locus-tag class description ECB94_00010 PF12848 ABC transporter ECB94_00010 PF00005 ABC transporter ECB94_00015 PF02634 FdhD/NarQ family ECB94_00035 PF02613 Nitrate reductase delta subunit ECB94_00045 PF01568 Molydopterin dinucleotide binding domain ECB94_00045 PF00384 Molybdopterin oxidoreductase ECB94_00045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_00050 PF13247 4Fe-4S dicluster domain ECB94_00065 PF00909 Ammonium Transporter Family ECB94_00070 PF02146 Sir2 family ECB94_00075 PF13416 Bacterial extracellular solute-binding protein ECB94_00080 PF13416 Bacterial extracellular solute-binding protein ECB94_00085 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_00090 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_00095 PF08402 TOBE domain ECB94_00095 PF00005 ABC transporter ECB94_00115 PF01171 PP-loop family ECB94_00120 PF00582 Universal stress protein family ECB94_00125 PF00027 Cyclic nucleotide-binding domain ECB94_00125 PF13545 Crp-like helix-turn-helix domain ECB94_00140 PF00403 Heavy-metal-associated domain ECB94_00150 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ECB94_00150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ECB94_00165 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECB94_00175 PF00664 ABC transporter transmembrane region ECB94_00175 PF00005 ABC transporter ECB94_00180 PF00664 ABC transporter transmembrane region ECB94_00180 PF00005 ABC transporter ECB94_00180 PF03412 Peptidase C39 family ECB94_00350 PF00145 C-5 cytosine-specific DNA methylase ECB94_00390 PF00145 C-5 cytosine-specific DNA methylase ECB94_00525 PF06303 MatP N-terminal domain ECB94_00525 PF17414 MatP C-terminal ribbon-helix-helix domain ECB94_00530 PF05362 Lon protease (S16) C-terminal proteolytic domain ECB94_00530 PF13654 AAA domain ECB94_00535 PF07977 FabA-like domain ECB94_00540 PF04957 Ribosome modulation factor ECB94_00550 PF00005 ABC transporter ECB94_00550 PF12848 ABC transporter ECB94_00550 PF16326 ABC transporter C-terminal domain ECB94_00560 PF02926 THUMP domain ECB94_00560 PF10672 S-adenosylmethionine-dependent methyltransferase ECB94_00560 PF01170 Putative RNA methylase family UPF0020 ECB94_00570 PF07126 Cell-division protein ZapC ECB94_00580 PF05088 Bacterial NAD-glutamate dehydrogenase ECB94_00590 PF11940 Domain of unknown function (DUF3458) Ig-like fold ECB94_00590 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ECB94_00590 PF01433 Peptidase family M1 domain ECB94_00600 PF11818 C-terminal domain of tail specific protease (DUF3340) ECB94_00600 PF00595 PDZ domain ECB94_00600 PF17804 Tail specific protease N-terminal domain ECB94_00600 PF03572 Peptidase family S41 ECB94_00605 PF04352 ProQ/FINO family ECB94_00605 PF17516 ProQ C-terminal domain ECB94_00610 PF13185 GAF domain ECB94_00615 PF00005 ABC transporter ECB94_00615 PF00664 ABC transporter transmembrane region ECB94_00620 PF04403 Paraquat-inducible protein A ECB94_00625 PF02470 MlaD protein ECB94_00635 PF13509 S1 domain ECB94_00635 PF17783 CvfB-like winged helix domain ECB94_00655 PF00793 DAHP synthetase I family ECB94_00665 PF10414 Sirohaem synthase dimerisation region ECB94_00665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ECB94_00665 PF14824 Sirohaem biosynthesis protein central ECB94_00670 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_00675 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_00680 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_00685 PF00005 ABC transporter ECB94_00690 PF01027 Inhibitor of apoptosis-promoting Bax1 ECB94_00695 PF04358 DsrC like protein ECB94_00700 PF00708 Acylphosphatase ECB94_00705 PF10672 S-adenosylmethionine-dependent methyltransferase ECB94_00705 PF17785 PUA-like domain ECB94_00715 PF00691 OmpA family ECB94_00715 PF05736 OprF membrane domain ECB94_00725 PF06508 Queuosine biosynthesis protein QueC ECB94_00730 PF04055 Radical SAM superfamily ECB94_00740 PF00781 Diacylglycerol kinase catalytic domain ECB94_00745 PF00480 ROK family ECB94_00760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_00760 PF00672 HAMP domain ECB94_00760 PF12729 Four helix bundle sensory module for signal transduction ECB94_00765 PF00877 NlpC/P60 family ECB94_00810 PF00583 Acetyltransferase (GNAT) family ECB94_00815 PF00472 RF-1 domain ECB94_00830 PF00924 Mechanosensitive ion channel ECB94_00830 PF05552 Conserved TM helix ECB94_00855 PF01734 Patatin-like phospholipase ECB94_00885 PF03918 Cytochrome C biogenesis protein ECB94_00890 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ECB94_00890 PF01578 Cytochrome C assembly protein ECB94_00895 PF03916 Polysulphide reductase, NrfD ECB94_00900 PF13247 4Fe-4S dicluster domain ECB94_00910 PF02335 Cytochrome c552 ECB94_00920 PF00175 Oxidoreductase NAD-binding domain ECB94_00920 PF00970 Oxidoreductase FAD-binding domain ECB94_00930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ECB94_00930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ECB94_00940 PF03618 Kinase/pyrophosphorylase ECB94_00945 PF00391 PEP-utilising enzyme, mobile domain ECB94_00945 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_00945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ECB94_00970 PF00216 Bacterial DNA-binding protein ECB94_00975 PF03483 B3/4 domain ECB94_00975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ECB94_00975 PF01588 Putative tRNA binding domain ECB94_00975 PF03147 Ferredoxin-fold anticodon binding domain ECB94_00975 PF03484 tRNA synthetase B5 domain ECB94_00980 PF01409 tRNA synthetases class II core domain (F) ECB94_00980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ECB94_00985 PF08241 Methyltransferase domain ECB94_01000 PF02525 Flavodoxin-like fold ECB94_01005 PF00999 Sodium/hydrogen exchanger family ECB94_01005 PF02254 TrkA-N domain ECB94_01010 PF01554 MatE ECB94_01020 PF05552 Conserved TM helix ECB94_01020 PF00924 Mechanosensitive ion channel ECB94_01025 PF07690 Major Facilitator Superfamily ECB94_01030 PF00990 Diguanylate cyclase, GGDEF domain ECB94_01040 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_01055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ECB94_01055 PF04324 BFD-like [2Fe-2S] binding domain ECB94_01055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_01055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ECB94_01055 PF18267 Rubredoxin NAD+ reductase C-terminal domain ECB94_01060 PF13806 Rieske-like [2Fe-2S] domain ECB94_01065 PF01226 Formate/nitrite transporter ECB94_01070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ECB94_01070 PF14824 Sirohaem biosynthesis protein central ECB94_01070 PF10414 Sirohaem synthase dimerisation region ECB94_01075 PF00691 OmpA family ECB94_01110 PF00437 Type II/IV secretion system protein ECB94_01125 PF13629 Pilus formation protein N terminal region ECB94_01125 PF00263 Bacterial type II and III secretion system protein ECB94_01125 PF04972 BON domain ECB94_01150 PF01464 Transglycosylase SLT domain ECB94_01150 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ECB94_01160 PF00691 OmpA family ECB94_01160 PF05736 OprF membrane domain ECB94_01195 PF00437 Type II/IV secretion system protein ECB94_01200 PF10609 NUBPL iron-transfer P-loop NTPase ECB94_01210 PF04972 BON domain ECB94_01210 PF00263 Bacterial type II and III secretion system protein ECB94_01210 PF13629 Pilus formation protein N terminal region ECB94_01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_01230 PF03466 LysR substrate binding domain ECB94_01235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ECB94_01235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ECB94_01240 PF04954 Siderophore-interacting protein ECB94_01240 PF08021 Siderophore-interacting FAD-binding domain ECB94_01250 PF01042 Endoribonuclease L-PSP ECB94_01255 PF03222 Tryptophan/tyrosine permease family ECB94_01260 PF01212 Beta-eliminating lyase ECB94_01280 PF00881 Nitroreductase family ECB94_01285 PF03466 LysR substrate binding domain ECB94_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_01290 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_01290 PF00107 Zinc-binding dehydrogenase ECB94_01305 PF04717 Type VI secretion system, phage-baseplate injector ECB94_01305 PF16671 Actin cross-linking domain ECB94_01360 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_01360 PF07724 AAA domain (Cdc48 subfamily) ECB94_01360 PF17871 AAA lid domain ECB94_01360 PF10431 C-terminal, D2-small domain, of ClpB protein ECB94_01405 PF00069 Protein kinase domain ECB94_01405 PF03793 PASTA domain ECB94_01425 PF01565 FAD binding domain ECB94_01425 PF13183 4Fe-4S dicluster domain ECB94_01425 PF02913 FAD linked oxidases, C-terminal domain ECB94_01465 PF00270 DEAD/DEAH box helicase ECB94_01465 PF00271 Helicase conserved C-terminal domain ECB94_01465 PF04408 Helicase associated domain (HA2) ECB94_01465 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ECB94_01470 PF00390 Malic enzyme, N-terminal domain ECB94_01470 PF03949 Malic enzyme, NAD binding domain ECB94_01480 PF02698 DUF218 domain ECB94_01490 PF00529 HlyD membrane-fusion protein of T1SS ECB94_01490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_01495 PF00005 ABC transporter ECB94_01495 PF00664 ABC transporter transmembrane region ECB94_01500 PF13416 Bacterial extracellular solute-binding protein ECB94_01505 PF00990 Diguanylate cyclase, GGDEF domain ECB94_01505 PF03707 Bacterial signalling protein N terminal repeat ECB94_01505 PF00563 EAL domain ECB94_01515 PF00266 Aminotransferase class-V ECB94_01525 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_01530 PF00664 ABC transporter transmembrane region ECB94_01530 PF00005 ABC transporter ECB94_01535 PF00005 ABC transporter ECB94_01535 PF00664 ABC transporter transmembrane region ECB94_01540 PF03471 Transporter associated domain ECB94_01540 PF00571 CBS domain ECB94_01540 PF01595 Cyclin M transmembrane N-terminal domain ECB94_01545 PF00266 Aminotransferase class-V ECB94_01555 PF00512 His Kinase A (phospho-acceptor) domain ECB94_01555 PF00072 Response regulator receiver domain ECB94_01555 PF13188 PAS domain ECB94_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_01555 PF08448 PAS fold ECB94_01570 PF04993 TfoX N-terminal domain ECB94_01570 PF04994 TfoX C-terminal domain ECB94_01580 PF03956 Lysine exporter LysO ECB94_01590 PF00282 Pyridoxal-dependent decarboxylase conserved domain ECB94_01595 PF01418 Helix-turn-helix domain, rpiR family ECB94_01595 PF01380 SIS domain ECB94_01600 PF00465 Iron-containing alcohol dehydrogenase ECB94_01600 PF00171 Aldehyde dehydrogenase family ECB94_01605 PF00462 Glutaredoxin ECB94_01610 PF02080 TrkA-C domain ECB94_01610 PF06826 Predicted Permease Membrane Region ECB94_01615 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ECB94_01615 PF07055 Enoyl reductase FAD binding domain ECB94_01615 PF12241 Trans-2-enoyl-CoA reductase catalytic region ECB94_01620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ECB94_01620 PF02770 Acyl-CoA dehydrogenase, middle domain ECB94_01620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ECB94_01620 PF09317 Domain of unknown function (DUF1974) ECB94_01625 PF00440 Bacterial regulatory proteins, tetR family ECB94_01630 PF06965 Na+/H+ antiporter 1 ECB94_01645 PF00005 ABC transporter ECB94_01650 PF13460 NAD(P)H-binding ECB94_01650 PF11066 Protein of unknown function (DUF2867) ECB94_01660 PF07690 Major Facilitator Superfamily ECB94_01665 PF00849 RNA pseudouridylate synthase ECB94_01665 PF01479 S4 domain ECB94_01670 PF04851 Type III restriction enzyme, res subunit ECB94_01670 PF00271 Helicase conserved C-terminal domain ECB94_01680 PF00486 Transcriptional regulatory protein, C terminal ECB94_01680 PF00072 Response regulator receiver domain ECB94_01685 PF00672 HAMP domain ECB94_01685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_01685 PF00512 His Kinase A (phospho-acceptor) domain ECB94_01690 PF01386 Ribosomal L25p family ECB94_01725 PF07726 ATPase family associated with various cellular activities (AAA) ECB94_01725 PF17863 AAA lid domain ECB94_01730 PF16385 Domain of unknown function ECB94_01730 PF00884 Sulfatase ECB94_01740 PF13186 Iron-sulfur cluster-binding domain ECB94_01740 PF04055 Radical SAM superfamily ECB94_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_01755 PF03466 LysR substrate binding domain ECB94_01775 PF03466 LysR substrate binding domain ECB94_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_01780 PF00072 Response regulator receiver domain ECB94_01780 PF00196 Bacterial regulatory proteins, luxR family ECB94_01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_01785 PF00512 His Kinase A (phospho-acceptor) domain ECB94_01790 PF13247 4Fe-4S dicluster domain ECB94_01795 PF03916 Polysulphide reductase, NrfD ECB94_01800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_01800 PF00384 Molybdopterin oxidoreductase ECB94_01800 PF01568 Molydopterin dinucleotide binding domain ECB94_01815 PF12833 Helix-turn-helix domain ECB94_01820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_01825 PF00923 Transaldolase/Fructose-6-phosphate aldolase ECB94_01830 PF04321 RmlD substrate binding domain ECB94_01835 PF04055 Radical SAM superfamily ECB94_01845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_01855 PF00381 PTS HPr component phosphorylation site ECB94_01855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_01855 PF05524 PEP-utilising enzyme, N-terminal ECB94_01855 PF00391 PEP-utilising enzyme, mobile domain ECB94_01855 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_01860 PF03928 Haem-degrading ECB94_01865 PF13419 Haloacid dehalogenase-like hydrolase ECB94_01870 PF00480 ROK family ECB94_01875 PF02653 Branched-chain amino acid transport system / permease component ECB94_01880 PF00005 ABC transporter ECB94_01885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ECB94_01890 PF17128 Domain of unknown function (DUF5107) ECB94_01890 PF13181 Tetratricopeptide repeat ECB94_01895 PF01263 Aldose 1-epimerase ECB94_01905 PF01938 TRAM domain ECB94_01905 PF04055 Radical SAM superfamily ECB94_01905 PF00919 Uncharacterized protein family UPF0004 ECB94_01910 PF02151 UvrB/uvrC motif ECB94_01910 PF17757 UvrB interaction domain ECB94_01910 PF00271 Helicase conserved C-terminal domain ECB94_01910 PF12344 Ultra-violet resistance protein B ECB94_01910 PF04851 Type III restriction enzyme, res subunit ECB94_01915 PF00005 ABC transporter ECB94_01915 PF00664 ABC transporter transmembrane region ECB94_01920 PF00664 ABC transporter transmembrane region ECB94_01920 PF00005 ABC transporter ECB94_01930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ECB94_01935 PF00005 ABC transporter ECB94_01935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_01940 PF00005 ABC transporter ECB94_01940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_01945 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_01945 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_01950 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_01955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_01965 PF02779 Transketolase, pyrimidine binding domain ECB94_01965 PF02780 Transketolase, C-terminal domain ECB94_01965 PF00456 Transketolase, thiamine diphosphate binding domain ECB94_01985 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_01985 PF00107 Zinc-binding dehydrogenase ECB94_01990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_01990 PF02378 Phosphotransferase system, EIIC ECB94_01995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_02005 PF01040 UbiA prenyltransferase family ECB94_02010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ECB94_02015 PF00510 Cytochrome c oxidase subunit III ECB94_02020 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECB94_02025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ECB94_02025 PF06481 COX Aromatic Rich Motif ECB94_02030 PF03466 LysR substrate binding domain ECB94_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02060 PF00550 Phosphopantetheine attachment site ECB94_02065 PF00550 Phosphopantetheine attachment site ECB94_02075 PF13193 AMP-binding enzyme C-terminal domain ECB94_02075 PF00501 AMP-binding enzyme ECB94_02090 PF00221 Aromatic amino acid lyase ECB94_02115 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_02115 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_02120 PF07977 FabA-like domain ECB94_02130 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_02130 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_02135 PF00753 Metallo-beta-lactamase superfamily ECB94_02135 PF14864 Alkyl sulfatase C-terminal ECB94_02135 PF14863 Alkyl sulfatase dimerisation ECB94_02140 PF03466 LysR substrate binding domain ECB94_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_02150 PF00873 AcrB/AcrD/AcrF family ECB94_02155 PF02321 Outer membrane efflux protein ECB94_02195 PF08212 Lipocalin-like domain ECB94_02200 PF00753 Metallo-beta-lactamase superfamily ECB94_02205 PF03009 Glycerophosphoryl diester phosphodiesterase family ECB94_02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02210 PF03466 LysR substrate binding domain ECB94_02220 PF01546 Peptidase family M20/M25/M40 ECB94_02220 PF07687 Peptidase dimerisation domain ECB94_02240 PF04204 Homoserine O-succinyltransferase ECB94_02250 PF01797 Transposase IS200 like ECB94_02255 PF13193 AMP-binding enzyme C-terminal domain ECB94_02255 PF00501 AMP-binding enzyme ECB94_02265 PF05971 RNA methyltransferase ECB94_02270 PF01863 Protein of unknown function DUF45 ECB94_02275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ECB94_02275 PF00925 GTP cyclohydrolase II ECB94_02285 PF03547 Membrane transport protein ECB94_02290 PF00121 Triosephosphate isomerase ECB94_02295 PF02734 DAK2 domain ECB94_02300 PF02733 Dak1 domain ECB94_02305 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ECB94_02310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_02320 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_02325 PF02502 Ribose/Galactose Isomerase ECB94_02330 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ECB94_02335 PF13936 Helix-turn-helix domain ECB94_02335 PF04198 Putative sugar-binding domain ECB94_02345 PF00768 D-alanyl-D-alanine carboxypeptidase ECB94_02345 PF07943 Penicillin-binding protein 5, C-terminal domain ECB94_02350 PF00375 Sodium:dicarboxylate symporter family ECB94_02355 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_02360 PF17152 Periplasmic sensor domain ECB94_02360 PF00990 Diguanylate cyclase, GGDEF domain ECB94_02370 PF13416 Bacterial extracellular solute-binding protein ECB94_02375 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_02380 PF00005 ABC transporter ECB94_02385 PF01066 CDP-alcohol phosphatidyltransferase ECB94_02390 PF01844 HNH endonuclease ECB94_02395 PF00248 Aldo/keto reductase family ECB94_02405 PF13533 Biotin-lipoyl like ECB94_02410 PF00873 AcrB/AcrD/AcrF family ECB94_02415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ECB94_02415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_02420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ECB94_02420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ECB94_02425 PF00356 Bacterial regulatory proteins, lacI family ECB94_02445 PF00474 Sodium:solute symporter family ECB94_02450 PF03313 Serine dehydratase alpha chain ECB94_02450 PF03315 Serine dehydratase beta chain ECB94_02465 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_02470 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_02475 PF00005 ABC transporter ECB94_02480 PF08402 TOBE domain ECB94_02480 PF00005 ABC transporter ECB94_02485 PF01590 GAF domain ECB94_02485 PF00158 Sigma-54 interaction domain ECB94_02485 PF02954 Bacterial regulatory protein, Fis family ECB94_02490 PF02525 Flavodoxin-like fold ECB94_02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02495 PF03466 LysR substrate binding domain ECB94_02505 PF05128 Domain of unknown function (DUF697) ECB94_02510 PF04317 YcjX-like family, DUF463 ECB94_02525 PF04715 Anthranilate synthase component I, N terminal region ECB94_02525 PF00425 chorismate binding enzyme ECB94_02530 PF00072 Response regulator receiver domain ECB94_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_02530 PF09308 LuxQ, periplasmic ECB94_02530 PF00512 His Kinase A (phospho-acceptor) domain ECB94_02545 PF00498 FHA domain ECB94_02545 PF00563 EAL domain ECB94_02545 PF00990 Diguanylate cyclase, GGDEF domain ECB94_02560 PF04542 Sigma-70 region 2 ECB94_02560 PF04539 Sigma-70 region 3 ECB94_02560 PF04545 Sigma-70, region 4 ECB94_02560 PF00140 Sigma-70 factor, region 1.2 ECB94_02570 PF00293 NUDIX domain ECB94_02575 PF03222 Tryptophan/tyrosine permease family ECB94_02580 PF03313 Serine dehydratase alpha chain ECB94_02580 PF03315 Serine dehydratase beta chain ECB94_02585 PF01242 6-pyruvoyl tetrahydropterin synthase ECB94_02595 PF00535 Glycosyl transferase family 2 ECB94_02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_02610 PF00152 tRNA synthetases class II (D, K and N) ECB94_02610 PF01336 OB-fold nucleic acid binding domain ECB94_02620 PF00155 Aminotransferase class I and II ECB94_02635 PF02743 Cache domain ECB94_02635 PF00672 HAMP domain ECB94_02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_02640 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_02645 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_02650 PF01047 MarR family ECB94_02655 PF00196 Bacterial regulatory proteins, luxR family ECB94_02655 PF00072 Response regulator receiver domain ECB94_02660 PF07730 Histidine kinase ECB94_02660 PF17200 Single Cache domain 2 ECB94_02665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_02675 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_02690 PF00753 Metallo-beta-lactamase superfamily ECB94_02695 PF05951 Bacterial protein of unknown function (DUF882) ECB94_02700 PF01471 Putative peptidoglycan binding domain ECB94_02700 PF03734 L,D-transpeptidase catalytic domain ECB94_02725 PF00925 GTP cyclohydrolase II ECB94_02735 PF00271 Helicase conserved C-terminal domain ECB94_02735 PF00270 DEAD/DEAH box helicase ECB94_02735 PF03880 DbpA RNA binding domain ECB94_02745 PF02613 Nitrate reductase delta subunit ECB94_02750 PF04976 DMSO reductase anchor subunit (DmsC) ECB94_02755 PF12800 4Fe-4S binding domain ECB94_02755 PF13247 4Fe-4S dicluster domain ECB94_02760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_02760 PF00384 Molybdopterin oxidoreductase ECB94_02760 PF01568 Molydopterin dinucleotide binding domain ECB94_02765 PF03466 LysR substrate binding domain ECB94_02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02780 PF18500 CadC C-terminal domain 1 ECB94_02780 PF00486 Transcriptional regulatory protein, C terminal ECB94_02790 PF03466 LysR substrate binding domain ECB94_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02805 PF02378 Phosphotransferase system, EIIC ECB94_02805 PF00367 phosphotransferase system, EIIB ECB94_02810 PF00251 Glycosyl hydrolases family 32 N-terminal domain ECB94_02810 PF08244 Glycosyl hydrolases family 32 C terminal ECB94_02815 PF00356 Bacterial regulatory proteins, lacI family ECB94_02825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECB94_02830 PF16653 Saccharopine dehydrogenase C-terminal domain ECB94_02830 PF03435 Saccharopine dehydrogenase NADP binding domain ECB94_02835 PF00202 Aminotransferase class-III ECB94_02840 PF00677 Lumazine binding domain ECB94_02865 PF01066 CDP-alcohol phosphatidyltransferase ECB94_02870 PF02151 UvrB/uvrC motif ECB94_02870 PF08459 UvrC Helix-hairpin-helix N-terminal ECB94_02870 PF01541 GIY-YIG catalytic domain ECB94_02875 PF00072 Response regulator receiver domain ECB94_02875 PF00196 Bacterial regulatory proteins, luxR family ECB94_02880 PF03104 DNA polymerase family B, exonuclease domain ECB94_02880 PF00136 DNA polymerase family B ECB94_02890 PF08207 Elongation factor P (EF-P) KOW-like domain ECB94_02890 PF01132 Elongation factor P (EF-P) OB domain ECB94_02890 PF09285 Elongation factor P, C-terminal ECB94_02895 PF04269 Protein of unknown function, DUF440 ECB94_02900 PF01569 PAP2 superfamily ECB94_02910 PF01368 DHH family ECB94_02910 PF02833 DHHA2 domain ECB94_02925 PF00384 Molybdopterin oxidoreductase ECB94_02925 PF01568 Molydopterin dinucleotide binding domain ECB94_02925 PF18364 Molybdopterin oxidoreductase N-terminal domain ECB94_02930 PF03264 NapC/NirT cytochrome c family, N-terminal region ECB94_02935 PF06796 Periplasmic nitrate reductase protein NapE ECB94_02940 PF03649 Uncharacterised protein family (UPF0014) ECB94_02945 PF01226 Formate/nitrite transporter ECB94_02965 PF03466 LysR substrate binding domain ECB94_02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_02975 PF00265 Thymidine kinase ECB94_02980 PF09190 DALR domain ECB94_02980 PF01406 tRNA synthetases class I (C) catalytic domain ECB94_02985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ECB94_02995 PF00563 EAL domain ECB94_02995 PF08668 HDOD domain ECB94_03000 PF02810 SEC-C motif ECB94_03015 PF08497 Radical SAM N-terminal ECB94_03015 PF04055 Radical SAM superfamily ECB94_03015 PF11842 Domain of unknown function (DUF3362) ECB94_03020 PF01740 STAS domain ECB94_03030 PF02563 Polysaccharide biosynthesis/export protein ECB94_03030 PF10531 SLBB domain ECB94_03040 PF00072 Response regulator receiver domain ECB94_03040 PF02954 Bacterial regulatory protein, Fis family ECB94_03040 PF00158 Sigma-54 interaction domain ECB94_03045 PF00534 Glycosyl transferases group 1 ECB94_03045 PF13439 Glycosyltransferase Family 4 ECB94_03075 PF13439 Glycosyltransferase Family 4 ECB94_03075 PF00534 Glycosyl transferases group 1 ECB94_03080 PF00535 Glycosyl transferase family 2 ECB94_03085 PF02397 Bacterial sugar transferase ECB94_03095 PF00892 EamA-like transporter family ECB94_03100 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ECB94_03105 PF01522 Polysaccharide deacetylase ECB94_03110 PF00551 Formyl transferase ECB94_03110 PF02911 Formyl transferase, C-terminal domain ECB94_03110 PF01370 NAD dependent epimerase/dehydratase family ECB94_03115 PF00535 Glycosyl transferase family 2 ECB94_03120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ECB94_03135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ECB94_03155 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ECB94_03160 PF13609 Gram-negative porin ECB94_03165 PF06733 DEAD_2 ECB94_03165 PF13307 Helicase C-terminal domain ECB94_03170 PF01925 Sulfite exporter TauE/SafE ECB94_03180 PF10689 Protein of unknown function (DUF2496) ECB94_03185 PF04310 MukB N-terminal ECB94_03185 PF16330 MukB hinge domain ECB94_03190 PF04288 MukE-like family ECB94_03205 PF02698 DUF218 domain ECB94_03210 PF00486 Transcriptional regulatory protein, C terminal ECB94_03210 PF00072 Response regulator receiver domain ECB94_03215 PF02613 Nitrate reductase delta subunit ECB94_03220 PF00356 Bacterial regulatory proteins, lacI family ECB94_03225 PF04994 TfoX C-terminal domain ECB94_03225 PF04993 TfoX N-terminal domain ECB94_03245 PF08323 Starch synthase catalytic domain ECB94_03245 PF00534 Glycosyl transferases group 1 ECB94_03250 PF00483 Nucleotidyl transferase ECB94_03255 PF01396 Topoisomerase DNA binding C4 zinc finger ECB94_03255 PF01131 DNA topoisomerase ECB94_03255 PF08272 Topoisomerase I zinc-ribbon-like ECB94_03255 PF01751 Toprim domain ECB94_03260 PF10692 Protein of unknown function (DUF2498) ECB94_03265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ECB94_03270 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ECB94_03275 PF04376 Arginine-tRNA-protein transferase, N terminus ECB94_03275 PF04377 Arginine-tRNA-protein transferase, C terminus ECB94_03280 PF01176 Translation initiation factor 1A / IF-1 ECB94_03285 PF10431 C-terminal, D2-small domain, of ClpB protein ECB94_03285 PF02861 Clp amino terminal domain, pathogenicity island component ECB94_03285 PF17871 AAA lid domain ECB94_03285 PF07724 AAA domain (Cdc48 subfamily) ECB94_03285 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_03290 PF02617 ATP-dependent Clp protease adaptor protein ClpS ECB94_03295 PF00313 'Cold-shock' DNA-binding domain ECB94_03300 PF03971 Monomeric isocitrate dehydrogenase ECB94_03305 PF00849 RNA pseudouridylate synthase ECB94_03310 PF02348 Cytidylyltransferase ECB94_03315 PF03966 Trm112p-like protein ECB94_03320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ECB94_03325 PF00005 ABC transporter ECB94_03325 PF00664 ABC transporter transmembrane region ECB94_03330 PF00753 Metallo-beta-lactamase superfamily ECB94_03330 PF13567 Domain of unknown function (DUF4131) ECB94_03330 PF03772 Competence protein ECB94_03340 PF12704 MacB-like periplasmic core domain ECB94_03340 PF02687 FtsX-like permease family ECB94_03345 PF00005 ABC transporter ECB94_03350 PF02687 FtsX-like permease family ECB94_03350 PF12704 MacB-like periplasmic core domain ECB94_03360 PF02559 CarD-like/TRCF domain ECB94_03360 PF00271 Helicase conserved C-terminal domain ECB94_03360 PF00270 DEAD/DEAH box helicase ECB94_03360 PF03461 TRCF domain ECB94_03360 PF17757 UvrB interaction domain ECB94_03375 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_03380 PF02368 Bacterial Ig-like domain (group 2) ECB94_03380 PF11999 Protein of unknown function (DUF3494) ECB94_03385 PF00691 OmpA family ECB94_03385 PF01389 OmpA-like transmembrane domain ECB94_03390 PF05728 Uncharacterised protein family (UPF0227) ECB94_03400 PF13036 Peptidoglycan-synthase activator LpoB ECB94_03400 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ECB94_03405 PF07233 Protein of unknown function (DUF1425) ECB94_03415 PF01230 HIT domain ECB94_03420 PF00672 HAMP domain ECB94_03420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_03435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_03435 PF03466 LysR substrate binding domain ECB94_03440 PF00171 Aldehyde dehydrogenase family ECB94_03445 PF00871 Acetokinase family ECB94_03450 PF01515 Phosphate acetyl/butaryl transferase ECB94_03455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECB94_03455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECB94_03465 PF01048 Phosphorylase superfamily ECB94_03470 PF00403 Heavy-metal-associated domain ECB94_03475 PF01554 MatE ECB94_03490 PF03793 PASTA domain ECB94_03490 PF00069 Protein kinase domain ECB94_03495 PF07690 Major Facilitator Superfamily ECB94_03505 PF04324 BFD-like [2Fe-2S] binding domain ECB94_03505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ECB94_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_03505 PF18267 Rubredoxin NAD+ reductase C-terminal domain ECB94_03505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ECB94_03510 PF10414 Sirohaem synthase dimerisation region ECB94_03510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ECB94_03515 PF01568 Molydopterin dinucleotide binding domain ECB94_03515 PF00384 Molybdopterin oxidoreductase ECB94_03515 PF04324 BFD-like [2Fe-2S] binding domain ECB94_03515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_03520 PF02080 TrkA-C domain ECB94_03520 PF02254 TrkA-N domain ECB94_03525 PF02386 Cation transport protein ECB94_03530 PF00591 Glycosyl transferase family, a/b domain ECB94_03530 PF02885 Glycosyl transferase family, helical bundle domain ECB94_03545 PF02391 MoaE protein ECB94_03550 PF02597 ThiS family ECB94_03555 PF01967 MoaC family ECB94_03560 PF00994 Probable molybdopterin binding domain ECB94_03565 PF06463 Molybdenum Cofactor Synthesis C ECB94_03565 PF04055 Radical SAM superfamily ECB94_03570 PF01933 Uncharacterised protein family UPF0052 ECB94_03575 PF01627 Hpt domain ECB94_03580 PF00158 Sigma-54 interaction domain ECB94_03580 PF02954 Bacterial regulatory protein, Fis family ECB94_03580 PF00072 Response regulator receiver domain ECB94_03585 PF02151 UvrB/uvrC motif ECB94_03585 PF00271 Helicase conserved C-terminal domain ECB94_03585 PF17757 UvrB interaction domain ECB94_03585 PF12344 Ultra-violet resistance protein B ECB94_03585 PF04851 Type III restriction enzyme, res subunit ECB94_03595 PF02508 Rnf-Nqr subunit, membrane protein ECB94_03600 PF04060 Putative Fe-S cluster ECB94_03605 PF13375 RnfC Barrel sandwich hybrid domain ECB94_03605 PF12838 4Fe-4S dicluster domain ECB94_03605 PF10531 SLBB domain ECB94_03605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ECB94_03610 PF03116 NQR2, RnfD, RnfE family ECB94_03620 PF02508 Rnf-Nqr subunit, membrane protein ECB94_03625 PF10576 Iron-sulfur binding domain of endonuclease III ECB94_03625 PF00730 HhH-GPD superfamily base excision DNA repair protein ECB94_03625 PF00633 Helix-hairpin-helix motif ECB94_03630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_03635 PF18393 MotY N-terminal domain ECB94_03635 PF00691 OmpA family ECB94_03640 PF00929 Exonuclease ECB94_03645 PF13726 Na+-H+ antiporter family ECB94_03645 PF03553 Na+/H+ antiporter family ECB94_03650 PF00462 Glutaredoxin ECB94_03655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ECB94_03655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ECB94_03670 PF00171 Aldehyde dehydrogenase family ECB94_03670 PF00465 Iron-containing alcohol dehydrogenase ECB94_03675 PF01914 MarC family integral membrane protein ECB94_03680 PF00520 Ion transport protein ECB94_03680 PF00027 