulphide reductase, NrfD LWM38_19255 PF01568 Molydopterin dinucleotide binding domain LWM38_19255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LWM38_19255 PF00384 Molybdopterin oxidoreductase LWM38_19265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LWM38_19270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_19270 PF03466 LysR substrate binding domain LWM38_19275 PF01037 Lrp/AsnC ligand binding domain LWM38_19280 PF01810 LysE type translocator LWM38_19290 PF18494 Pullulanase Ins domain LWM38_19290 PF17967 Pullulanase N2 domain LWM38_19290 PF03714 Bacterial pullanase-associated domain LWM38_19290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LWM38_19290 PF11852 Domain of unknown function (DUF3372) LWM38_19295 PF00128 Alpha amylase, catalytic domain LWM38_19295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LWM38_19295 PF17999 Pullulanase N1-terminal domain LWM38_19300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_19300 PF03466 LysR substrate binding domain LWM38_19305 PF00128 Alpha amylase, catalytic domain LWM38_19305 PF16657 Maltogenic Amylase, C-terminal domain LWM38_19310 PF01547 Bacterial extracellular solute-binding protein LWM38_19335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LWM38_19335 PF00128 Alpha amylase, catalytic domain LWM38_19350 PF01553 Acyltransferase LWM38_19355 PF00970 Oxidoreductase FAD-binding domain LWM38_19355 PF00175 Oxidoreductase NAD-binding domain LWM38_19360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LWM38_19360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LWM38_19365 PF01734 Patatin-like phospholipase LWM38_19370 PF06628 Catalase-related immune-responsive LWM38_19370 PF00199 Catalase LWM38_19375 PF02595 Glycerate kinase family LWM38_19380 PF02447 GntP family permease LWM38_19385 PF01261 Xylose isomerase-like TIM barrel LWM38_19390 PF00596 Class II Aldolase and Adducin N-terminal domain LWM38_19395 PF17042 Nucleotide-binding C-terminal domain LWM38_19395 PF07005 Sugar-binding N-terminal domain LWM38_19400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_19400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LWM38_19405 PF00455 DeoR C terminal sensor domain LWM38_19405 PF08220 DeoR-like helix-turn-helix domain LWM38_19430 PF00440 Bacterial regulatory proteins, tetR family LWM38_19430 PF17932 Tetracyclin repressor-like, C-terminal domain LWM38_19445 PF01758 Sodium Bile acid symporter family LWM38_19450 PF03466 LysR substrate binding domain LWM38_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_19460 PF00230 Major intrinsic protein LWM38_19465 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LWM38_19465 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LWM38_19470 PF08220 DeoR-like helix-turn-helix domain LWM38_19470 PF00455 DeoR C terminal sensor domain LWM38_19475 PF01266 FAD dependent oxidoreductase LWM38_19475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LWM38_19495 PF01177 Asp/Glu/Hydantoin racemase LWM38_19505 PF00881 Nitroreductase family LWM38_19510 PF13091 PLD-like domain LWM38_19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_19515 PF03466 LysR substrate binding domain LWM38_19520 PF07690 Major Facilitator Superfamily LWM38_19525 PF14602 Hexapeptide repeat of succinyl-transferase LWM38_19525 PF12464 Maltose acetyltransferase LWM38_19530 PF00356 Bacterial regulatory proteins, lacI family LWM38_19535 PF00232 Glycosyl hydrolase family 1 LWM38_19540 PF02574 Homocysteine S-methyltransferase LWM38_19540 PF02310 B12 binding domain LWM38_19540 PF02965 Vitamin B12 dependent methionine synthase, activation domain LWM38_19540 PF02607 B12 binding domain LWM38_19540 PF00809 Pterin binding enzyme LWM38_19565 PF00698 Acyl transferase domain LWM38_19565 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_19565 PF16197 Ketoacyl-synthetase C-terminal extension LWM38_19565 PF00109 Beta-ketoacyl synthase, N-terminal domain LWM38_19565 PF02801 Beta-ketoacyl synthase, C-terminal domain LWM38_19565 PF08659 KR domain LWM38_19565 PF00550 Phosphopantetheine attachment site LWM38_19565 PF14765 Polyketide synthase dehydratase LWM38_19575 PF07690 Major Facilitator Superfamily LWM38_19580 PF02311 AraC-like ligand binding domain LWM38_19580 PF12833 