Cyclic nucleotide-binding domain ECB94_03685 PF02774 Semialdehyde dehydrogenase, dimerisation domain ECB94_03685 PF01118 Semialdehyde dehydrogenase, NAD binding domain ECB94_03700 PF04245 37-kD nucleoid-associated bacterial protein ECB94_03705 PF07208 Protein of unknown function (DUF1414) ECB94_03710 PF11893 Domain of unknown function (DUF3413) ECB94_03710 PF00884 Sulfatase ECB94_03735 PF00929 Exonuclease ECB94_03750 PF12961 Domain of unknown function (DUF3850) ECB94_03790 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_03790 PF00589 Phage integrase family ECB94_03970 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_03970 PF00589 Phage integrase family ECB94_03990 PF00293 NUDIX domain ECB94_03995 PF00850 Histone deacetylase domain ECB94_04000 PF00106 short chain dehydrogenase ECB94_04005 PF01751 Toprim domain ECB94_04005 PF01131 DNA topoisomerase ECB94_04010 PF00881 Nitroreductase family ECB94_04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_04015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ECB94_04020 PF01343 Peptidase family S49 ECB94_04025 PF17763 Glutaminase/Asparaginase C-terminal domain ECB94_04025 PF00710 Asparaginase, N-terminal ECB94_04030 PF01451 Low molecular weight phosphotyrosine protein phosphatase ECB94_04065 PF02796 Helix-turn-helix domain of resolvase ECB94_04065 PF00239 Resolvase, N terminal domain ECB94_04075 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain ECB94_04075 PF00589 Phage integrase family ECB94_04105 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ECB94_04105 PF12557 Cob(I)alamin adenosyltransferase N terminal ECB94_04110 PF01773 Na+ dependent nucleoside transporter N-terminus ECB94_04110 PF07662 Na+ dependent nucleoside transporter C-terminus ECB94_04110 PF07670 Nucleoside recognition ECB94_04120 PF05170 AsmA family ECB94_04125 PF00485 Phosphoribulokinase / Uridine kinase family ECB94_04130 PF10609 NUBPL iron-transfer P-loop NTPase ECB94_04135 PF01588 Putative tRNA binding domain ECB94_04135 PF09334 tRNA synthetases class I (M) ECB94_04145 PF00392 Bacterial regulatory proteins, gntR family ECB94_04145 PF07840 FadR C-terminal domain ECB94_04150 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ECB94_04155 PF02600 Disulfide bond formation protein DsbB ECB94_04160 PF02810 SEC-C motif ECB94_04160 PF07516 SecA Wing and Scaffold domain ECB94_04160 PF07517 SecA DEAD-like domain ECB94_04160 PF01043 SecA preprotein cross-linking domain ECB94_04165 PF01207 Dihydrouridine synthase (Dus) ECB94_04170 PF02903 Alpha amylase, N-terminal ig-like domain ECB94_04170 PF00128 Alpha amylase, catalytic domain ECB94_04175 PF00005 ABC transporter ECB94_04180 PF02653 Branched-chain amino acid transport system / permease component ECB94_04190 PF07995 Glucose / Sorbosone dehydrogenase ECB94_04200 PF00871 Acetokinase family ECB94_04205 PF01515 Phosphate acetyl/butaryl transferase ECB94_04205 PF07085 DRTGG domain ECB94_04210 PF13409 Glutathione S-transferase, N-terminal domain ECB94_04215 PF00005 ABC transporter ECB94_04215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_04220 PF00005 ABC transporter ECB94_04220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_04225 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_04225 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_04230 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_04235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_04240 PF00196 Bacterial regulatory proteins, luxR family ECB94_04240 PF00072 Response regulator receiver domain ECB94_04245 PF13193 AMP-binding enzyme C-terminal domain ECB94_04245 PF00501 AMP-binding enzyme ECB94_04255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ECB94_04260 PF12833 Helix-turn-helix domain ECB94_04265 PF00593 TonB dependent receptor ECB94_04265 PF07715 TonB-dependent Receptor Plug Domain ECB94_04275 PF08891 YfcL protein ECB94_04280 PF04315 Elongation factor P hydroxylase ECB94_04285 PF03458 UPF0126 domain ECB94_04295 PF00679 Elongation factor G C-terminus ECB94_04295 PF03144 Elongation factor Tu domain 2 ECB94_04295 PF00009 Elongation factor Tu GTP binding domain ECB94_04295 PF03764 Elongation factor G, domain IV ECB94_04295 PF14492 Elongation Factor G, domain II ECB94_04300 PF01264 Chorismate synthase ECB94_04305 PF05175 Methyltransferase small domain ECB94_04310 PF01713 Smr domain ECB94_04315 PF00300 Histidine phosphatase superfamily (branch 1) ECB94_04320 PF16187 Middle or third domain of peptidase_M16 ECB94_04320 PF00675 Insulinase (Peptidase family M16) ECB94_04320 PF05193 Peptidase M16 inactive domain ECB94_04325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECB94_04325 PF00378 Enoyl-CoA hydratase/isomerase ECB94_04325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECB94_04330 PF00108 Thiolase, N-terminal domain ECB94_04330 PF02803 Thiolase, C-terminal domain ECB94_04335 PF04542 Sigma-70 region 2 ECB94_04335 PF08281 Sigma-70, region 4 ECB94_04345 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ECB94_04350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ECB94_04355 PF04333 MlaA lipoprotein ECB94_04360 PF03918 Cytochrome C biogenesis protein ECB94_04365 PF03918 Cytochrome C biogenesis protein ECB94_04370 PF08534 Redoxin ECB94_04375 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ECB94_04375 PF01578 Cytochrome C assembly protein ECB94_04380 PF03100 CcmE ECB94_04385 PF04995 Heme exporter protein D (CcmD) ECB94_04390 PF01578 Cytochrome C assembly protein ECB94_04395 PF03379 CcmB protein ECB94_04400 PF00005 ABC transporter ECB94_04410 PF01584 CheW-like domain ECB94_04420 PF13614 AAA domain ECB94_04425 PF01339 CheB methylesterase ECB94_04425 PF00072 Response regulator receiver domain ECB94_04430 PF07194 P2 response regulator binding domain ECB94_04430 PF02895 Signal transducing histidine kinase, homodimeric domain ECB94_04430 PF01584 CheW-like domain ECB94_04430 PF01627 Hpt domain ECB94_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_04435 PF04344 Chemotaxis phosphatase, CheZ ECB94_04440 PF00072 Response regulator receiver domain ECB94_04445 PF04545 Sigma-70, region 4 ECB94_04445 PF04539 Sigma-70 region 3 ECB94_04445 PF04542 Sigma-70 region 2 ECB94_04450 PF10609 NUBPL iron-transfer P-loop NTPase ECB94_04455 PF00448 SRP54-type protein, GTPase domain ECB94_04460 PF00771 FHIPEP family ECB94_04470 PF01312 FlhB HrpN YscU SpaS Family ECB94_04475 PF01311 Bacterial export proteins, family 1 ECB94_04480 PF01313 Bacterial export proteins, family 3 ECB94_04485 PF00813 FliP family ECB94_04490 PF04347 Flagellar biosynthesis protein, FliO ECB94_04495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ECB94_04500 PF02154 Flagellar motor switch protein FliM ECB94_04500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ECB94_04520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_04520 PF18269 T3SS EscN ATPase C-terminal domain ECB94_04530 PF01706 FliG C-terminal domain ECB94_04530 PF14841 FliG middle domain ECB94_04530 PF14842 FliG N-terminal domain ECB94_04535 PF08345 Flagellar M-ring protein C-terminal ECB94_04535 PF01514 Secretory protein of YscJ/FliF family ECB94_04540 PF02049 Flagellar hook-basal body complex protein FliE ECB94_04545 PF00158 Sigma-54 interaction domain ECB94_04545 PF00072 Response regulator receiver domain ECB94_04545 PF02954 Bacterial regulatory protein, Fis family ECB94_04550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_04550 PF00512 His Kinase A (phospho-acceptor) domain ECB94_04555 PF00072 Response regulator receiver domain ECB94_04555 PF00158 Sigma-54 interaction domain ECB94_04555 PF02954 Bacterial regulatory protein, Fis family ECB94_04560 PF02561 Flagellar protein FliS ECB94_04570 PF07195 Flagellar hook-associated protein 2 C-terminus ECB94_04570 PF02465 Flagellar hook-associated protein 2 N-terminus ECB94_04570 PF07196 Flagellin hook IN motif ECB94_04575 PF03646 FlaG protein ECB94_04580 PF00700 Bacterial flagellin C-terminal helical region ECB94_04580 PF00669 Bacterial flagellin N-terminal helical region ECB94_04580 PF07196 Flagellin hook IN motif ECB94_04585 PF00700 Bacterial flagellin C-terminal helical region ECB94_04585 PF07196 Flagellin hook IN motif ECB94_04585 PF00669 Bacterial flagellin N-terminal helical region ECB94_04590 PF00700 Bacterial flagellin C-terminal helical region ECB94_04590 PF07196 Flagellin hook IN motif ECB94_04590 PF00669 Bacterial flagellin N-terminal helical region ECB94_04600 PF07196 Flagellin hook IN motif ECB94_04600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_04605 PF10135 Rod binding protein ECB94_04605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ECB94_04610 PF02119 Flagellar P-ring protein ECB94_04615 PF02107 Flagellar L-ring protein ECB94_04620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_04620 PF00460 Flagella basal body rod protein ECB94_04625 PF00460 Flagella basal body rod protein ECB94_04625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_04630 PF07559 Flagellar basal body protein FlaE ECB94_04630 PF00460 Flagella basal body rod protein ECB94_04635 PF13861 FlgD Tudor-like domain ECB94_04635 PF03963 Flagellar hook capping protein - N-terminal region ECB94_04635 PF13860 FlgD Ig-like domain ECB94_04640 PF00460 Flagella basal body rod protein ECB94_04640 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_04645 PF00460 Flagella basal body rod protein ECB94_04650 PF01739 CheR methyltransferase, SAM binding domain ECB94_04650 PF03705 CheR methyltransferase, all-alpha domain ECB94_04655 PF01584 CheW-like domain ECB94_04655 PF00072 Response regulator receiver domain ECB94_04715 PF01810 LysE type translocator ECB94_04725 PF01638 HxlR-like helix-turn-helix ECB94_04750 PF01047 MarR family ECB94_04760 PF01098 Cell cycle protein ECB94_04765 PF09335 SNARE associated Golgi protein ECB94_04775 PF04076 Bacterial OB fold (BOF) protein ECB94_04780 PF13580 SIS domain ECB94_04790 PF01464 Transglycosylase SLT domain ECB94_04790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ECB94_04795 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_04805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_04805 PF03466 LysR substrate binding domain ECB94_04810 PF07690 Major Facilitator Superfamily ECB94_04815 PF05231 MASE1 ECB94_04815 PF07730 Histidine kinase ECB94_04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_04820 PF00072 Response regulator receiver domain ECB94_04820 PF00196 Bacterial regulatory proteins, luxR family ECB94_04825 PF07690 Major Facilitator Superfamily ECB94_04830 PF00155 Aminotransferase class I and II ECB94_04835 PF03553 Na+/H+ antiporter family ECB94_04840 PF00356 Bacterial regulatory proteins, lacI family ECB94_04845 PF00271 Helicase conserved C-terminal domain ECB94_04845 PF00270 DEAD/DEAH box helicase ECB94_04860 PF01769 Divalent cation transporter ECB94_04860 PF00571 CBS domain ECB94_04860 PF03448 MgtE intracellular N domain ECB94_04870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_04880 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_04885 PF04962 KduI/IolB family ECB94_04890 PF00378 Enoyl-CoA hydratase/isomerase ECB94_04900 PF01553 Acyltransferase ECB94_04905 PF04608 Phosphatidylglycerophosphatase A ECB94_04910 PF02769 AIR synthase related protein, C-terminal domain ECB94_04910 PF00586 AIR synthase related protein, N-terminal domain ECB94_04920 PF00885 6,7-dimethyl-8-ribityllumazine synthase ECB94_04925 PF00925 GTP cyclohydrolase II ECB94_04925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ECB94_04930 PF00677 Lumazine binding domain ECB94_04935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ECB94_04935 PF01872 RibD C-terminal domain ECB94_04945 PF00849 RNA pseudouridylate synthase ECB94_04950 PF04287 tRNA pseudouridine synthase C ECB94_04975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ECB94_04980 PF00171 Aldehyde dehydrogenase family ECB94_04985 PF01472 PUA domain ECB94_04985 PF00696 Amino acid kinase family ECB94_04990 PF07417 Sigma factor-binding transcriptional regulator Crl ECB94_05000 PF00156 Phosphoribosyl transferase domain ECB94_05005 PF00860 Permease family ECB94_05010 PF01546 Peptidase family M20/M25/M40 ECB94_05010 PF07687 Peptidase dimerisation domain ECB94_05015 PF06786 Uncharacterised protein family (UPF0253) ECB94_05025 PF00209 Sodium:neurotransmitter symporter family ECB94_05035 PF01272 Transcription elongation factor, GreA/GreB, C-term ECB94_05035 PF03449 Transcription elongation factor, N-terminal ECB94_05040 PF00817 impB/mucB/samB family ECB94_05040 PF11799 impB/mucB/samB family C-terminal domain ECB94_05045 PF04400 (Na+)-NQR maturation NqrM ECB94_05050 PF02424 ApbE family ECB94_05055 PF00175 Oxidoreductase NAD-binding domain ECB94_05055 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_05055 PF00970 Oxidoreductase FAD-binding domain ECB94_05060 PF02508 Rnf-Nqr subunit, membrane protein ECB94_05065 PF02508 Rnf-Nqr subunit, membrane protein ECB94_05070 PF04205 FMN-binding domain ECB94_05075 PF03116 NQR2, RnfD, RnfE family ECB94_05080 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ECB94_05080 PF11973 NQRA C-terminal domain ECB94_05085 PF01722 BolA-like protein ECB94_05090 PF05175 Methyltransferase small domain ECB94_05100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ECB94_05105 PF07690 Major Facilitator Superfamily ECB94_05115 PF04542 Sigma-70 region 2 ECB94_05115 PF04545 Sigma-70, region 4 ECB94_05125 PF03502 Nucleoside-specific channel-forming protein, Tsx ECB94_05130 PF02558 Ketopantoate reductase PanE/ApbA ECB94_05130 PF08546 Ketopantoate reductase PanE/ApbA C terminal ECB94_05135 PF01965 DJ-1/PfpI family ECB94_05140 PF00266 Aminotransferase class-V ECB94_05145 PF02657 Fe-S metabolism associated domain ECB94_05150 PF00899 ThiF family ECB94_05155 PF03562 MltA specific insert domain ECB94_05155 PF06725 3D domain ECB94_05175 PF13538 UvrD-like helicase C-terminal domain ECB94_05180 PF00580 UvrD/REP helicase N-terminal domain ECB94_05180 PF12705 PD-(D/E)XK nuclease superfamily ECB94_05180 PF13361 UvrD-like helicase C-terminal domain ECB94_05185 PF17946 RecC C-terminal domain ECB94_05195 PF03466 LysR substrate binding domain ECB94_05195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_05200 PF07130 YebG protein ECB94_05205 PF14602 Hexapeptide repeat of succinyl-transferase ECB94_05205 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ECB94_05210 PF02357 Transcription termination factor nusG ECB94_05215 PF00854 POT family ECB94_05220 PF00762 Ferrochelatase ECB94_05225 PF05191 Adenylate kinase, active site lid ECB94_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_05230 PF00183 Hsp90 protein ECB94_05235 PF00486 Transcriptional regulatory protein, C terminal ECB94_05240 PF17323 Trans-membrane regulatory protein ToxS ECB94_05245 PF07196 Flagellin hook IN motif ECB94_05245 PF00700 Bacterial flagellin C-terminal helical region ECB94_05245 PF00669 Bacterial flagellin N-terminal helical region ECB94_05250 PF00669 Bacterial flagellin N-terminal helical region ECB94_05250 PF07196 Flagellin hook IN motif ECB94_05250 PF00700 Bacterial flagellin C-terminal helical region ECB94_05255 PF04261 Dyp-type peroxidase family ECB94_05260 PF11143 Protein of unknown function (DUF2919) ECB94_05280 PF03960 ArsC family ECB94_05285 PF07687 Peptidase dimerisation domain ECB94_05285 PF01546 Peptidase family M20/M25/M40 ECB94_05290 PF02557 D-alanyl-D-alanine carboxypeptidase ECB94_05305 PF00701 Dihydrodipicolinate synthetase family ECB94_05310 PF01842 ACT domain ECB94_05315 PF00578 AhpC/TSA family ECB94_05320 PF01594 AI-2E family transporter ECB94_05330 PF13181 Tetratricopeptide repeat ECB94_05330 PF01435 Peptidase family M48 ECB94_05335 PF03960 ArsC family ECB94_05340 PF03358 NADPH-dependent FMN reductase ECB94_05355 PF00860 Permease family ECB94_05370 PF00551 Formyl transferase ECB94_05375 PF13230 Glutamine amidotransferases class-II ECB94_05380 PF13580 SIS domain ECB94_05385 PF02770 Acyl-CoA dehydrogenase, middle domain ECB94_05385 PF09317 Domain of unknown function (DUF1974) ECB94_05385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ECB94_05385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ECB94_05395 PF00929 Exonuclease ECB94_05400 PF00075 RNase H ECB94_05405 PF08241 Methyltransferase domain ECB94_05410 PF16123 Hydroxyacylglutathione hydrolase C-terminus ECB94_05415 PF01464 Transglycosylase SLT domain ECB94_05415 PF01476 LysM domain ECB94_05425 PF00543 Nitrogen regulatory protein P-II ECB94_05430 PF00034 Cytochrome c ECB94_05435 PF11734 TilS substrate C-terminal domain ECB94_05435 PF01171 PP-loop family ECB94_05435 PF09179 TilS substrate binding domain ECB94_05440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ECB94_05445 PF14579 Helix-hairpin-helix motif ECB94_05445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ECB94_05445 PF01336 OB-fold nucleic acid binding domain ECB94_05445 PF02811 PHP domain ECB94_05445 PF07733 Bacterial DNA polymerase III alpha NTPase domain ECB94_05450 PF01351 Ribonuclease HII ECB94_05455 PF02684 Lipid-A-disaccharide synthetase ECB94_05460 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_05460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ECB94_05465 PF07977 FabA-like domain ECB94_05470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ECB94_05470 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_05475 PF03938 Outer membrane protein (OmpH-like) ECB94_05480 PF01103 Surface antigen ECB94_05480 PF07244 Surface antigen variable number repeat ECB94_05485 PF17820 PDZ domain ECB94_05485 PF02163 Peptidase family M50 ECB94_05490 PF13288 DXP reductoisomerase C-terminal domain ECB94_05490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ECB94_05490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ECB94_05500 PF01255 Putative undecaprenyl diphosphate synthase ECB94_05505 PF01765 Ribosome recycling factor ECB94_05510 PF00696 Amino acid kinase family ECB94_05515 PF00889 Elongation factor TS ECB94_05520 PF00318 Ribosomal protein S2 ECB94_05525 PF00557 Metallopeptidase family M24 ECB94_05530 PF01909 Nucleotidyltransferase domain ECB94_05530 PF08335 GlnD PII-uridylyltransferase ECB94_05530 PF01966 HD domain ECB94_05530 PF01842 ACT domain ECB94_05535 PF11944 Protein of unknown function (DUF3461) ECB94_05540 PF03806 AbgT putative transporter family ECB94_05545 PF01980 tRNA-methyltransferase O ECB94_05545 PF18389 TrmO C-terminal domain ECB94_05550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECB94_05550 PF04073 Aminoacyl-tRNA editing domain ECB94_05550 PF03129 Anticodon binding domain ECB94_05565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ECB94_05565 PF02769 AIR synthase related protein, C-terminal domain ECB94_05565 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ECB94_05570 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_05570 PF01464 Transglycosylase SLT domain ECB94_05575 PF14437 MafB19-like deaminase ECB94_05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_05580 PF03466 LysR substrate binding domain ECB94_05585 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_05585 PF00107 Zinc-binding dehydrogenase ECB94_05590 PF00756 Putative esterase ECB94_05595 PF03806 AbgT putative transporter family ECB94_05620 PF07963 Prokaryotic N-terminal methylation motif ECB94_05620 PF00114 Pilin (bacterial filament) ECB94_05625 PF00226 DnaJ domain ECB94_05625 PF00684 DnaJ central domain ECB94_05625 PF01556 DnaJ C terminal domain ECB94_05630 PF00012 Hsp70 protein ECB94_05635 PF00375 Sodium:dicarboxylate symporter family ECB94_05640 PF01025 GrpE ECB94_05650 PF02463 RecF/RecN/SMC N terminal domain ECB94_05655 PF04355 SmpA / OmlA family ECB94_05660 PF03658 RnfH family Ubiquitin ECB94_05665 PF03364 Polyketide cyclase / dehydrase and lipid transport ECB94_05670 PF01668 SmpB protein ECB94_05680 PF12805 FUSC-like inner membrane protein yccS ECB94_05705 PF08329 Chitinase A, N-terminal domain ECB94_05705 PF00704 Glycosyl hydrolases family 18 ECB94_05710 PF08543 Phosphomethylpyrimidine kinase ECB94_05715 PF00005 ABC transporter ECB94_05720 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_05725 PF09084 NMT1/THI5 like ECB94_05730 PF03070 TENA/THI-4/PQQC family ECB94_05735 PF01235 Sodium:alanine symporter family ECB94_05740 PF01184 GPR1/FUN34/yaaH family ECB94_05745 PF00117 Glutamine amidotransferase class-I ECB94_05745 PF02540 NAD synthase ECB94_05745 PF00958 GMP synthase C terminal domain ECB94_05750 PF00478 IMP dehydrogenase / GMP reductase domain ECB94_05750 PF00571 CBS domain ECB94_05755 PF13742 OB-fold nucleic acid binding domain ECB94_05755 PF02601 Exonuclease VII, large subunit ECB94_05765 PF00990 Diguanylate cyclase, GGDEF domain ECB94_05765 PF00563 EAL domain ECB94_05765 PF03707 Bacterial signalling protein N terminal repeat ECB94_05775 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ECB94_05775 PF01926 50S ribosome-binding GTPase ECB94_05780 PF13360 PQQ-like domain ECB94_05785 PF09976 Tetratricopeptide repeat-like domain ECB94_05790 PF03129 Anticodon binding domain ECB94_05790 PF13393 Histidyl-tRNA synthetase ECB94_05795 PF04551 GcpE protein ECB94_05800 PF13464 Domain of unknown function (DUF4115) ECB94_05805 PF04055 Radical SAM superfamily ECB94_05810 PF00334 Nucleoside diphosphate kinase ECB94_05815 PF12404 Peptidase ECB94_05815 PF00883 Cytosol aminopeptidase family, catalytic domain ECB94_05820 PF04384 Iron-sulphur cluster assembly ECB94_05825 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_05830 PF00012 Hsp70 protein ECB94_05835 PF07743 HSCB C-terminal oligomerisation domain ECB94_05835 PF00226 DnaJ domain ECB94_05840 PF01521 Iron-sulphur cluster biosynthesis ECB94_05845 PF01592 NifU-like N terminal domain ECB94_05850 PF00266 Aminotransferase class-V ECB94_05855 PF02082 Transcriptional regulator ECB94_05860 PF00588 SpoU rRNA Methylase family ECB94_05865 PF00459 Inositol monophosphatase family ECB94_05870 PF02355 Protein export membrane protein ECB94_05870 PF07549 SecD/SecF GG Motif ECB94_05875 PF07549 SecD/SecF GG Motif ECB94_05875 PF02355 Protein export membrane protein ECB94_05875 PF13721 SecD export protein N-terminal TM region ECB94_05880 PF02699 Preprotein translocase subunit ECB94_05885 PF01702 Queuine tRNA-ribosyltransferase ECB94_05890 PF02547 Queuosine biosynthesis protein ECB94_05895 PF00571 CBS domain ECB94_05900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_05900 PF03466 LysR substrate binding domain ECB94_05905 PF00578 AhpC/TSA family ECB94_05905 PF10417 C-terminal domain of 1-Cys peroxiredoxin ECB94_05910 PF03932 CutC family ECB94_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_05915 PF03466 LysR substrate binding domain ECB94_05925 PF01895 PhoU domain ECB94_05930 PF00005 ABC transporter ECB94_05935 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_05940 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_05945 PF02503 Polyphosphate kinase middle domain ECB94_05945 PF13089 Polyphosphate kinase N-terminal domain ECB94_05945 PF17941 Polyphosphate kinase C-terminal domain 1 ECB94_05945 PF13090 Polyphosphate kinase C-terminal domain 2 ECB94_05950 PF02541 Ppx/GppA phosphatase family ECB94_05955 PF12849 PBP superfamily domain ECB94_05960 PF00989 PAS fold ECB94_05960 PF00512 His Kinase A (phospho-acceptor) domain ECB94_05960 PF11808 Phosphate regulon sensor protein PhoR ECB94_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_05965 PF00072 Response regulator receiver domain ECB94_05965 PF00486 Transcriptional regulatory protein, C terminal ECB94_05970 PF04381 Putative exonuclease, RdgC ECB94_05980 PF00037 4Fe-4S binding domain ECB94_06030 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_06030 PF02861 Clp amino terminal domain, pathogenicity island component ECB94_06030 PF10431 C-terminal, D2-small domain, of ClpB protein ECB94_06030 PF07724 AAA domain (Cdc48 subfamily) ECB94_06030 PF17871 AAA lid domain ECB94_06040 PF00849 RNA pseudouridylate synthase ECB94_06040 PF01479 S4 domain ECB94_06045 PF13525 Outer membrane lipoprotein ECB94_06050 PF01464 Transglycosylase SLT domain ECB94_06050 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_06055 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ECB94_06060 PF00800 Prephenate dehydratase ECB94_06060 PF01817 Chorismate mutase type II ECB94_06065 PF00691 OmpA family ECB94_06065 PF01389 OmpA-like transmembrane domain ECB94_06070 PF01931 Protein of unknown function DUF84 ECB94_06075 PF01371 Trp repressor protein ECB94_06080 PF14718 Soluble lytic murein transglycosylase L domain ECB94_06080 PF01464 Transglycosylase SLT domain ECB94_06085 PF12848 ABC transporter ECB94_06085 PF00005 ABC transporter ECB94_06090 PF01551 Peptidase family M23 ECB94_06090 PF04225 Opacity-associated protein A LysM-like domain ECB94_06095 PF02153 Prephenate dehydrogenase ECB94_06095 PF01817 Chorismate mutase type II ECB94_06100 PF00793 DAHP synthetase I family ECB94_06105 PF06580 Histidine kinase ECB94_06105 PF07694 5TMR of 5TMR-LYT ECB94_06110 PF04397 LytTr DNA-binding domain ECB94_06110 PF00072 Response regulator receiver domain ECB94_06115 PF00933 Glycosyl hydrolase family 3 N terminal domain ECB94_06120 PF03702 Anhydro-N-acetylmuramic acid kinase ECB94_06125 PF01380 SIS domain ECB94_06135 PF02554 Carbon starvation protein CstA ECB94_06140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ECB94_06140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ECB94_06145 PF00797 N-acetyltransferase ECB94_06150 PF14821 Threonine synthase N terminus ECB94_06150 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_06155 PF00288 GHMP kinases N terminal domain ECB94_06155 PF08544 GHMP kinases C terminal ECB94_06160 PF13840 ACT domain ECB94_06160 PF00696 Amino acid kinase family ECB94_06160 PF00742 Homoserine dehydrogenase ECB94_06160 PF01842 ACT domain ECB94_06160 PF03447 Homoserine dehydrogenase, NAD binding domain ECB94_06170 PF03737 Aldolase/RraA ECB94_06180 PF00072 Response regulator receiver domain ECB94_06180 PF00486 Transcriptional regulatory protein, C terminal ECB94_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_06190 PF00512 His Kinase A (phospho-acceptor) domain ECB94_06190 PF18415 Histidine kinase receptor ArcB trans-membrane domain ECB94_06190 PF01627 Hpt domain ECB94_06190 PF00989 PAS fold ECB94_06190 PF00072 Response regulator receiver domain ECB94_06195 PF16199 Radical_SAM C-terminal domain ECB94_06195 PF04055 Radical SAM superfamily ECB94_06200 PF01493 GXGXG motif ECB94_06200 PF01645 Conserved region in glutamate synthase ECB94_06200 PF04898 Glutamate synthase central domain ECB94_06200 PF00310 Glutamine amidotransferases class-II ECB94_06205 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ECB94_06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_06210 PF01493 GXGXG motif ECB94_06210 PF01645 Conserved region in glutamate synthase ECB94_06210 PF04898 Glutamate synthase central domain ECB94_06210 PF00310 Glutamine amidotransferases class-II ECB94_06215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ECB94_06215 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_06235 PF01497 Periplasmic binding protein ECB94_06240 PF03458 UPF0126 domain ECB94_06245 PF00005 ABC transporter ECB94_06255 PF03466 LysR substrate binding domain ECB94_06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_06260 PF01925 Sulfite exporter TauE/SafE ECB94_06270 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ECB94_06270 PF02142 MGS-like domain ECB94_06270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ECB94_06275 PF00117 Glutamine amidotransferase class-I ECB94_06275 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ECB94_06285 PF00293 NUDIX domain ECB94_06290 PF02810 SEC-C motif ECB94_06290 PF01043 SecA preprotein cross-linking domain ECB94_06290 PF07516 SecA Wing and Scaffold domain ECB94_06290 PF07517 SecA DEAD-like domain ECB94_06295 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ECB94_06300 PF00091 Tubulin/FtsZ family, GTPase domain ECB94_06300 PF12327 FtsZ family, C-terminal domain ECB94_06305 PF02491 SHS2 domain inserted in FTSA ECB94_06310 PF03799 Cell division protein FtsQ ECB94_06310 PF08478 POTRA domain, FtsQ-type ECB94_06315 PF01225 Mur ligase family, catalytic domain ECB94_06315 PF02875 Mur ligase family, glutamate ligase domain ECB94_06315 PF08245 Mur ligase middle domain ECB94_06320 PF04101 Glycosyltransferase family 28 C-terminal domain ECB94_06320 PF03033 Glycosyltransferase family 28 N-terminal domain ECB94_06325 PF01098 Cell cycle protein ECB94_06330 PF02875 Mur ligase family, glutamate ligase domain ECB94_06330 PF08245 Mur ligase middle domain ECB94_06335 PF00953 Glycosyl transferase family 4 ECB94_06335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ECB94_06340 PF02875 Mur ligase family, glutamate ligase domain ECB94_06340 PF01225 Mur ligase family, catalytic domain ECB94_06340 PF08245 Mur ligase middle domain ECB94_06345 PF01225 Mur ligase family, catalytic domain ECB94_06345 PF08245 Mur ligase middle domain ECB94_06345 PF02875 Mur ligase family, glutamate ligase domain ECB94_06350 PF03717 Penicillin-binding Protein dimerisation domain ECB94_06350 PF00905 Penicillin binding protein transpeptidase domain ECB94_06355 PF04999 Cell division protein FtsL ECB94_06360 PF01795 MraW methylase family ECB94_06370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ECB94_06375 PF04348 LppC putative lipoprotein ECB94_06380 PF02021 Uncharacterised protein family UPF0102 ECB94_06385 PF13580 SIS domain ECB94_06390 PF04972 BON domain ECB94_06395 PF10369 Small subunit of acetolactate synthase ECB94_06400 PF00205 Thiamine pyrophosphate enzyme, central domain ECB94_06400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ECB94_06400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ECB94_06405 PF00873 AcrB/AcrD/AcrF family ECB94_06415 PF01521 Iron-sulphur cluster biosynthesis ECB94_06420 PF00202 Aminotransferase class-III ECB94_06425 PF01594 AI-2E family transporter ECB94_06430 PF08468 Methyltransferase small domain N-terminal ECB94_06430 PF05175 Methyltransferase small domain ECB94_06435 PF00072 Response regulator receiver domain ECB94_06435 PF09308 LuxQ, periplasmic ECB94_06435 PF00512 His Kinase A (phospho-acceptor) domain ECB94_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_06440 PF11791 Aconitate B N-terminal domain ECB94_06440 PF00330 Aconitase family (aconitate hydratase) ECB94_06440 PF06434 Aconitate hydratase 2 N-terminus ECB94_06445 PF01734 Patatin-like phospholipase ECB94_06450 PF00912 Transglycosylase ECB94_06450 PF14814 Bifunctional transglycosylase second domain ECB94_06450 PF00905 Penicillin binding protein transpeptidase domain ECB94_06455 PF00270 DEAD/DEAH box helicase ECB94_06455 PF04408 Helicase associated domain (HA2) ECB94_06455 PF00271 Helicase conserved C-terminal domain ECB94_06455 PF08482 ATP-dependent helicase C-terminal ECB94_06460 PF03749 Sugar fermentation stimulation protein RE domain ECB94_06460 PF17746 SfsA N-terminal OB domain ECB94_06465 PF01258 Prokaryotic dksA/traR C4-type zinc finger ECB94_06470 PF00749 tRNA synthetases class I (E and Q), catalytic domain ECB94_06475 PF12627 Probable RNA and SrmB- binding site of polymerase A ECB94_06475 PF01743 Poly A polymerase head domain ECB94_06475 PF12626 Polymerase A arginine-rich C-terminus ECB94_06480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ECB94_06485 PF02548 Ketopantoate hydroxymethyltransferase ECB94_06490 PF02569 Pantoate-beta-alanine ligase ECB94_06495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_06495 PF12729 Four helix bundle sensory module for signal transduction ECB94_06495 PF00672 HAMP domain ECB94_06500 PF00027 Cyclic nucleotide-binding domain ECB94_06500 PF00520 Ion transport protein ECB94_06505 PF01928 CYTH domain ECB94_06510 PF01865 Protein of unknown function DUF47 ECB94_06515 PF01384 Phosphate transporter family ECB94_06520 PF08239 Bacterial SH3 domain ECB94_06525 PF04545 Sigma-70, region 4 ECB94_06525 PF00140 Sigma-70 factor, region 1.2 ECB94_06525 PF04542 Sigma-70 region 2 ECB94_06525 PF04539 Sigma-70 region 3 ECB94_06530 PF01476 LysM domain ECB94_06530 PF01551 Peptidase family M23 ECB94_06540 PF01975 Survival protein SurE ECB94_06545 PF01142 tRNA pseudouridine synthase D (TruD) ECB94_06550 PF02542 YgbB family ECB94_06555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ECB94_06560 PF04977 Septum formation initiator ECB94_06570 PF07715 TonB-dependent Receptor Plug Domain ECB94_06570 PF00593 TonB dependent receptor ECB94_06580 PF00990 Diguanylate cyclase, GGDEF domain ECB94_06585 PF01758 Sodium Bile acid symporter family ECB94_06605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ECB94_06605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ECB94_06610 PF01022 Bacterial regulatory protein, arsR family ECB94_06615 PF01380 SIS domain ECB94_06615 PF01418 Helix-turn-helix domain, rpiR family ECB94_06620 PF08244 Glycosyl hydrolases family 32 C terminal ECB94_06620 PF00251 Glycosyl hydrolases family 32 N-terminal domain ECB94_06625 PF00367 phosphotransferase system, EIIB ECB94_06625 PF02378 Phosphotransferase system, EIIC ECB94_06630 PF02502 Ribose/Galactose Isomerase ECB94_06635 PF00834 Ribulose-phosphate 3 epimerase family ECB94_06640 PF01022 Bacterial regulatory protein, arsR family ECB94_06645 PF13419 Haloacid dehalogenase-like hydrolase ECB94_06650 PF02887 Pyruvate kinase, alpha/beta domain ECB94_06650 PF00224 Pyruvate kinase, barrel domain ECB94_06670 PF00482 Type II secretion system (T2SS), protein F ECB94_06675 PF00437 Type II/IV secretion system protein ECB94_06710 PF05946 Toxin-coregulated pilus subunit TcpA ECB94_06710 PF07963 Prokaryotic N-terminal methylation motif ECB94_06735 PF04386 Stringent starvation protein B ECB94_06740 PF02798 Glutathione S-transferase, N-terminal domain ECB94_06740 PF00043 Glutathione S-transferase, C-terminal domain ECB94_06745 PF02167 Cytochrome C1 family ECB94_06750 PF00033 Cytochrome b/b6/petB ECB94_06750 PF00032 Cytochrome b(C-terminal)/b6/petD ECB94_06755 PF00355 Rieske [2Fe-2S] domain ECB94_06755 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ECB94_06760 PF00380 Ribosomal protein S9/S16 ECB94_06765 PF00572 Ribosomal protein L13 ECB94_06770 PF03969 AFG1-like ATPase ECB94_06775 PF06295 Protein of unknown function (DUF1043) ECB94_06780 PF00595 PDZ domain ECB94_06785 PF13180 PDZ domain ECB94_06790 PF00521 DNA gyrase/topoisomerase IV, subunit A ECB94_06790 PF03989 DNA gyrase C-terminal domain, beta-propeller ECB94_06795 PF01751 Toprim domain ECB94_06795 PF00986 DNA gyrase B subunit, carboxyl terminus ECB94_06795 PF00204 DNA gyrase B ECB94_06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_06800 PF05728 Uncharacterised protein family (UPF0227) ECB94_06805 PF00149 Calcineurin-like phosphoesterase ECB94_06810 PF06853 Protein of unknown function (DUF1249) ECB94_06815 PF00293 NUDIX domain ECB94_06820 PF02321 Outer membrane efflux protein ECB94_06830 PF08335 GlnD PII-uridylyltransferase ECB94_06830 PF03710 Glutamate-ammonia ligase adenylyltransferase ECB94_06835 PF01061 ABC-2 type transporter ECB94_06840 PF00005 ABC transporter ECB94_06845 PF00916 Sulfate permease family ECB94_06845 PF01740 STAS domain ECB94_06850 PF00484 Carbonic anhydrase ECB94_06855 PF00156 Phosphoribosyl transferase domain ECB94_06860 PF00440 Bacterial regulatory proteins, tetR family ECB94_06865 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_06865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_06870 PF00364 Biotin-requiring enzyme ECB94_06870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ECB94_06870 PF02817 e3 binding domain ECB94_06875 PF17831 Pyruvate dehydrogenase E1 component middle domain ECB94_06875 PF00456 Transketolase, thiamine diphosphate binding domain ECB94_06880 PF07729 FCD domain ECB94_06880 PF00392 Bacterial regulatory proteins, gntR family ECB94_06885 PF01510 N-acetylmuramoyl-L-alanine amidase ECB94_06890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ECB94_06890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ECB94_06900 PF00437 Type II/IV secretion system protein ECB94_06900 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ECB94_06905 PF00482 Type II secretion system (T2SS), protein F ECB94_06910 PF01478 Type IV leader peptidase family ECB94_06910 PF06750 Bacterial Peptidase A24 N-terminal domain ECB94_06915 PF01121 Dephospho-CoA kinase ECB94_06925 PF03884 DNA gyrase inhibitor YacG ECB94_06930 PF01245 Ribosomal protein L19 ECB94_06935 PF01746 tRNA (Guanine-1)-methyltransferase ECB94_06940 PF05239 PRC-barrel domain ECB94_06940 PF01782 RimM N-terminal domain ECB94_06945 PF00886 Ribosomal protein S16 ECB94_06950 PF00448 SRP54-type protein, GTPase domain ECB94_06950 PF02881 SRP54-type protein, helical bundle domain ECB94_06950 PF02978 Signal peptide binding domain ECB94_06955 PF01578 Cytochrome C assembly protein ECB94_06960 PF03471 Transporter associated domain ECB94_06960 PF00571 CBS domain ECB94_06960 PF01595 Cyclin M transmembrane N-terminal domain ECB94_06965 PF02607 B12 binding domain ECB94_06965 PF02310 B12 binding domain ECB94_06965 PF02965 Vitamin B12 dependent methionine synthase, activation domain ECB94_06965 PF02574 Homocysteine S-methyltransferase ECB94_06965 PF00809 Pterin binding enzyme ECB94_06970 PF00999 Sodium/hydrogen exchanger family ECB94_06995 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ECB94_06995 PF01464 Transglycosylase SLT domain ECB94_07005 PF00633 Helix-hairpin-helix motif ECB94_07005 PF00730 HhH-GPD superfamily base excision DNA repair protein ECB94_07005 PF14815 NUDIX domain ECB94_07010 PF02390 Putative methyltransferase ECB94_07025 PF06969 HemN C-terminal domain ECB94_07025 PF04055 Radical SAM superfamily ECB94_07030 PF01725 Ham1 family ECB94_07040 PF02594 Uncharacterised ACR, YggU family COG1872 ECB94_07045 PF02325 YGGT family ECB94_07050 PF03807 NADP oxidoreductase coenzyme F420-dependent ECB94_07050 PF14748 Pyrroline-5-carboxylate reductase dimerisation ECB94_07055 PF01168 Alanine racemase, N-terminal domain ECB94_07060 PF00437 Type II/IV secretion system protein ECB94_07065 PF00437 Type II/IV secretion system protein ECB94_07160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ECB94_07160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ECB94_07165 PF00175 Oxidoreductase NAD-binding domain ECB94_07165 PF00667 FAD binding domain ECB94_07165 PF00258 Flavodoxin ECB94_07180 PF01207 Dihydrouridine synthase (Dus) ECB94_07210 PF07885 Ion channel ECB94_07225 PF06892 Phage regulatory protein CII (CP76) ECB94_07255 PF05840 Bacteriophage replication gene A protein (GPA) ECB94_07280 PF07157 DNA circularisation protein N-terminus ECB94_07325 PF00959 Phage lysozyme ECB94_07370 PF10948 Protein of unknown function (DUF2635) ECB94_07375 PF04984 Phage tail sheath protein subtilisin-like domain ECB94_07375 PF17482 Phage tail sheath C-terminal domain ECB94_07375 PF17482 Phage tail sheath C-terminal domain ECB94_07375 PF04984 Phage tail sheath protein subtilisin-like domain ECB94_07425 PF01475 Ferric uptake regulator family ECB94_07435 PF03739 Lipopolysaccharide export system permease LptF/LptG ECB94_07440 PF03739 Lipopolysaccharide export system permease LptF/LptG ECB94_07445 PF02789 Cytosol aminopeptidase family, N-terminal domain ECB94_07445 PF00883 Cytosol aminopeptidase family, catalytic domain ECB94_07450 PF04364 DNA polymerase III chi subunit, HolC ECB94_07455 PF08264 Anticodon-binding domain of tRNA ECB94_07455 PF00133 tRNA synthetases class I (I, L, M and V) ECB94_07455 PF10458 Valyl tRNA synthetase tRNA binding arm ECB94_07460 PF00266 Aminotransferase class-V ECB94_07465 PF01842 ACT domain ECB94_07465 PF00696 Amino acid kinase family ECB94_07490 PF01966 HD domain ECB94_07515 PF00342 Phosphoglucose isomerase ECB94_07520 PF01894 Uncharacterised protein family UPF0047 ECB94_07525 PF01168 Alanine racemase, N-terminal domain ECB94_07525 PF00842 Alanine racemase, C-terminal domain ECB94_07530 PF00772 DnaB-like helicase N terminal domain ECB94_07530 PF03796 DnaB-like helicase C terminal domain ECB94_07540 PF01281 Ribosomal protein L9, N-terminal domain ECB94_07540 PF03948 Ribosomal protein L9, C-terminal domain ECB94_07545 PF01084 Ribosomal protein S18 ECB94_07550 PF01250 Ribosomal protein S6 ECB94_07555 PF01112 Asparaginase ECB94_07560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_07570 PF00999 Sodium/hydrogen exchanger family ECB94_07570 PF02254 TrkA-N domain ECB94_07575 PF02525 Flavodoxin-like fold ECB94_07580 PF00005 ABC transporter ECB94_07580 PF12848 ABC transporter ECB94_07590 PF01810 LysE type translocator ECB94_07595 PF00392 Bacterial regulatory proteins, gntR family ECB94_07595 PF00155 Aminotransferase class I and II ECB94_07600 PF00561 alpha/beta hydrolase fold ECB94_07605 PF06794 Uncharacterised protein family (UPF0270) ECB94_07610 PF00485 Phosphoribulokinase / Uridine kinase family ECB94_07615 PF13545 Crp-like helix-turn-helix domain ECB94_07615 PF00027 Cyclic nucleotide-binding domain ECB94_07625 PF00171 Aldehyde dehydrogenase family ECB94_07630 PF04958 Arginine N-succinyltransferase beta subunit ECB94_07635 PF00202 Aminotransferase class-III ECB94_07640 PF00117 Glutamine amidotransferase class-I ECB94_07650 PF00579 tRNA synthetases class I (W and Y) ECB94_07655 PF13419 Haloacid dehalogenase-like hydrolase ECB94_07660 PF00834 Ribulose-phosphate 3 epimerase family ECB94_07665 PF02086 D12 class N6 adenine-specific DNA methyltransferase ECB94_07680 PF01202 Shikimate kinase ECB94_07685 PF03958 Bacterial type II/III secretion system short domain ECB94_07685 PF00263 Bacterial type II and III secretion system protein ECB94_07685 PF11741 AMIN domain ECB94_07685 PF07660 Secretin and TonB N terminus short domain ECB94_07710 PF00905 Penicillin binding protein transpeptidase domain ECB94_07710 PF00912 Transglycosylase ECB94_07710 PF17092 Penicillin-binding protein OB-like domain ECB94_07715 PF03466 LysR substrate binding domain ECB94_07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_07720 PF08534 Redoxin ECB94_07720 PF00462 Glutaredoxin ECB94_07725 PF01042 Endoribonuclease L-PSP ECB94_07730 PF00583 Acetyltransferase (GNAT) family ECB94_07730 PF00206 Lyase ECB94_07730 PF14698 Argininosuccinate lyase C-terminal ECB94_07735 PF00764 Arginosuccinate synthase ECB94_07740 PF00696 Amino acid kinase family ECB94_07745 PF02774 Semialdehyde dehydrogenase, dimerisation domain ECB94_07745 PF01118 Semialdehyde dehydrogenase, NAD binding domain ECB94_07760 PF03551 Transcriptional regulator PadR-like family ECB94_07760 PF10400 Virulence activator alpha C-term ECB94_07765 PF02219 Methylenetetrahydrofolate reductase ECB94_07770 PF03447 Homoserine dehydrogenase, NAD binding domain ECB94_07770 PF00742 Homoserine dehydrogenase ECB94_07770 PF00696 Amino acid kinase family ECB94_07775 PF01053 Cys/Met metabolism PLP-dependent enzyme ECB94_07780 PF01340 Met Apo-repressor, MetJ ECB94_07785 PF00390 Malic enzyme, N-terminal domain ECB94_07785 PF03949 Malic enzyme, NAD binding domain ECB94_07795 PF00270 DEAD/DEAH box helicase ECB94_07795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ECB94_07795 PF18074 Primosomal protein N C-terminal domain ECB94_07795 PF17764 3′ DNA-binding domain (3′BD) ECB94_07795 PF00271 Helicase conserved C-terminal domain ECB94_07800 PF00356 Bacterial regulatory proteins, lacI family ECB94_07820 PF01040 UbiA prenyltransferase family ECB94_07825 PF03737 Aldolase/RraA ECB94_07830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ECB94_07830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ECB94_07830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ECB94_07835 PF02397 Bacterial sugar transferase ECB94_07840 PF01370 NAD dependent epimerase/dehydratase family ECB94_07845 PF02719 Polysaccharide biosynthesis protein ECB94_07860 PF01370 NAD dependent epimerase/dehydratase family ECB94_07865 PF16363 GDP-mannose 4,6 dehydratase ECB94_07905 PF00300 Histidine phosphatase superfamily (branch 1) ECB94_07910 PF00534 Glycosyl transferases group 1 ECB94_07930 PF00005 ABC transporter ECB94_07940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_07940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_07940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_07940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_07945 PF01050 Mannose-6-phosphate isomerase ECB94_07945 PF00483 Nucleotidyl transferase ECB94_07950 PF02350 UDP-N-acetylglucosamine 2-epimerase ECB94_07955 PF01370 NAD dependent epimerase/dehydratase family ECB94_07965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ECB94_07970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ECB94_07985 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) ECB94_07990 PF00535 Glycosyl transferase family 2 ECB94_08005 PF00534 Glycosyl transferases group 1 ECB94_08005 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ECB94_08015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ECB94_08020 PF00535 Glycosyl transferase family 2 ECB94_08025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ECB94_08030 PF01467 Cytidylyltransferase-like ECB94_08035 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ECB94_08040 PF00156 Phosphoribosyl transferase domain ECB94_08045 PF03725 3' exoribonuclease family, domain 2 ECB94_08045 PF01138 3' exoribonuclease family, domain 1 ECB94_08050 PF08340 Domain of unknown function (DUF1732) ECB94_08050 PF03755 YicC-like family, N-terminal region ECB94_08060 PF00884 Sulfatase ECB94_08065 PF00860 Permease family ECB94_08070 PF00625 Guanylate kinase ECB94_08075 PF01192 RNA polymerase Rpb6 ECB94_08080 PF02824 TGS domain ECB94_08080 PF04607 Region found in RelA / SpoT proteins ECB94_08080 PF13291 ACT domain ECB94_08085 PF00588 SpoU rRNA Methylase family ECB94_08085 PF12105 SpoU, rRNA methylase, C-terminal ECB94_08090 PF00270 DEAD/DEAH box helicase ECB94_08090 PF00271 Helicase conserved C-terminal domain ECB94_08090 PF17191 RecG wedge domain ECB94_08095 PF00672 HAMP domain ECB94_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_08095 PF00512 His Kinase A (phospho-acceptor) domain ECB94_08100 PF00486 Transcriptional regulatory protein, C terminal ECB94_08100 PF00072 Response regulator receiver domain ECB94_08110 PF01272 Transcription elongation factor, GreA/GreB, C-term ECB94_08110 PF03449 Transcription elongation factor, N-terminal ECB94_08130 PF00577 Outer membrane usher protein ECB94_08130 PF13954 PapC N-terminal domain ECB94_08130 PF13953 PapC C-terminal domain ECB94_08145 PF04222 Protein of unknown function (DUF416) ECB94_08150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_08160 PF01208 Uroporphyrinogen decarboxylase (URO-D) ECB94_08165 PF00293 NUDIX domain ECB94_08165 PF09297 NADH pyrophosphatase zinc ribbon domain ECB94_08170 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ECB94_08175 PF00623 RNA polymerase Rpb1, domain 2 ECB94_08175 PF04998 RNA polymerase Rpb1, domain 5 ECB94_08175 PF05000 RNA polymerase Rpb1, domain 4 ECB94_08175 PF04983 RNA polymerase Rpb1, domain 3 ECB94_08175 PF04997 RNA polymerase Rpb1, domain 1 ECB94_08180 PF00562 RNA polymerase Rpb2, domain 6 ECB94_08180 PF10385 RNA polymerase beta subunit external 1 domain ECB94_08180 PF04563 RNA polymerase beta subunit ECB94_08180 PF04561 RNA polymerase Rpb2, domain 2 ECB94_08180 PF04560 RNA polymerase Rpb2, domain 7 ECB94_08180 PF04565 RNA polymerase Rpb2, domain 3 ECB94_08185 PF00542 Ribosomal protein L7/L12 C-terminal domain ECB94_08185 PF16320 Ribosomal protein L7/L12 dimerisation domain ECB94_08190 PF00466 Ribosomal protein L10 ECB94_08200 PF00298 Ribosomal protein L11, RNA binding domain ECB94_08200 PF03946 Ribosomal protein L11, N-terminal domain ECB94_08205 PF02357 Transcription termination factor nusG ECB94_08205 PF00467 KOW motif ECB94_08210 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ECB94_08215 PF03143 Elongation factor Tu C-terminal domain ECB94_08215 PF00009 Elongation factor Tu GTP binding domain ECB94_08215 PF03144 Elongation factor Tu domain 2 ECB94_08240 PF00485 Phosphoribulokinase / Uridine kinase family ECB94_08245 PF02237 Biotin protein ligase C terminal domain ECB94_08245 PF03099 Biotin/lipoate A/B protein ligase family ECB94_08245 PF08279 HTH domain ECB94_08250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ECB94_08250 PF01565 FAD binding domain ECB94_08260 PF13091 PLD-like domain ECB94_08270 PF00120 Glutamine synthetase, catalytic domain ECB94_08270 PF03951 Glutamine synthetase, beta-Grasp domain ECB94_08280 PF00512 His Kinase A (phospho-acceptor) domain ECB94_08280 PF00989 PAS fold ECB94_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_08285 PF02954 Bacterial regulatory protein, Fis family ECB94_08285 PF00072 Response regulator receiver domain ECB94_08285 PF00158 Sigma-54 interaction domain ECB94_08290 PF00990 Diguanylate cyclase, GGDEF domain ECB94_08290 PF00563 EAL domain ECB94_08290 PF03707 Bacterial signalling protein N terminal repeat ECB94_08295 PF06969 HemN C-terminal domain ECB94_08295 PF04055 Radical SAM superfamily ECB94_08305 PF04220 Der GTPase activator (YihI) ECB94_08315 PF00717 Peptidase S24-like ECB94_08315 PF01726 LexA DNA binding domain ECB94_08320 PF01553 Acyltransferase ECB94_08325 PF01040 UbiA prenyltransferase family ECB94_08330 PF04345 Chorismate lyase ECB94_08335 PF03748 Flagellar basal body-associated protein FliL ECB94_08340 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ECB94_08340 PF01694 Rhomboid family ECB94_08345 PF00581 Rhodanese-like domain ECB94_08350 PF00140 Sigma-70 factor, region 1.2 ECB94_08350 PF04542 Sigma-70 region 2 ECB94_08350 PF04545 Sigma-70, region 4 ECB94_08355 PF18075 FtsX extracellular domain ECB94_08360 PF00005 ABC transporter ECB94_08365 PF02881 SRP54-type protein, helical bundle domain ECB94_08365 PF00448 SRP54-type protein, GTPase domain ECB94_08380 PF01914 MarC family integral membrane protein ECB94_08415 PF08668 HDOD domain ECB94_08415 PF00563 EAL domain ECB94_08420 PF01810 LysE type translocator ECB94_08450 PF13419 Haloacid dehalogenase-like hydrolase ECB94_08455 PF00589 Phage integrase family ECB94_08455 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_08470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECB94_08470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECB94_08480 PF01491 Frataxin-like domain ECB94_08485 PF12633 Adenylate cyclase NT domain ECB94_08485 PF01295 Adenylate cyclase, class-I ECB94_08490 PF03900 Porphobilinogen deaminase, C-terminal domain ECB94_08490 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ECB94_08495 PF02602 Uroporphyrinogen-III synthase HemD ECB94_08505 PF07219 HemY protein N-terminus ECB94_08550 PF00175 Oxidoreductase NAD-binding domain ECB94_08555 PF00970 Oxidoreductase FAD-binding domain ECB94_08555 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_08555 PF00175 Oxidoreductase NAD-binding domain ECB94_08560 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ECB94_08570 PF07498 Rho termination factor, N-terminal domain ECB94_08570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_08570 PF07497 Rho termination factor, RNA-binding domain ECB94_08575 PF00085 Thioredoxin ECB94_08580 PF00270 DEAD/DEAH box helicase ECB94_08580 PF00271 Helicase conserved C-terminal domain ECB94_08585 PF02541 Ppx/GppA phosphatase family ECB94_08590 PF02592 Putative vitamin uptake transporter ECB94_08600 PF09382 RQC domain ECB94_08600 PF16124 RecQ zinc-binding ECB94_08600 PF00570 HRDC domain ECB94_08600 PF00271 Helicase conserved C-terminal domain ECB94_08600 PF00270 DEAD/DEAH box helicase ECB94_08605 PF00892 EamA-like transporter family ECB94_08610 PF12852 Cupin ECB94_08610 PF12833 Helix-turn-helix domain ECB94_08615 PF01810 LysE type translocator ECB94_08620 PF13361 UvrD-like helicase C-terminal domain ECB94_08620 PF00580 UvrD/REP helicase N-terminal domain ECB94_08630 PF05114 Protein of unknown function (DUF692) ECB94_08655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_08655 PF03466 LysR substrate binding domain ECB94_08660 PF00557 Metallopeptidase family M24 ECB94_08660 PF01321 Creatinase/Prolidase N-terminal domain ECB94_08665 PF04055 Radical SAM superfamily ECB94_08665 PF06968 Biotin and Thiamin Synthesis associated domain ECB94_08670 PF05690 Thiazole biosynthesis protein ThiG ECB94_08680 PF00899 ThiF family ECB94_08685 PF02581 Thiamine monophosphate synthase ECB94_08690 PF13667 ThiC-associated domain ECB94_08690 PF01964 Radical SAM ThiC family ECB94_08695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ECB94_08700 PF07731 Multicopper oxidase ECB94_08700 PF00394 Multicopper oxidase ECB94_08700 PF07732 Multicopper oxidase ECB94_08700 PF10518 TAT (twin-arginine translocation) pathway signal sequence ECB94_08750 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_08755 PF07369 Protein of unknown function (DUF1488) ECB94_08760 PF08501 Shikimate dehydrogenase substrate binding domain ECB94_08760 PF01488 Shikimate / quinate 5-dehydrogenase ECB94_08760 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ECB94_08765 PF01218 Coproporphyrinogen III oxidase ECB94_08770 PF01300 Telomere recombination ECB94_08775 PF00731 AIR carboxylase ECB94_08780 PF02222 ATP-grasp domain ECB94_08780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ECB94_08785 PF01396 Topoisomerase DNA binding C4 zinc finger ECB94_08790 PF04361 Protein of unknown function (DUF494) ECB94_08795 PF17782 DprA winged helix domain ECB94_08795 PF02481 DNA recombination-mediator protein A ECB94_08805 PF01327 Polypeptide deformylase ECB94_08810 PF02911 Formyl transferase, C-terminal domain ECB94_08810 PF00551 Formyl transferase ECB94_08815 PF01189 16S rRNA methyltransferase RsmB/F ECB94_08815 PF01029 NusB family ECB94_08820 PF02254 TrkA-N domain ECB94_08820 PF02080 TrkA-C domain ECB94_08825 PF02386 Cation transport protein ECB94_08830 PF03006 Haemolysin-III related ECB94_08835 PF07070 SpoOM protein ECB94_08845 PF06288 Protein of unknown function (DUF1040) ECB94_08850 PF12801 4Fe-4S binding domain ECB94_08850 PF13746 4Fe-4S dicluster domain ECB94_08850 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ECB94_08855 PF01636 Phosphotransferase enzyme family ECB94_08860 PF01323 DSBA-like thioredoxin domain ECB94_08865 PF01553 Acyltransferase ECB94_08880 PF13335 Magnesium chelatase, subunit ChlI C-terminal ECB94_08880 PF01078 Magnesium chelatase, subunit ChlI ECB94_08885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ECB94_08885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ECB94_08885 PF00205 Thiamine pyrophosphate enzyme, central domain ECB94_08895 PF01063 Amino-transferase class IV ECB94_08900 PF00920 Dehydratase family ECB94_08905 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_08905 PF00585 C-terminal regulatory domain of Threonine dehydratase ECB94_08910 PF03466 LysR substrate binding domain ECB94_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_08915 PF07690 Major Facilitator Superfamily ECB94_08920 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_08925 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_08930 PF12804 MobA-like NTP transferase domain ECB94_08930 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_08935 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ECB94_08935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ECB94_08940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_08940 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECB94_08945 PF00231 ATP synthase ECB94_08950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_08950 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECB94_08950 PF00306 ATP synthase alpha/beta chain, C terminal domain ECB94_08955 PF00213 ATP synthase delta (OSCP) subunit ECB94_08960 PF00430 ATP synthase B/B' CF(0) ECB94_08965 PF00137 ATP synthase subunit C ECB94_08970 PF00119 ATP synthase A chain ECB94_08975 PF03899 ATP synthase I chain ECB94_08980 PF17762 HTH domain found in ParB protein ECB94_08980 PF02195 ParB-like nuclease domain ECB94_08985 PF13614 AAA domain ECB94_08990 PF02527 rRNA small subunit methyltransferase G ECB94_08995 PF13932 GidA associated domain ECB94_08995 PF01134 Glucose inhibited division protein A ECB94_09000 PF00258 Flavodoxin ECB94_09005 PF01926 50S ribosome-binding GTPase ECB94_09005 PF12631 MnmE helical domain ECB94_09005 PF10396 GTP-binding protein TrmE N-terminus ECB94_09010 PF02096 60Kd inner membrane protein ECB94_09010 PF14849 YidC periplasmic domain ECB94_09020 PF00825 Ribonuclease P ECB94_09025 PF00468 Ribosomal protein L34 ECB94_09030 PF00005 ABC transporter ECB94_09035 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_09040 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_09045 PF08299 Bacterial dnaA protein helix-turn-helix ECB94_09045 PF00308 Bacterial dnaA protein ECB94_09045 PF11638 DnaA N-terminal domain ECB94_09050 PF02768 DNA polymerase III beta subunit, C-terminal domain ECB94_09050 PF00712 DNA polymerase III beta subunit, N-terminal domain ECB94_09050 PF02767 DNA polymerase III beta subunit, central domain ECB94_09055 PF02463 RecF/RecN/SMC N terminal domain ECB94_09060 PF00204 DNA gyrase B ECB94_09060 PF01751 Toprim domain ECB94_09060 PF00986 DNA gyrase B subunit, carboxyl terminus ECB94_09060 PF18053 DNA gyrase B subunit insert domain ECB94_09060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_09065 PF00011 Hsp20/alpha crystallin family ECB94_09070 PF00155 Aminotransferase class I and II ECB94_09075 PF02092 Glycyl-tRNA synthetase beta subunit ECB94_09075 PF05746 DALR anticodon binding domain ECB94_09080 PF02091 Glycyl-tRNA synthetase alpha subunit ECB94_09085 PF01169 Uncharacterized protein family UPF0016 ECB94_09095 PF01206 Sulfurtransferase TusA ECB94_09105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_09105 PF03466 LysR substrate binding domain ECB94_09110 PF00034 Cytochrome c ECB94_09115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ECB94_09120 PF00107 Zinc-binding dehydrogenase ECB94_09120 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_09125 PF02803 Thiolase, C-terminal domain ECB94_09125 PF00108 Thiolase, N-terminal domain ECB94_09130 PF00378 Enoyl-CoA hydratase/isomerase ECB94_09130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECB94_09130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECB94_09135 PF09186 Domain of unknown function (DUF1949) ECB94_09135 PF01205 Uncharacterized protein family UPF0029 ECB94_09140 PF02386 Cation transport protein ECB94_09145 PF12724 Flavodoxin domain ECB94_09195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_09195 PF03466 LysR substrate binding domain ECB94_09200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ECB94_09200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ECB94_09205 PF04380 Membrane fusogenic activity ECB94_09210 PF00873 AcrB/AcrD/AcrF family ECB94_09215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_09220 PF00440 Bacterial regulatory proteins, tetR family ECB94_09220 PF16295 Tetracyclin repressor-like, C-terminal domain ECB94_09225 PF13361 UvrD-like helicase C-terminal domain ECB94_09225 PF00580 UvrD/REP helicase N-terminal domain ECB94_09230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ECB94_09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_09275 PF03466 LysR substrate binding domain ECB94_09295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_09295 PF00005 ABC transporter ECB94_09300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_09310 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_09310 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_09325 PF00704 Glycosyl hydrolases family 18 ECB94_09325 PF06483 Chitinase C ECB94_09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_09330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_09340 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ECB94_09345 PF01432 Peptidase family M3 ECB94_09350 PF00689 Cation transporting ATPase, C-terminus ECB94_09350 PF00690 Cation transporter/ATPase, N-terminus ECB94_09355 PF01037 Lrp/AsnC ligand binding domain ECB94_09360 PF04445 Putative SAM-dependent methyltransferase ECB94_09370 PF00892 EamA-like transporter family ECB94_09375 PF00582 Universal stress protein family ECB94_09380 PF00210 Ferritin-like domain ECB94_09385 PF10625 Universal stress protein B (UspB) ECB94_09395 PF03313 Serine dehydratase alpha chain ECB94_09415 PF01464 Transglycosylase SLT domain ECB94_09415 PF01476 LysM domain ECB94_09435 PF00460 Flagella basal body rod protein ECB94_09440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_09440 PF00460 Flagella basal body rod protein ECB94_09445 PF13860 FlgD Ig-like domain ECB94_09445 PF13861 FlgD Tudor-like domain ECB94_09445 PF03963 Flagellar hook capping protein - N-terminal region ECB94_09450 PF07559 Flagellar basal body protein FlaE ECB94_09450 PF00460 Flagella basal body rod protein ECB94_09450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_09455 PF00460 Flagella basal body rod protein ECB94_09455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_09460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_09460 PF00460 Flagella basal body rod protein ECB94_09465 PF02107 Flagellar L-ring protein ECB94_09470 PF02119 Flagellar P-ring protein ECB94_09475 PF10135 Rod binding protein ECB94_09475 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ECB94_09480 PF00460 Flagella basal body rod protein ECB94_09480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_09485 PF00669 Bacterial flagellin N-terminal helical region ECB94_09505 PF13677 Membrane MotB of proton-channel complex MotA/MotB ECB94_09505 PF00691 OmpA family ECB94_09510 PF01618 MotA/TolQ/ExbB proton channel family ECB94_09515 PF04542 Sigma-70 region 2 ECB94_09515 PF04545 Sigma-70, region 4 ECB94_09520 PF03748 Flagellar basal body-associated protein FliL ECB94_09535 PF02561 Flagellar protein FliS ECB94_09540 PF07195 Flagellar hook-associated protein 2 C-terminus ECB94_09540 PF07196 Flagellin hook IN motif ECB94_09540 PF02465 Flagellar hook-associated protein 2 N-terminus ECB94_09545 PF00700 Bacterial flagellin C-terminal helical region ECB94_09545 PF00669 Bacterial flagellin N-terminal helical region ECB94_09555 PF00771 FHIPEP family ECB94_09560 PF01312 FlhB HrpN YscU SpaS Family ECB94_09565 PF01311 Bacterial export proteins, family 1 ECB94_09570 PF01313 Bacterial export proteins, family 3 ECB94_09575 PF00813 FliP family ECB94_09580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ECB94_09595 PF00158 Sigma-54 interaction domain ECB94_09595 PF00072 Response regulator receiver domain ECB94_09595 PF02954 Bacterial regulatory protein, Fis family ECB94_09600 PF02049 Flagellar hook-basal body complex protein FliE ECB94_09605 PF08345 Flagellar M-ring protein C-terminal ECB94_09605 PF01514 Secretory protein of YscJ/FliF family ECB94_09610 PF14842 FliG N-terminal domain ECB94_09610 PF01706 FliG C-terminal domain ECB94_09610 PF14841 FliG middle domain ECB94_09620 PF18269 T3SS EscN ATPase C-terminal domain ECB94_09620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_09630 PF02646 RmuC family ECB94_09635 PF01209 ubiE/COQ5 methyltransferase family ECB94_09640 PF02036 SCP-2 sterol transfer family ECB94_09645 PF03109 ABC1 family ECB94_09650 PF02416 mttA/Hcf106 family ECB94_09655 PF02416 mttA/Hcf106 family ECB94_09660 PF00902 Sec-independent protein translocase protein (TatC) ECB94_09665 PF01026 TatD related DNase ECB94_09670 PF00490 Delta-aminolevulinic acid dehydratase ECB94_09680 PF01367 5'-3' exonuclease, C-terminal SAM fold ECB94_09680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ECB94_09680 PF01612 3'-5' exonuclease ECB94_09680 PF00476 DNA polymerase family A ECB94_09685 PF01926 50S ribosome-binding GTPase ECB94_09690 PF00034 Cytochrome c ECB94_09700 PF01554 MatE ECB94_09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_09710 PF00440 Bacterial regulatory proteins, tetR family ECB94_09720 PF05958 tRNA (Uracil-5-)-methyltransferase ECB94_09725 PF07715 TonB-dependent Receptor Plug Domain ECB94_09725 PF00593 TonB dependent receptor ECB94_09735 PF01177 Asp/Glu/Hydantoin racemase ECB94_09835 PF03631 Virulence factor BrkB ECB94_09840 PF02580 D-Tyr-tRNA(Tyr) deacylase ECB94_09845 PF00583 Acetyltransferase (GNAT) family ECB94_09845 PF09500 Putative thioesterase (yiiD_Cterm) ECB94_09855 PF01293 Phosphoenolpyruvate carboxykinase ECB94_09860 PF01430 Hsp33 protein ECB94_09865 PF01479 S4 domain ECB94_09870 PF11356 Type II secretion system protein C ECB94_09875 PF03958 Bacterial type II/III secretion system short domain ECB94_09875 PF00263 Bacterial type II and III secretion system protein ECB94_09880 PF00437 Type II/IV secretion system protein ECB94_09885 PF00482 Type II secretion system (T2SS), protein F ECB94_09890 PF07963 Prokaryotic N-terminal methylation motif ECB94_09890 PF08334 Type II secretion system (T2SS), protein G ECB94_09895 PF12019 Type II transport protein GspH ECB94_09900 PF07963 Prokaryotic N-terminal methylation motif ECB94_09900 PF02501 Type II secretion system (T2SS), protein I ECB94_09905 PF11612 Type II secretion system (T2SS), protein J ECB94_09905 PF07963 Prokaryotic N-terminal methylation motif ECB94_09910 PF03934 Type II secretion system (T2SS), protein K ECB94_09915 PF05134 Type II secretion system (T2SS), protein L ECB94_09915 PF12693 GspL periplasmic domain ECB94_09920 PF04612 Type II secretion system (T2SS), protein M ECB94_09925 PF01203 Type II secretion system (T2SS), protein N ECB94_09930 PF00459 Inositol monophosphatase family ECB94_09935 PF00293 NUDIX domain ECB94_09940 PF01106 NifU-like domain ECB94_09940 PF01521 Iron-sulphur cluster biosynthesis ECB94_09945 PF00156 Phosphoribosyl transferase domain ECB94_09950 PF00561 alpha/beta hydrolase fold ECB94_09960 PF17674 HHH domain ECB94_09960 PF00575 S1 RNA binding domain ECB94_09960 PF09371 Tex-like protein N-terminal domain ECB94_09960 PF16921 Tex protein YqgF-like domain ECB94_09965 PF08443 RimK-like ATP-grasp domain ECB94_09965 PF18030 RimK PreATP-grasp domain ECB94_09970 PF00571 CBS domain ECB94_09970 PF01595 Cyclin M transmembrane N-terminal domain ECB94_09975 PF00216 Bacterial DNA-binding protein ECB94_09985 PF02844 Phosphoribosylglycinamide synthetase, N domain ECB94_09985 PF02843 Phosphoribosylglycinamide synthetase, C domain ECB94_09985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ECB94_09995 