Helix-turn-helix domain LWM38_19585 PF03466 LysR substrate binding domain LWM38_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_19590 PF00962 Adenosine/AMP deaminase LWM38_19595 PF14602 Hexapeptide repeat of succinyl-transferase LWM38_19595 PF12464 Maltose acetyltransferase LWM38_19600 PF01594 AI-2E family transporter LWM38_19625 PF00781 Diacylglycerol kinase catalytic domain LWM38_19625 PF02142 MGS-like domain LWM38_19640 PF04972 BON domain LWM38_19645 PF00158 Sigma-54 interaction domain LWM38_19645 PF02954 Bacterial regulatory protein, Fis family LWM38_19645 PF01590 GAF domain LWM38_19650 PF13840 ACT domain LWM38_19650 PF00696 Amino acid kinase family LWM38_19655 PF06339 Ectoine synthase LWM38_19660 PF00202 Aminotransferase class-III LWM38_19665 PF00583 Acetyltransferase (GNAT) family LWM38_19695 PF08240 Alcohol dehydrogenase GroES-like domain LWM38_19695 PF00107 Zinc-binding dehydrogenase LWM38_19700 PF02378 Phosphotransferase system, EIIC LWM38_19700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LWM38_19705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LWM38_19715 PF01047 MarR family LWM38_19720 PF00005 ABC transporter LWM38_19720 PF00571 CBS domain LWM38_19725 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_19730 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LWM38_19735 PF05199 GMC oxidoreductase LWM38_19735 PF00732 GMC oxidoreductase LWM38_19740 PF00171 Aldehyde dehydrogenase family LWM38_19745 PF13977 BetI-type transcriptional repressor, C-terminal LWM38_19745 PF00440 Bacterial regulatory proteins, tetR family LWM38_19750 PF00072 Response regulator receiver domain LWM38_19750 PF00486 Transcriptional regulatory protein, C terminal LWM38_19755 PF00512 His Kinase A (phospho-acceptor) domain LWM38_19755 PF00672 HAMP domain LWM38_19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_19765 PF04151 Bacterial pre-peptidase C-terminal domain LWM38_19765 PF02868 Thermolysin metallopeptidase, alpha-helical domain LWM38_19765 PF03413 Peptidase propeptide and YPEB domain LWM38_19765 PF07504 Fungalysin/Thermolysin Propeptide Motif LWM38_19765 PF01447 Thermolysin metallopeptidase, catalytic domain LWM38_19770 PF04389 Peptidase family M28 LWM38_19770 PF04151 Bacterial pre-peptidase C-terminal domain LWM38_19775 PF01266 FAD dependent oxidoreductase LWM38_19790 PF00158 Sigma-54 interaction domain LWM38_19790 PF00072 Response regulator receiver domain LWM38_19790 PF02954 Bacterial regulatory protein, Fis family LWM38_19795 PF00512 His Kinase A (phospho-acceptor) domain LWM38_19795 PF02743 Cache domain LWM38_19795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_19800 PF01263 Aldose 1-epimerase LWM38_19805 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain LWM38_19805 PF04616 Glycosyl hydrolases family 43 LWM38_19815 PF02838 Glycosyl hydrolase family 20, domain 2 LWM38_19815 PF00728 Glycosyl hydrolase family 20, catalytic domain LWM38_19820 PF01081 KDPG and KHG aldolase LWM38_19825 PF00294 pfkB family carbohydrate kinase LWM38_19830 PF00474 Sodium:solute symporter family LWM38_19840 PF07969 Amidohydrolase family LWM38_19850 PF02685 Glucokinase LWM38_19850 PF01418 Helix-turn-helix domain, rpiR family LWM38_19850 PF01380 SIS domain LWM38_19870 PF13533 Biotin-lipoyl like LWM38_19875 PF01047 MarR family LWM38_19890 PF01544 CorA-like Mg2+ transporter protein LWM38_19910 PF00005 ABC transporter LWM38_19910 PF00664 ABC transporter transmembrane region LWM38_19915 PF04286 Protein of unknown function (DUF445) LWM38_19920 PF01037 Lrp/AsnC ligand binding domain LWM38_19925 PF00474 Sodium:solute symporter family LWM38_19935 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LWM38_19935 PF14850 DNA-binding domain of Proline dehydrogenase LWM38_19935 PF01619 Proline dehydrogenase LWM38_19935 PF00171 Aldehyde dehydrogenase family LWM38_19940 PF12833 Helix-turn-helix domain LWM38_19955 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LWM38_19955 PF01243 Pyridoxamine 5'-phosphate oxidase LWM38_19960 PF00512 His Kinase A (phospho-acceptor) domain LWM38_19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_19960 PF02743 Cache domain LWM38_19965 PF02954 Bacterial regulatory protein, Fis family LWM38_19965 PF00072 Response regulator receiver