PF13411 MerR HTH family regulatory protein ECB94_10000 PF18500 CadC C-terminal domain 1 ECB94_10000 PF00486 Transcriptional regulatory protein, C terminal ECB94_10005 PF13520 Amino acid permease ECB94_10010 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ECB94_10010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ECB94_10010 PF01276 Orn/Lys/Arg decarboxylase, major domain ECB94_10015 PF00672 HAMP domain ECB94_10015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_10015 PF17200 Single Cache domain 2 ECB94_10020 PF02954 Bacterial regulatory protein, Fis family ECB94_10025 PF01207 Dihydrouridine synthase (Dus) ECB94_10035 PF00289 Biotin carboxylase, N-terminal domain ECB94_10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ECB94_10035 PF02785 Biotin carboxylase C-terminal domain ECB94_10040 PF00364 Biotin-requiring enzyme ECB94_10045 PF01220 Dehydroquinase class II ECB94_10050 PF13193 AMP-binding enzyme C-terminal domain ECB94_10050 PF00501 AMP-binding enzyme ECB94_10050 PF16177 Acetyl-coenzyme A synthetase N-terminus ECB94_10065 PF12832 MFS_1 like family ECB94_10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_10070 PF00672 HAMP domain ECB94_10070 PF00072 Response regulator receiver domain ECB94_10070 PF01627 Hpt domain ECB94_10070 PF00512 His Kinase A (phospho-acceptor) domain ECB94_10085 PF00474 Sodium:solute symporter family ECB94_10095 PF00072 Response regulator receiver domain ECB94_10095 PF00196 Bacterial regulatory proteins, luxR family ECB94_10100 PF02683 Cytochrome C biogenesis protein transmembrane region ECB94_10100 PF11412 Disulphide bond corrector protein DsbC ECB94_10105 PF03605 Anaerobic c4-dicarboxylate membrane transporter ECB94_10110 PF00206 Lyase ECB94_10110 PF10415 Fumarase C C-terminus ECB94_10115 PF04186 FxsA cytoplasmic membrane protein ECB94_10125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ECB94_10125 PF06827 Zinc finger found in FPG and IleRS ECB94_10125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ECB94_10130 PF03279 Bacterial lipid A biosynthesis acyltransferase ECB94_10135 PF03279 Bacterial lipid A biosynthesis acyltransferase ECB94_10145 PF02441 Flavoprotein ECB94_10145 PF04127 DNA / pantothenate metabolism flavoprotein ECB94_10150 PF04002 RadC-like JAB domain ECB94_10160 PF00471 Ribosomal protein L33 ECB94_10165 PF00588 SpoU rRNA Methylase family ECB94_10170 PF18027 Cytosolic carboxypeptidase N-terminal domain ECB94_10170 PF00246 Zinc carboxypeptidase ECB94_10175 PF00672 HAMP domain ECB94_10175 PF16527 Two-component sensor protein CpxA, periplasmic domain ECB94_10175 PF00512 His Kinase A (phospho-acceptor) domain ECB94_10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_10180 PF00072 Response regulator receiver domain ECB94_10180 PF00486 Transcriptional regulatory protein, C terminal ECB94_10185 PF07813 LTXXQ motif family protein ECB94_10190 PF16916 Dimerisation domain of Zinc Transporter ECB94_10190 PF01545 Cation efflux family ECB94_10195 PF00365 Phosphofructokinase ECB94_10200 PF00121 Triosephosphate isomerase ECB94_10225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ECB94_10235 PF08360 QacR-like protein, C-terminal region ECB94_10235 PF00440 Bacterial regulatory proteins, tetR family ECB94_10245 PF01551 Peptidase family M23 ECB94_10250 PF01676 Metalloenzyme superfamily ECB94_10250 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ECB94_10255 PF00581 Rhodanese-like domain ECB94_10260 PF02556 Preprotein translocase subunit SecB ECB94_10265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ECB94_10265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ECB94_10270 PF06426 Serine acetyltransferase, N-terminal ECB94_10270 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_10275 PF01554 MatE ECB94_10280 PF00166 Chaperonin 10 Kd subunit ECB94_10285 PF00118 TCP-1/cpn60 chaperonin family ECB94_10295 PF02308 MgtC family ECB94_10300 PF04055 Radical SAM superfamily ECB94_10305 PF09285 Elongation factor P, C-terminal ECB94_10305 PF01132 Elongation factor P (EF-P) OB domain ECB94_10305 PF08207 Elongation factor P (EF-P) KOW-like domain ECB94_10315 PF02313 Fumarate reductase subunit D ECB94_10320 PF02300 Fumarate reductase subunit C ECB94_10325 PF13085 2Fe-2S iron-sulfur cluster binding domain ECB94_10325 PF13183 4Fe-4S dicluster domain ECB94_10330 PF02910 Fumarate reductase flavoprotein C-term ECB94_10330 PF00890 FAD binding domain ECB94_10335 PF00152 tRNA synthetases class II (D, K and N) ECB94_10345 PF02080 TrkA-C domain ECB94_10345 PF03600 Citrate transporter ECB94_10350 PF02666 Phosphatidylserine decarboxylase ECB94_10355 PF03193 RsgA GTPase ECB94_10360 PF00929 Exonuclease ECB94_10415 PF08331 Domain of unknown function (DUF1730) ECB94_10420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ECB94_10425 PF01520 N-acetylmuramoyl-L-alanine amidase ECB94_10430 PF08676 MutL C terminal dimerisation domain ECB94_10430 PF01119 DNA mismatch repair protein, C-terminal domain ECB94_10440 PF17209 Hfq protein ECB94_10445 PF01926 50S ribosome-binding GTPase ECB94_10445 PF13167 GTP-binding GTPase N-terminal ECB94_10445 PF16360 GTP-binding GTPase Middle Region ECB94_10450 PF01145 SPFH domain / Band 7 family ECB94_10450 PF12221 Bacterial membrane protein N terminal ECB94_10455 PF01145 SPFH domain / Band 7 family ECB94_10460 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ECB94_10465 PF00709 Adenylosuccinate synthetase ECB94_10470 PF08238 Sel1 repeat ECB94_10475 PF17876 Cold shock domain ECB94_10475 PF00575 S1 RNA binding domain ECB94_10475 PF08461 Ribonuclease R winged-helix domain ECB94_10475 PF08206 Ribonuclease B OB domain ECB94_10475 PF00773 RNB domain ECB94_10480 PF08032 RNA 2'-O ribose methyltransferase substrate binding ECB94_10480 PF00588 SpoU rRNA Methylase family ECB94_10485 PF04102 SlyX ECB94_10495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_10495 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ECB94_10500 PF13309 HTH domain ECB94_10500 PF08348 YheO-like PAS domain ECB94_10505 PF02635 DsrE/DsrF-like family ECB94_10510 PF02635 DsrE/DsrF-like family ECB94_10520 PF00164 Ribosomal protein S12/S23 ECB94_10525 PF00177 Ribosomal protein S7p/S5e ECB94_10530 PF03144 Elongation factor Tu domain 2 ECB94_10530 PF00679 Elongation factor G C-terminus ECB94_10530 PF00009 Elongation factor Tu GTP binding domain ECB94_10530 PF03764 Elongation factor G, domain IV ECB94_10530 PF14492 Elongation Factor G, domain II ECB94_10535 PF00009 Elongation factor Tu GTP binding domain ECB94_10535 PF03144 Elongation factor Tu domain 2 ECB94_10535 PF03143 Elongation factor Tu C-terminal domain ECB94_10540 PF04324 BFD-like [2Fe-2S] binding domain ECB94_10545 PF00210 Ferritin-like domain ECB94_10550 PF00338 Ribosomal protein S10p/S20e ECB94_10560 PF00573 Ribosomal protein L4/L1 family ECB94_10565 PF00276 Ribosomal protein L23 ECB94_10580 PF00237 Ribosomal protein L22p/L17e ECB94_10590 PF00252 Ribosomal protein L16p/L10e ECB94_10595 PF00831 Ribosomal L29 protein ECB94_10600 PF00366 Ribosomal protein S17 ECB94_10605 PF00238 Ribosomal protein L14p/L23e ECB94_10615 PF00281 Ribosomal protein L5 ECB94_10615 PF00673 ribosomal L5P family C-terminus ECB94_10620 PF00253 Ribosomal protein S14p/S29e ECB94_10630 PF00347 Ribosomal protein L6 ECB94_10635 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ECB94_10640 PF03719 Ribosomal protein S5, C-terminal domain ECB94_10640 PF00333 Ribosomal protein S5, N-terminal domain ECB94_10645 PF00327 Ribosomal protein L30p/L7e ECB94_10655 PF00344 SecY translocase ECB94_10660 PF00444 Ribosomal protein L36 ECB94_10665 PF00416 Ribosomal protein S13/S18 ECB94_10670 PF00411 Ribosomal protein S11 ECB94_10675 PF01479 S4 domain ECB94_10675 PF00163 Ribosomal protein S4/S9 N-terminal domain ECB94_10685 PF01196 Ribosomal protein L17 ECB94_10695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ECB94_10695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_10705 PF13673 Acetyltransferase (GNAT) domain ECB94_10710 PF02872 5'-nucleotidase, C-terminal domain ECB94_10710 PF00149 Calcineurin-like phosphoesterase ECB94_10715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ECB94_10715 PF10414 Sirohaem synthase dimerisation region ECB94_10715 PF14824 Sirohaem biosynthesis protein central ECB94_10720 PF01507 Phosphoadenosine phosphosulfate reductase family ECB94_10725 PF00009 Elongation factor Tu GTP binding domain ECB94_10730 PF03600 Citrate transporter ECB94_10730 PF02080 TrkA-C domain ECB94_10755 PF00005 ABC transporter ECB94_10770 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ECB94_10780 PF01625 Peptide methionine sulfoxide reductase ECB94_10785 PF01103 Surface antigen ECB94_10785 PF07244 Surface antigen variable number repeat ECB94_10785 PF17243 POTRA domain TamA domain 1 ECB94_10790 PF04357 TamB, inner membrane protein subunit of TAM complex ECB94_10805 PF00719 Inorganic pyrophosphatase ECB94_10815 PF01225 Mur ligase family, catalytic domain ECB94_10815 PF08245 Mur ligase middle domain ECB94_10815 PF02875 Mur ligase family, glutamate ligase domain ECB94_10820 PF02441 Flavoprotein ECB94_10830 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_10835 PF00005 ABC transporter ECB94_10840 PF04751 Protein of unknown function (DUF615) ECB94_10845 PF01523 Putative modulator of DNA gyrase ECB94_10850 PF00571 CBS domain ECB94_10850 PF01769 Divalent cation transporter ECB94_10850 PF03448 MgtE intracellular N domain ECB94_10855 PF00381 PTS HPr component phosphorylation site ECB94_10860 PF03668 P-loop ATPase protein family ECB94_10865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_10870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ECB94_10875 PF04552 Sigma-54, DNA binding domain ECB94_10875 PF04963 Sigma-54 factor, core binding domain ECB94_10875 PF00309 Sigma-54 factor, Activator interacting domain (AID) ECB94_10880 PF12399 Branched-chain amino acid ATP-binding cassette transporter ECB94_10880 PF00005 ABC transporter ECB94_10885 PF03968 OstA-like protein ECB94_10900 PF00571 CBS domain ECB94_10900 PF01380 SIS domain ECB94_10905 PF01699 Sodium/calcium exchanger protein ECB94_10910 PF00005 ABC transporter ECB94_10915 PF02405 Permease MlaE ECB94_10920 PF02470 MlaD protein ECB94_10925 PF05494 MlaC protein ECB94_10935 PF01722 BolA-like protein ECB94_10940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ECB94_10945 PF01553 Acyltransferase ECB94_10950 PF01042 Endoribonuclease L-PSP ECB94_10955 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ECB94_10955 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ECB94_10960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECB94_10960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECB94_10965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECB94_10965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECB94_10975 PF06877 Regulator of ribonuclease activity B ECB94_10985 PF01624 MutS domain I ECB94_10985 PF00488 MutS domain V ECB94_10985 PF05190 MutS family domain IV ECB94_10985 PF05192 MutS domain III ECB94_10985 PF05188 MutS domain II ECB94_10990 PF02464 Competence-damaged protein ECB94_10995 PF00154 recA bacterial DNA recombination protein ECB94_11000 PF02631 RecX family ECB94_11005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ECB94_11005 PF02272 DHHA1 domain ECB94_11005 PF01411 tRNA synthetases class II (A) ECB94_11010 PF01842 ACT domain ECB94_11010 PF13840 ACT domain ECB94_11010 PF00696 Amino acid kinase family ECB94_11015 PF02599 Global regulator protein family ECB94_11060 PF04277 Oxaloacetate decarboxylase, gamma chain ECB94_11065 PF02436 Conserved carboxylase domain ECB94_11065 PF00682 HMGL-like ECB94_11065 PF00364 Biotin-requiring enzyme ECB94_11070 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ECB94_11075 PF00107 Zinc-binding dehydrogenase ECB94_11075 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_11080 PF09335 SNARE associated Golgi protein ECB94_11085 PF05193 Peptidase M16 inactive domain ECB94_11085 PF00675 Insulinase (Peptidase family M16) ECB94_11090 PF04262 Glutamate-cysteine ligase ECB94_11100 PF03652 Holliday junction resolvase ECB94_11105 PF02622 Uncharacterized ACR, COG1678 ECB94_11110 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ECB94_11110 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ECB94_11115 PF04452 RNA methyltransferase ECB94_11120 PF04231 Endonuclease I ECB94_11125 PF17283 SprT-like zinc ribbon domain ECB94_11125 PF10263 SprT-like family ECB94_11135 PF00438 S-adenosylmethionine synthetase, N-terminal domain ECB94_11135 PF02773 S-adenosylmethionine synthetase, C-terminal domain ECB94_11135 PF02772 S-adenosylmethionine synthetase, central domain ECB94_11140 PF02779 Transketolase, pyrimidine binding domain ECB94_11140 PF02780 Transketolase, C-terminal domain ECB94_11140 PF00456 Transketolase, thiamine diphosphate binding domain ECB94_11150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ECB94_11150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ECB94_11155 PF00162 Phosphoglycerate kinase ECB94_11160 PF01116 Fructose-bisphosphate aldolase class-II ECB94_11165 PF00924 Mechanosensitive ion channel ECB94_11165 PF05552 Conserved TM helix ECB94_11175 PF01810 LysE type translocator ECB94_11180 PF03466 LysR substrate binding domain ECB94_11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_11190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ECB94_11190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_11190 PF01842 ACT domain ECB94_11195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ECB94_11200 PF01812 5-formyltetrahydrofolate cyclo-ligase family ECB94_11210 PF05164 Cell division protein ZapA ECB94_11220 PF01494 FAD binding domain ECB94_11225 PF01494 FAD binding domain ECB94_11235 PF04073 Aminoacyl-tRNA editing domain ECB94_11235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECB94_11235 PF03129 Anticodon binding domain ECB94_11245 PF03937 Flavinator of succinate dehydrogenase ECB94_11250 PF02910 Fumarate reductase flavoprotein C-term ECB94_11250 PF00890 FAD binding domain ECB94_11255 PF08281 Sigma-70, region 4 ECB94_11255 PF04542 Sigma-70 region 2 ECB94_11260 PF03872 Anti sigma-E protein RseA, N-terminal domain ECB94_11260 PF03873 Anti sigma-E protein RseA, C-terminal domain ECB94_11265 PF03888 MucB/RseB N-terminal domain ECB94_11265 PF17188 MucB/RseB C-terminal domain ECB94_11275 PF03144 Elongation factor Tu domain 2 ECB94_11275 PF00009 Elongation factor Tu GTP binding domain ECB94_11275 PF00679 Elongation factor G C-terminus ECB94_11275 PF06421 GTP-binding protein LepA C-terminus ECB94_11280 PF10502 Signal peptidase, peptidase S26 ECB94_11285 PF14622 Ribonuclease-III-like ECB94_11285 PF00035 Double-stranded RNA binding motif ECB94_11290 PF07650 KH domain ECB94_11290 PF01926 50S ribosome-binding GTPase ECB94_11300 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ECB94_11310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_11310 PF00672 HAMP domain ECB94_11310 PF00072 Response regulator receiver domain ECB94_11310 PF01627 Hpt domain ECB94_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_11310 PF00512 His Kinase A (phospho-acceptor) domain ECB94_11315 PF05958 tRNA (Uracil-5-)-methyltransferase ECB94_11315 PF01938 TRAM domain ECB94_11320 PF13291 ACT domain ECB94_11320 PF04607 Region found in RelA / SpoT proteins ECB94_11320 PF02824 TGS domain ECB94_11325 PF03819 MazG nucleotide pyrophosphohydrolase domain ECB94_11330 PF00117 Glutamine amidotransferase class-I ECB94_11330 PF06418 CTP synthase N-terminus ECB94_11335 PF03952 Enolase, N-terminal domain ECB94_11335 PF00113 Enolase, C-terminal TIM barrel domain ECB94_11345 PF12833 Helix-turn-helix domain ECB94_11345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ECB94_11350 PF00491 Arginase family ECB94_11355 PF02595 Glycerate kinase family ECB94_11360 PF02447 GntP family permease ECB94_11365 PF17853 GGDEF-like domain ECB94_11365 PF05651 Putative sugar diacid recognition ECB94_11365 PF13556 PucR C-terminal helix-turn-helix domain ECB94_11370 PF06062 Uncharacterised protein family (UPF0231) ECB94_11375 PF00543 Nitrogen regulatory protein P-II ECB94_11380 PF00909 Ammonium Transporter Family ECB94_11385 PF13416 Bacterial extracellular solute-binding protein ECB94_11395 PF08402 TOBE domain ECB94_11395 PF00005 ABC transporter ECB94_11400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_11400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_11400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_11400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_11405 PF06165 Glycosyltransferase family 36 ECB94_11405 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ECB94_11410 PF02838 Glycosyl hydrolase family 20, domain 2 ECB94_11410 PF00728 Glycosyl hydrolase family 20, catalytic domain ECB94_11415 PF01869 BadF/BadG/BcrA/BcrD ATPase family ECB94_11425 PF00005 ABC transporter ECB94_11425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_11430 PF00005 ABC transporter ECB94_11430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_11435 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_11435 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_11440 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_11445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_11460 PF04545 Sigma-70, region 4 ECB94_11460 PF04539 Sigma-70 region 3 ECB94_11460 PF03979 Sigma-70 factor, region 1.1 ECB94_11460 PF00140 Sigma-70 factor, region 1.2 ECB94_11460 PF04542 Sigma-70 region 2 ECB94_11460 PF04546 Sigma-70, non-essential region ECB94_11465 PF10410 DnaB-helicase binding domain of primase ECB94_11465 PF08278 DNA primase DnaG DnaB-binding ECB94_11465 PF08275 DNA primase catalytic core, N-terminal domain ECB94_11465 PF01807 CHC2 zinc finger ECB94_11470 PF09424 Yqey-like protein ECB94_11475 PF01165 Ribosomal protein S21 ECB94_11485 PF00561 alpha/beta hydrolase fold ECB94_11495 PF02152 Dihydroneopterin aldolase ECB94_11500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ECB94_11505 PF02673 Bacitracin resistance protein BacA ECB94_11510 PF01743 Poly A polymerase head domain ECB94_11510 PF01966 HD domain ECB94_11510 PF12627 Probable RNA and SrmB- binding site of polymerase A ECB94_11515 PF01471 Putative peptidoglycan binding domain ECB94_11515 PF13401 AAA domain ECB94_11530 PF17760 UvrA interaction domain ECB94_11530 PF17755 UvrA DNA-binding domain ECB94_11530 PF00005 ABC transporter ECB94_11535 PF00483 Nucleotidyl transferase ECB94_11540 PF00196 Bacterial regulatory proteins, luxR family ECB94_11545 PF00436 Single-strand binding protein family ECB94_11550 PF17157 Gammaproteobacterial periplasmic sensor domain ECB94_11550 PF00563 EAL domain ECB94_11550 PF00990 Diguanylate cyclase, GGDEF domain ECB94_11570 PF00263 Bacterial type II and III secretion system protein ECB94_11570 PF03958 Bacterial type II/III secretion system short domain ECB94_11570 PF07660 Secretin and TonB N terminus short domain ECB94_11570 PF11741 AMIN domain ECB94_11575 PF13401 AAA domain ECB94_11575 PF01471 Putative peptidoglycan binding domain ECB94_11585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ECB94_11585 PF00437 Type II/IV secretion system protein ECB94_11590 PF00482 Type II secretion system (T2SS), protein F ECB94_11600 PF07963 Prokaryotic N-terminal methylation motif ECB94_11600 PF00114 Pilin (bacterial filament) ECB94_11605 PF07963 Prokaryotic N-terminal methylation motif ECB94_11605 PF00114 Pilin (bacterial filament) ECB94_11640 PF04085 rod shape-determining protein MreC ECB94_11645 PF04093 rod shape-determining protein MreD ECB94_11650 PF02545 Maf-like protein ECB94_11655 PF10150 Ribonuclease E/G family ECB94_11655 PF00575 S1 RNA binding domain ECB94_11660 PF13116 Protein of unknown function ECB94_11660 PF13502 AsmA-like C-terminal region ECB94_11665 PF00795 Carbon-nitrogen hydrolase ECB94_11670 PF01523 Putative modulator of DNA gyrase ECB94_11675 PF02562 PhoH-like protein ECB94_11675 PF13638 PIN domain ECB94_11680 PF00176 SNF2 family N-terminal domain ECB94_11680 PF18339 RapA N-terminal Tudor like domain 1 ECB94_11680 PF18337 RapA N-terminal Tudor like domain ECB94_11680 PF00271 Helicase conserved C-terminal domain ECB94_11680 PF12137 RNA polymerase recycling family C-terminal ECB94_11685 PF00849 RNA pseudouridylate synthase ECB94_11690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_11690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ECB94_11695 PF00582 Universal stress protein family ECB94_11705 PF16868 NMT1-like family ECB94_11725 PF00348 Polyprenyl synthetase ECB94_11735 PF00829 Ribosomal prokaryotic L21 protein ECB94_11740 PF01016 Ribosomal L27 protein ECB94_11745 PF01926 50S ribosome-binding GTPase ECB94_11745 PF01018 GTP1/OBG ECB94_11750 PF04632 Fusaric acid resistance protein family ECB94_11755 PF06738 Putative threonine/serine exporter ECB94_11760 PF12821 Threonine/Serine exporter, ThrE ECB94_11765 PF00186 Dihydrofolate reductase ECB94_11770 PF00149 Calcineurin-like phosphoesterase ECB94_11775 PF04379 ApaG domain ECB94_11780 PF00398 Ribosomal RNA adenine dimethylase ECB94_11785 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ECB94_11790 PF00639 PPIC-type PPIASE domain ECB94_11790 PF09312 SurA N-terminal domain ECB94_11795 PF04453 LPS transport system D ECB94_11795 PF03968 OstA-like protein ECB94_11800 PF00226 DnaJ domain ECB94_11800 PF05099 Tellurite resistance protein TerB ECB94_11815 PF00694 Aconitase C-terminal domain ECB94_11820 PF00330 Aconitase family (aconitate hydratase) ECB94_11825 PF00180 Isocitrate/isopropylmalate dehydrogenase ECB94_11850 PF00873 AcrB/AcrD/AcrF family ECB94_11855 PF01569 PAP2 superfamily ECB94_11865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_11865 PF03466 LysR substrate binding domain ECB94_11870 PF00501 AMP-binding enzyme ECB94_11875 PF01551 Peptidase family M23 ECB94_11875 PF08525 Opacity-associated protein A N-terminal motif ECB94_11875 PF01476 LysM domain ECB94_11880 PF00579 tRNA synthetases class I (W and Y) ECB94_11880 PF01479 S4 domain ECB94_11890 PF01261 Xylose isomerase-like TIM barrel ECB94_11895 PF03167 Uracil DNA glycosylase superfamily ECB94_11910 PF03544 Gram-negative bacterial TonB protein C-terminal ECB94_11915 PF02472 Biopolymer transport protein ExbD/TolR ECB94_11920 PF01618 MotA/TolQ/ExbB proton channel family ECB94_11925 PF01618 MotA/TolQ/ExbB proton channel family ECB94_11940 PF00593 TonB dependent receptor ECB94_11940 PF07715 TonB-dependent Receptor Plug Domain ECB94_11945 PF12833 Helix-turn-helix domain ECB94_11955 PF01235 Sodium:alanine symporter family ECB94_11965 PF00271 Helicase conserved C-terminal domain ECB94_11965 PF00270 DEAD/DEAH box helicase ECB94_11970 PF05175 Methyltransferase small domain ECB94_11975 PF05525 Branched-chain amino acid transport protein ECB94_11980 PF00258 Flavodoxin ECB94_11985 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_11985 PF00589 Phage integrase family ECB94_11990 PF10411 Disulfide bond isomerase protein N-terminus ECB94_11990 PF13098 Thioredoxin-like domain ECB94_11995 PF17768 RecJ OB domain ECB94_11995 PF02272 DHHA1 domain ECB94_11995 PF01368 DHH family ECB94_12005 PF00152 tRNA synthetases class II (D, K and N) ECB94_12005 PF01336 OB-fold nucleic acid binding domain ECB94_12010 PF02954 Bacterial regulatory protein, Fis family ECB94_12010 PF00072 Response regulator receiver domain ECB94_12010 PF00158 Sigma-54 interaction domain ECB94_12020 PF00248 Aldo/keto reductase family ECB94_12030 PF02976 DNA mismatch repair enzyme MutH ECB94_12040 PF01590 GAF domain ECB94_12040 PF05524 PEP-utilising enzyme, N-terminal ECB94_12040 PF00391 PEP-utilising enzyme, mobile domain ECB94_12040 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_12045 PF01925 Sulfite exporter TauE/SafE ECB94_12050 PF01790 Prolipoprotein diacylglyceryl transferase ECB94_12055 PF00303 Thymidylate synthase ECB94_12075 PF02690 Na+/Pi-cotransporter ECB94_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_12080 PF03466 LysR substrate binding domain ECB94_12085 PF01022 Bacterial regulatory protein, arsR family ECB94_12090 PF01649 Ribosomal protein S20 ECB94_12095 PF03023 Lipid II flippase MurJ ECB94_12100 PF01687 Riboflavin kinase ECB94_12100 PF06574 FAD synthetase ECB94_12105 PF08264 Anticodon-binding domain of tRNA ECB94_12105 PF00133 tRNA synthetases class I (I, L, M and V) ECB94_12105 PF06827 Zinc finger found in FPG and IleRS ECB94_12110 PF01252 Signal peptidase (SPase) II ECB94_12115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_12120 PF02401 LytB protein ECB94_12130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ECB94_12135 PF03449 Transcription elongation factor, N-terminal ECB94_12135 PF01272 Transcription elongation factor, GreA/GreB, C-term ECB94_12140 PF01985 CRS1 / YhbY (CRM) domain ECB94_12145 PF01728 FtsJ-like methyltransferase ECB94_12150 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_12150 PF17862 AAA+ lid domain ECB94_12150 PF06480 FtsH Extracellular ECB94_12150 PF01434 Peptidase family M41 ECB94_12155 PF00809 Pterin binding enzyme ECB94_12160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_12160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_12160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_12160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_12165 PF03840 Preprotein translocase SecG subunit ECB94_12180 PF02576 RimP N-terminal domain ECB94_12180 PF17384 RimP C-terminal SH3 domain ECB94_12185 PF08529 NusA N-terminal domain ECB94_12185 PF13184 NusA-like KH domain ECB94_12185 PF00575 S1 RNA binding domain ECB94_12190 PF04760 Translation initiation factor IF-2, N-terminal region ECB94_12190 PF08364 Bacterial translation initiation factor IF-2 associated region ECB94_12190 PF11987 Translation-initiation factor 2 ECB94_12190 PF00009 Elongation factor Tu GTP binding domain ECB94_12195 PF02033 Ribosome-binding factor A ECB94_12200 PF01509 TruB family pseudouridylate synthase (N terminal domain) ECB94_12200 PF09157 Pseudouridine synthase II TruB, C-terminal ECB94_12200 PF16198 tRNA pseudouridylate synthase B C-terminal domain ECB94_12205 PF00312 Ribosomal protein S15 ECB94_12210 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ECB94_12210 PF01138 3' exoribonuclease family, domain 1 ECB94_12210 PF03725 3' exoribonuclease family, domain 2 ECB94_12210 PF00575 S1 RNA binding domain ECB94_12210 PF00013 KH domain ECB94_12215 PF13181 Tetratricopeptide repeat ECB94_12215 PF07719 Tetratricopeptide repeat ECB94_12225 PF01554 MatE ECB94_12240 PF03707 Bacterial signalling protein N terminal repeat ECB94_12240 PF00990 Diguanylate cyclase, GGDEF domain ECB94_12240 PF00563 EAL domain ECB94_12250 PF13508 Acetyltransferase (GNAT) domain ECB94_12260 PF00583 Acetyltransferase (GNAT) family ECB94_12320 PF01026 TatD related DNase ECB94_12325 PF01773 Na+ dependent nucleoside transporter N-terminus ECB94_12325 PF07670 Nucleoside recognition ECB94_12325 PF07662 Na+ dependent nucleoside transporter C-terminus ECB94_12330 PF01791 DeoC/LacD family aldolase ECB94_12335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ECB94_12335 PF00591 Glycosyl transferase family, a/b domain ECB94_12335 PF02885 Glycosyl transferase family, helical bundle domain ECB94_12340 PF01676 Metalloenzyme superfamily ECB94_12345 PF01048 Phosphorylase superfamily ECB94_12355 PF18429 Domain of unknown function (DUF5609) ECB94_12365 PF18073 Rubredoxin metal binding domain ECB94_12370 PF00009 Elongation factor Tu GTP binding domain ECB94_12370 PF03764 Elongation factor G, domain IV ECB94_12370 PF14492 Elongation Factor G, domain II ECB94_12370 PF03144 Elongation factor Tu domain 2 ECB94_12370 PF00679 Elongation factor G C-terminus ECB94_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_12375 PF03466 LysR substrate binding domain ECB94_12380 PF06568 Domain of unknown function (DUF1127) ECB94_12385 PF00501 AMP-binding enzyme ECB94_12390 PF00072 Response regulator receiver domain ECB94_12395 PF02417 Chromate transporter ECB94_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_12400 PF03466 LysR substrate binding domain ECB94_12405 PF13416 Bacterial extracellular solute-binding protein ECB94_12410 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_12415 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_12420 PF02929 Beta galactosidase small chain ECB94_12420 PF00703 Glycosyl hydrolases family 2 ECB94_12420 PF02837 Glycosyl hydrolases family 2, sugar binding domain ECB94_12420 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ECB94_12420 PF16353 Domain of unknown function(DUF4981) ECB94_12425 PF17912 MalK OB fold domain ECB94_12425 PF00005 ABC transporter ECB94_12430 PF01554 MatE ECB94_12435 PF13407 Periplasmic binding protein domain ECB94_12440 PF00005 ABC transporter ECB94_12445 PF02653 Branched-chain amino acid transport system / permease component ECB94_12450 PF16363 GDP-mannose 4,6 dehydratase ECB94_12455 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ECB94_12455 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ECB94_12460 PF10509 Galactokinase galactose-binding signature ECB94_12460 PF08544 GHMP kinases C terminal ECB94_12460 PF00288 GHMP kinases N terminal domain ECB94_12465 PF01263 Aldose 1-epimerase ECB94_12470 PF00356 Bacterial regulatory proteins, lacI family ECB94_12485 PF00356 Bacterial regulatory proteins, lacI family ECB94_12490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_12490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_12490 PF02378 Phosphotransferase system, EIIC ECB94_12495 PF12833 Helix-turn-helix domain ECB94_12505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_12515 PF00733 Asparagine synthase ECB94_12515 PF13537 Glutamine amidotransferase domain ECB94_12520 PF00999 Sodium/hydrogen exchanger family ECB94_12520 PF02254 TrkA-N domain ECB94_12525 PF01047 MarR family ECB94_12525 PF00480 ROK family ECB94_12530 PF01979 Amidohydrolase family ECB94_12535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ECB94_12535 PF00367 phosphotransferase system, EIIB ECB94_12535 PF02378 Phosphotransferase system, EIIC ECB94_12540 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ECB94_12540 PF00749 tRNA synthetases class I (E and Q), catalytic domain ECB94_12545 PF01475 Ferric uptake regulator family ECB94_12560 PF00258 Flavodoxin ECB94_12570 PF12697 Alpha/beta hydrolase family ECB94_12575 PF17206 SeqA protein N-terminal domain ECB94_12575 PF03925 SeqA protein C-terminal domain ECB94_12580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_12580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_12580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_12580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_12585 PF03466 LysR substrate binding domain ECB94_12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_12595 PF04241 Protein of unknown function (DUF423) ECB94_12600 PF01728 FtsJ-like methyltransferase ECB94_12600 PF18125 RlmM ferredoxin-like domain ECB94_12605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ECB94_12605 PF01367 5'-3' exonuclease, C-terminal SAM fold ECB94_12610 PF11892 Domain of unknown function (DUF3412) ECB94_12610 PF03641 Possible lysine decarboxylase ECB94_12610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ECB94_12615 PF00990 Diguanylate cyclase, GGDEF domain ECB94_12625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ECB94_12625 PF14489 QueF-like protein ECB94_12630 PF07348 Syd protein (SUKH-2) ECB94_12635 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) ECB94_12640 PF03180 NLPA lipoprotein ECB94_12645 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_12650 PF09383 NIL domain ECB94_12650 PF00005 ABC transporter ECB94_12665 PF00356 Bacterial regulatory proteins, lacI family ECB94_12670 PF00367 phosphotransferase system, EIIB ECB94_12670 PF02378 Phosphotransferase system, EIIC ECB94_12675 PF00128 Alpha amylase, catalytic domain ECB94_12675 PF16657 Maltogenic Amylase, C-terminal domain ECB94_12685 PF00464 Serine hydroxymethyltransferase ECB94_12695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ECB94_12695 PF04055 Radical SAM superfamily ECB94_12700 PF03099 Biotin/lipoate A/B protein ligase family ECB94_12705 PF04359 Protein of unknown function (DUF493) ECB94_12710 PF07943 Penicillin-binding protein 5, C-terminal domain ECB94_12710 PF00768 D-alanyl-D-alanine carboxypeptidase ECB94_12715 PF05036 Sporulation related domain ECB94_12715 PF03330 Lytic transglycolase ECB94_12720 PF01098 Cell cycle protein ECB94_12725 PF00905 Penicillin binding protein transpeptidase domain ECB94_12725 PF03717 Penicillin-binding Protein dimerisation domain ECB94_12730 PF02590 Predicted SPOUT methyltransferase ECB94_12740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ECB94_12740 PF06144 DNA polymerase III, delta subunit ECB94_12745 PF04390 Lipopolysaccharide-assembly ECB94_12750 PF13603 Leucyl-tRNA synthetase, Domain 2 ECB94_12750 PF08264 Anticodon-binding domain of tRNA ECB94_12750 PF00133 tRNA synthetases class I (I, L, M and V) ECB94_12755 PF07295 Zinc-ribbon containing domain ECB94_12765 PF04354 ZipA, C-terminal FtsZ-binding domain ECB94_12770 PF00533 BRCA1 C Terminus (BRCT) domain ECB94_12770 PF01653 NAD-dependent DNA ligase adenylation domain ECB94_12770 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ECB94_12770 PF03120 NAD-dependent DNA ligase OB-fold domain ECB94_12770 PF12826 Helix-hairpin-helix motif ECB94_12775 PF13609 Gram-negative porin ECB94_12780 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ECB94_12785 PF13411 MerR HTH family regulatory protein ECB94_12815 PF00403 Heavy-metal-associated domain ECB94_12820 PF00749 tRNA synthetases class I (E and Q), catalytic domain ECB94_12825 PF02780 Transketolase, C-terminal domain ECB94_12825 PF02779 Transketolase, pyrimidine binding domain ECB94_12825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ECB94_12830 PF00348 Polyprenyl synthetase ECB94_12835 PF02609 Exonuclease VII small subunit ECB94_12840 PF01618 MotA/TolQ/ExbB proton channel family ECB94_12845 PF13677 Membrane MotB of proton-channel complex MotA/MotB ECB94_12845 PF00691 OmpA family ECB94_12850 PF02568 Thiamine biosynthesis protein (ThiI) ECB94_12850 PF02926 THUMP domain ECB94_12860 PF01784 NIF3 (NGG1p interacting factor 3) ECB94_12865 PF00285 Citrate synthase, C-terminal domain ECB94_12870 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ECB94_12875 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ECB94_12880 PF00890 FAD binding domain ECB94_12880 PF02910 Fumarate reductase flavoprotein C-term ECB94_12885 PF13085 2Fe-2S iron-sulfur cluster binding domain ECB94_12890 PF02779 Transketolase, pyrimidine binding domain ECB94_12890 PF16870 2-oxoglutarate dehydrogenase C-terminal ECB94_12890 PF00676 Dehydrogenase E1 component ECB94_12890 PF16078 2-oxoglutarate dehydrogenase N-terminus ECB94_12895 PF00364 Biotin-requiring enzyme ECB94_12895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ECB94_12895 PF02817 e3 binding domain ECB94_12900 PF08442 ATP-grasp domain ECB94_12900 PF00549 CoA-ligase ECB94_12905 PF00549 CoA-ligase ECB94_12905 PF02629 CoA binding domain ECB94_12910 PF00950 ABC 3 transport family ECB94_12915 PF00005 ABC transporter ECB94_12920 PF01297 Zinc-uptake complex component A periplasmic ECB94_12925 PF12833 Helix-turn-helix domain ECB94_12935 PF02682 Carboxyltransferase domain, subdomain C and D ECB94_12940 PF03746 LamB/YcsF family ECB94_12945 PF04023 FeoA domain ECB94_12950 PF07670 Nucleoside recognition ECB94_12950 PF07664 Ferrous iron transport protein B C terminus ECB94_12950 PF02421 Ferrous iron transport protein B ECB94_12970 PF05746 DALR anticodon binding domain ECB94_12970 PF03485 Arginyl tRNA synthetase N terminal domain ECB94_12970 PF00750 tRNA synthetases class I (R) ECB94_12975 PF06185 YecM protein ECB94_12985 PF01842 ACT domain ECB94_12985 PF00551 Formyl transferase ECB94_12995 PF04851 Type III restriction enzyme, res subunit ECB94_12995 PF13307 Helicase C-terminal domain ECB94_13000 PF00814 Glycoprotease family ECB94_13020 PF13193 AMP-binding enzyme C-terminal domain ECB94_13020 PF00501 AMP-binding enzyme ECB94_13025 PF00570 HRDC domain ECB94_13025 PF01612 3'-5' exonuclease ECB94_13030 PF03776 Septum formation topological specificity factor MinE ECB94_13035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ECB94_13045 PF05166 YcgL domain ECB94_13050 PF13406 Transglycosylase SLT domain ECB94_13055 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ECB94_13055 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ECB94_13085 PF00271 Helicase conserved C-terminal domain ECB94_13085 PF00270 DEAD/DEAH box helicase ECB94_13100 PF01145 SPFH domain / Band 7 family ECB94_13100 PF16200 C-terminal region of band_7 ECB94_13105 PF00085 Thioredoxin ECB94_13110 PF00106 short chain dehydrogenase ECB94_13115 PF08338 Domain of unknown function (DUF1731) ECB94_13115 PF01370 NAD dependent epimerase/dehydratase family ECB94_13120 PF07556 Protein of unknown function (DUF1538) ECB94_13125 PF07556 Protein of unknown function (DUF1538) ECB94_13140 PF12850 Calcineurin-like phosphoesterase superfamily domain ECB94_13145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ECB94_13150 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_13150 PF00391 PEP-utilising enzyme, mobile domain ECB94_13150 PF05524 PEP-utilising enzyme, N-terminal ECB94_13155 PF00381 PTS HPr component phosphorylation site ECB94_13160 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_13165 PF00795 Carbon-nitrogen hydrolase ECB94_13170 PF00571 CBS domain ECB94_13170 PF03471 Transporter associated domain ECB94_13175 PF02130 Uncharacterized protein family UPF0054 ECB94_13180 PF02562 PhoH-like protein ECB94_13185 PF00919 Uncharacterized protein family UPF0004 ECB94_13185 PF01938 TRAM domain ECB94_13185 PF04055 Radical SAM superfamily ECB94_13195 PF01494 FAD binding domain ECB94_13200 PF10282 Lactonase, 7-bladed beta-propeller ECB94_13300 PF01926 50S ribosome-binding GTPase ECB94_13300 PF06071 Protein of unknown function (DUF933) ECB94_13310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ECB94_13310 PF14572 Phosphoribosyl synthetase-associated domain ECB94_13315 PF08544 GHMP kinases C terminal ECB94_13315 PF00288 GHMP kinases N terminal domain ECB94_13320 PF03550 Outer membrane lipoprotein LolB ECB94_13325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ECB94_13325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ECB94_13325 PF01488 Shikimate / quinate 5-dehydrogenase ECB94_13335 PF13847 Methyltransferase domain ECB94_13335 PF17827 PrmC N-terminal domain ECB94_13340 PF04247 Invasion gene expression up-regulator, SirB ECB94_13345 PF13369 Transglutaminase-like superfamily ECB94_13350 PF00793 DAHP synthetase I family ECB94_13355 PF00149 Calcineurin-like phosphoesterase ECB94_13355 PF02872 5'-nucleotidase, C-terminal domain ECB94_13360 PF04073 Aminoacyl-tRNA editing domain ECB94_13365 PF01479 S4 domain ECB94_13365 PF00849 RNA pseudouridylate synthase ECB94_13370 PF01713 Smr domain ECB94_13390 PF01568 Molydopterin dinucleotide binding domain ECB94_13390 PF00384 Molybdopterin oxidoreductase ECB94_13390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_13395 PF01312 FlhB HrpN YscU SpaS Family ECB94_13400 PF01311 Bacterial export proteins, family 1 ECB94_13405 PF01313 Bacterial export proteins, family 3 ECB94_13410 PF00813 FliP family ECB94_13415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ECB94_13425 PF00460 Flagella basal body rod protein ECB94_13430 PF00460 Flagella basal body rod protein ECB94_13430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_13435 PF03963 Flagellar hook capping protein - N-terminal region ECB94_13435 PF13860 FlgD Ig-like domain ECB94_13435 PF13861 FlgD Tudor-like domain ECB94_13440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_13440 PF07559 Flagellar basal body protein FlaE ECB94_13440 PF00460 Flagella basal body rod protein ECB94_13445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_13445 PF00460 Flagella basal body rod protein ECB94_13450 PF00460 Flagella basal body rod protein ECB94_13450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_13455 PF02107 Flagellar L-ring protein ECB94_13460 PF02119 Flagellar P-ring protein ECB94_13465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ECB94_13465 PF10135 Rod binding protein ECB94_13470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ECB94_13470 PF00460 Flagella basal body rod protein ECB94_13480 PF00691 OmpA family ECB94_13485 PF02049 Flagellar hook-basal body complex protein FliE ECB94_13490 PF01514 Secretory protein of YscJ/FliF family ECB94_13490 PF08345 Flagellar M-ring protein C-terminal ECB94_13495 PF14841 FliG middle domain ECB94_13495 PF14842 FliG N-terminal domain ECB94_13495 PF01706 FliG C-terminal domain ECB94_13520 PF01323 DSBA-like thioredoxin domain ECB94_13535 PF00771 FHIPEP family ECB94_13540 PF00669 Bacterial flagellin N-terminal helical region ECB94_13540 PF00700 Bacterial flagellin C-terminal helical region ECB94_13545 PF07196 Flagellin hook IN motif ECB94_13545 PF02465 Flagellar hook-associated protein 2 N-terminus ECB94_13545 PF07195 Flagellar hook-associated protein 2 C-terminus ECB94_13570 PF04545 Sigma-70, region 4 ECB94_13570 PF04542 Sigma-70 region 2 ECB94_13575 PF01618 MotA/TolQ/ExbB proton channel family ECB94_13580 PF00691 OmpA family ECB94_13580 PF13677 Membrane MotB of proton-channel complex MotA/MotB ECB94_13590 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ECB94_13595 PF00486 Transcriptional regulatory protein, C terminal ECB94_13595 PF00072 Response regulator receiver domain ECB94_13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_13600 PF00512 His Kinase A (phospho-acceptor) domain ECB94_13600 PF00672 HAMP domain ECB94_13605 PF01547 Bacterial extracellular solute-binding protein ECB94_13610 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_13615 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_13620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_13630 PF00072 Response regulator receiver domain ECB94_13630 PF02954 Bacterial regulatory protein, Fis family ECB94_13630 PF00158 Sigma-54 interaction domain ECB94_13635 PF02743 Cache domain ECB94_13635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_13635 PF00512 His Kinase A (phospho-acceptor) domain ECB94_13640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_13640 PF05698 Bacterial trigger factor protein (TF) C-terminus ECB94_13640 PF05697 Bacterial trigger factor protein (TF) ECB94_13645 PF00574 Clp protease ECB94_13650 PF10431 C-terminal, D2-small domain, of ClpB protein ECB94_13650 PF06689 ClpX C4-type zinc finger ECB94_13650 PF07724 AAA domain (Cdc48 subfamily) ECB94_13655 PF02190 ATP-dependent protease La (LON) substrate-binding domain ECB94_13655 PF05362 Lon protease (S16) C-terminal proteolytic domain ECB94_13655 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_13660 PF00216 Bacterial DNA-binding protein ECB94_13665 PF13145 PPIC-type PPIASE domain ECB94_13695 PF00155 Aminotransferase class I and II ECB94_13700 PF00425 chorismate binding enzyme ECB94_13710 PF12697 Alpha/beta hydrolase family ECB94_13715 PF00378 Enoyl-CoA hydratase/isomerase ECB94_13720 PF13378 Enolase C-terminal domain-like ECB94_13725 PF00501 AMP-binding enzyme ECB94_13725 PF13193 AMP-binding enzyme C-terminal domain ECB94_13735 PF03601 Conserved hypothetical protein 698 ECB94_13740 PF07690 Major Facilitator Superfamily ECB94_13790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_13795 PF00873 AcrB/AcrD/AcrF family ECB94_13805 PF17202 Single cache domain 3 ECB94_13805 PF00672 HAMP domain ECB94_13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_13810 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_13815 PF01037 Lrp/AsnC ligand binding domain ECB94_13815 PF13404 AsnC-type helix-turn-helix domain ECB94_13820 PF00465 Iron-containing alcohol dehydrogenase ECB94_13825 PF00171 Aldehyde dehydrogenase family ECB94_13835 PF09619 Type III secretion system lipoprotein chaperone (YscW) ECB94_13840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ECB94_13940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_13940 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_13945 PF00672 HAMP domain ECB94_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_13945 PF00512 His Kinase A (phospho-acceptor) domain ECB94_13950 PF00072 Response regulator receiver domain ECB94_13950 PF00486 Transcriptional regulatory protein, C terminal ECB94_13980 PF00873 AcrB/AcrD/AcrF family ECB94_13990 PF01042 Endoribonuclease L-PSP ECB94_13995 PF00282 Pyridoxal-dependent decarboxylase conserved domain ECB94_14000 PF06826 Predicted Permease Membrane Region ECB94_14005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_14005 PF00672 HAMP domain ECB94_14010 PF00271 Helicase conserved C-terminal domain ECB94_14010 PF00270 DEAD/DEAH box helicase ECB94_14045 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ECB94_14045 PF00175 Oxidoreductase NAD-binding domain ECB94_14050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ECB94_14050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ECB94_14060 PF00271 Helicase conserved C-terminal domain ECB94_14060 PF00270 DEAD/DEAH box helicase ECB94_14065 PF01554 MatE ECB94_14070 PF13378 Enolase C-terminal domain-like ECB94_14070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ECB94_14080 PF03466 LysR substrate binding domain ECB94_14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_14090 PF01219 Prokaryotic diacylglycerol kinase ECB94_14100 PF00990 Diguanylate cyclase, GGDEF domain ECB94_14100 PF17158 Membrane-associated sensor, integral membrane domain ECB94_14105 PF00356 Bacterial regulatory proteins, lacI family ECB94_14110 PF01266 FAD dependent oxidoreductase ECB94_14110 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ECB94_14115 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_14115 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_14120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ECB94_14120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_14120 PF11890 Domain of unknown function (DUF3410) ECB94_14125 PF01118 Semialdehyde dehydrogenase, NAD binding domain ECB94_14125 PF02774 Semialdehyde dehydrogenase, dimerisation domain ECB94_14140 PF01039 Carboxyl transferase domain ECB94_14140 PF17848 Acetyl-coA carboxylase zinc finger domain ECB94_14145 PF08245 Mur ligase middle domain ECB94_14145 PF02875 Mur ligase family, glutamate ligase domain ECB94_14150 PF05036 Sporulation related domain ECB94_14155 PF02674 Colicin V production protein ECB94_14160 PF00156 Phosphoribosyl transferase domain ECB94_14165 PF03466 LysR substrate binding domain ECB94_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_14175 PF00072 Response regulator receiver domain ECB94_14190 PF00156 Phosphoribosyl transferase domain ECB94_14195 PF12170 DNA polymerase III tau subunit V interacting with alpha ECB94_14195 PF12169 DNA polymerase III subunits gamma and tau domain III ECB94_14200 PF02575 YbaB/EbfC DNA-binding family ECB94_14205 PF13662 Toprim domain ECB94_14205 PF02132 RecR protein ECB94_14210 PF00230 Major intrinsic protein ECB94_14215 PF03692 Putative zinc- or iron-chelating domain ECB94_14225 PF00589 Phage integrase family ECB94_14225 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_14245 PF06892 Phage regulatory protein CII (CP76) ECB94_14295 PF05840 Bacteriophage replication gene A protein (GPA) ECB94_14445 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_14460 PF13847 Methyltransferase domain ECB94_14465 PF01263 Aldose 1-epimerase ECB94_14470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ECB94_14470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ECB94_14475 PF01641 SelR domain ECB94_14485 PF07023 Protein of unknown function (DUF1315) ECB94_14490 PF01740 STAS domain ECB94_14490 PF00916 Sulfate permease family ECB94_14495 PF12111 Polyribonucleotide phosphorylase C terminal ECB94_14495 PF00575 S1 RNA binding domain ECB94_14495 PF10150 Ribonuclease E/G family ECB94_14500 PF01479 S4 domain ECB94_14500 PF00849 RNA pseudouridylate synthase ECB94_14505 PF02545 Maf-like protein ECB94_14510 PF02620 Large ribosomal RNA subunit accumulation protein YceD ECB94_14520 PF02504 Fatty acid synthesis protein ECB94_14525 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ECB94_14525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ECB94_14530 PF00698 Acyl transferase domain ECB94_14540 PF00550 Phosphopantetheine attachment site ECB94_14545 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_14545 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_14550 PF01063 Amino-transferase class IV ECB94_14555 PF02618 YceG-like family ECB94_14560 PF02223 Thymidylate kinase ECB94_14565 PF09115 DNA polymerase III, delta subunit, C terminal ECB94_14570 PF01026 TatD related DNase ECB94_14575 PF00367 phosphotransferase system, EIIB ECB94_14575 PF02378 Phosphotransferase system, EIIC ECB94_14590 PF00209 Sodium:neurotransmitter symporter family ECB94_14605 PF01734 Patatin-like phospholipase ECB94_14610 PF00480 ROK family ECB94_14615 PF01584 CheW-like domain ECB94_14615 PF00072 Response regulator receiver domain ECB94_14620 PF07733 Bacterial DNA polymerase III alpha NTPase domain ECB94_14620 PF14579 Helix-hairpin-helix motif ECB94_14620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ECB94_14620 PF02811 PHP domain ECB94_14620 PF01336 OB-fold nucleic acid binding domain ECB94_14635 PF01734 Patatin-like phospholipase ECB94_14640 PF00106 short chain dehydrogenase ECB94_14645 PF01343 Peptidase family S49 ECB94_14645 PF08496 Peptidase family S49 N-terminal ECB94_14655 PF00575 S1 RNA binding domain ECB94_14665 PF06305 Lipopolysaccharide assembly protein A domain ECB94_14670 PF18073 Rubredoxin metal binding domain ECB94_14675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ECB94_14680 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ECB94_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_14690 PF03466 LysR substrate binding domain ECB94_14700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ECB94_14700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ECB94_14705 PF01037 Lrp/AsnC ligand binding domain ECB94_14710 PF17854 FtsK alpha domain ECB94_14710 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ECB94_14710 PF09397 Ftsk gamma domain ECB94_14710 PF01580 FtsK/SpoIIIE family ECB94_14715 PF03548 Outer membrane lipoprotein carrier protein LolA ECB94_14720 PF16193 AAA C-terminal domain ECB94_14720 PF00004 ATPase family associated with various cellular activities (AAA) ECB94_14720 PF12002 MgsA AAA+ ATPase C terminal ECB94_14725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECB94_14725 PF02403 Seryl-tRNA synthetase N-terminal domain ECB94_14730 PF01258 Prokaryotic dksA/traR C4-type zinc finger ECB94_14735 PF00202 Aminotransferase class-III ECB94_14740 PF04055 Radical SAM superfamily ECB94_14740 PF06968 Biotin and Thiamin Synthesis associated domain ECB94_14745 PF00155 Aminotransferase class I and II ECB94_14750 PF08241 Methyltransferase domain ECB94_14805 PF08328 Adenylosuccinate lyase C-terminal ECB94_14805 PF00206 Lyase ECB94_14810 PF04356 Protein of unknown function (DUF489) ECB94_14820 PF00294 pfkB family carbohydrate kinase ECB94_14825 PF00816 H-NS histone family ECB94_14830 PF03553 Na+/H+ antiporter family ECB94_14835 PF08029 HisG, C-terminal domain ECB94_14835 PF01634 ATP phosphoribosyltransferase ECB94_14840 PF00815 Histidinol dehydrogenase ECB94_14845 PF00155 Aminotransferase class I and II ECB94_14850 PF00475 Imidazoleglycerol-phosphate dehydratase ECB94_14850 PF08645 Polynucleotide kinase 3 phosphatase ECB94_14855 PF00117 Glutamine amidotransferase class-I ECB94_14860 PF00977 Histidine biosynthesis protein ECB94_14865 PF00977 Histidine biosynthesis protein ECB94_14870 PF01502 Phosphoribosyl-AMP cyclohydrolase ECB94_14870 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ECB94_14880 PF00535 Glycosyl transferase family 2 ECB94_14895 PF04293 SpoVR like protein ECB94_14900 PF04285 Protein of unknown function (DUF444) ECB94_14905 PF08298 PrkA AAA domain ECB94_14905 PF06798 PrkA serine protein kinase C-terminal domain ECB94_14915 PF04055 Radical SAM superfamily ECB94_14920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_14920 PF00672 HAMP domain ECB94_14920 PF02743 Cache domain ECB94_14930 PF02901 Pyruvate formate lyase-like ECB94_14930 PF01228 Glycine radical ECB94_14940 PF00005 ABC transporter ECB94_14945 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_14950 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_14955 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_14960 PF03372 Endonuclease/Exonuclease/phosphatase family ECB94_14965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_14965 PF00672 HAMP domain ECB94_14980 PF18030 RimK PreATP-grasp domain ECB94_14980 PF08443 RimK-like ATP-grasp domain ECB94_14990 PF13649 Methyltransferase domain ECB94_14995 PF01904 Protein of unknown function DUF72 ECB94_15000 PF00152 tRNA synthetases class II (D, K and N) ECB94_15000 PF01336 OB-fold nucleic acid binding domain ECB94_15000 PF02938 GAD domain ECB94_15005 PF01709 Transcriptional regulator ECB94_15010 PF02075 Crossover junction endodeoxyribonuclease RuvC ECB94_15015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_15015 PF17200 Single Cache domain 2 ECB94_15015 PF00672 HAMP domain ECB94_15020 PF07499 RuvA, C-terminal domain ECB94_15020 PF01330 RuvA N terminal domain ECB94_15025 PF05491 RuvB C-terminal winged helix domain ECB94_15025 PF05496 Holliday junction DNA helicase RuvB P-loop domain ECB94_15025 PF17864 RuvB AAA lid domain ECB94_15030 PF01654 Cytochrome bd terminal oxidase subunit I ECB94_15035 PF02322 Cytochrome bd terminal oxidase subunit II ECB94_15040 PF08173 Membrane bound YbgT-like protein ECB94_15050 PF03061 Thioesterase superfamily ECB94_15055 PF01618 MotA/TolQ/ExbB proton channel family ECB94_15060 PF02472 Biopolymer transport protein ExbD/TolR ECB94_15075 PF00691 OmpA family ECB94_15080 PF16331 TolA binding protein trimerisation ECB94_15080 PF13174 Tetratricopeptide repeat ECB94_15090 PF02445 Quinolinate synthetase A protein ECB94_15115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_15115 PF09308 LuxQ, periplasmic ECB94_15115 PF00512 His Kinase A (phospho-acceptor) domain ECB94_15115 PF00072 Response regulator receiver domain ECB94_15120 PF06610 L-alanine exporter ECB94_15130 PF14659 Phage integrase, N-terminal SAM-like domain ECB94_15130 PF00589 Phage integrase family ECB94_15130 PF13356 Arm DNA-binding domain ECB94_15160 PF02796 Helix-turn-helix domain of resolvase ECB94_15160 PF00239 Resolvase, N terminal domain ECB94_15165 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ECB94_15165 PF00271 Helicase conserved C-terminal domain ECB94_15165 PF04851 Type III restriction enzyme, res subunit ECB94_15165 PF08463 EcoEI R protein C-terminal ECB94_15170 PF02384 N-6 DNA Methylase ECB94_15175 PF01420 Type I restriction modification DNA specificity domain ECB94_15205 PF12102 Domain of unknown function (DUF3578) ECB94_15205 PF07728 AAA domain (dynein-related subfamily) ECB94_15225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECB94_15225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECB94_15230 PF00171 Aldehyde dehydrogenase family ECB94_15235 PF00005 ABC transporter ECB94_15235 PF08402 TOBE domain ECB94_15245 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15250 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15255 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) ECB94_15260 PF00356 Bacterial regulatory proteins, lacI family ECB94_15260 PF13407 Periplasmic binding protein domain ECB94_15265 PF03932 CutC family ECB94_15270 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_15275 PF01112 Asparaginase ECB94_15280 PF00005 ABC transporter ECB94_15285 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15290 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15295 PF12833 Helix-turn-helix domain ECB94_15295 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ECB94_15300 PF00171 Aldehyde dehydrogenase family ECB94_15305 PF00501 AMP-binding enzyme ECB94_15305 PF13193 AMP-binding enzyme C-terminal domain ECB94_15310 PF00732 GMC oxidoreductase ECB94_15310 PF05199 GMC oxidoreductase ECB94_15315 PF12697 Alpha/beta hydrolase family ECB94_15325 PF00512 His Kinase A (phospho-acceptor) domain ECB94_15325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_15325 PF02743 Cache domain ECB94_15330 PF00072 Response regulator receiver domain ECB94_15330 PF02954 Bacterial regulatory protein, Fis family ECB94_15330 PF00158 Sigma-54 interaction domain ECB94_15345 PF00005 ABC transporter ECB94_15350 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15355 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15365 PF00455 DeoR C terminal sensor domain ECB94_15365 PF08220 DeoR-like helix-turn-helix domain ECB94_15370 PF07690 Major Facilitator Superfamily ECB94_15375 PF02952 L-fucose isomerase, C-terminal domain ECB94_15375 PF07881 L-fucose isomerase, first N-terminal domain ECB94_15375 PF07882 L-fucose isomerase, second N-terminal domain ECB94_15380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ECB94_15380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ECB94_15385 PF05025 RbsD / FucU transport protein family ECB94_15390 PF00596 Class II Aldolase and Adducin N-terminal domain ECB94_15395 PF00465 Iron-containing alcohol dehydrogenase ECB94_15410 PF00171 Aldehyde dehydrogenase family ECB94_15420 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_15435 PF14502 Helix-turn-helix domain ECB94_15435 PF14503 YhfZ C-terminal domain ECB94_15440 PF02126 Phosphotriesterase family ECB94_15445 PF10941 Protein of unknown function DUF2620 ECB94_15450 PF10797 Protein of unknown function ECB94_15460 PF01168 Alanine racemase, N-terminal domain ECB94_15465 PF01676 Metalloenzyme superfamily ECB94_15470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ECB94_15475 PF09905 DNA-binding protein VF530 ECB94_15480 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ECB94_15485 PF13302 Acetyltransferase (GNAT) domain ECB94_15490 PF00356 Bacterial regulatory proteins, lacI family ECB94_15495 PF16875 Glycosyl hydrolase family 36 N-terminal domain ECB94_15495 PF16874 Glycosyl hydrolase family 36 C-terminal domain ECB94_15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_15510 PF03466 LysR substrate binding domain ECB94_15515 PF08267 Cobalamin-independent synthase, N-terminal domain ECB94_15515 PF01717 Cobalamin-independent synthase, Catalytic domain ECB94_15525 PF03795 YCII-related domain ECB94_15530 PF03061 Thioesterase superfamily ECB94_15535 PF04279 Intracellular septation protein A ECB94_15545 PF00375 Sodium:dicarboxylate symporter family ECB94_15555 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_15560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ECB94_15560 PF00218 Indole-3-glycerol phosphate synthase ECB94_15565 PF02885 Glycosyl transferase family, helical bundle domain ECB94_15565 PF00591 Glycosyl transferase family, a/b domain ECB94_15570 PF00117 Glutamine amidotransferase class-I ECB94_15575 PF00425 chorismate binding enzyme ECB94_15575 PF04715 Anthranilate synthase component I, N terminal region ECB94_15580 PF02811 PHP domain ECB94_15585 PF01300 Telomere recombination ECB94_15590 PF00849 RNA pseudouridylate synthase ECB94_15590 PF01479 S4 domain ECB94_15595 PF00005 ABC transporter ECB94_15600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_15600 PF00005 ABC transporter ECB94_15605 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_15605 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15610 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_15620 PF00158 Sigma-54 interaction domain ECB94_15620 PF02954 Bacterial regulatory protein, Fis family ECB94_15625 PF04012 PspA/IM30 family ECB94_15630 PF06667 Phage shock protein B ECB94_15640 PF03466 LysR substrate binding domain ECB94_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_15645 PF02056 Family 4 glycosyl hydrolase ECB94_15645 PF11975 Family 4 glycosyl hydrolase C-terminal domain ECB94_15650 PF04794 YdjC-like protein ECB94_15660 PF13533 Biotin-lipoyl like ECB94_15665 PF00873 AcrB/AcrD/AcrF family ECB94_15670 PF00117 Glutamine amidotransferase class-I ECB94_15670 PF00958 GMP synthase C terminal domain ECB94_15670 PF13302 Acetyltransferase (GNAT) domain ECB94_15670 PF13673 Acetyltransferase (GNAT) domain ECB94_15670 PF03352 Methyladenine glycosylase ECB94_15675 PF01557 Fumarylacetoacetate (FAA) hydrolase family ECB94_15690 PF00171 Aldehyde dehydrogenase family ECB94_15695 PF00465 Iron-containing alcohol dehydrogenase ECB94_15710 PF00884 Sulfatase ECB94_15715 PF04055 Radical SAM superfamily ECB94_15715 PF13186 Iron-sulfur cluster-binding domain ECB94_15730 PF00884 Sulfatase ECB94_15735 PF16925 Tetracyclin repressor-like, C-terminal domain ECB94_15735 PF00440 Bacterial regulatory proteins, tetR family ECB94_15740 PF00994 Probable molybdopterin binding domain ECB94_15755 PF04116 Fatty acid hydroxylase superfamily ECB94_15765 PF00313 'Cold-shock' DNA-binding domain ECB94_15770 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_15770 PF00970 Oxidoreductase FAD-binding domain ECB94_15770 PF00175 Oxidoreductase NAD-binding domain ECB94_15775 PF00268 Ribonucleotide reductase, small chain ECB94_15780 PF00317 Ribonucleotide reductase, all-alpha domain ECB94_15780 PF02867 Ribonucleotide reductase, barrel domain ECB94_15780 PF03477 ATP cone domain ECB94_15790 PF03989 DNA gyrase C-terminal domain, beta-propeller ECB94_15790 PF00521 DNA gyrase/topoisomerase IV, subunit A ECB94_15810 PF01053 Cys/Met metabolism PLP-dependent enzyme ECB94_15815 PF13396 Phospholipase_D-nuclease N-terminal ECB94_15815 PF13091 PLD-like domain ECB94_15820 PF00209 Sodium:neurotransmitter symporter family ECB94_15825 PF00849 RNA pseudouridylate synthase ECB94_15830 PF02926 THUMP domain ECB94_15830 PF01170 Putative RNA methylase family UPF0020 ECB94_15830 PF10672 S-adenosylmethionine-dependent methyltransferase ECB94_15840 PF06945 Protein of unknown function (DUF1289) ECB94_15845 PF00072 Response regulator receiver domain ECB94_15850 PF00990 Diguanylate cyclase, GGDEF domain ECB94_15850 PF05230 MASE2 domain ECB94_15865 PF00860 Permease family ECB94_15875 PF00005 ABC transporter ECB94_15875 PF17912 MalK OB fold domain ECB94_15880 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15885 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_15890 PF13416 Bacterial extracellular solute-binding protein ECB94_15895 PF03009 Glycerophosphoryl diester phosphodiesterase family ECB94_15900 PF08220 DeoR-like helix-turn-helix domain ECB94_15900 PF00455 DeoR C terminal sensor domain ECB94_15905 PF11849 Domain of unknown function (DUF3369) ECB94_15910 PF00294 pfkB family carbohydrate kinase ECB94_15915 PF04227 Indigoidine synthase A like protein ECB94_15930 PF02001 Protein of unknown function DUF134 ECB94_15940 PF00072 Response regulator receiver domain ECB94_15945 PF00672 HAMP domain ECB94_15945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_15945 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_15945 PF00512 His Kinase A (phospho-acceptor) domain ECB94_15945 PF01627 Hpt domain ECB94_15945 PF00072 Response regulator receiver domain ECB94_15950 PF13419 Haloacid dehalogenase-like hydrolase ECB94_15955 PF08220 DeoR-like helix-turn-helix domain ECB94_15955 PF00455 DeoR C terminal sensor domain ECB94_15960 PF01266 FAD dependent oxidoreductase ECB94_15965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_15965 PF03466 LysR substrate binding domain ECB94_15970 PF00561 alpha/beta hydrolase fold ECB94_15980 PF01980 tRNA-methyltransferase O ECB94_15995 PF07883 Cupin domain ECB94_15995 PF01381 Helix-turn-helix ECB94_16000 PF03594 Benzoate membrane transport protein ECB94_16005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ECB94_16005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ECB94_16010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ECB94_16010 PF01266 FAD dependent oxidoreductase ECB94_16025 PF18024 Helix-turn-helix domain ECB94_16025 PF00158 Sigma-54 interaction domain ECB94_16030 PF13302 Acetyltransferase (GNAT) domain ECB94_16045 PF00809 Pterin binding enzyme ECB94_16045 PF02607 B12 binding domain ECB94_16045 PF02310 B12 binding domain ECB94_16045 PF02574 Homocysteine S-methyltransferase ECB94_16045 PF02965 Vitamin B12 dependent methionine synthase, activation domain ECB94_16050 PF00939 Sodium:sulfate symporter transmembrane region ECB94_16055 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_16055 PF00512 His Kinase A (phospho-acceptor) domain ECB94_16065 PF00581 Rhodanese-like domain ECB94_16070 PF00361 Proton-conducting membrane transporter ECB94_16070 PF13244 Domain of unknown function (DUF4040) ECB94_16070 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ECB94_16070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ECB94_16090 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ECB94_16095 PF03334 Na+/H+ antiporter subunit ECB94_16105 PF04013 Putative SAM-dependent RNA methyltransferase ECB94_16120 PF05036 Sporulation related domain ECB94_16120 PF03330 Lytic transglycolase ECB94_16125 PF12464 Maltose acetyltransferase ECB94_16125 PF14602 Hexapeptide repeat of succinyl-transferase ECB94_16130 PF00356 Bacterial regulatory proteins, lacI family ECB94_16140 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_16145 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_16155 PF00149 Calcineurin-like phosphoesterase ECB94_16165 PF00106 short chain dehydrogenase ECB94_16175 PF00155 Aminotransferase class I and II ECB94_16180 PF01594 AI-2E family transporter ECB94_16190 PF13533 Biotin-lipoyl like ECB94_16225 PF00140 Sigma-70 factor, region 1.2 ECB94_16225 PF04542 Sigma-70 region 2 ECB94_16225 PF04539 Sigma-70 region 3 ECB94_16225 PF04545 Sigma-70, region 4 ECB94_16240 PF02654 Cobalamin-5-phosphate synthase ECB94_16245 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ECB94_16260 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ECB94_16265 PF01032 FecCD transport family ECB94_16280 