domain LWM38_19965 PF00158 Sigma-54 interaction domain LWM38_19970 PF00529 HlyD membrane-fusion protein of T1SS LWM38_19985 PF00664 ABC transporter transmembrane region LWM38_19985 PF00005 ABC transporter LWM38_19985 PF03412 Peptidase C39 family LWM38_19995 PF13718 GNAT acetyltransferase 2 LWM38_19995 PF05127 Helicase LWM38_20005 PF18607 ParA helix turn helix domain LWM38_20005 PF13614 AAA domain LWM38_20020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_20020 PF00005 ABC transporter LWM38_20025 PF00005 ABC transporter LWM38_20025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_20035 PF00925 GTP cyclohydrolase II LWM38_20035 PF08719 Domain of unknown function (DUF1768) LWM38_20045 PF00512 His Kinase A (phospho-acceptor) domain LWM38_20045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LWM38_20045 PF00072 Response regulator receiver domain LWM38_20045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_20045 PF00672 HAMP domain LWM38_20045 PF01627 Hpt domain LWM38_20050 PF07702 UTRA domain LWM38_20050 PF00392 Bacterial regulatory proteins, gntR family LWM38_20075 PF00005 ABC transporter LWM38_20075 PF08402 TOBE domain LWM38_20085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LWM38_20090 PF04209 homogentisate 1,2-dioxygenase LWM38_20100 PF14497 Glutathione S-transferase, C-terminal domain LWM38_20100 PF02798 Glutathione S-transferase, N-terminal domain LWM38_20105 PF03741 Integral membrane protein TerC family LWM38_20115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_20115 PF03466 LysR substrate binding domain LWM38_20120 PF03476 MOSC N-terminal beta barrel domain LWM38_20120 PF03473 MOSC domain LWM38_20120 PF00111 2Fe-2S iron-sulfur cluster binding domain LWM38_20125 PF04794 YdjC-like protein LWM38_20130 PF03466 LysR substrate binding domain LWM38_20130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_20140 PF07690 Major Facilitator Superfamily LWM38_20145 PF13193 AMP-binding enzyme C-terminal domain LWM38_20145 PF00501 AMP-binding enzyme LWM38_20150 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LWM38_20155 PF01329 Pterin 4 alpha carbinolamine dehydratase LWM38_20165 PF01709 Transcriptional regulator LWM38_20175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_20175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LWM38_20190 PF00005 ABC transporter LWM38_20195 PF12704 MacB-like periplasmic core domain LWM38_20195 PF02687 FtsX-like permease family LWM38_20210 PF06580 Histidine kinase LWM38_20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LWM38_20210 PF07694 5TMR of 5TMR-LYT LWM38_20215 PF04397 LytTr DNA-binding domain LWM38_20215 PF00072 Response regulator receiver domain LWM38_20220 PF05193 Peptidase M16 inactive domain LWM38_20220 PF00675 Insulinase (Peptidase family M16) LWM38_20230 PF07549 SecD/SecF GG Motif LWM38_20230 PF13721 SecD export protein N-terminal TM region LWM38_20230 PF02355 Protein export membrane protein LWM38_20235 PF07549 SecD/SecF GG Motif LWM38_20235 PF02355 Protein export membrane protein LWM38_20245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LWM38_20250 PF07690 Major Facilitator Superfamily LWM38_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_20260 PF03466 LysR substrate binding domain LWM38_20280 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LWM38_20315 PF01593 Flavin containing amine oxidoreductase LWM38_20320 PF00106 short chain dehydrogenase LWM38_20330 PF03441 FAD binding domain of DNA photolyase LWM38_20330 PF00875 DNA photolyase LWM38_20340 PF12973 ChrR Cupin-like domain LWM38_20345 PF04545 Sigma-70, region 4 LWM38_20345 PF04542 Sigma-70 region 2 LWM38_20355 PF14552 Tautomerase enzyme LWM38_20360 PF10928 Protein of unknown function (DUF2810) LWM38_20365 PF03616 Sodium/glutamate symporter LWM38_20370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LWM38_20370 PF18113 Rubredoxin binding C-terminal domain LWM38_20375 PF00753 Metallo-beta-lactamase superfamily LWM38_20375 PF00301 Rubredoxin LWM38_20375 PF00258 Flavodoxin LWM38_20380 PF00881 Nitroreductase family LWM38_20390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LWM38_20390 PF02378 Phosphotransferase system, EIIC LWM38_20390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LWM38_20395 