PF01740 STAS domain ECB94_16280 PF00916 Sulfate permease family ECB94_16300 PF03466 LysR substrate binding domain ECB94_16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_16330 PF03466 LysR substrate binding domain ECB94_16345 PF00892 EamA-like transporter family ECB94_16350 PF01047 MarR family ECB94_16360 PF01274 Malate synthase ECB94_16365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ECB94_16365 PF00205 Thiamine pyrophosphate enzyme, central domain ECB94_16365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ECB94_16370 PF01261 Xylose isomerase-like TIM barrel ECB94_16375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ECB94_16375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_16400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_16405 PF01979 Amidohydrolase family ECB94_16410 PF00860 Permease family ECB94_16415 PF00860 Permease family ECB94_16420 PF00576 HIUase/Transthyretin family ECB94_16430 PF09349 OHCU decarboxylase ECB94_16430 PF01014 Uricase ECB94_16435 PF03561 Allantoicase repeat ECB94_16440 PF04115 Ureidoglycolate lyase ECB94_16455 PF00106 short chain dehydrogenase ECB94_16460 PF02311 AraC-like ligand binding domain ECB94_16460 PF12833 Helix-turn-helix domain ECB94_16495 PF03466 LysR substrate binding domain ECB94_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_16530 PF10415 Fumarase C C-terminus ECB94_16530 PF00206 Lyase ECB94_16535 PF00171 Aldehyde dehydrogenase family ECB94_16540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_16540 PF03466 LysR substrate binding domain ECB94_16545 PF00248 Aldo/keto reductase family ECB94_16550 PF00557 Metallopeptidase family M24 ECB94_16555 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_16560 PF01638 HxlR-like helix-turn-helix ECB94_16570 PF01323 DSBA-like thioredoxin domain ECB94_16600 PF00561 alpha/beta hydrolase fold ECB94_16625 PF02558 Ketopantoate reductase PanE/ApbA ECB94_16625 PF08546 Ketopantoate reductase PanE/ApbA C terminal ECB94_16640 PF01979 Amidohydrolase family ECB94_16650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECB94_16650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ECB94_16655 PF00941 FAD binding domain in molybdopterin dehydrogenase ECB94_16655 PF03450 CO dehydrogenase flavoprotein C-terminal domain ECB94_16660 PF07729 FCD domain ECB94_16660 PF00392 Bacterial regulatory proteins, gntR family ECB94_16665 PF03741 Integral membrane protein TerC family ECB94_16675 PF01144 Coenzyme A transferase ECB94_16680 PF01144 Coenzyme A transferase ECB94_16685 PF00108 Thiolase, N-terminal domain ECB94_16685 PF02803 Thiolase, C-terminal domain ECB94_16690 PF01261 Xylose isomerase-like TIM barrel ECB94_16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_16700 PF03466 LysR substrate binding domain ECB94_16705 PF00083 Sugar (and other) transporter ECB94_16710 PF01261 Xylose isomerase-like TIM barrel ECB94_16715 PF00205 Thiamine pyrophosphate enzyme, central domain ECB94_16715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ECB94_16715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ECB94_16720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ECB94_16720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ECB94_16725 PF00294 pfkB family carbohydrate kinase ECB94_16735 PF01116 Fructose-bisphosphate aldolase class-II ECB94_16745 PF01261 Xylose isomerase-like TIM barrel ECB94_16750 PF04962 KduI/IolB family ECB94_16755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ECB94_16755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ECB94_16765 PF02653 Branched-chain amino acid transport system / permease component ECB94_16770 PF00005 ABC transporter ECB94_16775 PF13407 Periplasmic binding protein domain ECB94_16780 PF00294 pfkB family carbohydrate kinase ECB94_16785 PF00171 Aldehyde dehydrogenase family ECB94_16800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_16800 PF01842 ACT domain ECB94_16800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ECB94_16815 PF00664 ABC transporter transmembrane region ECB94_16815 PF00005 ABC transporter ECB94_16820 PF00529 HlyD membrane-fusion protein of T1SS ECB94_16820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_16840 PF13426 PAS domain ECB94_16840 PF07228 Stage II sporulation protein E (SpoIIE) ECB94_16845 PF01740 STAS domain ECB94_16850 PF00483 Nucleotidyl transferase ECB94_16860 PF16353 Domain of unknown function(DUF4981) ECB94_16860 PF00703 Glycosyl hydrolases family 2 ECB94_16860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ECB94_16860 PF02929 Beta galactosidase small chain ECB94_16860 PF02837 Glycosyl hydrolases family 2, sugar binding domain ECB94_16895 PF03129 Anticodon binding domain ECB94_16895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ECB94_16895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ECB94_16895 PF02824 TGS domain ECB94_16900 PF05198 Translation initiation factor IF-3, N-terminal domain ECB94_16900 PF00707 Translation initiation factor IF-3, C-terminal domain ECB94_16905 PF01632 Ribosomal protein L35 ECB94_16915 PF13495 Phage integrase, N-terminal SAM-like domain ECB94_16915 PF00589 Phage integrase family ECB94_16960 PF01548 Transposase ECB94_16960 PF02371 Transposase IS116/IS110/IS902 family ECB94_17015 PF07237 Protein of unknown function (DUF1428) ECB94_17140 PF00664 ABC transporter transmembrane region ECB94_17140 PF00005 ABC transporter ECB94_17160 PF00672 HAMP domain ECB94_17160 PF01627 Hpt domain ECB94_17160 PF00512 His Kinase A (phospho-acceptor) domain ECB94_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_17160 PF00072 Response regulator receiver domain ECB94_17160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_17170 PF00106 short chain dehydrogenase ECB94_17175 PF02803 Thiolase, C-terminal domain ECB94_17175 PF00108 Thiolase, N-terminal domain ECB94_17185 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ECB94_17195 PF00375 Sodium:dicarboxylate symporter family ECB94_17210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_17225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_17225 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ECB94_17225 PF17203 Single cache domain 3 ECB94_17225 PF00989 PAS fold ECB94_17230 PF00072 Response regulator receiver domain ECB94_17235 PF07963 Prokaryotic N-terminal methylation motif ECB94_17235 PF08334 Type II secretion system (T2SS), protein G ECB94_17240 PF01970 Tripartite tricarboxylate transporter TctA family ECB94_17255 PF07729 FCD domain ECB94_17255 PF00392 Bacterial regulatory proteins, gntR family ECB94_17265 PF00285 Citrate synthase, C-terminal domain ECB94_17270 PF00330 Aconitase family (aconitate hydratase) ECB94_17270 PF00694 Aconitase C-terminal domain ECB94_17275 PF04303 PrpF protein ECB94_17280 PF16177 Acetyl-coenzyme A synthetase N-terminus ECB94_17280 PF13193 AMP-binding enzyme C-terminal domain ECB94_17280 PF00501 AMP-binding enzyme ECB94_17300 PF01235 Sodium:alanine symporter family ECB94_17330 PF01554 MatE ECB94_17340 PF02222 ATP-grasp domain ECB94_17345 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ECB94_17345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ECB94_17350 PF04172 LrgB-like family ECB94_17355 PF03788 LrgA family ECB94_17360 PF08411 Exonuclease C-terminal ECB94_17360 PF00929 Exonuclease ECB94_17385 PF00583 Acetyltransferase (GNAT) family ECB94_17395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_17400 PF02567 Phenazine biosynthesis-like protein ECB94_17435 PF12833 Helix-turn-helix domain ECB94_17440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_17440 PF00529 HlyD membrane-fusion protein of T1SS ECB94_17450 PF01594 AI-2E family transporter ECB94_17455 PF13396 Phospholipase_D-nuclease N-terminal ECB94_17455 PF13091 PLD-like domain ECB94_17465 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ECB94_17465 PF12833 Helix-turn-helix domain ECB94_17485 PF00012 Hsp70 protein ECB94_17490 PF00012 Hsp70 protein ECB94_17500 PF00990 Diguanylate cyclase, GGDEF domain ECB94_17500 PF17158 Membrane-associated sensor, integral membrane domain ECB94_17530 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ECB94_17530 PF04408 Helicase associated domain (HA2) ECB94_17530 PF00270 DEAD/DEAH box helicase ECB94_17530 PF00271 Helicase conserved C-terminal domain ECB94_17530 PF11898 Domain of unknown function (DUF3418) ECB94_17540 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ECB94_17560 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ECB94_17565 PF01810 LysE type translocator ECB94_17575 PF03453 MoeA N-terminal region (domain I and II) ECB94_17575 PF03454 MoeA C-terminal region (domain IV) ECB94_17575 PF00994 Probable molybdopterin binding domain ECB94_17585 PF00005 ABC transporter ECB94_17585 PF08402 TOBE domain ECB94_17590 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_17595 PF12849 PBP superfamily domain ECB94_17600 PF02954 Bacterial regulatory protein, Fis family ECB94_17600 PF00072 Response regulator receiver domain ECB94_17600 PF00158 Sigma-54 interaction domain ECB94_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_17605 PF00989 PAS fold ECB94_17605 PF00512 His Kinase A (phospho-acceptor) domain ECB94_17630 PF13460 NAD(P)H-binding ECB94_17635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_17635 PF03466 LysR substrate binding domain ECB94_17640 PF14310 Fibronectin type III-like domain ECB94_17640 PF00933 Glycosyl hydrolase family 3 N terminal domain ECB94_17640 PF01915 Glycosyl hydrolase family 3 C-terminal domain ECB94_17645 PF00005 ABC transporter ECB94_17645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_17650 PF00005 ABC transporter ECB94_17650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_17655 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_17655 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_17660 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_17665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_17670 PF00664 ABC transporter transmembrane region ECB94_17670 PF00005 ABC transporter ECB94_17690 PF08534 Redoxin ECB94_17695 PF02630 SCO1/SenC ECB94_17710 PF03264 NapC/NirT cytochrome c family, N-terminal region ECB94_17725 PF03466 LysR substrate binding domain ECB94_17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_17735 PF13409 Glutathione S-transferase, N-terminal domain ECB94_17740 PF13409 Glutathione S-transferase, N-terminal domain ECB94_17745 PF07681 DoxX ECB94_17750 PF03466 LysR substrate binding domain ECB94_17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_17765 PF00704 Glycosyl hydrolases family 18 ECB94_17770 PF01037 Lrp/AsnC ligand binding domain ECB94_17770 PF13404 AsnC-type helix-turn-helix domain ECB94_17785 PF00005 ABC transporter ECB94_17790 PF00155 Aminotransferase class I and II ECB94_17790 PF00392 Bacterial regulatory proteins, gntR family ECB94_17800 PF01161 Phosphatidylethanolamine-binding protein ECB94_17810 PF02635 DsrE/DsrF-like family ECB94_17845 PF12793 Sugar transport-related sRNA regulator N-term ECB94_17845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_17850 PF00232 Glycosyl hydrolase family 1 ECB94_17855 PF09264 Vibrio cholerae sialidase, lectin insertion ECB94_17855 PF13088 BNR repeat-like domain ECB94_17860 PF00356 Bacterial regulatory proteins, lacI family ECB94_17865 PF00356 Bacterial regulatory proteins, lacI family ECB94_17870 PF00232 Glycosyl hydrolase family 1 ECB94_17885 PF17912 MalK OB fold domain ECB94_17885 PF00005 ABC transporter ECB94_17885 PF03459 TOBE domain ECB94_17890 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_17895 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_17900 PF02927 Cellulase N-terminal ig-like domain ECB94_17900 PF00759 Glycosyl hydrolase family 9 ECB94_17905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ECB94_17905 PF00356 Bacterial regulatory proteins, lacI family ECB94_17910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_17910 PF00381 PTS HPr component phosphorylation site ECB94_17915 PF00294 pfkB family carbohydrate kinase ECB94_17920 PF02378 Phosphotransferase system, EIIC ECB94_17920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_17940 PF08669 Glycine cleavage T-protein C-terminal barrel domain ECB94_17940 PF01571 Aminomethyltransferase folate-binding domain ECB94_17950 PF00464 Serine hydroxymethyltransferase ECB94_17960 PF02347 Glycine cleavage system P-protein ECB94_17970 PF08534 Redoxin ECB94_17990 PF00356 Bacterial regulatory proteins, lacI family ECB94_18000 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_18000 PF00175 Oxidoreductase NAD-binding domain ECB94_18000 PF00970 Oxidoreductase FAD-binding domain ECB94_18005 PF01039 Carboxyl transferase domain ECB94_18005 PF17848 Acetyl-coA carboxylase zinc finger domain ECB94_18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18010 PF03466 LysR substrate binding domain ECB94_18020 PF02687 FtsX-like permease family ECB94_18020 PF00005 ABC transporter ECB94_18020 PF12704 MacB-like periplasmic core domain ECB94_18025 PF02687 FtsX-like permease family ECB94_18025 PF00005 ABC transporter ECB94_18025 PF12704 MacB-like periplasmic core domain ECB94_18030 PF12704 MacB-like periplasmic core domain ECB94_18030 PF02687 FtsX-like permease family ECB94_18045 PF00270 DEAD/DEAH box helicase ECB94_18045 PF00271 Helicase conserved C-terminal domain ECB94_18050 PF00860 Permease family ECB94_18065 PF07702 UTRA domain ECB94_18065 PF00392 Bacterial regulatory proteins, gntR family ECB94_18070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ECB94_18070 PF13378 Enolase C-terminal domain-like ECB94_18075 PF00367 phosphotransferase system, EIIB ECB94_18075 PF02378 Phosphotransferase system, EIIC ECB94_18080 PF03466 LysR substrate binding domain ECB94_18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18085 PF08803 Putative mono-oxygenase ydhR ECB94_18100 PF11742 Protein of unknown function (DUF3302) ECB94_18105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_18105 PF00529 HlyD membrane-fusion protein of T1SS ECB94_18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18115 PF03466 LysR substrate binding domain ECB94_18145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ECB94_18150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_18155 PF00141 Peroxidase ECB94_18165 PF05175 Methyltransferase small domain ECB94_18170 PF12833 Helix-turn-helix domain ECB94_18170 PF02311 AraC-like ligand binding domain ECB94_18175 PF00580 UvrD/REP helicase N-terminal domain ECB94_18175 PF13361 UvrD-like helicase C-terminal domain ECB94_18180 PF01645 Conserved region in glutamate synthase ECB94_18180 PF13187 4Fe-4S dicluster domain ECB94_18185 PF00392 Bacterial regulatory proteins, gntR family ECB94_18185 PF07702 UTRA domain ECB94_18190 PF00232 Glycosyl hydrolase family 1 ECB94_18195 PF00072 Response regulator receiver domain ECB94_18195 PF00196 Bacterial regulatory proteins, luxR family ECB94_18200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ECB94_18200 PF07730 Histidine kinase ECB94_18200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_18200 PF00672 HAMP domain ECB94_18215 PF01568 Molydopterin dinucleotide binding domain ECB94_18215 PF00384 Molybdopterin oxidoreductase ECB94_18215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ECB94_18220 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ECB94_18225 PF03264 NapC/NirT cytochrome c family, N-terminal region ECB94_18235 PF01966 HD domain ECB94_18240 PF02355 Protein export membrane protein ECB94_18240 PF07549 SecD/SecF GG Motif ECB94_18245 PF02355 Protein export membrane protein ECB94_18245 PF07549 SecD/SecF GG Motif ECB94_18245 PF13721 SecD export protein N-terminal TM region ECB94_18270 PF00360 Phytochrome region ECB94_18270 PF00990 Diguanylate cyclase, GGDEF domain ECB94_18270 PF01590 GAF domain ECB94_18270 PF00563 EAL domain ECB94_18305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_18310 PF00246 Zinc carboxypeptidase ECB94_18325 PF11412 Disulphide bond corrector protein DsbC ECB94_18325 PF02683 Cytochrome C biogenesis protein transmembrane region ECB94_18325 PF00085 Thioredoxin ECB94_18330 PF00578 AhpC/TSA family ECB94_18335 PF13462 Thioredoxin ECB94_18335 PF06965 Na+/H+ antiporter 1 ECB94_18340 PF03466 LysR substrate binding domain ECB94_18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18345 PF01554 MatE ECB94_18350 PF03831 PhnA domain ECB94_18350 PF08274 PhnA Zinc-Ribbon ECB94_18355 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ECB94_18365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_18370 PF01243 Pyridoxamine 5'-phosphate oxidase ECB94_18375 PF06228 Haem utilisation ChuX/HutX ECB94_18380 PF04055 Radical SAM superfamily ECB94_18385 PF03544 Gram-negative bacterial TonB protein C-terminal ECB94_18390 PF01618 MotA/TolQ/ExbB proton channel family ECB94_18395 PF02472 Biopolymer transport protein ExbD/TolR ECB94_18405 PF01032 FecCD transport family ECB94_18410 PF00005 ABC transporter ECB94_18445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18445 PF03466 LysR substrate binding domain ECB94_18450 PF02652 L-lactate permease ECB94_18455 PF02754 Cysteine-rich domain ECB94_18460 PF11870 Domain of unknown function (DUF3390) ECB94_18460 PF02589 LUD domain ECB94_18460 PF13183 4Fe-4S dicluster domain ECB94_18465 PF02589 LUD domain ECB94_18475 PF00990 Diguanylate cyclase, GGDEF domain ECB94_18485 PF03411 Penicillin-insensitive murein endopeptidase ECB94_18490 PF00962 Adenosine/AMP deaminase ECB94_18495 PF00232 Glycosyl hydrolase family 1 ECB94_18500 PF00480 ROK family ECB94_18505 PF00480 ROK family ECB94_18510 PF05726 Pirin C-terminal cupin domain ECB94_18510 PF02678 Pirin ECB94_18520 PF03109 ABC1 family ECB94_18530 PF01569 PAP2 superfamily ECB94_18540 PF00512 His Kinase A (phospho-acceptor) domain ECB94_18540 PF09308 LuxQ, periplasmic ECB94_18540 PF00072 Response regulator receiver domain ECB94_18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_18545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_18545 PF00672 HAMP domain ECB94_18545 PF17200 Single Cache domain 2 ECB94_18565 PF01497 Periplasmic binding protein ECB94_18570 PF01032 FecCD transport family ECB94_18575 PF01032 FecCD transport family ECB94_18580 PF00005 ABC transporter ECB94_18590 PF00962 Adenosine/AMP deaminase ECB94_18615 PF12706 Beta-lactamase superfamily domain ECB94_18625 PF00005 ABC transporter ECB94_18630 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_18635 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_18640 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_18655 PF16884 N-terminal domain of oxidoreductase ECB94_18655 PF00107 Zinc-binding dehydrogenase ECB94_18660 PF00440 Bacterial regulatory proteins, tetR family ECB94_18660 PF16925 Tetracyclin repressor-like, C-terminal domain ECB94_18675 PF01042 Endoribonuclease L-PSP ECB94_18685 PF00107 Zinc-binding dehydrogenase ECB94_18685 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_18685 PF00698 Acyl transferase domain ECB94_18685 PF08659 KR domain ECB94_18685 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_18685 PF16197 Ketoacyl-synthetase C-terminal extension ECB94_18685 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_18685 PF14765 Polyketide synthase dehydratase ECB94_18685 PF00550 Phosphopantetheine attachment site ECB94_18690 PF07690 Major Facilitator Superfamily ECB94_18695 PF02733 Dak1 domain ECB94_18695 PF02734 DAK2 domain ECB94_18700 PF02733 Dak1 domain ECB94_18705 PF02734 DAK2 domain ECB94_18710 PF00989 PAS fold ECB94_18710 PF00158 Sigma-54 interaction domain ECB94_18710 PF02954 Bacterial regulatory protein, Fis family ECB94_18715 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_18725 PF02492 CobW/HypB/UreG, nucleotide-binding domain ECB94_18730 PF01730 UreF ECB94_18740 PF02814 UreE urease accessory protein, N-terminal domain ECB94_18740 PF05194 UreE urease accessory protein, C-terminal domain ECB94_18745 PF01979 Amidohydrolase family ECB94_18745 PF00449 Urease alpha-subunit, N-terminal domain ECB94_18750 PF00699 Urease beta subunit ECB94_18755 PF00547 Urease, gamma subunit ECB94_18760 PF01774 UreD urease accessory protein ECB94_18765 PF00005 ABC transporter ECB94_18770 PF12399 Branched-chain amino acid ATP-binding cassette transporter ECB94_18770 PF00005 ABC transporter ECB94_18780 PF02653 Branched-chain amino acid transport system / permease component ECB94_18790 PF01554 MatE ECB94_18800 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_18820 PF03279 Bacterial lipid A biosynthesis acyltransferase ECB94_18850 PF00072 Response regulator receiver domain ECB94_18850 PF00196 Bacterial regulatory proteins, luxR family ECB94_18855 PF00563 EAL domain ECB94_18855 PF00990 Diguanylate cyclase, GGDEF domain ECB94_18855 PF08448 PAS fold ECB94_18860 PF09456 RcsC Alpha-Beta-Loop (ABL) ECB94_18860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_18860 PF00072 Response regulator receiver domain ECB94_18860 PF00512 His Kinase A (phospho-acceptor) domain ECB94_18870 PF16970 Type-1 fimbrial protein, A ECB94_18875 PF13953 PapC C-terminal domain ECB94_18875 PF13954 PapC N-terminal domain ECB94_18875 PF00577 Outer membrane usher protein ECB94_18880 PF02753 Pili assembly chaperone PapD, C-terminal domain ECB94_18880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ECB94_18900 PF16458 Beta-prism lectin ECB94_18900 PF07968 Leukocidin/Hemolysin toxin family ECB94_18900 PF12563 Hemolytic toxin N terminal ECB94_18920 PF01467 Cytidylyltransferase-like ECB94_18925 PF02540 NAD synthase ECB94_18935 PF03473 MOSC domain ECB94_18935 PF03476 MOSC N-terminal beta barrel domain ECB94_18935 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_18970 PF03466 LysR substrate binding domain ECB94_18970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_18975 PF00367 phosphotransferase system, EIIB ECB94_18975 PF02378 Phosphotransferase system, EIIC ECB94_18975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ECB94_18980 PF00465 Iron-containing alcohol dehydrogenase ECB94_18985 PF12833 Helix-turn-helix domain ECB94_19000 PF00873 AcrB/AcrD/AcrF family ECB94_19005 PF13533 Biotin-lipoyl like ECB94_19010 PF01329 Pterin 4 alpha carbinolamine dehydratase ECB94_19015 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ECB94_19020 PF13193 AMP-binding enzyme C-terminal domain ECB94_19020 PF00501 AMP-binding enzyme ECB94_19025 PF07859 alpha/beta hydrolase fold ECB94_19030 PF00924 Mechanosensitive ion channel ECB94_19035 PF03466 LysR substrate binding domain ECB94_19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_19040 PF01699 Sodium/calcium exchanger protein ECB94_19045 PF01769 Divalent cation transporter ECB94_19045 PF00571 CBS domain ECB94_19045 PF03448 MgtE intracellular N domain ECB94_19050 PF01914 MarC family integral membrane protein ECB94_19065 PF00535 Glycosyl transferase family 2 ECB94_19070 PF09335 SNARE associated Golgi protein ECB94_19115 PF00701 Dihydrodipicolinate synthetase family ECB94_19120 PF00920 Dehydratase family ECB94_19125 PF13378 Enolase C-terminal domain-like ECB94_19125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ECB94_19130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_19140 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_19145 PF01081 KDPG and KHG aldolase ECB94_19150 PF05035 2-keto-3-deoxy-galactonokinase ECB94_19155 PF07729 FCD domain ECB94_19155 PF00392 Bacterial regulatory proteins, gntR family ECB94_19175 PF06942 GlpM protein ECB94_19185 PF00356 Bacterial regulatory proteins, lacI family ECB94_19195 PF00005 ABC transporter ECB94_19195 PF17912 MalK OB fold domain ECB94_19200 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19205 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19215 PF00128 Alpha amylase, catalytic domain ECB94_19220 PF00534 Glycosyl transferases group 1 ECB94_19225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_19225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_19225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_19225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_19230 PF08402 TOBE domain ECB94_19230 PF00005 ABC transporter ECB94_19235 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19240 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19250 PF00480 ROK family ECB94_19260 PF00534 Glycosyl transferases group 1 ECB94_19270 PF00005 ABC transporter ECB94_19275 PF01032 FecCD transport family ECB94_19280 PF01032 FecCD transport family ECB94_19285 PF01497 Periplasmic binding protein ECB94_19290 PF00392 Bacterial regulatory proteins, gntR family ECB94_19290 PF07702 UTRA domain ECB94_19295 PF05661 Protein of unknown function (DUF808) ECB94_19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_19310 PF03466 LysR substrate binding domain ECB94_19315 PF07690 Major Facilitator Superfamily ECB94_19325 PF07690 Major Facilitator Superfamily ECB94_19335 PF12848 ABC transporter ECB94_19335 PF00005 ABC transporter ECB94_19340 PF00155 Aminotransferase class I and II ECB94_19345 PF04542 Sigma-70 region 2 ECB94_19345 PF08281 Sigma-70, region 4 ECB94_19365 PF04225 Opacity-associated protein A LysM-like domain ECB94_19365 PF01551 Peptidase family M23 ECB94_19395 PF08244 Glycosyl hydrolases family 32 C terminal ECB94_19395 PF00251 Glycosyl hydrolases family 32 N-terminal domain ECB94_19400 PF00367 phosphotransferase system, EIIB ECB94_19400 PF02378 Phosphotransferase system, EIIC ECB94_19405 PF07702 UTRA domain ECB94_19405 PF00392 Bacterial regulatory proteins, gntR family ECB94_19410 PF00356 Bacterial regulatory proteins, lacI family ECB94_19410 PF13407 Periplasmic binding protein domain ECB94_19415 PF00294 pfkB family carbohydrate kinase ECB94_19425 PF01238 Phosphomannose isomerase type I ECB94_19430 PF00202 Aminotransferase class-III ECB94_19435 PF00171 Aldehyde dehydrogenase family ECB94_19440 PF04371 Porphyromonas-type peptidyl-arginine deiminase ECB94_19445 PF00795 Carbon-nitrogen hydrolase ECB94_19450 PF01266 FAD dependent oxidoreductase ECB94_19455 PF00171 Aldehyde dehydrogenase family ECB94_19460 PF07883 Cupin domain ECB94_19460 PF01381 Helix-turn-helix ECB94_19465 PF07722 Peptidase C26 ECB94_19470 PF00120 Glutamine synthetase, catalytic domain ECB94_19475 PF03553 Na+/H+ antiporter family ECB94_19480 PF00141 Peroxidase ECB94_19495 PF00583 Acetyltransferase (GNAT) family ECB94_19500 PF01470 Pyroglutamyl peptidase ECB94_19510 PF07715 TonB-dependent Receptor Plug Domain ECB94_19510 PF00593 TonB dependent receptor ECB94_19515 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ECB94_19520 PF04183 IucA / IucC family ECB94_19520 PF06276 Ferric iron reductase FhuF-like transporter ECB94_19530 PF06276 Ferric iron reductase FhuF-like transporter ECB94_19530 PF04183 IucA / IucC family ECB94_19535 PF01032 FecCD transport family ECB94_19540 PF01497 Periplasmic binding protein ECB94_19545 PF00005 ABC transporter ECB94_19555 PF00194 Eukaryotic-type carbonic anhydrase ECB94_19565 PF08450 SMP-30/Gluconolactonase/LRE-like region ECB94_19570 PF00924 Mechanosensitive ion channel ECB94_19585 PF00465 Iron-containing alcohol dehydrogenase ECB94_19595 PF08281 Sigma-70, region 4 ECB94_19595 PF04542 Sigma-70 region 2 ECB94_19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_19615 PF03466 LysR substrate binding domain ECB94_19620 PF01047 MarR family ECB94_19625 PF02566 OsmC-like protein ECB94_19630 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ECB94_19635 PF16124 RecQ zinc-binding ECB94_19635 PF09382 RQC domain ECB94_19635 PF00570 HRDC domain ECB94_19635 PF00271 Helicase conserved C-terminal domain ECB94_19635 PF00270 DEAD/DEAH box helicase ECB94_19640 PF01274 Malate synthase ECB94_19645 PF03466 LysR substrate binding domain ECB94_19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_19650 PF00463 Isocitrate lyase family ECB94_19665 PF10952 Protein of unknown function (DUF2753) ECB94_19670 PF01197 Ribosomal protein L31 ECB94_19675 PF00444 Ribosomal protein L36 ECB94_19680 PF01979 Amidohydrolase family ECB94_19695 PF04851 Type III restriction enzyme, res subunit ECB94_19695 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ECB94_19695 PF00271 Helicase conserved C-terminal domain ECB94_19695 PF08463 EcoEI R protein C-terminal ECB94_19700 PF01420 Type I restriction modification DNA specificity domain ECB94_19705 PF12161 HsdM N-terminal domain ECB94_19705 PF02384 N-6 DNA Methylase ECB94_19715 PF15978 Tn7-like transposition protein D ECB94_19715 PF06527 TniQ ECB94_19720 PF13401 AAA domain ECB94_19720 PF11426 Tn7 transposition regulator TnsC ECB94_19725 PF00665 Integrase core domain ECB94_19730 PF08721 TnsA endonuclease C terminal ECB94_19730 PF08722 TnsA endonuclease N terminal ECB94_19735 PF01380 SIS domain ECB94_19740 PF08220 DeoR-like helix-turn-helix domain ECB94_19740 PF00455 DeoR C terminal sensor domain ECB94_19745 PF05068 Mannitol repressor ECB94_19750 PF01232 Mannitol dehydrogenase Rossmann domain ECB94_19750 PF08125 Mannitol dehydrogenase C-terminal domain ECB94_19755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_19755 PF02378 Phosphotransferase system, EIIC ECB94_19755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_19760 PF13419 Haloacid dehalogenase-like hydrolase ECB94_19765 PF12706 Beta-lactamase superfamily domain ECB94_19770 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ECB94_19770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_19780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_19780 PF03466 LysR substrate binding domain ECB94_19790 PF00892 EamA-like transporter family ECB94_19800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_19800 PF12793 Sugar transport-related sRNA regulator N-term ECB94_19810 PF00106 short chain dehydrogenase ECB94_19825 PF03786 D-mannonate dehydratase (UxuA) ECB94_19830 PF00392 Bacterial regulatory proteins, gntR family ECB94_19830 PF07729 FCD domain ECB94_19835 PF02837 Glycosyl hydrolases family 2, sugar binding domain ECB94_19835 PF00703 Glycosyl hydrolases family 2 ECB94_19835 PF02929 Beta galactosidase small chain ECB94_19835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ECB94_19840 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_19845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_19850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_19855 PF16338 Domain of unknown function (DUF4968) ECB94_19855 PF01055 Glycosyl hydrolases family 31 ECB94_19855 PF13802 Galactose mutarotase-like ECB94_19855 PF17137 Domain of unknown function (DUF5110) ECB94_19860 PF08125 Mannitol dehydrogenase C-terminal domain ECB94_19860 PF01232 Mannitol dehydrogenase Rossmann domain ECB94_19865 PF02614 Glucuronate isomerase ECB94_19870 PF00294 pfkB family carbohydrate kinase ECB94_19875 PF01081 KDPG and KHG aldolase ECB94_19885 PF10688 Bacterial inner membrane protein ECB94_19890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_19890 PF17200 Single Cache domain 2 ECB94_19890 PF00672 HAMP domain ECB94_19905 PF00196 Bacterial regulatory proteins, luxR family ECB94_19905 PF00072 Response regulator receiver domain ECB94_19910 PF03459 TOBE domain ECB94_19910 PF17912 MalK OB fold domain ECB94_19910 PF00005 ABC transporter ECB94_19915 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19920 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_19925 PF01547 Bacterial extracellular solute-binding protein ECB94_19930 PF00356 Bacterial regulatory proteins, lacI family ECB94_19940 PF02863 Arginine repressor, C-terminal domain ECB94_19940 PF01316 Arginine repressor, DNA binding domain ECB94_19945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECB94_19945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECB94_19950 PF00696 Amino acid kinase family ECB94_19960 PF03606 C4-dicarboxylate anaerobic carrier ECB94_19980 PF01966 HD domain ECB94_19985 PF02567 Phenazine biosynthesis-like protein ECB94_20000 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ECB94_20005 PF00875 DNA photolyase ECB94_20005 PF03441 FAD binding domain of DNA photolyase ECB94_20010 PF03116 NQR2, RnfD, RnfE family ECB94_20015 PF00990 Diguanylate cyclase, GGDEF domain ECB94_20020 PF00072 Response regulator receiver domain ECB94_20025 PF00072 Response regulator receiver domain ECB94_20040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ECB94_20040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ECB94_20045 PF06029 AlkA N-terminal domain ECB94_20045 PF00730 HhH-GPD superfamily base excision DNA repair protein ECB94_20055 PF00990 Diguanylate cyclase, GGDEF domain ECB94_20055 PF17158 Membrane-associated sensor, integral membrane domain ECB94_20065 PF00474 Sodium:solute symporter family ECB94_20070 PF06178 Oligogalacturonate-specific porin protein (KdgM) ECB94_20075 PF07733 Bacterial DNA polymerase III alpha NTPase domain ECB94_20075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ECB94_20075 PF14579 Helix-hairpin-helix motif ECB94_20075 PF02811 PHP domain ECB94_20075 PF00929 Exonuclease ECB94_20080 PF00571 CBS domain ECB94_20085 PF00392 Bacterial regulatory proteins, gntR family ECB94_20085 PF07729 FCD domain ECB94_20090 PF07729 FCD domain ECB94_20090 PF00392 Bacterial regulatory proteins, gntR family ECB94_20100 PF13977 BetI-type transcriptional repressor, C-terminal ECB94_20100 PF00440 Bacterial regulatory proteins, tetR family ECB94_20105 PF00171 Aldehyde dehydrogenase family ECB94_20110 PF00732 GMC oxidoreductase ECB94_20110 PF05199 GMC oxidoreductase ECB94_20115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ECB94_20120 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_20125 PF00571 CBS domain ECB94_20125 PF00005 ABC transporter ECB94_20130 PF00672 HAMP domain ECB94_20130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_20140 PF05426 Alginate lyase ECB94_20140 PF07940 Heparinase II/III-like protein ECB94_20145 PF05426 Alginate lyase ECB94_20145 PF07940 Heparinase II/III-like protein ECB94_20150 PF07883 Cupin domain ECB94_20155 PF00294 pfkB family carbohydrate kinase ECB94_20160 PF01081 KDPG and KHG aldolase ECB94_20165 PF00474 Sodium:solute symporter family ECB94_20170 PF00892 EamA-like transporter family ECB94_20180 PF13472 GDSL-like Lipase/Acylhydrolase family ECB94_20180 PF07859 alpha/beta hydrolase fold ECB94_20190 PF07883 Cupin domain ECB94_20205 PF01614 Bacterial transcriptional regulator ECB94_20205 PF09339 IclR helix-turn-helix domain ECB94_20220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_20220 PF17200 Single Cache domain 2 ECB94_20220 PF00672 HAMP domain ECB94_20240 PF00474 Sodium:solute symporter family ECB94_20245 PF00474 Sodium:solute symporter family ECB94_20250 PF02614 Glucuronate isomerase ECB94_20260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ECB94_20265 PF03466 LysR substrate binding domain ECB94_20265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_20275 PF01124 MAPEG family ECB94_20305 PF08359 YsiA-like protein, C-terminal region ECB94_20305 PF00440 Bacterial regulatory proteins, tetR family ECB94_20310 PF00128 Alpha amylase, catalytic domain ECB94_20310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ECB94_20310 PF02806 Alpha amylase, C-terminal all-beta domain ECB94_20315 PF02446 4-alpha-glucanotransferase ECB94_20320 PF00343 Carbohydrate phosphorylase ECB94_20325 PF17874 MalT-like TPR region ECB94_20325 PF00196 Bacterial regulatory proteins, luxR family ECB94_20350 PF03412 Peptidase C39 family ECB94_20350 PF00664 ABC transporter transmembrane region ECB94_20350 PF00005 ABC transporter ECB94_20365 PF02794 RTX toxin acyltransferase family ECB94_20375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_20380 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_20385 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_20390 PF01266 FAD dependent oxidoreductase ECB94_20405 PF03601 Conserved hypothetical protein 698 ECB94_20410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ECB94_20410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ECB94_20410 PF00205 Thiamine pyrophosphate enzyme, central domain ECB94_20415 PF08406 CbbQ/NirQ/NorQ C-terminal ECB94_20415 PF07728 AAA domain (dynein-related subfamily) ECB94_20415 PF12556 Cobaltochelatase CobS subunit N terminal ECB94_20420 PF11775 Cobalamin biosynthesis protein CobT VWA domain ECB94_20420 PF06213 Cobalamin biosynthesis protein CobT ECB94_20425 PF02615 Malate/L-lactate dehydrogenase ECB94_20430 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_20435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_20440 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_20445 PF00596 Class II Aldolase and Adducin N-terminal domain ECB94_20460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ECB94_20460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ECB94_20465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ECB94_20470 PF01614 Bacterial transcriptional regulator ECB94_20470 PF09339 IclR helix-turn-helix domain ECB94_20475 PF01261 Xylose isomerase-like TIM barrel ECB94_20490 PF13419 Haloacid dehalogenase-like hydrolase ECB94_20495 PF01925 Sulfite exporter TauE/SafE ECB94_20500 PF01515 Phosphate acetyl/butaryl transferase ECB94_20505 PF09339 IclR helix-turn-helix domain ECB94_20505 PF01614 Bacterial transcriptional regulator ECB94_20510 PF13599 Pentapeptide repeats (9 copies) ECB94_20515 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_20520 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_20530 PF00005 ABC transporter ECB94_20540 PF07690 Major Facilitator Superfamily ECB94_20545 PF03358 NADPH-dependent FMN reductase ECB94_20550 PF01641 SelR domain ECB94_20550 PF01625 Peptide methionine sulfoxide reductase ECB94_20555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_20555 PF12793 Sugar transport-related sRNA regulator N-term ECB94_20560 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_20560 PF12464 Maltose acetyltransferase ECB94_20565 PF12464 Maltose acetyltransferase ECB94_20565 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_20565 PF14602 Hexapeptide repeat of succinyl-transferase ECB94_20570 PF00156 Phosphoribosyl transferase domain ECB94_20570 PF01171 PP-loop family ECB94_20570 PF11734 TilS substrate C-terminal domain ECB94_20575 PF05368 NmrA-like family ECB94_20580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_20580 PF03466 LysR substrate binding domain ECB94_20590 PF03239 Iron permease FTR1 family ECB94_20595 PF10634 Fe2+ transport protein ECB94_20615 PF00005 ABC transporter ECB94_20615 PF12704 MacB-like periplasmic core domain ECB94_20615 PF02687 FtsX-like permease family ECB94_20620 PF00578 AhpC/TSA family ECB94_20630 PF04205 FMN-binding domain ECB94_20645 PF03280 Proteobacterial lipase chaperone protein ECB94_20650 PF00561 alpha/beta hydrolase fold ECB94_20655 PF03372 Endonuclease/Exonuclease/phosphatase family ECB94_20665 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_20665 PF13192 Thioredoxin domain ECB94_20670 PF00578 AhpC/TSA family ECB94_20670 PF10417 C-terminal domain of 1-Cys peroxiredoxin ECB94_20685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_20685 PF03466 LysR substrate binding domain ECB94_20690 PF01810 LysE type translocator ECB94_20705 PF00578 AhpC/TSA family ECB94_20705 PF10417 C-terminal domain of 1-Cys peroxiredoxin ECB94_20710 PF00958 GMP synthase C terminal domain ECB94_20710 PF00117 Glutamine amidotransferase class-I ECB94_20710 PF03352 Methyladenine glycosylase ECB94_20710 PF13302 Acetyltransferase (GNAT) domain ECB94_20710 PF13673 Acetyltransferase (GNAT) domain ECB94_20715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_20715 PF00512 His Kinase A (phospho-acceptor) domain ECB94_20715 PF07689 KaiB domain ECB94_20720 PF00072 Response regulator receiver domain ECB94_20720 PF00486 Transcriptional regulatory protein, C terminal ECB94_20730 PF00174 Oxidoreductase molybdopterin binding domain ECB94_20735 PF01794 Ferric reductase like transmembrane component ECB94_20740 PF03729 Short repeat of unknown function (DUF308) ECB94_20745 PF03466 LysR substrate binding domain ECB94_20745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_20765 PF12706 Beta-lactamase superfamily domain ECB94_20775 PF07969 Amidohydrolase family ECB94_20780 PF00005 ABC transporter ECB94_20785 PF00005 ABC transporter ECB94_20790 PF06007 Phosphonate metabolism protein PhnJ ECB94_20795 PF05861 Bacterial phosphonate metabolism protein (PhnI) ECB94_20800 PF05845 Bacterial phosphonate metabolism protein (PhnH) ECB94_20805 PF06754 Phosphonate metabolism protein PhnG ECB94_20810 PF07702 UTRA domain ECB94_20810 PF00392 Bacterial regulatory proteins, gntR family ECB94_20830 PF00072 Response regulator receiver domain ECB94_20830 PF00512 His Kinase A (phospho-acceptor) domain ECB94_20830 PF01627 Hpt domain ECB94_20830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_20830 PF00672 HAMP domain ECB94_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_20835 PF04286 Protein of unknown function (DUF445) ECB94_20840 PF00672 HAMP domain ECB94_20840 PF02743 Cache domain ECB94_20840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_20855 PF03466 LysR substrate binding domain ECB94_20855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_20865 PF00012 Hsp70 protein ECB94_20870 PF00583 Acetyltransferase (GNAT) family ECB94_20880 PF01261 Xylose isomerase-like TIM barrel ECB94_20885 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ECB94_20895 PF00596 Class II Aldolase and Adducin N-terminal domain ECB94_20900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_20905 PF03611 PTS system sugar-specific permease component ECB94_20910 PF08220 DeoR-like helix-turn-helix domain ECB94_20910 PF00455 DeoR C terminal sensor domain ECB94_20935 PF00392 Bacterial regulatory proteins, gntR family ECB94_20935 PF07702 UTRA domain ECB94_20940 PF02056 Family 4 glycosyl hydrolase ECB94_20940 PF11975 Family 4 glycosyl hydrolase C-terminal domain ECB94_20945 PF00367 phosphotransferase system, EIIB ECB94_20945 PF02378 Phosphotransferase system, EIIC ECB94_20950 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_20950 PF00107 Zinc-binding dehydrogenase ECB94_20965 PF02801 Beta-ketoacyl synthase, C-terminal domain ECB94_20965 PF00698 Acyl transferase domain ECB94_20965 PF00109 Beta-ketoacyl synthase, N-terminal domain ECB94_20965 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_20965 PF14765 Polyketide synthase dehydratase ECB94_20965 PF08990 Erythronolide synthase docking ECB94_20965 PF08659 KR domain ECB94_20965 PF09277 Erythronolide synthase, docking ECB94_20965 PF00550 Phosphopantetheine attachment site ECB94_20965 PF16197 Ketoacyl-synthetase C-terminal extension ECB94_20970 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_20970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_20985 PF09278 MerR, DNA binding ECB94_20985 PF00376 MerR family regulatory protein ECB94_20995 PF05127 Helicase ECB94_20995 PF13718 GNAT acetyltransferase 2 ECB94_21005 PF18607 ParA helix turn helix domain ECB94_21005 PF13614 AAA domain ECB94_21025 PF01709 Transcriptional regulator ECB94_21035 PF03466 LysR substrate binding domain ECB94_21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_21040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_21040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ECB94_21055 PF03616 Sodium/glutamate symporter ECB94_21065 PF00664 ABC transporter transmembrane region ECB94_21065 PF00005 ABC transporter ECB94_21065 PF03412 Peptidase C39 family ECB94_21080 PF00529 HlyD membrane-fusion protein of T1SS ECB94_21085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ECB94_21085 PF01243 Pyridoxamine 5'-phosphate oxidase ECB94_21090 PF12833 Helix-turn-helix domain ECB94_21095 PF00392 Bacterial regulatory proteins, gntR family ECB94_21095 PF07702 UTRA domain ECB94_21100 PF01547 Bacterial extracellular solute-binding protein ECB94_21120 PF08402 TOBE domain ECB94_21120 PF00005 ABC transporter ECB94_21135 PF01699 Sodium/calcium exchanger protein ECB94_21140 PF02355 Protein export membrane protein ECB94_21140 PF07549 SecD/SecF GG Motif ECB94_21145 PF13721 SecD export protein N-terminal TM region ECB94_21145 PF02355 Protein export membrane protein ECB94_21145 PF07549 SecD/SecF GG Motif ECB94_21155 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ECB94_21160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_21165 PF02378 Phosphotransferase system, EIIC ECB94_21170 PF00232 Glycosyl hydrolase family 1 ECB94_21175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ECB94_21175 PF00356 Bacterial regulatory proteins, lacI family ECB94_21180 PF00920 Dehydratase family ECB94_21185 PF01202 Shikimate kinase ECB94_21190 PF00232 Glycosyl hydrolase family 1 ECB94_21195 PF01619 Proline dehydrogenase ECB94_21195 PF00171 Aldehyde dehydrogenase family ECB94_21195 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ECB94_21195 PF14850 DNA-binding domain of Proline dehydrogenase ECB94_21205 PF00474 Sodium:solute symporter family ECB94_21210 PF14864 Alkyl sulfatase C-terminal ECB94_21210 PF14863 Alkyl sulfatase dimerisation ECB94_21210 PF00753 Metallo-beta-lactamase superfamily ECB94_21215 PF08173 Membrane bound YbgT-like protein ECB94_21220 PF02322 Cytochrome bd terminal oxidase subunit II ECB94_21225 PF01654 Cytochrome bd terminal oxidase subunit I ECB94_21240 PF05114 Protein of unknown function (DUF692) ECB94_21255 PF01116 Fructose-bisphosphate aldolase class-II ECB94_21260 PF01979 Amidohydrolase family ECB94_21270 PF03613 PTS system mannose/fructose/sorbose family IID component ECB94_21275 PF03609 PTS system sorbose-specific iic component ECB94_21280 PF03830 PTS system sorbose subfamily IIB component ECB94_21285 PF01380 SIS domain ECB94_21290 PF08013 Tagatose 6 phosphate kinase ECB94_21295 PF00455 DeoR C terminal sensor domain ECB94_21295 PF08220 DeoR-like helix-turn-helix domain ECB94_21305 PF00455 DeoR C terminal sensor domain ECB94_21305 PF08220 DeoR-like helix-turn-helix domain ECB94_21315 PF13533 Biotin-lipoyl like ECB94_21320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_21325 PF00873 AcrB/AcrD/AcrF family ECB94_21335 PF01037 Lrp/AsnC ligand binding domain ECB94_21345 PF00375 Sodium:dicarboxylate symporter family ECB94_21355 PF03193 RsgA GTPase ECB94_21395 PF02321 Outer membrane efflux protein ECB94_21400 PF04545 Sigma-70, region 4 ECB94_21400 PF00140 Sigma-70 factor, region 1.2 ECB94_21400 PF04542 Sigma-70 region 2 ECB94_21415 PF00486 Transcriptional regulatory protein, C terminal ECB94_21415 PF18500 CadC C-terminal domain 1 ECB94_21420 PF00155 Aminotransferase class I and II ECB94_21430 PF13533 Biotin-lipoyl like ECB94_21435 PF00873 AcrB/AcrD/AcrF family ECB94_21460 PF02253 Phospholipase A1 ECB94_21465 PF00486 Transcriptional regulatory protein, C terminal ECB94_21465 PF18500 CadC C-terminal domain 1 ECB94_21475 PF00140 Sigma-70 factor, region 1.2 ECB94_21475 PF04542 Sigma-70 region 2 ECB94_21475 PF04545 Sigma-70, region 4 ECB94_21490 PF06826 Predicted Permease Membrane Region ECB94_21490 PF02080 TrkA-C domain ECB94_21495 PF00282 Pyridoxal-dependent decarboxylase conserved domain ECB94_21505 PF13533 Biotin-lipoyl like ECB94_21545 PF02630 SCO1/SenC ECB94_21560 PF12804 MobA-like NTP transferase domain ECB94_21560 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_21560 PF03479 Plants and Prokaryotes Conserved (PCC) domain ECB94_21570 PF02798 Glutathione S-transferase, N-terminal domain ECB94_21570 PF14497 Glutathione S-transferase, C-terminal domain ECB94_21580 PF04209 homogentisate 1,2-dioxygenase ECB94_21585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_21590 PF03605 Anaerobic c4-dicarboxylate membrane transporter ECB94_21595 PF13698 Domain of unknown function (DUF4156) ECB94_21600 PF00664 ABC transporter transmembrane region ECB94_21600 PF00005 ABC transporter ECB94_21610 PF09905 DNA-binding protein VF530 ECB94_21630 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_21655 PF03466 LysR substrate binding domain ECB94_21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_21660 PF00512 His Kinase A (phospho-acceptor) domain ECB94_21660 PF08521 Two-component sensor kinase N-terminal ECB94_21660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_21665 PF00486 Transcriptional regulatory protein, C terminal ECB94_21665 PF00072 Response regulator receiver domain ECB94_21670 PF13533 Biotin-lipoyl like ECB94_21675 PF00873 AcrB/AcrD/AcrF family ECB94_21685 PF00158 Sigma-54 interaction domain ECB94_21685 PF02954 Bacterial regulatory protein, Fis family ECB94_21685 PF00072 Response regulator receiver domain ECB94_21690 PF00512 His Kinase A (phospho-acceptor) domain ECB94_21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_21700 PF00119 ATP synthase A chain ECB94_21705 PF00137 ATP synthase subunit C ECB94_21710 PF00430 ATP synthase B/B' CF(0) ECB94_21715 PF00213 ATP synthase delta (OSCP) subunit ECB94_21720 PF00306 ATP synthase alpha/beta chain, C terminal domain ECB94_21720 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECB94_21720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_21725 PF00231 ATP synthase ECB94_21730 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECB94_21730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_21735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ECB94_21735 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ECB94_21745 PF03466 LysR substrate binding domain ECB94_21745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_21760 PF01554 MatE ECB94_21765 PF02798 Glutathione S-transferase, N-terminal domain ECB94_21765 PF14497 Glutathione S-transferase, C-terminal domain ECB94_21775 PF00210 Ferritin-like domain ECB94_21795 PF00392 Bacterial regulatory proteins, gntR family ECB94_21795 PF00155 Aminotransferase class I and II ECB94_21800 PF13520 Amino acid permease ECB94_21805 PF04074 YhcH/YjgK/YiaL ECB94_21810 PF00703 Glycosyl hydrolases family 2 ECB94_21810 PF02929 Beta galactosidase small chain ECB94_21810 PF16353 Domain of unknown function(DUF4981) ECB94_21810 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ECB94_21810 PF02837 Glycosyl hydrolases family 2, sugar binding domain ECB94_21815 PF00356 Bacterial regulatory proteins, lacI family ECB94_21845 PF03600 Citrate transporter ECB94_21860 PF02581 Thiamine monophosphate synthase ECB94_21885 PF00939 Sodium:sulfate symporter transmembrane region ECB94_21890 PF13472 GDSL-like Lipase/Acylhydrolase family ECB94_21895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ECB94_21910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_21910 PF03466 LysR substrate binding domain ECB94_21920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ECB94_21920 PF00128 Alpha amylase, catalytic domain ECB94_21945 PF03466 LysR substrate binding domain ECB94_21945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_21955 PF00005 ABC transporter ECB94_21965 PF04225 Opacity-associated protein A LysM-like domain ECB94_21965 PF01551 Peptidase family M23 ECB94_21975 PF12800 4Fe-4S binding domain ECB94_21975 PF12838 4Fe-4S dicluster domain ECB94_21980 PF12837 4Fe-4S binding domain ECB94_21980 PF12801 4Fe-4S binding domain ECB94_22010 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_22015 PF01042 Endoribonuclease L-PSP ECB94_22020 PF00557 Metallopeptidase family M24 ECB94_22020 PF01321 Creatinase/Prolidase N-terminal domain ECB94_22040 PF13309 HTH domain ECB94_22040 PF08348 YheO-like PAS domain ECB94_22045 PF01321 Creatinase/Prolidase N-terminal domain ECB94_22045 PF00557 Metallopeptidase family M24 ECB94_22055 PF07687 Peptidase dimerisation domain ECB94_22055 PF01546 Peptidase family M20/M25/M40 ECB94_22060 PF01053 Cys/Met metabolism PLP-dependent enzyme ECB94_22065 PF01037 Lrp/AsnC ligand binding domain ECB94_22070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_22070 PF00072 Response regulator receiver domain ECB94_22070 PF01627 Hpt domain ECB94_22070 PF00512 His Kinase A (phospho-acceptor) domain ECB94_22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_22070 PF00672 HAMP domain ECB94_22075 PF00072 Response regulator receiver domain ECB94_22080 PF00202 Aminotransferase class-III ECB94_22090 PF16868 NMT1-like family ECB94_22095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22095 PF03466 LysR substrate binding domain ECB94_22100 PF00571 CBS domain ECB94_22100 PF01380 SIS domain ECB94_22105 PF03608 PTS system enzyme II sorbitol-specific factor ECB94_22110 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ECB94_22110 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ECB94_22115 PF03829 PTS system glucitol/sorbitol-specific IIA component ECB94_22120 PF00106 short chain dehydrogenase ECB94_22130 PF08220 DeoR-like helix-turn-helix domain ECB94_22130 PF00455 DeoR C terminal sensor domain ECB94_22135 PF03608 PTS system enzyme II sorbitol-specific factor ECB94_22140 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ECB94_22140 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ECB94_22145 PF03829 PTS system glucitol/sorbitol-specific IIA component ECB94_22160 PF03605 Anaerobic c4-dicarboxylate membrane transporter ECB94_22165 PF07646 Kelch motif ECB94_22170 PF01344 Kelch motif ECB94_22175 PF01418 Helix-turn-helix domain, rpiR family ECB94_22175 PF01380 SIS domain ECB94_22180 PF00701 Dihydrodipicolinate synthetase family ECB94_22185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_22190 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_22195 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_22200 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ECB94_22205 PF00480 ROK family ECB94_22210 PF01979 Amidohydrolase family ECB94_22220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22220 PF03466 LysR substrate binding domain ECB94_22225 PF12706 Beta-lactamase superfamily domain ECB94_22250 PF00873 AcrB/AcrD/AcrF family ECB94_22255 PF00144 Beta-lactamase ECB94_22295 PF00873 AcrB/AcrD/AcrF family ECB94_22300 PF00529 HlyD membrane-fusion protein of T1SS ECB94_22300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_22305 PF00593 TonB dependent receptor ECB94_22305 PF07715 TonB-dependent Receptor Plug Domain ECB94_22310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22310 PF03466 LysR substrate binding domain ECB94_22315 PF13533 Biotin-lipoyl like ECB94_22320 PF07690 Major Facilitator Superfamily ECB94_22325 PF00440 Bacterial regulatory proteins, tetR family ECB94_22330 PF00582 Universal stress protein family ECB94_22345 PF02798 Glutathione S-transferase, N-terminal domain ECB94_22350 PF03466 LysR substrate binding domain ECB94_22350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_22390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_22395 PF00392 Bacterial regulatory proteins, gntR family ECB94_22395 PF07702 UTRA domain ECB94_22400 PF02901 Pyruvate formate lyase-like ECB94_22400 PF01228 Glycine radical ECB94_22405 PF13187 4Fe-4S dicluster domain ECB94_22405 PF04055 Radical SAM superfamily ECB94_22415 PF00483 Nucleotidyl transferase ECB94_22420 PF00675 Insulinase (Peptidase family M16) ECB94_22420 PF05193 Peptidase M16 inactive domain ECB94_22425 PF00011 Hsp20/alpha crystallin family ECB94_22430 PF00012 Hsp70 protein ECB94_22435 PF01556 DnaJ C terminal domain ECB94_22435 PF00226 DnaJ domain ECB94_22435 PF00684 DnaJ central domain ECB94_22440 PF00255 Glutathione peroxidase ECB94_22445 PF03616 Sodium/glutamate symporter ECB94_22450 PF00924 Mechanosensitive ion channel ECB94_22455 PF08543 Phosphomethylpyrimidine kinase ECB94_22460 PF00384 Molybdopterin oxidoreductase ECB94_22460 PF18364 Molybdopterin oxidoreductase N-terminal domain ECB94_22460 PF01568 Molydopterin dinucleotide binding domain ECB94_22465 PF03264 NapC/NirT cytochrome c family, N-terminal region ECB94_22470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_22470 PF00529 HlyD membrane-fusion protein of T1SS ECB94_22475 PF11742 Protein of unknown function (DUF3302) ECB94_22490 PF01048 Phosphorylase superfamily ECB94_22495 PF08349 Protein of unknown function (DUF1722) ECB94_22500 PF13411 MerR HTH family regulatory protein ECB94_22505 PF03441 FAD binding domain of DNA photolyase ECB94_22505 PF00875 DNA photolyase ECB94_22510 PF17969 L,D-transpeptidase C-terminal domain ECB94_22510 PF01476 LysM domain ECB94_22510 PF03734 L,D-transpeptidase catalytic domain ECB94_22520 PF00270 DEAD/DEAH box helicase ECB94_22520 PF00271 Helicase conserved C-terminal domain ECB94_22525 PF12849 PBP superfamily domain ECB94_22530 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_22535 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_22540 PF00005 ABC transporter ECB94_22555 PF13419 Haloacid dehalogenase-like hydrolase ECB94_22560 PF00034 Cytochrome c ECB94_22565 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECB94_22575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ECB94_22575 PF00034 Cytochrome c ECB94_22580 PF00563 EAL domain ECB94_22580 PF00990 Diguanylate cyclase, GGDEF domain ECB94_22580 PF03707 Bacterial signalling protein N terminal repeat ECB94_22585 PF00854 POT family ECB94_22590 PF00158 Sigma-54 interaction domain ECB94_22590 PF01590 GAF domain ECB94_22600 PF00258 Flavodoxin ECB94_22600 PF00301 Rubredoxin ECB94_22600 PF00753 Metallo-beta-lactamase superfamily ECB94_22605 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_22605 PF18113 Rubredoxin binding C-terminal domain ECB94_22610 PF00873 AcrB/AcrD/AcrF family ECB94_22625 PF03466 LysR substrate binding domain ECB94_22625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22665 PF13419 Haloacid dehalogenase-like hydrolase ECB94_22685 PF00106 short chain dehydrogenase ECB94_22695 PF01074 Glycosyl hydrolases family 38 N-terminal domain ECB94_22695 PF07748 Glycosyl hydrolases family 38 C-terminal domain ECB94_22695 PF09261 Alpha mannosidase middle domain ECB94_22700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_22700 PF02378 Phosphotransferase system, EIIC ECB94_22700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_22705 PF07702 UTRA domain ECB94_22705 PF00392 Bacterial regulatory proteins, gntR family ECB94_22710 PF13419 Haloacid dehalogenase-like hydrolase ECB94_22720 PF00266 Aminotransferase class-V ECB94_22730 PF00005 ABC transporter ECB94_22735 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_22740 PF07702 UTRA domain ECB94_22740 PF00392 Bacterial regulatory proteins, gntR family ECB94_22765 PF07690 Major Facilitator Superfamily ECB94_22795 PF00199 Catalase ECB94_22795 PF06628 Catalase-related immune-responsive ECB94_22810 PF02056 Family 4 glycosyl hydrolase ECB94_22810 PF11975 Family 4 glycosyl hydrolase C-terminal domain ECB94_22815 PF12833 Helix-turn-helix domain ECB94_22820 PF02600 Disulfide bond formation protein DsbB ECB94_22825 PF01979 Amidohydrolase family ECB94_22830 PF02424 ApbE family ECB94_22835 PF04205 FMN-binding domain ECB94_22835 PF03358 NADPH-dependent FMN reductase ECB94_22835 PF00890 FAD binding domain ECB94_22845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ECB94_22855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_22855 PF00005 ABC transporter ECB94_22860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ECB94_22860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ECB94_22860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ECB94_22860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ECB94_22865 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ECB94_22870 PF03824 High-affinity nickel-transport protein ECB94_22880 PF02492 CobW/HypB/UreG, nucleotide-binding domain ECB94_22880 PF07683 Cobalamin synthesis protein cobW C-terminal domain ECB94_22885 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_22890 PF01979 Amidohydrolase family ECB94_22905 PF00950 ABC 3 transport family ECB94_22910 PF00005 ABC transporter ECB94_22915 PF01297 Zinc-uptake complex component A periplasmic ECB94_22920 PF00583 Acetyltransferase (GNAT) family ECB94_22930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22930 PF03466 LysR substrate binding domain ECB94_22935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_22940 PF03611 PTS system sugar-specific permease component ECB94_22945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_22970 PF01510 N-acetylmuramoyl-L-alanine amidase ECB94_22985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_22985 PF03466 LysR substrate binding domain ECB94_22990 PF00455 DeoR C terminal sensor domain ECB94_22990 PF08220 DeoR-like helix-turn-helix domain ECB94_23000 PF04055 Radical SAM superfamily ECB94_23005 PF00923 Transaldolase/Fructose-6-phosphate aldolase ECB94_23010 PF02416 mttA/Hcf106 family ECB94_23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23020 PF03466 LysR substrate binding domain ECB94_23030 PF02909 Tetracyclin repressor-like, C-terminal domain ECB94_23030 PF00440 Bacterial regulatory proteins, tetR family ECB94_23035 PF01266 FAD dependent oxidoreductase ECB94_23050 PF00155 Aminotransferase class I and II ECB94_23055 PF00491 Arginase family ECB94_23065 PF13091 PLD-like domain ECB94_23070 PF00892 EamA-like transporter family ECB94_23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23100 PF02469 Fasciclin domain ECB94_23135 PF05362 Lon protease (S16) C-terminal proteolytic domain ECB94_23135 PF13654 AAA domain ECB94_23140 PF07238 PilZ domain ECB94_23140 PF12945 Flagellar protein YcgR ECB94_23145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ECB94_23145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ECB94_23155 PF06560 Glucose-6-phosphate isomerase (GPI) ECB94_23165 PF03613 PTS system mannose/fructose/sorbose family IID component ECB94_23170 PF03609 PTS system sorbose-specific iic component ECB94_23175 PF03830 PTS system sorbose subfamily IIB component ECB94_23175 PF03610 PTS system fructose IIA component ECB94_23190 PF00356 Bacterial regulatory proteins, lacI family ECB94_23195 PF01965 DJ-1/PfpI family ECB94_23210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ECB94_23210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECB94_23230 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ECB94_23240 PF00491 Arginase family ECB94_23245 PF17944 Arginine decarboxylase C-terminal helical extension ECB94_23245 PF17810 Arginine decarboxylase helical bundle domain ECB94_23245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ECB94_23250 PF02954 Bacterial regulatory protein, Fis family ECB94_23250 PF01590 GAF domain ECB94_23250 PF00158 Sigma-54 interaction domain ECB94_23255 PF00171 Aldehyde dehydrogenase family ECB94_23260 PF02522 Aminoglycoside 3-N-acetyltransferase ECB94_23275 PF00313 'Cold-shock' DNA-binding domain ECB94_23280 PF07969 Amidohydrolase family ECB94_23285 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ECB94_23290 PF08032 RNA 2'-O ribose methyltransferase substrate binding ECB94_23290 PF00588 SpoU rRNA Methylase family ECB94_23295 PF00037 4Fe-4S binding domain ECB94_23295 PF11953 Domain of unknown function (DUF3470) ECB94_23305 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ECB94_23305 PF18416 N-acetylglucosamine binding protein domain 2 ECB94_23310 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_23315 PF00221 Aromatic amino acid lyase ECB94_23320 PF17391 Urocanase N-terminal domain ECB94_23320 PF01175 Urocanase Rossmann-like domain ECB94_23320 PF17392 Urocanase C-terminal domain ECB94_23325 PF00491 Arginase family ECB94_23330 PF01979 Amidohydrolase family ECB94_23340 PF07702 UTRA domain ECB94_23340 PF00392 Bacterial regulatory proteins, gntR family ECB94_23345 PF01557 Fumarylacetoacetate (FAA) hydrolase family ECB94_23355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23355 PF03466 LysR substrate binding domain ECB94_23370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ECB94_23370 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ECB94_23375 PF00115 Cytochrome C and Quinol oxidase polypeptide I ECB94_23380 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ECB94_23385 PF00510 Cytochrome c oxidase subunit III ECB94_23405 PF02628 Cytochrome oxidase assembly protein ECB94_23410 PF01040 UbiA prenyltransferase family ECB94_23415 PF13609 Gram-negative porin ECB94_23420 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_23425 PF00497 Bacterial extracellular solute-binding proteins, family 3 ECB94_23430 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_23435 PF00005 ABC transporter ECB94_23445 PF03606 C4-dicarboxylate anaerobic carrier ECB94_23450 PF01546 Peptidase family M20/M25/M40 ECB94_23450 PF07687 Peptidase dimerisation domain ECB94_23455 PF00392 Bacterial regulatory proteins, gntR family ECB94_23455 PF07729 FCD domain ECB94_23460 PF03063 Prismane/CO dehydrogenase family ECB94_23465 PF00970 Oxidoreductase FAD-binding domain ECB94_23465 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_23465 PF00175 Oxidoreductase NAD-binding domain ECB94_23475 PF02525 Flavodoxin-like fold ECB94_23485 PF03466 LysR substrate binding domain ECB94_23485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23490 PF07690 Major Facilitator Superfamily ECB94_23495 PF00912 Transglycosylase ECB94_23505 PF01584 CheW-like domain ECB94_23505 PF00072 Response regulator receiver domain ECB94_23515 PF10928 Protein of unknown function (DUF2810) ECB94_23520 PF00128 Alpha amylase, catalytic domain ECB94_23525 PF00128 Alpha amylase, catalytic domain ECB94_23530 PF00884 Sulfatase ECB94_23530 PF11893 Domain of unknown function (DUF3413) ECB94_23540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_23555 PF17158 Membrane-associated sensor, integral membrane domain ECB94_23555 PF00990 Diguanylate cyclase, GGDEF domain ECB94_23570 PF01418 Helix-turn-helix domain, rpiR family ECB94_23570 PF01380 SIS domain ECB94_23570 PF02685 Glucokinase ECB94_23580 PF07969 Amidohydrolase family ECB94_23590 PF00474 Sodium:solute symporter family ECB94_23595 PF00294 pfkB family carbohydrate kinase ECB94_23600 PF01081 KDPG and KHG aldolase ECB94_23605 PF00728 Glycosyl hydrolase family 20, catalytic domain ECB94_23605 PF02838 Glycosyl hydrolase family 20, domain 2 ECB94_23615 PF00990 Diguanylate cyclase, GGDEF domain ECB94_23615 PF05230 MASE2 domain ECB94_23620 PF13419 Haloacid dehalogenase-like hydrolase ECB94_23630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_23630 PF00512 His Kinase A (phospho-acceptor) domain ECB94_23630 PF09308 LuxQ, periplasmic ECB94_23630 PF00072 