PF01232 Mannitol dehydrogenase Rossmann domain LWM38_20395 PF08125 Mannitol dehydrogenase C-terminal domain LWM38_20400 PF05068 Mannitol repressor LWM38_20405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LWM38_20415 PF03466 LysR substrate binding domain LWM38_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_20425 PF00730 HhH-GPD superfamily base excision DNA repair protein LWM38_20425 PF06029 AlkA N-terminal domain LWM38_20430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LWM38_20430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LWM38_20440 PF03600 Citrate transporter LWM38_20445 PF07670 Nucleoside recognition LWM38_20450 PF07670 Nucleoside recognition LWM38_20455 PF01124 MAPEG family LWM38_20485 PF12697 Alpha/beta hydrolase family LWM38_20490 PF00704 Glycosyl hydrolases family 18 LWM38_20490 PF08329 Chitinase A, N-terminal domain LWM38_20500 PF06865 Pyrimidine/purine nucleoside phosphorylase LWM38_20505 PF05726 Pirin C-terminal cupin domain LWM38_20505 PF02678 Pirin LWM38_20515 PF03707 Bacterial signalling protein N terminal repeat LWM38_20515 PF00990 Diguanylate cyclase, GGDEF domain LWM38_20515 PF00563 EAL domain LWM38_20535 PF00581 Rhodanese-like domain LWM38_20535 PF17773 UPF0176 acylphosphatase like domain LWM38_20550 PF00155 Aminotransferase class I and II LWM38_20555 PF12833 Helix-turn-helix domain LWM38_20555 PF01497 Periplasmic binding protein LWM38_20560 PF01554 MatE LWM38_20565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_20565 PF00005 ABC transporter LWM38_20570 PF09383 NIL domain LWM38_20570 PF00005 ABC transporter LWM38_20575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LWM38_20580 PF00528 Binding-protein-dependent transport system inner membrane component LWM38_20595 PF01070 FMN-dependent dehydrogenase LWM38_20600 PF02652 L-lactate permease LWM38_20605 PF03466 LysR substrate binding domain LWM38_20605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LWM38_20610 PF00326 Prolyl oligopeptidase family LWM38_20610 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LWM38_20620 PF00753 Metallo-beta-lactamase superfamily LWM38_20620 PF14863 Alkyl sulfatase dimerisation LWM38_20620 PF14864 Alkyl sulfatase C-terminal LWM38_20625 PF00005 ABC transporter LWM38_20625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LWM38_20635 PF13654 AAA domain LWM38_20635 PF05362 Lon protease (S16) C-terminal proteolytic domain LWM38_20640 PF07238 PilZ domain LWM38_20640 PF12945 Flagellar protein YcgR LWM38_20665 PF01047 MarR family LWM38_20670 PF07681 DoxX LWM38_20680 PF01274 Malate synthase LWM38_20685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LWM38_20685 PF00205 Thiamine pyrophosphate enzyme, central domain LWM38_20685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LWM38_20690 PF01261 Xylose isomerase-like TIM barrel LWM38_20695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LWM38_20695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LWM38_20700 PF13660 Domain of unknown function (DUF4147) LWM38_20700 PF05161 MOFRL family LWM38_20710 PF01979 Amidohydrolase family LWM38_20725 PF01979 Amidohydrolase family LWM38_20730 PF00860 Permease family LWM38_20735 PF00860 Permease family LWM38_20740 PF00576 HIUase/Transthyretin family LWM38_20750 PF09349 OHCU decarboxylase LWM38_20750 PF01014 Uricase LWM38_20755 PF03561 Allantoicase repeat LWM38_20760 PF04115 Ureidoglycolate lyase LWM38_20775 PF13411 MerR HTH family regulatory protein LWM38_20780 PF02627 Carboxymuconolactone decarboxylase family LWM38_20790 PF01979 Amidohydrolase family LWM38_20800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LWM38_20800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LWM38_20805 PF03450 CO dehydrogenase flavoprotein C-terminal domain LWM38_20805 PF00941 FAD binding domain in molybdopterin dehydrogenase LWM38_20820 PF01966 HD domain LWM38_20825 PF13419 Haloacid dehalogenase-like hydrolase LWM38_20830 PF03605 Anaerobic c4-dicarboxylate membrane transporter LWM38_20855 PF02264 LamB porin LWM38_20855 PF11471 Maltoporin periplasmic N-terminal extension LWM38_20860 PF00356 Bacterial regulatory proteins, lacI family LWM38_20865 PF00367 phosphotransferase system, EIIB LWM38_20865 PF02378 Phosphotransferase system, EIIC