Response regulator receiver domain ECB94_23635 PF03150 Di-haem cytochrome c peroxidase ECB94_23635 PF00034 Cytochrome c ECB94_23640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_23645 PF00873 AcrB/AcrD/AcrF family ECB94_23655 PF03606 C4-dicarboxylate anaerobic carrier ECB94_23660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23660 PF03466 LysR substrate binding domain ECB94_23665 PF00196 Bacterial regulatory proteins, luxR family ECB94_23665 PF03472 Autoinducer binding domain ECB94_23670 PF00765 Autoinducer synthase ECB94_23675 PF07694 5TMR of 5TMR-LYT ECB94_23675 PF00990 Diguanylate cyclase, GGDEF domain ECB94_23680 PF03466 LysR substrate binding domain ECB94_23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23685 PF00072 Response regulator receiver domain ECB94_23685 PF00196 Bacterial regulatory proteins, luxR family ECB94_23690 PF00462 Glutaredoxin ECB94_23695 PF00892 EamA-like transporter family ECB94_23700 PF03606 C4-dicarboxylate anaerobic carrier ECB94_23705 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ECB94_23710 PF13609 Gram-negative porin ECB94_23715 PF13609 Gram-negative porin ECB94_23725 PF13609 Gram-negative porin ECB94_23735 PF13519 von Willebrand factor type A domain ECB94_23740 PF13519 von Willebrand factor type A domain ECB94_23750 PF01882 Protein of unknown function DUF58 ECB94_23755 PF17863 AAA lid domain ECB94_23755 PF07726 ATPase family associated with various cellular activities (AAA) ECB94_23765 PF00196 Bacterial regulatory proteins, luxR family ECB94_23785 PF00196 Bacterial regulatory proteins, luxR family ECB94_23795 PF03783 Curli production assembly/transport component CsgG ECB94_23825 PF08402 TOBE domain ECB94_23825 PF00005 ABC transporter ECB94_23830 PF01547 Bacterial extracellular solute-binding protein ECB94_23835 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_23835 PF14785 Maltose transport system permease protein MalF P2 domain ECB94_23840 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_23855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23860 PF00128 Alpha amylase, catalytic domain ECB94_23860 PF16657 Maltogenic Amylase, C-terminal domain ECB94_23870 PF01547 Bacterial extracellular solute-binding protein ECB94_23875 PF02903 Alpha amylase, N-terminal ig-like domain ECB94_23875 PF16657 Maltogenic Amylase, C-terminal domain ECB94_23875 PF00128 Alpha amylase, catalytic domain ECB94_23895 PF00356 Bacterial regulatory proteins, lacI family ECB94_23900 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ECB94_23905 PF02378 Phosphotransferase system, EIIC ECB94_23910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_23915 PF02378 Phosphotransferase system, EIIC ECB94_23940 PF00892 EamA-like transporter family ECB94_23945 PF14480 DNA polymerase III polC-type N-terminus I ECB94_23945 PF11490 DNA polymerase III polC-type N-terminus II ECB94_23945 PF07733 Bacterial DNA polymerase III alpha NTPase domain ECB94_23945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ECB94_23945 PF14579 Helix-hairpin-helix motif ECB94_23945 PF02811 PHP domain ECB94_23945 PF00929 Exonuclease ECB94_23950 PF00209 Sodium:neurotransmitter symporter family ECB94_23955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_23955 PF00672 HAMP domain ECB94_23955 PF02743 Cache domain ECB94_23960 PF01177 Asp/Glu/Hydantoin racemase ECB94_23965 PF00990 Diguanylate cyclase, GGDEF domain ECB94_23970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_23970 PF03466 LysR substrate binding domain ECB94_23990 PF00196 Bacterial regulatory proteins, luxR family ECB94_23990 PF00563 EAL domain ECB94_24005 PF02779 Transketolase, pyrimidine binding domain ECB94_24005 PF00456 Transketolase, thiamine diphosphate binding domain ECB94_24005 PF02780 Transketolase, C-terminal domain ECB94_24010 PF00923 Transaldolase/Fructose-6-phosphate aldolase ECB94_24020 PF03466 LysR substrate binding domain ECB94_24020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_24030 PF00581 Rhodanese-like domain ECB94_24040 PF00899 ThiF family ECB94_24045 PF00994 Probable molybdopterin binding domain ECB94_24045 PF03453 MoeA N-terminal region (domain I and II) ECB94_24045 PF03454 MoeA C-terminal region (domain IV) ECB94_24050 PF01227 GTP cyclohydrolase I ECB94_24055 PF00072 Response regulator receiver domain ECB94_24055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_24060 PF00155 Aminotransferase class I and II ECB94_24070 PF00654 Voltage gated chloride channel ECB94_24075 PF02492 CobW/HypB/UreG, nucleotide-binding domain ECB94_24075 PF07683 Cobalamin synthesis protein cobW C-terminal domain ECB94_24090 PF07726 ATPase family associated with various cellular activities (AAA) ECB94_24090 PF17863 AAA lid domain ECB94_24110 PF13519 von Willebrand factor type A domain ECB94_24110 PF07584 Aerotolerance regulator N-terminal ECB94_24120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_24120 PF03466 LysR substrate binding domain ECB94_24125 PF03466 LysR substrate binding domain ECB94_24125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_24130 PF00990 Diguanylate cyclase, GGDEF domain ECB94_24140 PF03781 Sulfatase-modifying factor enzyme 1 ECB94_24145 PF13186 Iron-sulfur cluster-binding domain ECB94_24145 PF04055 Radical SAM superfamily ECB94_24155 PF03616 Sodium/glutamate symporter ECB94_24170 PF02798 Glutathione S-transferase, N-terminal domain ECB94_24170 PF00043 Glutathione S-transferase, C-terminal domain ECB94_24180 PF12464 Maltose acetyltransferase ECB94_24180 PF14602 Hexapeptide repeat of succinyl-transferase ECB94_24185 PF00563 EAL domain ECB94_24185 PF00990 Diguanylate cyclase, GGDEF domain ECB94_24185 PF03707 Bacterial signalling protein N terminal repeat ECB94_24190 PF05025 RbsD / FucU transport protein family ECB94_24195 PF00005 ABC transporter ECB94_24200 PF02653 Branched-chain amino acid transport system / permease component ECB94_24205 PF13407 Periplasmic binding protein domain ECB94_24210 PF00294 pfkB family carbohydrate kinase ECB94_24215 PF00356 Bacterial regulatory proteins, lacI family ECB94_24220 PF00465 Iron-containing alcohol dehydrogenase ECB94_24230 PF06483 Chitinase C ECB94_24230 PF00704 Glycosyl hydrolases family 18 ECB94_24235 PF00483 Nucleotidyl transferase ECB94_24250 PF00005 ABC transporter ECB94_24250 PF02687 FtsX-like permease family ECB94_24250 PF12704 MacB-like periplasmic core domain ECB94_24255 PF00005 ABC transporter ECB94_24265 PF00293 NUDIX domain ECB94_24275 PF02653 Branched-chain amino acid transport system / permease component ECB94_24280 PF02653 Branched-chain amino acid transport system / permease component ECB94_24295 PF04198 Putative sugar-binding domain ECB94_24300 PF00248 Aldo/keto reductase family ECB94_24305 PF01266 FAD dependent oxidoreductase ECB94_24305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ECB94_24310 PF01791 DeoC/LacD family aldolase ECB94_24315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ECB94_24315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ECB94_24320 PF00465 Iron-containing alcohol dehydrogenase ECB94_24325 PF00171 Aldehyde dehydrogenase family ECB94_24330 PF02412 Thrombospondin type 3 repeat ECB94_24330 PF03422 Carbohydrate binding module (family 6) ECB94_24345 PF00583 Acetyltransferase (GNAT) family ECB94_24350 PF03193 RsgA GTPase ECB94_24360 PF08361 MAATS-type transcriptional repressor, C-terminal region ECB94_24360 PF00440 Bacterial regulatory proteins, tetR family ECB94_24380 PF00512 His Kinase A (phospho-acceptor) domain ECB94_24380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_24380 PF08521 Two-component sensor kinase N-terminal ECB94_24385 PF00072 Response regulator receiver domain ECB94_24385 PF00486 Transcriptional regulatory protein, C terminal ECB94_24390 PF02028 BCCT, betaine/carnitine/choline family transporter ECB94_24395 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_24400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_24405 PF00005 ABC transporter ECB94_24405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_24410 PF00005 ABC transporter ECB94_24410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_24415 PF01554 MatE ECB94_24425 PF01614 Bacterial transcriptional regulator ECB94_24425 PF09339 IclR helix-turn-helix domain ECB94_24435 PF00005 ABC transporter ECB94_24455 PF01875 Memo-like protein ECB94_24465 PF07690 Major Facilitator Superfamily ECB94_24470 PF05524 PEP-utilising enzyme, N-terminal ECB94_24470 PF00391 PEP-utilising enzyme, mobile domain ECB94_24470 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_24470 PF00381 PTS HPr component phosphorylation site ECB94_24470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ECB94_24475 PF09261 Alpha mannosidase middle domain ECB94_24475 PF07748 Glycosyl hydrolases family 38 C-terminal domain ECB94_24475 PF01074 Glycosyl hydrolases family 38 N-terminal domain ECB94_24480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_24485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ECB94_24500 PF07690 Major Facilitator Superfamily ECB94_24515 PF00893 Small Multidrug Resistance protein ECB94_24525 PF05573 NosL ECB94_24530 PF12679 ABC-2 family transporter protein ECB94_24535 PF00005 ABC transporter ECB94_24540 PF05048 Periplasmic copper-binding protein (NosD) ECB94_24545 PF18764 Nitrous oxide reductase propeller repeat ECB94_24545 PF18793 Nitrous oxide reductase propeller repeat 2 ECB94_24550 PF04205 FMN-binding domain ECB94_24550 PF12801 4Fe-4S binding domain ECB94_24555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_24560 PF04993 TfoX N-terminal domain ECB94_24560 PF04994 TfoX C-terminal domain ECB94_24575 PF00005 ABC transporter ECB94_24575 PF00571 CBS domain ECB94_24580 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_24595 PF03466 LysR substrate binding domain ECB94_24595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_24620 PF00248 Aldo/keto reductase family ECB94_24625 PF01551 Peptidase family M23 ECB94_24625 PF01476 LysM domain ECB94_24625 PF08525 Opacity-associated protein A N-terminal motif ECB94_24640 PF00586 AIR synthase related protein, N-terminal domain ECB94_24640 PF02769 AIR synthase related protein, C-terminal domain ECB94_24650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ECB94_24650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECB94_24655 PF01799 [2Fe-2S] binding domain ECB94_24655 PF00111 2Fe-2S iron-sulfur cluster binding domain ECB94_24660 PF00860 Permease family ECB94_24665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ECB94_24665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ECB94_24670 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_24675 PF07687 Peptidase dimerisation domain ECB94_24675 PF01546 Peptidase family M20/M25/M40 ECB94_24680 PF01979 Amidohydrolase family ECB94_24685 PF00696 Amino acid kinase family ECB94_24690 PF00005 ABC transporter ECB94_24695 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_24700 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_24705 PF12849 PBP superfamily domain ECB94_24715 PF00512 His Kinase A (phospho-acceptor) domain ECB94_24715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_24715 PF00672 HAMP domain ECB94_24715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_24715 PF00072 Response regulator receiver domain ECB94_24715 PF01627 Hpt domain ECB94_24720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ECB94_24720 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_24730 PF02811 PHP domain ECB94_24805 PF00583 Acetyltransferase (GNAT) family ECB94_24820 PF14602 Hexapeptide repeat of succinyl-transferase ECB94_24820 PF00132 Bacterial transferase hexapeptide (six repeats) ECB94_24820 PF12804 MobA-like NTP transferase domain ECB94_24825 PF13673 Acetyltransferase (GNAT) domain ECB94_24830 PF00795 Carbon-nitrogen hydrolase ECB94_24845 PF13302 Acetyltransferase (GNAT) domain ECB94_24870 PF00795 Carbon-nitrogen hydrolase ECB94_24875 PF05656 Protein of unknown function (DUF805) ECB94_24895 PF00583 Acetyltransferase (GNAT) family ECB94_24900 PF01566 Natural resistance-associated macrophage protein ECB94_24905 PF04463 Protein of unknown function (DUF523) ECB94_24945 PF01204 Trehalase ECB94_24950 PF13478 XdhC Rossmann domain ECB94_24950 PF02625 XdhC and CoxI family ECB94_24960 PF12804 MobA-like NTP transferase domain ECB94_24965 PF00941 FAD binding domain in molybdopterin dehydrogenase ECB94_24970 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECB94_24970 PF01799 [2Fe-2S] binding domain ECB94_24970 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ECB94_24975 PF01979 Amidohydrolase family ECB94_24980 PF00860 Permease family ECB94_24985 PF01047 MarR family ECB94_24990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ECB94_24990 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_24995 PF01979 Amidohydrolase family ECB94_25000 PF00884 Sulfatase ECB94_25005 PF00884 Sulfatase ECB94_25010 PF12462 DNA helicase IV / RNA helicase N terminal ECB94_25010 PF00580 UvrD/REP helicase N-terminal domain ECB94_25010 PF13361 UvrD-like helicase C-terminal domain ECB94_25015 PF00672 HAMP domain ECB94_25015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_25015 PF12729 Four helix bundle sensory module for signal transduction ECB94_25020 PF13419 Haloacid dehalogenase-like hydrolase ECB94_25025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ECB94_25025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ECB94_25035 PF05736 OprF membrane domain ECB94_25035 PF00691 OmpA family ECB94_25040 PF01268 Formate--tetrahydrofolate ligase ECB94_25045 PF00294 pfkB family carbohydrate kinase ECB94_25050 PF00990 Diguanylate cyclase, GGDEF domain ECB94_25065 PF13419 Haloacid dehalogenase-like hydrolase ECB94_25075 PF00672 HAMP domain ECB94_25075 PF16591 Helical bimodular sensor domain ECB94_25075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_25080 PF03222 Tryptophan/tyrosine permease family ECB94_25090 PF08274 PhnA Zinc-Ribbon ECB94_25090 PF03831 PhnA domain ECB94_25095 PF00703 Glycosyl hydrolases family 2 ECB94_25095 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain ECB94_25095 PF02837 Glycosyl hydrolases family 2, sugar binding domain ECB94_25100 PF00682 HMGL-like ECB94_25105 PF00378 Enoyl-CoA hydratase/isomerase ECB94_25110 PF01039 Carboxyl transferase domain ECB94_25115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ECB94_25115 PF02770 Acyl-CoA dehydrogenase, middle domain ECB94_25115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ECB94_25120 PF00376 MerR family regulatory protein ECB94_25120 PF09278 MerR, DNA binding ECB94_25125 PF00108 Thiolase, N-terminal domain ECB94_25125 PF02803 Thiolase, C-terminal domain ECB94_25130 PF00171 Aldehyde dehydrogenase family ECB94_25135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ECB94_25135 PF02770 Acyl-CoA dehydrogenase, middle domain ECB94_25135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ECB94_25140 PF00378 Enoyl-CoA hydratase/isomerase ECB94_25145 PF00378 Enoyl-CoA hydratase/isomerase ECB94_25150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ECB94_25150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_25165 PF01012 Electron transfer flavoprotein domain ECB94_25170 PF01012 Electron transfer flavoprotein domain ECB94_25170 PF00766 Electron transfer flavoprotein FAD-binding domain ECB94_25175 PF13649 Methyltransferase domain ECB94_25185 PF00293 NUDIX domain ECB94_25190 PF03060 Nitronate monooxygenase ECB94_25200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ECB94_25200 PF00364 Biotin-requiring enzyme ECB94_25200 PF02817 e3 binding domain ECB94_25205 PF02780 Transketolase, C-terminal domain ECB94_25205 PF02779 Transketolase, pyrimidine binding domain ECB94_25210 PF00676 Dehydrogenase E1 component ECB94_25215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ECB94_25220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_25220 PF03466 LysR substrate binding domain ECB94_25225 PF00155 Aminotransferase class I and II ECB94_25230 PF00107 Zinc-binding dehydrogenase ECB94_25230 PF08240 Alcohol dehydrogenase GroES-like domain ECB94_25245 PF08264 Anticodon-binding domain of tRNA ECB94_25245 PF00133 tRNA synthetases class I (I, L, M and V) ECB94_25265 PF11756 Nitrous oxide-stimulated promoter ECB94_25315 PF01292 Prokaryotic cytochrome b561 ECB94_25320 PF04264 YceI-like domain ECB94_25330 PF01226 Formate/nitrite transporter ECB94_25335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_25335 PF03466 LysR substrate binding domain ECB94_25340 PF06496 Protein of unknown function (DUF1097) ECB94_25345 PF11398 Protein of unknown function (DUF2813) ECB94_25350 PF00149 Calcineurin-like phosphoesterase ECB94_25350 PF02872 5'-nucleotidase, C-terminal domain ECB94_25365 PF04363 Protein of unknown function (DUF496) ECB94_25375 PF04337 Protein of unknown function, DUF480 ECB94_25380 PF01541 GIY-YIG catalytic domain ECB94_25385 PF13407 Periplasmic binding protein domain ECB94_25390 PF00512 His Kinase A (phospho-acceptor) domain ECB94_25390 PF09308 LuxQ, periplasmic ECB94_25390 PF00072 Response regulator receiver domain ECB94_25390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_25400 PF12805 FUSC-like inner membrane protein yccS ECB94_25405 PF01926 50S ribosome-binding GTPase ECB94_25410 PF03466 LysR substrate binding domain ECB94_25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_25445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ECB94_25445 PF07992 Pyridine nucleotide-disulphide oxidoreductase ECB94_25455 PF04143 Sulphur transport ECB94_25470 PF13597 Anaerobic ribonucleoside-triphosphate reductase ECB94_25470 PF03477 ATP cone domain ECB94_25480 PF00155 Aminotransferase class I and II ECB94_25485 PF18030 RimK PreATP-grasp domain ECB94_25485 PF08443 RimK-like ATP-grasp domain ECB94_25500 PF07685 CobB/CobQ-like glutamine amidotransferase domain ECB94_25500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ECB94_25510 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_25515 PF00005 ABC transporter ECB94_25515 PF03459 TOBE domain ECB94_25525 PF00990 Diguanylate cyclase, GGDEF domain ECB94_25525 PF17151 Periplasmic sensor domain ECB94_25535 PF00990 Diguanylate cyclase, GGDEF domain ECB94_25535 PF00072 Response regulator receiver domain ECB94_25545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ECB94_25545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ECB94_25545 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ECB94_25550 PF02233 NAD(P) transhydrogenase beta subunit ECB94_25565 PF00486 Transcriptional regulatory protein, C terminal ECB94_25565 PF00072 Response regulator receiver domain ECB94_25580 PF03701 Uncharacterised protein family (UPF0181) ECB94_25585 PF01253 Translation initiation factor SUI1 ECB94_25600 PF01820 D-ala D-ala ligase N-terminus ECB94_25600 PF07478 D-ala D-ala ligase C-terminus ECB94_25605 PF05036 Sporulation related domain ECB94_25610 PF13380 CoA binding domain ECB94_25610 PF13607 Succinyl-CoA ligase like flavodoxin domain ECB94_25610 PF00583 Acetyltransferase (GNAT) family ECB94_25615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_25615 PF03466 LysR substrate binding domain ECB94_25620 PF07715 TonB-dependent Receptor Plug Domain ECB94_25620 PF00593 TonB dependent receptor ECB94_25655 PF00989 PAS fold ECB94_25655 PF01627 Hpt domain ECB94_25655 PF00072 Response regulator receiver domain ECB94_25655 PF18415 Histidine kinase receptor ArcB trans-membrane domain ECB94_25655 PF00512 His Kinase A (phospho-acceptor) domain ECB94_25655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_25660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ECB94_25665 PF02142 MGS-like domain ECB94_25670 PF00364 Biotin-requiring enzyme ECB94_25670 PF00561 alpha/beta hydrolase fold ECB94_25675 PF00672 HAMP domain ECB94_25675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ECB94_25675 PF00072 Response regulator receiver domain ECB94_25675 PF01627 Hpt domain ECB94_25675 PF00512 His Kinase A (phospho-acceptor) domain ECB94_25675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_25685 PF02566 OsmC-like protein ECB94_25690 PF01625 Peptide methionine sulfoxide reductase ECB94_25690 PF01641 SelR domain ECB94_25695 PF00924 Mechanosensitive ion channel ECB94_25705 PF00793 DAHP synthetase I family ECB94_25710 PF08774 VRR-NUC domain ECB94_25710 PF18081 Fanconi anemia-associated nuclease SAP domain ECB94_25725 PF00881 Nitroreductase family ECB94_25745 PF05762 VWA domain containing CoxE-like protein ECB94_25750 PF07728 AAA domain (dynein-related subfamily) ECB94_25750 PF17868 AAA lid domain ECB94_25750 PF12592 Protein of unknown function (DUF3763) ECB94_25755 PF17757 UvrB interaction domain ECB94_25755 PF12344 Ultra-violet resistance protein B ECB94_25755 PF04851 Type III restriction enzyme, res subunit ECB94_25755 PF02151 UvrB/uvrC motif ECB94_25755 PF00271 Helicase conserved C-terminal domain ECB94_25780 PF01420 Type I restriction modification DNA specificity domain ECB94_25785 PF12161 HsdM N-terminal domain ECB94_25785 PF02384 N-6 DNA Methylase ECB94_25795 PF00158 Sigma-54 interaction domain ECB94_25795 PF00072 Response regulator receiver domain ECB94_25795 PF02954 Bacterial regulatory protein, Fis family ECB94_25810 PF09615 CRISPR-associated protein (Cas_Csy3) ECB94_25820 PF01381 Helix-turn-helix ECB94_25830 PF04851 Type III restriction enzyme, res subunit ECB94_25840 PF09299 Mu transposase, C-terminal ECB94_25840 PF00665 Integrase core domain ECB94_25855 PF01256 Carbohydrate kinase ECB94_25855 PF03853 YjeF-related protein N-terminus ECB94_25870 PF00034 Cytochrome c ECB94_25870 PF03150 Di-haem cytochrome c peroxidase ECB94_25885 PF00691 OmpA family ECB94_25885 PF01389 OmpA-like transmembrane domain ECB94_25890 PF01053 Cys/Met metabolism PLP-dependent enzyme ECB94_25905 PF13476 AAA domain ECB94_25910 PF00149 Calcineurin-like phosphoesterase ECB94_25910 PF12320 Type 5 capsule protein repressor C-terminal domain ECB94_25920 PF16527 Two-component sensor protein CpxA, periplasmic domain ECB94_25920 PF00672 HAMP domain ECB94_25920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_25920 PF00512 His Kinase A (phospho-acceptor) domain ECB94_25925 PF00486 Transcriptional regulatory protein, C terminal ECB94_25925 PF00072 Response regulator receiver domain ECB94_25930 PF00873 AcrB/AcrD/AcrF family ECB94_25935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_25945 PF01546 Peptidase family M20/M25/M40 ECB94_25945 PF07687 Peptidase dimerisation domain ECB94_25955 PF03741 Integral membrane protein TerC family ECB94_25965 PF00128 Alpha amylase, catalytic domain ECB94_25970 PF12849 PBP superfamily domain ECB94_25980 PF02321 Outer membrane efflux protein ECB94_25985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_25985 PF00529 HlyD membrane-fusion protein of T1SS ECB94_25990 PF03412 Peptidase C39 family ECB94_25990 PF00005 ABC transporter ECB94_25990 PF00664 ABC transporter transmembrane region ECB94_26005 PF12843 Putative quorum-sensing-regulated virulence factor ECB94_26015 PF03471 Transporter associated domain ECB94_26015 PF00999 Sodium/hydrogen exchanger family ECB94_26015 PF02080 TrkA-C domain ECB94_26020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ECB94_26020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ECB94_26025 PF00085 Thioredoxin ECB94_26030 PF02311 AraC-like ligand binding domain ECB94_26030 PF12833 Helix-turn-helix domain ECB94_26040 PF03466 LysR substrate binding domain ECB94_26040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_26050 PF18030 RimK PreATP-grasp domain ECB94_26050 PF08443 RimK-like ATP-grasp domain ECB94_26060 PF18030 RimK PreATP-grasp domain ECB94_26060 PF08443 RimK-like ATP-grasp domain ECB94_26070 PF01494 FAD binding domain ECB94_26080 PF00005 ABC transporter ECB94_26085 PF13472 GDSL-like Lipase/Acylhydrolase family ECB94_26090 PF12241 Trans-2-enoyl-CoA reductase catalytic region ECB94_26090 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ECB94_26090 PF07055 Enoyl reductase FAD binding domain ECB94_26095 PF03707 Bacterial signalling protein N terminal repeat ECB94_26095 PF00990 Diguanylate cyclase, GGDEF domain ECB94_26095 PF00563 EAL domain ECB94_26105 PF00226 DnaJ domain ECB94_26105 PF01556 DnaJ C terminal domain ECB94_26105 PF00684 DnaJ central domain ECB94_26130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_26130 PF12793 Sugar transport-related sRNA regulator N-term ECB94_26140 PF03061 Thioesterase superfamily ECB94_26145 PF07720 Tetratricopeptide repeat ECB94_26145 PF01435 Peptidase family M48 ECB94_26160 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ECB94_26165 PF12262 Bacterial virulence factor lipase N-terminal ECB94_26170 PF00291 Pyridoxal-phosphate dependent enzyme ECB94_26180 PF00871 Acetokinase family ECB94_26185 PF00271 Helicase conserved C-terminal domain ECB94_26185 PF00270 DEAD/DEAH box helicase ECB94_26185 PF03880 DbpA RNA binding domain ECB94_26195 PF00575 S1 RNA binding domain ECB94_26195 PF00773 RNB domain ECB94_26195 PF08206 Ribonuclease B OB domain ECB94_26205 PF12849 PBP superfamily domain ECB94_26210 PF01906 Putative heavy-metal-binding ECB94_26215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ECB94_26215 PF11852 Domain of unknown function (DUF3372) ECB94_26215 PF03714 Bacterial pullanase-associated domain ECB94_26215 PF18494 Pullulanase Ins domain ECB94_26215 PF17967 Pullulanase N2 domain ECB94_26255 PF05762 VWA domain containing CoxE-like protein ECB94_26260 PF17868 AAA lid domain ECB94_26260 PF12592 Protein of unknown function (DUF3763) ECB94_26260 PF07728 AAA domain (dynein-related subfamily) ECB94_26265 PF05762 VWA domain containing CoxE-like protein ECB94_26275 PF01212 Beta-eliminating lyase ECB94_26280 PF00034 Cytochrome c ECB94_26285 PF03466 LysR substrate binding domain ECB94_26285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_26310 PF04055 Radical SAM superfamily ECB94_26320 PF00270 DEAD/DEAH box helicase ECB94_26320 PF00271 Helicase conserved C-terminal domain ECB94_26325 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ECB94_26335 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ECB94_26335 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ECB94_26345 PF04336 Acyl carrier protein phosphodiesterase ECB94_26350 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ECB94_26355 PF13533 Biotin-lipoyl like ECB94_26380 PF02896 PEP-utilising enzyme, TIM barrel domain ECB94_26380 PF00391 PEP-utilising enzyme, mobile domain ECB94_26380 PF05524 PEP-utilising enzyme, N-terminal ECB94_26385 PF02734 DAK2 domain ECB94_26390 PF02733 Dak1 domain ECB94_26395 PF00465 Iron-containing alcohol dehydrogenase ECB94_26400 PF00440 Bacterial regulatory proteins, tetR family ECB94_26420 PF00155 Aminotransferase class I and II ECB94_26425 PF02378 Phosphotransferase system, EIIC ECB94_26425 PF00367 phosphotransferase system, EIIB ECB94_26430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ECB94_26430 PF00356 Bacterial regulatory proteins, lacI family ECB94_26435 PF07969 Amidohydrolase family ECB94_26440 PF01810 LysE type translocator ECB94_26445 PF12833 Helix-turn-helix domain ECB94_26450 PF00158 Sigma-54 interaction domain ECB94_26450 PF02954 Bacterial regulatory protein, Fis family ECB94_26450 PF00989 PAS fold ECB94_26455 PF01055 Glycosyl hydrolases family 31 ECB94_26460 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_26465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_26475 PF01116 Fructose-bisphosphate aldolase class-II ECB94_26485 PF01263 Aldose 1-epimerase ECB94_26490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ECB94_26490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ECB94_26495 PF00294 pfkB family carbohydrate kinase ECB94_26500 PF08220 DeoR-like helix-turn-helix domain ECB94_26500 PF00455 DeoR C terminal sensor domain ECB94_26545 PF07690 Major Facilitator Superfamily ECB94_26570 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ECB94_26580 PF00171 Aldehyde dehydrogenase family ECB94_26585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ECB94_26600 PF00171 Aldehyde dehydrogenase family ECB94_26605 PF01557 Fumarylacetoacetate (FAA) hydrolase family ECB94_26610 PF01557 Fumarylacetoacetate (FAA) hydrolase family ECB94_26615 PF03328 HpcH/HpaI aldolase/citrate lyase family ECB94_26620 PF01557 Fumarylacetoacetate (FAA) hydrolase family ECB94_26625 PF03480 Bacterial extracellular solute-binding protein, family 7 ECB94_26630 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ECB94_26635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ECB94_26640 PF01047 MarR family ECB94_26645 PF01613 Flavin reductase like domain ECB94_26655 PF00313 'Cold-shock' DNA-binding domain ECB94_26670 PF00970 Oxidoreductase FAD-binding domain ECB94_26670 PF00042 Globin ECB94_26670 PF00175 Oxidoreductase NAD-binding domain ECB94_26675 PF00158 Sigma-54 interaction domain ECB94_26675 PF01590 GAF domain ECB94_26685 PF00958 GMP synthase C terminal domain ECB94_26685 PF00117 Glutamine amidotransferase class-I ECB94_26690 PF00171 Aldehyde dehydrogenase family ECB94_26695 PF00202 Aminotransferase class-III ECB94_26705 PF00171 Aldehyde dehydrogenase family ECB94_26715 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26720 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26725 PF08402 TOBE domain ECB94_26725 PF00005 ABC transporter ECB94_26730 PF13416 Bacterial extracellular solute-binding protein ECB94_26735 PF00202 Aminotransferase class-III ECB94_26740 PF00120 Glutamine synthetase, catalytic domain ECB94_26745 PF00120 Glutamine synthetase, catalytic domain ECB94_26750 PF01266 FAD dependent oxidoreductase ECB94_26755 PF00072 Response regulator receiver domain ECB94_26755 PF01966 HD domain ECB94_26760 PF00512 His Kinase A (phospho-acceptor) domain ECB94_26760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ECB94_26765 PF12849 PBP superfamily domain ECB94_26770 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26775 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26780 PF00005 ABC transporter ECB94_26790 PF08007 Cupin superfamily protein ECB94_26800 PF07670 Nucleoside recognition ECB94_26805 PF07670 Nucleoside recognition ECB94_26810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ECB94_26810 PF00672 HAMP domain ECB94_26810 PF12729 Four helix bundle sensory module for signal transduction ECB94_26815 PF03466 LysR substrate binding domain ECB94_26815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ECB94_26825 PF00005 ABC transporter ECB94_26825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ECB94_26830 PF12911 N-terminal TM domain of oligopeptide transport permease C ECB94_26830 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26835 PF00528 Binding-protein-dependent transport system inner membrane component ECB94_26840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ECB94_26845 PF00990 Diguanylate cyclase, GGDEF domain ECB94_26865 PF13610 DDE domain ECB94_26870 PF00691 OmpA family ECB94_26870 PF13488 Glycine zipper ECB94_26875 PF02368 Bacterial Ig-like domain (group 2) ECB94_26875 PF11999 Protein of unknown function (DUF3494) ECB94_26920 PF13610 DDE domain ECB94_26930 PF13610 DDE domain ECB94_26965 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ECB94_27020 PF04002 RadC-like JAB domain ECB94_27060 PF01464 Transglycosylase SLT domain ECB94_27070 PF18272 single-stranded DNA binding TraI N-terminal subdomain ECB94_27070 PF07057 DNA helicase TraI ECB94_27070 PF18340 DNA relaxase TraI 2B/2B-like domain ECB94_27070 PF08751 TrwC relaxase ECB94_27080 PF10412 Type IV secretion-system coupling protein DNA-binding domain ECB94_27080 PF12615 F sex factor protein N terminal ECB94_27120 PF06986 Type-1V conjugative transfer system mating pair stabilisation ECB94_27135 PF06834 TraU protein ECB94_27140 PF12477 Sex factor F TraW protein N terminal ECB94_27150 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer ECB94_27220 PF02899 Phage integrase, N-terminal SAM-like domain ECB94_27220 PF00589 Phage integrase family ECB94_27235 PF00691 OmpA family ECB94_27265 PF11999 Protein of unknown function (DUF3494) ECB94_27265 PF02368 Bacterial Ig-like domain (group 2) ECB94_27270 PF00691 OmpA family ECB94_27295 PF02368 Bacterial Ig-like domain (group 2) ECB94_27295 PF11999 Protein of unknown function (DUF3494) ECB94_27315 PF01381 Helix-turn-helix ECB94_27510 PF18269 T3SS EscN ATPase C-terminal domain ECB94_27510 PF02874 ATP synthase alpha/beta family, beta-barrel domain ECB94_27510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ECB94_27530 PF00813 FliP family ECB94_27540 PF13610 DDE domain ECB94_27600 PF14319 Transposase zinc-binding domain ECB94_27600 PF04986 Putative transposase ECB94_27625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ECB94_27625 PF00529 HlyD membrane-fusion protein of T1SS ECB94_27630 PF00873 AcrB/AcrD/AcrF family ECB94_27675 PF00486 Transcriptional regulatory protein, C terminal ECB94_27695 PF00771 FHIPEP family ECB94_27700 PF01312 FlhB HrpN YscU SpaS Family ECB94_27730 PF13333 Integrase core domain ECB94_27730 PF00665 Integrase core domain ECB94_27730 PF13276 HTH-like domain